Patents by Inventor Jose Martin SOSA

Jose Martin SOSA has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11904322
    Abstract: The present disclosure provides methods and processes for increasing the efficiency and accuracy of nucleic acid sequencing using techniques such as polymerase chain reaction (PCR). Methods and systems provided herein may facilitate performing reactions such as emulsion PCR (ePCR) on samples comprising nucleic acids and beads. The methods provided herein may provide a higher throughput compared to existing technologies.
    Type: Grant
    Filed: February 16, 2022
    Date of Patent: February 20, 2024
    Assignee: ULTIMA GENOMICS, INC.
    Inventors: Jose Martin Sosa, Joseph Anthony, Nathan Beckett, Gilad Almogy, Chandan Shee, Phillip You Fai Lee, Yuto Watanabe
  • Publication number: 20220168745
    Abstract: The present disclosure provides methods and processes for increasing the efficiency and accuracy of nucleic acid sequencing using techniques such as polymerase chain reaction (PCR). Methods and systems provided herein may facilitate performing reactions such as emulsion PCR (ePCR) on samples comprising nucleic acids and beads. The methods provided herein may provide a higher throughput compared to existing technologies.
    Type: Application
    Filed: February 16, 2022
    Publication date: June 2, 2022
    Inventors: Jose Martin SOSA, Joseph ANTHONY, Nathan BECKETT, Gilad ALMOGY, Chandan SHEE, Phillip You Fai LEE, Yuto WATANABE
  • Publication number: 20220162696
    Abstract: Provided are systems and methods for analyte detection and analysis. A system can comprise an open substrate. The open substrate may be configured to rotate or otherwise move. The open substrate can comprise an array of individually addressable locations, with analytes immobilized thereto. The substrate may be spatially indexed to identify nucleic acid molecules from one or more sources, and/or sequences thereof, with the respective one or more sources. A solution comprising a plurality of probes may be directed across the array to couple at least one of the plurality of probes with at least one of the analytes to form a bound probe. A detector can be configured to detect a signal from the bound probe via scanning of the substrate while minimizing temperature fluctuations of the substrate or optical aberrations caused by bubbles.
    Type: Application
    Filed: December 6, 2021
    Publication date: May 26, 2022
    Inventors: Nathan BECKETT, Gilad ALMOGY, Nathan CASWELL, Jacob A. WOLF, Kristopher BARBEE, Denis PRISTINSKI, Mark PRATT, Gene POLOVY, Osip SCHWARTZ, Stephanie KUBECKA, Steven MENCHEN, Joseph ANTHONY, Jose Martin SOSA, Phillip You Fai LEE
  • Patent number: 11268143
    Abstract: Provided are systems and methods for analyte detection and analysis. A system can comprise an open substrate. The open substrate may be configured to rotate or otherwise move. The open substrate can comprise an array of individually addressable locations, with analytes immobilized thereto. The substrate may be spatially indexed to identify nucleic acid molecules from one or more sources, and/or sequences thereof, with the respective one or more sources. A solution comprising a plurality of probes may be directed across the array to couple at least one of the plurality of probes with at least one of the analytes to form a bound probe. A detector can be configured to detect a signal from the bound probe via scanning of the substrate while minimizing temperature fluctuations of the substrate or optical aberrations caused by bubbles.
    Type: Grant
    Filed: May 5, 2021
    Date of Patent: March 8, 2022
    Assignee: Ultima Genomics, Inc.
    Inventors: Nathan Beckett, Gilad Almogy, Nathan Caswell, Jacob A. Wolf, Kristopher Barbee, Denis Pristinski, Mark Pratt, Gene Polovy, Osip Schwartz, Stephanie Kubecka, Steven Menchen, Joseph Anthony, Jose Martin Sosa, Phillip You Fai Lee
  • Publication number: 20220064727
    Abstract: Provided are systems and methods for analyte detection and analysis. A system can comprise an open substrate. The open substrate may be configured to rotate or otherwise move. The open substrate can comprise an array of individually addressable locations, with analytes immobilized thereto. The substrate may be spatially indexed to identify nucleic acid molecules from one or more sources, and/or sequences thereof, with the respective one or more sources. A solution comprising a plurality of probes may be directed across the array to couple at least one of the plurality of probes with at least one of the analytes to form a bound probe. A detector can be configured to detect a signal from the bound probe via scanning of the substrate while minimizing temperature fluctuations of the substrate or optical aberrations caused by bubbles.
