Abstract: A non-transitory computer-readable storage medium storing an information processing program that causes at least one computer to execute a process, the process includes calculating a second index indicating a position of an amino acid on a codon file based on a first index indicating positions of a plurality of codons on the codon file with respect to a plurality of codons having different base sequences indicating the same amino acid; identifying positions of amino acid sequences repeatedly expressed in the codon file based on the second index; and specifying each codon sequence corresponding to a position of each amino acid sequence repeatedly expressed in the codon file as a codon sequence having homology.

Abstract: A computer-readable storage medium storing a program for causing a computer to perform processing including: obtaining pieces of segmented genome data being genome information of a specific individual; generating pieces of segmented codon data obtained by encoding each of the pieces of segmented genome data in a codon unit based on a table in which a codon is associated with a code; identifying, based on reference codon data obtained by encoding reference genome data to be a reference in the codon unit and each of the pieces of segmented codon data, a type and a position of an appearance of gene mutation different from the code in the reference codon data among the codes in the pieces of segmented codon data; and generating a gene mutation inverted index in which the gene mutation and the type and position of the appearance of the gene mutation are associated with each other.

Abstract: An evaluation method for a computer to execute a process includes acquiring first base sequence data; generating second base sequence data by shifting positions of bases included in the first base sequence data; specifying a first partial base sequence that includes a base in which it is estimated that a genetic mutation is caused; generating a second plurality of partial base sequences by dividing bases included in certain base sequence data from a reference position on the certain base sequence data according to the certain rule; and evaluating the first base sequence data according to an appearance state in which an arrangement of the first partial base sequence and a second partial base sequence that has a certain positional relationship with the first partial base sequence appears in the second plurality of partial base sequences.

Abstract: Provided is an approach for differentially determining the histological type of a lung cancer lesion objectively and rapidly with high accuracy. A method for differentially assessing a lesion in a lung cancer patient as squamous cell carcinoma or adenocarcinoma, comprising a step of measuring an expression level of an expression product of at least one DNA comprising a transcription start site in a biological sample collected from the lesion, wherein the DNA comprises a base at an arbitrary position in the transcription start site and at least one or more bases located immediately downstream thereof in any of nucleotide sequences represented by SEQ ID NOs: 1 to 213, and the transcription start site is a region wherein both ends thereof are defined by the first base and the 101st base counted from the 3? end in any of the nucleotide sequences represented by SEQ ID NOs: 1 to 213.

Abstract: Provided is an approach for differentially determining the histological type of a lung cancer lesion objectively and rapidly with high accuracy. A method for differentially assessing a lesion in a lung cancer patient as squamous cell carcinoma or adenocarcinoma, comprising a step of measuring an expression level of an expression product of at least one DNA comprising a transcription start site in a biological sample collected from the lesion, wherein the DNA comprises a base at an arbitrary position in the transcription start site and at least one or more bases located immediately downstream thereof in any of nucleotide sequences represented by SEQ ID NOs: 1 to 213, and the transcription start site is a region wherein both ends thereof are defined by the first base and the 101st base counted from the 3? end in any of the nucleotide sequences represented by SEQ ID NOs: 1 to 213.