Patents by Inventor Karl Hecker

Karl Hecker has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 10655170
    Abstract: Methods of coupling adaptors to a target nucleic acid include coupling a first adaptor to a first end of the target nucleic acid to form a coupled first adaptor. A portion of a second adaptor is hybridized to a portion of the coupled first adaptor to form a hybridized second adaptor having a single-stranded 3?-end. The hybridized second adaptor is coupled to a second end of the target nucleic acid to form an adaptor-flanked product having at least a part of the first adaptor coupled to the first end of the target nucleic acid and at least a part of the second adaptor coupled to the second end of the target nucleic acid. These methods can minimize the formation of adaptor-dimers that may be problematic in subsequent complementary nucleic acid strand synthesis, amplification, and sequencing.
    Type: Grant
    Filed: July 5, 2017
    Date of Patent: May 19, 2020
    Assignee: Takara Bio USA, Inc.
    Inventors: Konstantinos Charizanis, Marta Gonzalez-Hernandez, Amanda McNulty, Karl Hecker, Emmanuel Kamberov, John Langmore
  • Publication number: 20190203196
    Abstract: The invention provides methods of preparing nucleic acids, such as RNA molecules, of a defined size or range of sizes. The invention provides compositions, methods and kits for use in the production and preparation of small RNA molecules (including without limitation micro-RNA, siRNA, d-siRNA and e-siRNA) and other nucleic acids of various sizes.
    Type: Application
    Filed: November 30, 2018
    Publication date: July 4, 2019
    Inventors: Knut MADDEN, Adam Harris, Karl Hecker, Byung-In Lee
  • Publication number: 20180073009
    Abstract: The invention provides methods of preparing nucleic acids, such as RNA molecules, of a defined size or range of sizes. The invention provides compositions, methods and kits for use in the production and preparation of small RNA molecules (including without limitation micro-RNA, siRNA, d-siRNA and e-siRNA) and other nucleic acids of various sizes.
    Type: Application
    Filed: September 21, 2017
    Publication date: March 15, 2018
    Inventors: Knut MADDEN, Adam HARRIS, Karl HECKER, Byung-In LEE
  • Publication number: 20180010178
    Abstract: Methods of coupling adaptors to a target nucleic acid include coupling a first adaptor to a first end of the target nucleic acid to form a coupled first adaptor. A portion of a second adaptor is hybridized to a portion of the coupled first adaptor to form a hybridized second adaptor having a single-stranded 3?-end. The hybridized second adaptor is coupled to a second end of the target nucleic acid to form an adaptor-flanked product having at least a part of the first adaptor coupled to the first end of the target nucleic acid and at least a part of the second adaptor coupled to the second end of the target nucleic acid. These methods can minimize the formation of adaptor-dimers that may be problematic in subsequent complementary nucleic acid strand synthesis, amplification, and sequencing.
    Type: Application
    Filed: July 5, 2017
    Publication date: January 11, 2018
    Inventors: Konstantinos Charizanis, Marta Gonzalez-Hernandez, Amanda McNulty, Karl Hecker, Emmanuel Kamberov, John Langmore
  • Publication number: 20160215281
    Abstract: Disclosed are rapid and reproducible methods for separating and purifying nucleic acids from paraffin-containing tissue samples. The disclosed methods involve a melting step, where paraffin-containing tissue samples are heated in the presence of a detergent, causing the paraffin to melt and tissue sample cells to lyse. From the resulting two-phase mixture (i.e., a paraffin phase and an aqueous phase), the aqueous phase is collected for purification of nucleic acid. Protease(s) can be used at one or more points in the separation process to facilitate tissue cell lysis and/or degrade proteins that could degrade nucleic acid or interfere with subsequent genetic manipulation or analysis.
    Type: Application
    Filed: January 21, 2016
    Publication date: July 28, 2016
    Inventors: Song-Hua KE, Craig BRANCH, Jun LEE, Todd Peterson, Karl HECKER
  • Patent number: 9243241
    Abstract: Disclosed are rapid and reproducible methods for separating and purifying nucleic acids from paraffin-containing tissue samples. The disclosed methods involve a melting step, where paraffin-containing tissue samples are heated in the presence of a detergent, causing the paraffin to melt and tissue sample cells to lyse. From the resulting two-phase mixture (i.e., a paraffin phase and an aqueous phase), the aqueous phase is collected for purification of nucleic acid. Protease(s) can be used at one or more points in the separation process to facilitate tissue cell lysis and/or degrade proteins that could degrade nucleic acid or interfere with subsequent genetic manipulation or analysis.
    Type: Grant
    Filed: May 31, 2006
    Date of Patent: January 26, 2016
    Assignee: Life Technologies Corporation
    Inventors: Song-Hua Ke, Karl Hecker
  • Publication number: 20140142290
    Abstract: The invention provides methods of preparing nucleic acids, such as RNA molecules, of a defined size or range of sizes. The invention provides compositions, methods and kits for use in the production and preparation of small RNA molecules (including without limitation micro-RNA, siRNA, d-siRNA and e-siRNA) and other nucleic acids of various sizes.
    Type: Application
    Filed: September 16, 2013
    Publication date: May 22, 2014
    Applicant: LIFE TECHNOLOGIES CORPORATION
    Inventors: Knut MADDEN, Adam Harris, Karl Hecker, Byung-In Lee
  • Publication number: 20070128634
    Abstract: Disclosed are rapid and reproducible methods for separating and purifying nucleic acids from paraffin-containing tissue samples. The disclosed methods involve a melting step, where paraffin-containing tissue samples are heated in the presence of a detergent, causing the paraffin to melt and tissue sample cells to lyse. From the resulting two-phase mixture (i.e., a paraffin phase and an aqueous phase), the aqueous phase is collected for purification of nucleic acid. Protease(s) can be used at one or more points in the separation process to facilitate tissue cell lysis and/or degrade proteins that could degrade nucleic acid or interfere with subsequent genetic manipulation or analysis.
    Type: Application
    Filed: October 23, 2006
    Publication date: June 7, 2007
    Applicant: INVITROGEN CORPORATION
    Inventors: Song-Hua Ke, Karl Hecker, Craig Branch
  • Publication number: 20070026432
    Abstract: Disclosed are rapid and reproducible methods for separating and purifying nucleic acids from paraffin-containing tissue samples. The disclosed methods involve a melting step, where paraffin-containing tissue samples are heated in the presence of a detergent, causing the paraffin to melt and tissue sample cells to lyse. From the resulting two-phase mixture (i.e., a paraffin phase and an aqueous phase), the aqueous phase is collected for purification of nucleic acid. Protease(s) can be used at one or more points in the separation process to facilitate tissue cell lysis and/or degrade proteins that could degrade nucleic acid or interfere with subsequent genetic manipulation or analysis.
    Type: Application
    Filed: May 31, 2006
    Publication date: February 1, 2007
    Applicant: Invitrogen Corporation
    Inventors: Song-Hua Ke, Karl Hecker
  • Publication number: 20050054847
    Abstract: The invention provides methods of preparing nucleic acids, such as RNA molecules, of a defined size or range of sizes. The invention provides compositions, methods and kits for use in the production and preparation of small RNA molecules (including without limitation micro-RNA, siRNA, d-siRNA and e-siRNA) and other nucleic acids of various sizes.
    Type: Application
    Filed: July 30, 2004
    Publication date: March 10, 2005
    Applicant: Invitrogen Corporation
    Inventors: Knut Madden, Adam Harris, Karl Hecker, Byung-in Lee