Patents by Inventor Mathias Uhlen

Mathias Uhlen has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 9416176
    Abstract: The present invention provides means, such as a method, for determining whether a mammalian subject having a colorectal cancer belongs to a first or a second group, wherein the prognosis of subjects of the first group is better than the prognosis of subjects of the second group. The method comprises the steps of: evaluating an amount of RBM3 protein or RBM3 mRNA molecule in at least part of a sample earlier obtained from the subject and determining a sample value corresponding to the evaluated amount; comparing said sample value with a predetermined reference value; and if said sample value is higher than said reference value, concluding that the subject belongs to the first group; and if said sample value is lower than or equal to said reference value, concluding that the subject belongs to the second group.
    Type: Grant
    Filed: April 9, 2014
    Date of Patent: August 16, 2016
    Assignee: Atlas Antibodies AB
    Inventors: Mathias Uhlen, Fredrik Ponten, Karin Jirstrom
  • Publication number: 20150309033
    Abstract: The present disclosure provides a method for determining whether a mammalian subject having a colorectal cancer belongs to a first or a second group, wherein the prognosis of subjects of the first group is better than the prognosis of subjects of the second group, comprising the steps of: a) evaluating an amount of PODXL protein in at least part of a sample earlier obtained from the subject, and determining a sample value corresponding to the evaluated amount; b) comparing said sample value from step a) with a predetermined reference value; and if said sample value is higher than said reference value, c1) concluding that the subject belongs to said second group; and if said sample value is lower than or equal to said reference value, c2) concluding that the subject belongs to said first group. Related uses, means and a method of treatment are also provided.
    Type: Application
    Filed: March 5, 2015
    Publication date: October 29, 2015
    Inventors: Karin Jirstrom, Mathias Uhlen, Fredrik Ponten
  • Patent number: 9063149
    Abstract: This invention relates to a method of determining the absolute amount of a target polypeptide in a sample using mass spectrometry.
    Type: Grant
    Filed: April 4, 2012
    Date of Patent: June 23, 2015
    Assignees: Max-Planck-Gesellschaft zur Förderung der Wissenschaften e.V., ATLAS ANTIBODIES AB
    Inventors: Matthias Mann, Marlis Zeiler, Mathias Uhlen, Emma Lundberg, Werner Lothar Straube
  • Patent number: 8945832
    Abstract: The present invention provides a method for determining whether a mammalian subject having a breast cancer is likely to benefit from an endocrine treatment, comprising the steps of: providing a sample earlier obtained from said subject; evaluating the amount of HMGCR protein or HMGCR mRNA present in at least part of said sample, and determining a sample value corresponding to said amount; comparing the sample value obtained in step b) with a reference value; and, if said sample value is higher than said reference value, concluding that the subject is likely to benefit from an endocrine treatment. Further, a corresponding method of treatment is provided as well as further methods uses and means which may be employed in connection with breast cancer treatment or treatment prediction.
    Type: Grant
    Filed: November 16, 2010
    Date of Patent: February 3, 2015
    Assignee: Atlas Antibodies AB
    Inventors: Mathias Uhlen, Fredrik Ponten, Karin Jirström, Donal J. Brennan
  • Publication number: 20140295462
    Abstract: The present invention provides means, such as a method, for determining whether a mammalian subject having a colorectal cancer belongs to a first or a second group, wherein the prognosis of subjects of the first group is better than the prognosis of subjects of the second group. The method comprises the steps of: evaluating an amount of RBM3 protein or RBM3 mRNA molecule in at least part of a sample earlier obtained from the subject and determining a sample value corresponding to the evaluated amount; comparing said sample value with a predetermined reference value; and if said sample value is higher than said reference value, concluding that the subject belongs to the first group; and if said sample value is lower than or equal to said reference value, concluding that the subject belongs to the second group.
    Type: Application
    Filed: April 9, 2014
    Publication date: October 2, 2014
    Applicant: Atlas Antibodies AB
    Inventors: Mathias Uhlen, Fredrik Ponten, Karin Jirstrom
  • Publication number: 20140072991
    Abstract: The present invention provides a method of determining the absolute amount of a target polypeptide in a sample, said method comprising the following steps: (a) adding (aa) a fusion polypeptide to said sample, said fusion polypeptide comprising (i) at least one tag sequence and (ii) a subsequence of the target polypeptide; and (ab) a known absolute amount of a tag polypeptide comprising or consisting of said tag sequence according to (aa) to said sample, wherein said fusion polypeptide on the one hand is mass-altered as compared to said target polypeptide and said tag polypeptide on the other hand, for example, said fusion polypeptide on the one hand and said target polypeptide and said tag polypeptide on the other hand are differently isotope labeled; (b) performing proteolytic digestion of the mixture obtained in step (a); (c) subjecting the result of proteolytic digestion of step (b), optionally after chromatography, to mass spectrometric analysis; and (d) determining the absolute amount of said target poly
    Type: Application
    Filed: April 4, 2012
    Publication date: March 13, 2014
    Applicants: ATLAS ANTIBODIES AB, Max-Planck-Gesellschaft zur Förderung der Wissenschaften e.V.
