Patents by Inventor Korkut Uygun

Korkut Uygun has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11917992
    Abstract: The present invention relates to organ perfusion systems that can be used at room temperature. The organ perfusion systems do not comprise a temperature controller. In some embodiments, the organ perfusion systems do not comprise a cleaning device for cleaning the perfusion fluid. The perfusion fluid can comprise Williams' medium E. The organ perfusion systems can be portable and can be used to preserving an organ, preventing ischemic damage in an organ, or recovering an ischemically damaged organ.
    Type: Grant
    Filed: February 12, 2021
    Date of Patent: March 5, 2024
    Assignee: The General Hospital Corporation
    Inventors: Mustafa Korkut Uygun, Bote G. Bruinsma, Maria-Louisa Izamis
  • Publication number: 20230079454
    Abstract: Methods for monitoring the viability of a donor organ before and after transplant based on detection and analysis of whole cells released from the organs.
    Type: Application
    Filed: February 12, 2021
    Publication date: March 16, 2023
    Inventors: Shannon N. Tessier, Mustafa Korkut Uygun, Heidi Yeh, Mehmet Toner, Reinier De Vries
  • Publication number: 20220098548
    Abstract: One aspect of the invention provides a method for harvesting adult cells from an organ. The method includes perfusing the organ with a perfusate and isolating adult cells from the organ, thereby harvesting the adult cells from the organ. Another aspect of the invention provides a method for rehabilitating an organ. The method includes: dividing the organ into a first portion and a second portion, perfusing the first portion with a decellularization medium, isolating adult cells from the second portion, and recellularizing the first portion with a suspension of the adult cells, thereby rehabilitating the organ.
    Type: Application
    Filed: October 1, 2021
    Publication date: March 31, 2022
    Inventors: Martin Yarmush, Basak E. Uygun, Korkut Uygun, Maria-Louisa Izamis, Alejandro Soto-Gutierrez, Herman Tolboom, Hiroshi Yagi, Carley Shulman, Jack Milwid
  • Publication number: 20220095607
    Abstract: This disclosure relates to subnormothermic machine perfusion formulations for ex vivo preservation of allografts, and methods of use thereof.
    Type: Application
    Filed: February 5, 2020
    Publication date: March 31, 2022
    Inventors: Mustafa Korkut Uygun, Laura Burlage, Shannon N. Tessier, Curtis L. Cetrulo, Alexandre G. Lellouch, Reinier Johan De Vries, Mehmet Toner
  • Patent number: 11136553
    Abstract: One aspect of the invention provides a method for harvesting adult cells from an organ. The method includes perfusing the organ with a perfusate and isolating adult cells from the organ, thereby harvesting the adult cells from the organ. Another aspect of the invention provides a method for rehabilitating an organ. The method includes: dividing the organ into a first portion and a second portion, perfusing the first portion with a decellularization medium, isolating adult cells from the second portion, and recellularizing the first portion with a suspension of the adult cells, thereby rehabilitating the organ.
    Type: Grant
    Filed: April 7, 2015
    Date of Patent: October 5, 2021
    Assignees: Massachusetts Institute of Technology, The General Hospital Corporation
    Inventors: Martin Yarmush, Basak E. Uygun, Korkut Uygun, Maria-Louisa Izamis, Alejandro Soto-Gutierrez, Herman Tolboom, Hiroshi Yagi, Carley Shulman, Jack Milwid
  • Publication number: 20210195891
    Abstract: This disclosure is related to methods of preserving biological samples such as organs, and tissue. The present disclosure relates to methods of subzero preservation of biological tissue samples, such as entire organs from mammals, e.g., humans. The present disclosure is based, at least in part, on the discovery that biological tissue samples can be supercooled while minimizing formation of ice crystals by reducing liquid-air interfaces and lowering the melting point of the tissue samples, e.g., organs, or liquid in the tissue samples by use of cryoprotective agents while ensuring uniform distribution of cryoprotective agents throughout the biological sample by using improved perfusion techniques.