    Type: Application
    Filed: September 14, 2021
    Publication date: March 3, 2022
    Inventors: Gilad Almogy, Nathan Beckett, Jacob A. Wolf, Nathan Caswell, Joseph Anthony, Jose Martin Sosa, Phillip Lee, Stephanie Kubecka
  • Patent number: 11155868
    Abstract: Provided are systems and methods for analyte detection and analysis. A system can comprise an open substrate. The open substrate may be configured to rotate or otherwise move. The open substrate can comprise an array of individually addressable locations, with analytes immobilized thereto. The substrate may be spatially indexed to identify nucleic acid molecules from one or more sources, and/or sequences thereof, with the respective one or more sources. A solution comprising a plurality of probes may be directed across the array to couple at least one of the plurality of probes with at least one of the analytes to form a bound probe. A detector can be configured to detect a signal from the bound probe via scanning of the substrate while minimizing temperature fluctuations of the substrate or optical aberrations caused by bubbles.
    Type: Grant
    Filed: January 22, 2021
    Date of Patent: October 26, 2021
    Assignee: ULTIMA GENOMICS, INC.
    Inventors: Gilad Almogy, Nathan Beckett, Jacob A. Wolf, Nathan Caswell, Joseph Anthony, Jose Martin Sosa, Phillip Lee, Stephanie Kubecka
  • Publication number: 20210277464
    Abstract: Provided are systems and methods for analyte detection and analysis. A system can comprise an open substrate. The open substrate may be configured to rotate or otherwise move. The open substrate can comprise an array of individually addressable locations, with analytes immobilized thereto. The substrate may be spatially indexed to identify nucleic acid molecules from one or more sources, and/or sequences thereof, with the respective one or more sources. A solution comprising a plurality of probes may be directed across the array to couple at least one of the plurality of probes with at least one of the analytes to form a bound probe. A detector can be configured to detect a signal from the bound probe via scanning of the substrate while minimizing temperature fluctuations of the substrate or optical aberrations caused by bubbles.
    Type: Application
    Filed: May 5, 2021
    Publication date: September 9, 2021
    Inventors: Nathan BECKETT, Gilad ALMOGY, Nathan CASWELL, Jacob A. WOLF, Kristopher BARBEE, Denis PRISTINSKI, Mark PRATT, Gene POLOVY, Osip SCHWARTZ, Stephanie KUBECKA, Steven MENCHEN, Joseph ANTHONY, Jose Martin SOSA, Phillip You Fai LEE
  • Publication number: 20210199647
    Abstract: Provided are systems and methods for analyte detection and analysis. A system can comprise an open substrate. The open substrate may be configured to rotate or otherwise move. The open substrate can comprise an array of individually addressable locations, with analytes immobilized thereto. The substrate may be spatially indexed to identify nucleic acid molecules from one or more sources, and/or sequences thereof, with the respective one or more sources. A solution comprising a plurality of probes may be directed across the array to couple at least one of the plurality of probes with at least one of the analytes to form a bound probe. A detector can be configured to detect a signal from the bound probe via scanning of the substrate while minimizing temperature fluctuations of the substrate or optical aberrations caused by bubbles.
    Type: Application
    Filed: February 22, 2021
    Publication date: July 1, 2021
    Inventors: Nathan BECKETT, Gilad ALMOGY, Nathan CASWELL, Jacob A. WOLF, Kristopher BARBEE, Denis PRISTINSKI, Mark PRATT, Gene POLOVY, Osip SCHWARTZ, Stephanie KUBECKA, Steven MENCHEN, Joseph ANTHONY, Jose Martin SOSA, Phillip You Fai LEE
  • Publication number: 20210139980
    Abstract: Provided are systems and methods for analyte detection and analysis. A system can comprise an open substrate. The open substrate may be configured to rotate or otherwise move. The open substrate can comprise an array of individually addressable locations, with analytes immobilized thereto. The substrate may be spatially indexed to identify nucleic acid molecules from one or more sources, and/or sequences thereof, with the respective one or more sources. A solution comprising a plurality of probes may be directed across the array to couple at least one of the plurality of probes with at least one of the analytes to form a bound probe. A detector can be configured to detect a signal from the bound probe via scanning of the substrate while minimizing temperature fluctuations of the substrate or optical aberrations caused by bubbles.