    Inventors: Matthias Mann, Marlis Zeiler, Mathias Uhlen, Emma Lundberg, Werner Straube
  • Patent number: 8632984
    Abstract: A method for determining whether a mammalian subject having a malignant melanoma belongs to a first or a second group, wherein the prognosis of subjects of the first group is better than the prognosis of subjects of the second group is provided. The method comprises the steps of: evaluating an amount of RBM3 protein in at least part of a sample earlier obtained from the subject and determining a sample value corresponding to the evaluated amount; comparing said sample value with a predetermined reference value; and if said sample value is higher than said reference value, concluding that the subject belongs to the first group; and if said sample value is lower than or equal to said reference value, concluding that the subject belongs to the second group.
    Type: Grant
    Filed: December 17, 2009
    Date of Patent: January 21, 2014
    Assignee: Atlas Antibodies AB
    Inventors: Mathias Uhlen, Fredrik Ponten, Karin Jirstrom
  • Publication number: 20120269764
    Abstract: A method for determining whether a mammalian subject having a malignant melanoma belongs to a first or a second group, wherein the prognosis of subjects of the first group is better than the prognosis of subjects of the second group is provided. The method comprises the steps of: evaluating an amount of RBM3 protein in at least part of a sample earlier obtained from the subject and determining a sample value corresponding to the evaluated amount; comparing said sample value with a predetermined reference value; and if said sample value is higher than said reference value, concluding that the subject belongs to the first group; and if said sample value is lower than or equal to said reference value, concluding that the subject belongs to the second group.
    Type: Application
    Filed: December 17, 2009
    Publication date: October 25, 2012
    Applicant: Atlas Antibodies AB
    Inventors: Mathias Uhlen, Fredrik Ponten, Karin Jirstrom
  • Publication number: 20120034218
    Abstract: The present invention provides means, such as a method, for determining whether a mammalian subject having a colorectal cancer belongs to a first or a second group, wherein the prognosis of subjects of the first group is better than the prognosis of subjects of the second group. The method comprises the steps of: evaluating an amount of RBM3 protein or RBM3 mRNA molecule in at least part of a sample earlier obtained from the subject and determining a sample value corresponding to the evaluated amount; comparing said sample value with a predetermined reference value; and if said sample value is higher than said reference value, concluding that the subject belongs to the first group; and if said sample value is lower than or equal to said reference value, concluding that the subject belongs to the second group.
    Type: Application
    Filed: August 16, 2011
    Publication date: February 9, 2012
    Inventors: Mathias Uhlen, Fredrik Pontén, Karin Jirström
  • Publication number: 20110158988
    Abstract: The present invention relates to an affinity ligand capable of selective interaction with a subset consisting of 37 consecutive amino acid residues or less from extracellular domains 2 and 3 of HER2, wherein the subset comprises the amino acid sequence LQVF and/or ESFDGD1 and to polypeptides consisting of such subsets.
    Type: Application
    Filed: December 12, 2008
    Publication date: June 30, 2011
    Applicant: ATLAS THERAPEUTICS AB
    Inventors: Mathias Uhlen, Johan Rockberg
  • Publication number: 20110142828
    Abstract: The present invention provides a method for determining whether a mammalian subject having a breast cancer is likely to benefit from an endocrine treatment, comprising the steps of: providing a sample earlier obtained from said subject; evaluating the amount of HMGCR protein or HMGCR mRNA present in at least part of said sample, and determining a sample value corresponding to said amount; comparing the sample value obtained in step b) with a reference value; and, if said sample value is higher than said reference value, concluding that the subject is likely to benefit from an endocrine treatment. Further, a corresponding method of treatment is provided as well as further methods uses and means which may be employed in connection with breast cancer treatment or treatment prediction.
    Type: Application
    Filed: November 16, 2010
    Publication date: June 16, 2011
    Applicant: ATLAS ANTIBODIES AB
    Inventors: Mathias UHLEN, Fredrik PONTEN, Karin JIRSTRÕM, Donal J. Brennan
  • Publication number: 20110021635
    Abstract: The present invention provides means, such as a method, for determining whether a prognosis for a mammalian subject having a breast cancer is better than a reference prognosis. The method comprises the steps of: providing a sample earlier obtained from the subject; evaluating the amount of RBM3 protein present in at least part of said sample, and determining a sample value corresponding to said evaluated amount; comparing the sample value obtained with a reference value associated with said reference prognosis; and, if said sample value is higher than said reference value, concluding that the prognosis for said subject is better than said reference prognosis.