    Type: Application
    Filed: May 30, 2019
    Publication date: July 1, 2021
    Inventors: Mustafa Korkut Uygun, Shannon Noella Tessier, Renier Johan de Vries
  • Publication number: 20210161126
    Abstract: The present invention relates to organ perfusion systems that can be used at room temperature. The organ perfusion systems do not comprise a temperature controller. In some embodiments, the organ perfusion systems do not comprise a cleaning device for cleaning the perfusion fluid. The perfusion fluid can comprise Williams' medium E. The organ perfusion systems can be portable and can be used to preserving an organ, preventing ischemic damage in an organ, or recovering an ischemically damaged organ.
    Type: Application
    Filed: February 12, 2021
    Publication date: June 3, 2021
    Inventors: Musfata Korkut Uygun, Bote G. Bruinsma, Maria-Louisa Izamis
  • Patent number: 10918102
    Abstract: The present invention relates to organ perfusion systems that can be used at room temperature. The organ perfusion systems do not comprise a temperature controller. In some embodiments, the organ perfusion systems do not comprise a cleaning device for cleaning the perfusion fluid. The perfusion fluid can comprise Williams' medium E. The organ perfusion systems can be portable and can be used to preserving an organ, preventing ischemic damage in an organ, or recovering an ischemically damaged organ.
    Type: Grant
    Filed: March 13, 2015
    Date of Patent: February 16, 2021
    Assignee: The General Hospital Corporation
    Inventors: Mustafa Korkut Uygun, Bote G. Bruinsma, Maria-Louisa Izamis
  • Publication number: 20200236924
    Abstract: The present invention generally relates to methods and compositions to determine viability of an organ for transplantation and other medical purposes. One aspect of the invention relates to a method for assessing the viability of an organ by measuring the energy parameters to determine the energy level of the organ by determining the stored cellular energy (e.g., ATP levels), and/or energy consumption over a particular time period of viability. The energy parameters can be compared to reference energy parameters as a highly accurate and reliable prediction of viable cell yield, and organ viability. Another aspect of the invention relates methods to preserve or extend the time period of viability of an organ any combination of (i) preservation perfusion of the organ to prevent ischemic damage, (ii) chemical metabolic suppression of the organ e.g., using metabolic suppressants, (iii) metabolic suppression by physical or environmental conditions, e.g., sub-zero non-freezing storage.
    Type: Application
    Filed: December 6, 2019
    Publication date: July 30, 2020
    Applicant: THE GENERAL HOSPITAL CORPORATION
    Inventors: Martin L. Yarmush, Mehmet TONER, Maria-Louisa IZAMIS, Timothy Antonie BERENDSEN, Robert Marius BIEGANSKI, Osman Berk USTA, Basak Elif UYGUN, Mustafa Korkut UYGUN, Sinem PERK
  • Publication number: 20200154697
    Abstract: This disclosure is related to methods of preserving biological samples, organs, and organisms. This disclosure is based, at least in part, on the discovery that in the presence of heterogenous extracellular ice, endothelial cells have improved attachment and viability after preservation, and particularly by uniformly nucleating ice across the microvasculature using ice nucleating agents, the chance of intracelluar ice formation can be significantly reduced.
    Type: Application
    Filed: June 14, 2018
    Publication date: May 21, 2020
    Inventors: Mehmet Toner, Mustafa Korkut Uygun, Shannon N. Tessier, Shannon L. Stott, Lindong Weng, Reinier Johan De Vries, Casie A. Pendexter, Stephanie EJ Cronin
  • Patent number: 10575515
    Abstract: The present invention generally relates to methods and compositions to determine viability of an organ for transplantation and other medical purposes. One aspect of the invention relates to a method for assessing the viability of an organ by measuring the energy parameters to determine the energy level of the organ by determining the stored cellular energy (e.g., ATP levels), and/or energy consumption over a particular time period of viability. The energy parameters can be compared to reference energy parameters as a highly accurate and reliable prediction of viable cell yield, and organ viability. Another aspect of the invention relates methods to preserve or extend the time period of viability of an organ any combination of (i) preservation perfusion of the organ to prevent ischemic damage, (ii) chemical metabolic suppression of the organ e.g., using metabolic suppressants, (iii) metabolic suppression by physical or environmental conditions, e.g., sub-zero non-freezing storage.
