Patents by Inventor Kenan BOZHUEYUEK

Kenan BOZHUEYUEK has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11643643
    Abstract: The present invention pertains to a novel architecture of non-ribosomal peptide synthases (NRPS). The invention provides artificial NRPS wherein the naturally occurring terminal condensation or thioesterase-domain is replaced by internal condensation or dual condensation/epimerization domains. Moreover, the present invention enables the portability of terminal condensation domains to unrelated NRPS in respect of peptide release of linear peptides. The replacement results in a product independent release of the synthesized product and therefore enables the rational design of NRPS. The invention provides the new NRPS, nucleic acids encoding them, methods for artificial NRPS generation, and methods for producing non-ribosomal peptides.
    Type: Grant
    Filed: February 8, 2017
    Date of Patent: May 9, 2023
    Assignee: Johann Wolfgang Goethe-Universität Frankfurt am Main
    Inventors: Helge B. Bode, Kenan Bozhüyük, Florian Fleischhacker
  • Publication number: 20220403363
    Abstract: The invention relates to a system for expressing nonribosomal peptide synthetases (NRPSs), polyketide synthases (PKS) or NRPS/PKS hybrid synth(et)ases. NRPS, PKS or hybrids thereof are large multi-domain proteins or multi-domain complexes, the expression of which for the production of peptides often causes difficulties. The invention correspondingly relates to a system for expressing portions of the enzymes which can be assembled post-translationally via protein-protein interactions, introduced in a targeted manner, to form multi-enzyme complexes. The invention discloses protein fragments of such an assembly, and the nucleic acids coding therefor. The invention also relates to a vector system for the protein fragments of the invention and its use for producing functional NRPS/PKS enzyme complexes.
    Type: Application
    Filed: November 12, 2020
    Publication date: December 22, 2022
    Applicant: JOHANN WOLFGANG GOETHE-UNIVERSITÄT FRANKFURT AM MAIN
    Inventors: Helge BODE, Kenan BOZHÜYÜK, Jonas WATZEL
  • Patent number: 11473078
    Abstract: The present invention concerns a novel method for the modification and/or custom-made design of artificial non-ribosomal peptide synthetases (NRPSs) from naturally available NRPSs. The artificial NRPSs are of predetermined length and amino acid composition and sequence. Via fusion of well-defined NRPS units (so-called “exchange units”) in a certain manner, using a specific sequence motif in the linker areas it is possible to construct artificial and/or modified NRPS assembly lines, which have the ability of synthesizing peptides of a desired structure.
    Type: Grant
    Filed: July 6, 2016
    Date of Patent: October 18, 2022
    Assignee: JOHANN WOLFGANG GOETHE-UNIVERSITAT
    Inventors: Claus-Peter Niesert, Helge B. Bode, Kenan Bozhueyuek, Florian Fleischhacker
  • Publication number: 20200347428
    Abstract: The present invention pertains to a system for the assembly and modification of non-ribosomal peptide synthases (NRPS). The system uses novel well defined building blocks (units) comprising condensation subdomains. This strategy allows for the efficient combination of assembly units referred to as eXchange Units (XU2.0) independent on their natural occurring specificity for the subsequent NRPS adenylation domain. The system of the invention allows for the easy assembly of NRPS having any amino acid sequence of choice, without any restrictions due to natural occurring NRPS units. The system also allows the exchange of natural NRPS building blocks with the inventive XU2.0 leading to the production of modified peptides. The invention provides the system, their individual exchange units, nucleic acids encoding these units, as well as methods and uses thereof.
    Type: Application
    Filed: January 15, 2019
    Publication date: November 5, 2020
    Applicant: Johann Wolfgang Geothe-Universität Frankfurt am Main
    Inventors: Helge B. Bode, Kenan Bozhüyük, Annabell Linck
  • Publication number: 20200181598
    Abstract: The present invention pertains to a novel architecture of non-ribosomal peptide synthases (NRPS). The invention provides artificial NRPS wherein the naturally occurring terminal condensation or thioesterase-domain is replaced by internal condensation or dual condensation/epimerization domains. Moreover, the present invention enables the portability of terminal condensation domains to unrelated NRPS in respect of peptide release of linear peptides. The replacement results in a product independent release of the synthesized product and therefore enables the rational design of NRPS. The invention provides the new NRPS, nucleic acids encoding them, methods for artificial NRPS generation, and methods for producing non-ribosomal peptides.
    Type: Application
    Filed: February 8, 2017
    Publication date: June 11, 2020
    Inventors: Helge B. BODE, Kenan BOZHÜYÜK, Florian FLEISCHHACKER
  • Publication number: 20180230449
    Abstract: The present invention concerns a novel method for the modification and/or custom-made design of artificial non-ribosomal peptide synthetases (NRPSs) from naturally available NRPSs. The artificial NRPSs are of predetermined length and amino acid composition and sequence. Via fusion of well-defined NRPS units (so-called “exchange units”) in a certain manner, using a specific sequence motif in the linker areas it is possible to construct artificial and/or modified NRPS assembly lines, which have the ability of synthesizing peptides of a desired structure.
    Type: Application
    Filed: July 6, 2016
    Publication date: August 16, 2018
    Applicant: MERCK PATENT GMBH
    Inventors: Claus-Peter NIESERT, Helge B. BODE, Kenan BOZHUEYUEK, Florian FLEISCHHACKER