    Type: Application
    Filed: February 16, 2009
    Publication date: January 27, 2011
    Inventors: Mathias Uhlen, Fredrik Ponten, Karin Jirstrom
  • Publication number: 20110003854
    Abstract: The present invention provides a new method and means for determining whether a mammalian subject having a breast cancer is likely to benefit from an endocrine treatment. The method comprise the steps of: providing a sample earlier obtained from said subject; evaluating the amount of CRABP2 protein present in at least part of said sample, and determining a sample value corresponding to said amount; comparing the obtained sample value with a reference value; and, if said sample value is higher than said reference value, concluding that the subject is likely to benefit from an endocrine treatment.
    Type: Application
    Filed: December 16, 2008
    Publication date: January 6, 2011
    Inventors: Fredrik Ponten, Mathias Uhlen, Karin Jirstrom
  • Publication number: 20090220975
    Abstract: The invention provides new methods, means and uses in connection with detection, characterization and prognosis of colo-rectal cancer, via the identification of the SATB2 protein as a marker for this cancer type.
    Type: Application
    Filed: June 4, 2007
    Publication date: September 3, 2009
    Applicant: ATLAS ANTIBODIES AB
    Inventors: Mathias Uhlen, Fredrik Ponten
  • Publication number: 20080233660
    Abstract: The invention provides for the labeling of antibodies with a fluorescent label, using a solid support comprising an affinity for an Fc portion of an antibody. Thus, the invention provides a method for labeling an antibody or fragment thereof with a fluorescent label, comprising the steps of immobilizing an antibody on the solid support and covalently coupling a fluorescent label to the immobilized antibody, as well as a kit for performing such method.
    Type: Application
    Filed: March 20, 2008
    Publication date: September 25, 2008
    Applicant: MU Bioteknik AB
    Inventors: Mathias Uhlen, Helene Andersson Svahn, Emma Lundberg
  • Publication number: 20060035265
    Abstract: The present invention relates to a nucleic acid molecule or a polypeptide that is selected from a method that includes cell-free expression of nucleic acid molecules immobilized on a sold support system. The present invention also relates to a molecular library that has a solid support system having a plurality of nucleic acid molecules immobilized thereon.
    Type: Application
    Filed: October 3, 2005
    Publication date: February 16, 2006
    Inventors: Per-Ake Nygren, Mathias Uhlen, Olof Nord
  • Patent number: 6955877
    Abstract: A method for the selection of one or more desired polypeptides includes cell free expression of nucleic acid molecules immobilized on a solid support system to produce polypeptides. The solid support carrying system is for biospecific interaction with at least the desired polypeptide or a molecule attached thereto. The method also includes separation of the solid support carrying both the desired polypeptide and the nucleic acid encoding it. Finally, the method optionally includes recovery of the nucleic acid and/or the desired polypeptide, and molecular libraries for use in these methods.
    Type: Grant
    Filed: July 20, 2000
    Date of Patent: October 18, 2005
    Assignee: Affibody AB
    Inventors: Per-Ake Nygren, Mathias Uhlen, Olof Nord
  • Publication number: 20050100970
    Abstract: Methods of affinity separation wherein the affinity ligand is immobilized proteinaceous ligand wherein one or more of its asparagine (Asn) residues has been modified. Methods of making a stabilized combinatorial protein by a) modification of Asn residues within a protein molecule to increase stability of the protein in alkaline conditions, and b) randomization of the protein molecule to modify its binding characteristics, and combinatorial proteins wherein in a step separate from the randomization step, the stability of the protein in alkaline conditions has been increased by modifying one or more of its Asn residues.
    Type: Application
    Filed: December 1, 2004
    Publication date: May 12, 2005
    Inventors: Mathias Uhlen, Sophia Hober
  • Publication number: 20040005669
    Abstract: The present invention provides a method of producing an insulin C-peptide, which comprises expressing in a host cell a multimeric polypeptide comprising multiple copies of a said insulin C-peptide, and cleaving said expressed polypeptide to release single copies of the insulin C-peptide.
    Type: Application
    Filed: May 6, 2003
    Publication date: January 8, 2004
    Inventors: Stefan Stahl, Mathias Uhlen, Per-Ake Nygren, Per Jonasson
  • Patent number: 6558924
    Abstract: The present invention provides a method of producing an insulin C-peptide, which comprises expressing in a host cell a multimeric polypeptide comprising multiple copies of the insulin C-peptide, and cleaving the expressed polypeptide to release single copies of the insulin C-peptide. Also provided are nucleic acid molecules, expression vectors and host cells, for use in such a method and the multimeric insulin C-peptide polypeptide expressed and cleaved in such a method.
    Type: Grant
    Filed: February 7, 2000
    Date of Patent: May 6, 2003
    Assignee: Creative Peptides Sweden AB
    Inventors: Stefan Stahl, Mathias Uhlen, Per-Ake Nygren, Per Jonasson