Patents by Inventor Matthew C. Yoshikawa

Matthew C. Yoshikawa has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20040009484
    Abstract: Methods are disclosed for predicting the potential of a hybridization oligonucleotide of length greater than about 20 nucleotides to hybridize to a target nucleotide sequence. The method involves evaluating predictor oligonucleotides based on one or more parameters. A subset of oligonucleotides within the predetermined number of predictor oligonucleotides is selected based on an examination of the parameter and application of a rule that rejects some of the oligonucleotides identified above. Oligonucleotides are identified in the selected subset, viewed according to order of position along the nucleotide sequence, that are in clusters along a region of the nucleotide sequence. The clusters are ranked in order of number of oligonucleotides. A hybridization oligonucleotide is selected for each cluster, in descending order of cluster rank. The selected hybridization oligonucleotide has as its central nucleotide the central nucleotide of a region of the nucleotide sequence that corresponds to the cluster.
    Type: Application
    Filed: July 11, 2002
    Publication date: January 15, 2004
    Inventors: Paul K. Wolber, Matthew C. Yoshikawa, Chao Chen, Stephanie B. Fulmer-Smentek, Karen W. Shannon, Francisco J. Cifuentes