Abstract: The present teachings contain a method and system for gene and splice variant identification and display. The teachings employ evidence from various genomic and proteomic databases. The method can be run on a computer system and performs its function by mapping evidence to a genome under study and then collapsing overlapping evidence to form clusters. Various rules are taught that can be used to identify unique transcripts and gene boundaries. Clusters can be displayed visually or in report format. Regardless of format, the evidence leading the cluster definitions can be seen.

Abstract: The present teachings are related to methods for predicting the binding affinity of peptides for proteins. Individual methods for creating predictions and methods for combining predictions are also related. Some embodiments of the present teachings include methods for manufacturing a vaccine and a computer system for implementing the methods of the present teachings.