    Type: Application
    Filed: January 22, 2021
    Publication date: May 13, 2021
    Inventors: Gilad ALMOGY, Nathan BECKETT, Jacob A. WOLF, Nathan CASWELL, Joseph ANTHONY, Jose Martin SOSA, Phillip LEE, Stephanie KUBECKA
  • Publication number: 20210079464
    Abstract: Provided are systems and methods for analyte detection and analysis. A system can comprise an open substrate. The open substrate may be configured to rotate or otherwise move. The open substrate can comprise an array of individually addressable locations, with analytes immobilized thereto. The substrate may be spatially indexed to identify nucleic acid molecules from one or more sources, and/or sequences thereof, with the respective one or more sources. A solution comprising a plurality of probes may be directed across the array to couple at least one of the plurality of probes with at least one of the analytes to form a bound probe. A detector can be configured to detect a signal from the bound probe via scanning of the substrate while minimizing temperature fluctuations of the substrate or optical aberrations caused by bubbles.
    Type: Application
    Filed: November 19, 2020
    Publication date: March 18, 2021
    Inventors: Nathan BECKETT, Gilad ALMOGY, Nathan CASWELL, Jacob A. WOLF, Kristopher BARBEE, Denis PRINTINSKI, Mark PRATT, Gene POLOVY, Osip SCHWARTZ, Stephanie KUBECKA, Steven MENCHEN, Joseph ANTHONY, Jose Martin SOSA, Phillip You Fai LEE
  • Patent number: 10900078
    Abstract: Provided are systems and methods for analyte detection and analysis. A system can comprise an open substrate. The open substrate may be configured to rotate or otherwise move. The open substrate can comprise an array of individually addressable locations, with analytes immobilized thereto. The substrate may be spatially indexed to identify nucleic acid molecules from one or more sources, and/or sequences thereof, with the respective one or more sources. A solution comprising a plurality of probes may be directed across the array to couple at least one of the plurality of probes with at least one of the analytes to form a bound probe. A detector can be configured to detect a signal from the bound probe via scanning of the substrate while minimizing temperature fluctuations of the substrate or optical aberrations caused by bubbles.
    Type: Grant
    Filed: June 19, 2019
    Date of Patent: January 26, 2021
    Assignee: Ultima Genomics, Inc.
    Inventors: Gilad Almogy, Nathan Beckett, Jacob A. Wolf, Nathan Caswell, Joseph Anthony, Jose Martin Sosa, Phillip Lee, Stephanie Kubecka
  • Publication number: 20200291469
    Abstract: Provided are systems and methods for analyte detection and analysis. A system can comprise an open substrate. The open substrate may be configured to rotate or otherwise move. The open substrate can comprise an array of individually addressable locations, with analytes immobilized thereto. The substrate may be spatially indexed to identify nucleic acid molecules from one or more sources, and/or sequences thereof, with the respective one or more sources. A solution comprising a plurality of probes may be directed across the array to couple at least one of the plurality of probes with at least one of the analytes to form a bound probe. A detector can be configured to detect a signal from the bound probe via scanning of the substrate while minimizing temperature fluctuations of the substrate or optical aberrations caused by bubbles.
    Type: Application
    Filed: June 19, 2019
    Publication date: September 17, 2020
    Inventors: Gilad ALMOGY, Nathan BECKETT, Jacob A. WOLF, Nathan CASWELL, Joseph ANTHONY, Jose Martin SOSA, Phillip LEE, Stephanie KUBECKA
  • Patent number: D956263
    Type: Grant
    Filed: July 2, 2020
    Date of Patent: June 28, 2022
    Assignee: Ultima Genomics, Inc.
    Inventors: Nathan Beckett, Joseph Anthony, Phillip You Fai Lee, Jose Martin Sosa