Patents by Inventor Joseph A. Walder

Joseph A. Walder has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20080038724
    Abstract: The invention provides compositions and methods for amplifying nucleic acid polymer sequences in a high complexity nucleic acid sample. The unique compositions of the invention include a primer set composed of a mixture of two types of primers for DNA synthesis. For extension in one direction, the primers all contain modifications that destroy their ability to serve as templates that can be copied by DNA polymerases. For extension in the opposite direction the set includes at least one primer that can serve as a template and be replicated by DNA polymerases throughout its length. The method can be carried out by mixing the nucleic acid polymer sequence of interest with the set of DNA synthesis primers in an amplification reaction mixture. The reaction mixture is then subjected to temperature cycling analogous to the temperature cycling in PCR reactions. At least one primer in the primer set hybridizes to the nucleic acid polymer.
    Type: Application
    Filed: August 2, 2004
    Publication date: February 14, 2008
    Inventors: Mark Behlke, Joseph Walder, Jeffrey Manthey
  • Publication number: 20070218490
    Abstract: The invention provides nucleic acid monomers with a 2?-modification that are useful for the incorporation of dyes or blocking groups. The monomers can be incorporated on the 3?-end of a dual labeled probe to inhibit PCR polymerase extension during PCR. The polymerase is inhibited from extending the probe at the 3?-hydroxyl group when the monomer is present; there is no need to add a chemical moiety to the 3?-hydroxyl or remove the 3?-hydroxyl. The monomers can also be incorporated internally or at the 5?-end of the oligonucleotide. A detectable label, such as a fluorescent or quenching dye, can be incorporated on the 2?-position of such monomers.
    Type: Application
    Filed: March 15, 2007
    Publication date: September 20, 2007
    Applicant: INTEGRATED DNA TECHNOLOGIES, INC.
    Inventors: Andrei Laikhter, Joseph Walder, Mark Behlke
  • Publication number: 20060263816
    Abstract: The invention provides a novel method of labeling oligonucleotides, with reporter moieties, including but not limited to, quenchers, fluorophores, biotin, digoxigenin, peptides and proteins. In addition, this invention provides a method of detecting hybridization of oligonucleotides. This invention also provides novel azo quenchers having the general formula shown below. The invention further provides compositions comprising labeled oligonucleotides and solid supports. The invention also provides kits comprising at least one composition of the present invention.
    Type: Application
    Filed: May 22, 2006
    Publication date: November 23, 2006
    Applicant: Integrated DNA Technologies, Inc.
    Inventors: Andrei Laikhter, Joseph Walder, Mark Behlke, Mikhail Podyminogin
  • Patent number: 7074289
    Abstract: A method for preparing laminating materials and a composite prepared therefrom, the method including providing at least one layer of interleaf, extruding a thermoplastic adhesive with a die, forming a composite by applying the at least one layer of interleaf to the adhesive before cooling the adhesive, and pressing the composite with rolls to adhere the at least one layer of interleaf to the adhesive.
    Type: Grant
    Filed: May 1, 2002
    Date of Patent: July 11, 2006
    Inventors: Anthony Joseph Walder, Richard Allen Barnes, James Michael Touchette
  • Publication number: 20050255486
    Abstract: The invention provides compositions and methods for amplifying nucleic acid polymer sequences in a high complexity nucleic acid sample. The unique compositions of the invention include a primer set composed of a mixture of two types of primers for DNA synthesis. For extension in one direction, the primers all contain modifications that destroy their ability to serve as templates that can be copied by DNA polymerases. For extension in the opposite direction the set includes at least one primer that can serve as a template and be replicated by DNA polymerases throughout its length. The method can be carried out by mixing the nucleic acid polymer sequence of interest with the set of DNA synthesis primers in an amplification reaction mixture. The reaction mixture is then subjected to temperature cycling analogous to the temperature cycling in PCR reactions. At least one primer in the primer set hybridizes to the nucleic acid polymer.
    Type: Application
    Filed: August 2, 2004
    Publication date: November 17, 2005
    Inventors: Mark Behlke, Joseph Walder, Jeffrey Manthey
  • Publication number: 20050112673
    Abstract: Disclosed is a group of azo quencher compositions useful as fluorescence quenchers having the general structure of formula 1, methods of making or using the compositions, and kits comprising the composition.
    Type: Application
    Filed: November 12, 2004
    Publication date: May 26, 2005
    Applicant: Integrated DNA Technologies, Inc.
