Abstract: A fingerprint secure element (SE) module, having: a secure element (SE) communicatively connected to a mobile terminal application processor, with a biometric sensor for collecting fingerprints being connected to the secure element (SE), wherein the secure element (SE) includes a non-volatile memory for storing certificate information, user account information and fingerprint information, a fingerprint system management unit connected to the biometric sensor for realizing fingerprint collection, generation and comparison, a file system management unit connected to the non-volatile memory for managing various types of information, a security processing unit conducting core processing, and an algorithm management unit for data encryption and decryption. The fingerprint secure element (SE) module is high in security and high in verification efficiency.