Patents by Inventor Katie SIDDLE

Katie SIDDLE has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Amplicon-based sequencing using dna spike-ins
    Patent number: 12545952
    Abstract: Embodiments disclosed herein provide methods of using synthetic DNA spike-ins (SDSIs) to detect, prevent, and quantify contamination in amplicon sequencing. These embodiments may, but are not limited to, reveal sample swaps, intra-batch contamination, and, on a larger scale, intra-laboratory contamination. Embodiments disclosed herein also provide synthetic DNA spike-ins for use in amplicon-based sequencing methods.
    Type: Grant
    Filed: March 1, 2022
    Date of Patent: February 10, 2026
    Assignees: The Broad Institute, Inc., President and Fellows of Harvard College
    Inventors: Pardis Sabeti, Bronwyn Macinnis, Erica Normandin, Katie Siddle, Steven Reilly, Matthew Bauer, Kim Lagerborg
  • AMPLICON-BASED SEQUENCING USING DNA SPIKE-INS
    Publication number: 20220282321
    Abstract: Embodiments disclosed herein provide methods of using synthetic DNA spike-ins (SDSIs) to detect, prevent, and quantify contamination in amplicon sequencing. These embodiments may, but are not limited to, reveal sample swaps, intra-batch contamination, and, on a larger scale, intra-laboratory contamination. Embodiments disclosed herein also provide synthetic DNA spike-ins for use in amplicon-based sequencing methods.
    Type: Application
    Filed: March 1, 2022
    Publication date: September 8, 2022
    Inventors: Pardis SABETI, Bronwyn MACINNIS, Erica NORMANDIN, Katie SIDDLE, Steven REILLY, Matthew BAUER, Kim LAGERBORG