    Inventors: Andrei Laikhter, Mark Behlke, Joseph Walder, Kevin Roberts, Yawfui Yong
  • Publication number: 20030205314
    Abstract: A method for preparing laminating materials and a composite prepared therefrom, the method including providing at least one layer of interleaf, extruding a thermoplastic adhesive with a die, forming a composite by applying the at least one layer of interleaf to the adhesive before cooling the adhesive, and pressing the composite with rolls to adhere the at least one layer of interleaf to the adhesive.
    Type: Application
    Filed: May 1, 2002
    Publication date: November 6, 2003
    Inventors: Anthony Joseph Walder, Richard Allen Barnes, James Michael Touchette
  • Patent number: 6197944
    Abstract: The use of oligodeoxynucleotides modified at the 3′-terminal internucleotide link as therapeutic agents by a method of hybridizing the modified oligonucleotide to a complementary sequence within a targeted mRNA and cleaving the mRNA within the RNA-DNA helix by the enzyme RNaseH to block the expression of the corresponding gene.
    Type: Grant
    Filed: June 29, 1994
    Date of Patent: March 6, 2001
    Assignee: Integrated DNA Technologies, Inc.
    Inventors: Joseph A. Walder, Roxanne Y. Walder, Paul S. Eder, John M. Dagle
  • Patent number: 5962425
    Abstract: The use of oligodeoxynucleotides modified at the 3'-terminal internucleotide link as therapeutic agents by a method of hybridizing the modified oligonucleotide to a complementary sequence within a targeted mRNA and cleaving the mRNA within the RNA-DNA helix by the enzyme RNaseH to block the expression of the corresponding gene.
    Type: Grant
    Filed: June 2, 1995
    Date of Patent: October 5, 1999
    Assignee: University of Iowa Research Foundation
    Inventors: Joseph A. Walder, Roxanne Y. Walder, Paul S. Eder, John M. Dagle
  • Patent number: 5491133
    Abstract: The use of oligodeoxynucleotides modified at the 3'-terminal internucleotide link as therapeutic agents by a method of hybridizing the modified oligonucleotide to a complementary sequence within a targeted mRNA and cleaving the mRNA within the RNA-DNA helix by the enzyme RNaseH to block the expression of the corresponding gene.
    Type: Grant
    Filed: March 19, 1991
    Date of Patent: February 13, 1996
    Assignee: University of Iowa Research Foundation
    Inventors: Joseph A. Walder, Roxanne Y. Walder, Paul S. Eder, John M. Dagle
  • Patent number: 5403711
    Abstract: A method of detection of nucleic acid (DNA or RNA) target sequence in which such a sequence serves as a cofactor for a catalytic reaction in which a complementary, labeled nucleic acid probe is cleaved such that the target sequence is released intact and can repeatedly recycle through the reaction pathway, thereby providing signal amplification.
    Type: Grant
    Filed: July 6, 1993
    Date of Patent: April 4, 1995
    Assignee: University of Iowa Research Foundation
    Inventors: Joseph A. Walder, Roxanne Y. Walder
  • Patent number: 4600531
    Abstract: A high yield method of production of a cross-linked hemoglobin derivative suitable for use as a blood substitute and plasma expander which is cross-linked between Lys 99 Alpha.sub.1 and Lys 99 Alpha.sub.2 in high percentage by adding the cross-linker in the presence of an added polyanion which blocks competing reactions at other sites of the protein.
    Type: Grant
    Filed: March 18, 1985
    Date of Patent: July 15, 1986
    Assignee: University of Iowa Research Foundation
    Inventor: Joseph A. Walder
  • Patent number: 4598064
    Abstract: Blood substitute and blood plasma expanders comprising alpha-alpha cross-linked stroma-free hemoglobin, which is substantially free of hemoglobin derivatives modified at other sites. The hemoglobin composition is intramolecularly cross-linked between Lys 99 Alpha.sub.1 and Lys 99 Alpha.sub.2.
    Type: Grant
    Filed: June 27, 1984
    Date of Patent: July 1, 1986
    Assignee: University of Iowa Research Foundation
    Inventor: Joseph A. Walder
  • Patent number: RE34271
    Abstract: A high yield method of production of a cross-linked hemoglobin derivative suitable for use as a blood substitute and plasma expander which is cross-linked between Lys 99 Alpha.sub.1 and Lys 99 Alpha.sub.2 in high percentage by adding the cross-linker in the presence of an added polyanion which blocks competing reactions at other sites of the protein.
    Type: Grant
    Filed: May 24, 1990
    Date of Patent: June 1, 1993
    Assignee: University of Iowa Research Foundation
    Inventor: Joseph A. Walder