    Type: Grant
    Filed: May 4, 2011
    Date of Patent: March 3, 2020
    Assignee: The General Hospital Corporation
    Inventors: Martin L. Yarmush, Mehmet Toner, Maria-Louisa Izamis, Timothy Antonie Berendsen, Robert Marius Bieganski, Osman Berk Usta, Basak Elif Uygun, Mustafa Korkut Uygun, Sinem Perk
  • Publication number: 20150322404
    Abstract: One aspect of the invention provides a method for harvesting adult cells from an organ. The method includes perfusing the organ with a perfusate and isolating adult cells from the organ, thereby harvesting the adult cells from the organ. Another aspect of the invention provides a method for rehabilitating an organ. The method includes: dividing the organ into a first portion and a second portion, perfusing the first portion with a decellularization medium, isolating adult cells from the second portion, and recellularizing the first portion with a suspension of the adult cells, thereby rehabilitating the organ.
    Type: Application
    Filed: April 7, 2015
    Publication date: November 12, 2015
    Applicants: MASSACHUSETTS INSTITUTE OF TECHNOLOGY, THE GENERAL HOSPITAL CORPORATION
    Inventors: Martin Yarmush, Basak E. Uygun, Korkut Uygun, Maria-Louisa Izamis, Alejandro Soto-Gutierrez, Herman Tolboom, Hiroshi Yagi, Carley Shulman, Jack Milwid
  • Publication number: 20140030231
    Abstract: The present invention generally relates to methods and compositions to determine viability of an organ for transplantation and other medical purposes. One aspect of the invention relates to a method for assessing the viability of an organ by measuring the energy parameters to determine the energy level of the organ by determining the stored cellular energy (e.g., ATP levels), and/or energy consumption over a particular time period of viability. The energy parameters can be compared to reference energy parameters as a highly accurate and reliable prediction of viable cell yield, and organ viability. Another aspect of the invention relates methods to preserve or extend the time period of viability of an organ any combination of (i) preservation perfusion of the organ to prevent ischemic damage, (ii) chemical metabolic suppression of the organ e.g., using metabolic suppressants, (iii) metabolic suppression by physical or environmental conditions, e.g., sub-zero non-freezing storage.
    Type: Application
    Filed: May 4, 2011
    Publication date: January 30, 2014
    Applicant: THE GENERAL HOSPITAL CORPORATION
    Inventors: Martin L. Yarmush, Mehmet Toner, Maria-Louisa Izamis, Timothy Antonie Berendsen, Robert Marius Bieganski, Osman Berk Usta, Basak Elif Uygun, Mustafa Korkut Uygun, Sinem Perk
  • Publication number: 20130323708
    Abstract: One aspect of the invention provides a method for harvesting adult cells from an organ. The method includes perfusing the organ with a perfusate and isolating adult cells from the organ, thereby harvesting the adult cells from the organ. Another aspect of the invention provides a method for rehabilitating an organ. The method includes: dividing the organ into a first portion and a second portion, perfusing the first portion with a decellularization medium, isolating adult cells from the second portion, and recellularizing the first portion with a suspension of the adult cells, thereby rehabilitating the organ.
    Type: Application
    Filed: June 30, 2010
    Publication date: December 5, 2013
    Applicants: MASSACHUSETTS INSTITUTE OF TECHNOLOGY, THE GENERAL HOSPITAL CORPORATION
    Inventors: Martin Yarmush, Basak E. Uygun, Mustafa Korkut Uygun, Maria Louisa Izamis, Alejandro Soto-Gutierrez, Herman Tolboom, Hiroshi Yagi, Carley Shulman, John Miles Milwid