Patents by Inventor Mark Kokoris

Mark Kokoris has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20230313157
    Abstract: Recombinant DPO4-type DNA polymerase variants with amino acid substitutions that confer modified properties upon the polymerase for improved single molecule sequencing applications are provided. Such properties may include enhanced binding and accurate incorporation of bulky nucleotide analog substrates into daughter strands and the like. Also provided are compositions comprising such DPO4 variants and nucleotide analogs, as well as nucleic acids which encode the polymerases with the aforementioned phenotypes.
    Type: Application
    Filed: November 16, 2022
    Publication date: October 5, 2023
    Inventors: Mark Kokoris, Marc Prindle, Gregory Scott Thiessen, Alexander Isaac Lehmann, Drew Goodman, Aaron Jacobs, John Chase
  • Patent number: 11530392
    Abstract: Recombinant DPO4-type DNA polymerase variants with amino acid substitutions that confer modified properties upon the polymerase for improved single molecule sequencing applications are provided. Such properties may include enhanced binding and accurate incorporation of bulky nucleotide analog substrates into daughter strands and the like. Also provided are compositions comprising such DPO4 variants and nucleotide analogs, as well as nucleic acids which encode the polymerases with the aforementioned phenotypes.
    Type: Grant
    Filed: December 10, 2018
    Date of Patent: December 20, 2022
    Assignee: Stratos Genomics, Inc.
    Inventors: Mark Kokoris, Marc Prindle, Gregory Scott Thiessen, Alexander Isaac Lehmann, Drew Goodman, Aaron Jacobs, John Chase
  • Publication number: 20210163903
    Abstract: Recombinant DPO4-type DNA polymerase variants with amino acid substitutions that confer modified properties upon the polymerase for improved single molecule sequencing applications are provided. Such properties may include enhanced binding and accurate incorporation of bulky nucleotide analog substrates into daughter strands and the like. Also provided are compositions comprising such DPO4 variants and nucleotide analogs, as well as nucleic acids which encode the polymerases with the aforementioned phenotypes.
    Type: Application
    Filed: December 10, 2018
    Publication date: June 3, 2021
    Inventors: Mark KOKORIS, Marc PRINDLE, Gregory Scott Thiessen, Alexander Isaac LEHMANN, Drew GOODMAN, Aaron JACOBS, John CHASE
  • Patent number: 8772017
    Abstract: Integrated microfluidic cartridges for nucleic acid extraction, amplification, and detection from clinical samples are disclosed. The devices are single-entry, sanitary, and disposable. The devices enable simplex or multiplex nucleic acid target detection, as for example: assay panels for multiple infectious agents, or assay panels for cancerous cell types. Methods for use of microfluidic cartridges in a fully automated, pneumatically controlled apparatus are also disclosed.
    Type: Grant
    Filed: June 8, 2012
    Date of Patent: July 8, 2014
    Assignee: Micronics, Inc.
    Inventors: C. Frederick Battrell, John Gerdes, John R. Williford, Denise Maxine Hoekstra, Wayne L. Breidford, Stephen Mordue, John Clemmens, Melud Nabavi, Mark Kokoris
  • Publication number: 20120329142
    Abstract: Integrated microfluidic cartridges for nucleic acid extraction, amplification, and detection from clinical samples are disclosed. The devices are single-entry, sanitary, and disposable. The devices enable simplex or multiplex nucleic acid target detection, as for example: assay panels for multiple infectious agents, or assay panels for cancerous cell types. Methods for use of microfluidic cartridges in a fully automated, pneumatically controlled apparatus are also disclosed.
    Type: Application
    Filed: June 8, 2012
    Publication date: December 27, 2012
    Applicant: MICRONICS, INC.
    Inventors: C. Frederick BATTRELL, John GERDES, John R. WILLIFORD, Denise Maxine HOEKSTRA, Wayne L. BREIDFORD, Stephen MORDUE, John CLEMMENS, Melud NABAVI, Mark KOKORIS
  • Patent number: 8222023
    Abstract: Integrated microfluidic cartridges for nucleic acid extraction, amplification, and detection from clinical samples are disclosed. The devices are single-entry, sanitary, and disposable. The devices enable simplex or multiplex nucleic acid target detection, as for example: assay panels for multiple infectious agents, or assay panels for cancerous cell types. Methods for use of microfluidic cartridges in a fully automated, pneumatically controlled apparatus are also disclosed.
    Type: Grant
    Filed: September 10, 2008
    Date of Patent: July 17, 2012
    Assignee: Micronics, Inc.
    Inventors: C. Frederick Battrell, John Gerdes, John R. Williford, Denise Maxine Hoekstra, Wayne L. Breidford, Stephen Mordue, John Clemmens, Melud Nabavi, Mark Kokoris
  • Publication number: 20090148933
    Abstract: Integrated microfluidic cartridges for nucleic acid extraction, amplification, and detection from clinical samples are disclosed. The devices are single-entry, sanitary, and disposable. The devices enable simplex or multiplex nucleic acid target detection, as for example: assay panels for multiple infectious agents, or assay panels for cancerous cell types. Methods for use of microfluidic cartridges in a fully automated, pneumatically controlled apparatus are also disclosed.
    Type: Application
    Filed: September 10, 2008
    Publication date: June 11, 2009
    Applicant: Micronics, Inc.
    Inventors: C. Frederick Battrell, John Gerdes, John R. Williford, Denise Maxine Hoekstra, Wayne L. Breidford, Stephen Mordue, John Clemmens, Melud Nabavi, Mark Kokoris
  • Publication number: 20090148847
    Abstract: Disclosed is an improvement in methods for nucleic acid and immunological bioassays. The methods comprise a step for “sweeping” paramagnetic bead: target molecule complexes so as to capture them with an affinity capture agent on a test pad by moving a magnetic force field from outside to inside the test pad area so as to bring into contact the paramagnetic complexes with the capture agent, while sweeping any unbound paramagnetic material off the test pad by moving the magnetic field from inside to outside the test pad area. Surprisingly, the paramagnetic complexes are rapidly affinity-extracted from the moving magnetic field.
    Type: Application
    Filed: September 3, 2008
    Publication date: June 11, 2009
    Applicant: MICRONICS, INC.
    Inventors: Mark Kokoris, Melud Nabavi, Wayne L. Breidford, John Gerdes, Stephen Mordue, C. Frederick Battrell
  • Publication number: 20060246575
    Abstract: The present invention relates to microfluidic devices and methods for detecting rare cells. The disclosed microfluidic devices and methods integrate and automate sample preparation, cell labeling, cell sorting and enrichment, and DNA/RNA analysis of sorted cells.
    Type: Application
    Filed: January 13, 2006
    Publication date: November 2, 2006
    Applicant: Micronics, Inc.
    Inventors: Christy Lancaster, C. Battrell, Jason Capodanno, John Gerdes, Mark Kokoris, Melud Nabavi, Stephen Mordue, Robert McRuer, John Clemmens, Wayne Breidford