Patents by Inventor Matthew Tobin

Matthew Tobin has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Automated Property Access Control Involving Sequential Call Prompt Interactions Using Multiple Computing Devices
    Publication number: 20240104441
    Abstract: Techniques are described for using computing devices to perform automated operations involving interactions between multiple computing devices and systems as part of automatically scheduling an in-person access to a physical property involving multiple unaffiliated users traveling from disparate locations to the physical property, such as for an access to a house or other building. In some situations, the automated operations include exchanging electronic communications between computing devices to provide multiple sequential telephone call interactions and concurrent in-application interactions with multiple candidate users regarding participation in the group.
    Type: Application
    Filed: September 26, 2023
    Publication date: March 28, 2024
    Inventors: Anurag Bhatnagar, Hiba EL Hassan, Matthew Tobin
  • Automated Property Access Control Involving Inter-Device Electronic Communications Between Computing Devices
    Publication number: 20240104511
    Abstract: Techniques are described for using computing devices to perform automated operations involving interactions between multiple computing devices and systems as part of automatically scheduling an in-person access to a physical property involving multiple unaffiliated users traveling from disparate locations to the physical property, such as for an access to a house or other building. In some situations, the automated operations include exchanging electronic communications between computing devices to provide current property availability information and to receive immediate confirmation of scheduled access to an indicated physical property at an indicated time.
    Type: Application
    Filed: September 26, 2023
    Publication date: March 28, 2024
    Inventors: Anurag Bhatnagar, Hiba EL Hassan, Matthew Tobin
  • EVOLUTION OF WHOLE CELLS AND ORGANISMS BY RECURSIVE SEQUENCE RECOMBINATION
    Publication number: 20120252681
    Abstract: The invention provides methods employing iterative cycles of recombination and selection/screening for evolution of whole cells and organisms toward acquisition of desired properties. Examples of such properties include enhanced recombinogenicity, genome copy number, and capacity for expression and/or secretion of proteins and secondary metabolites.
    Type: Application
    Filed: December 2, 2011
    Publication date: October 4, 2012
    Applicant: CODEXIS MAYFLOWER HOLDINGS, LLC
    Inventors: Stephen del Cardayre, Matthew Tobin, Willem P.C. Stemmer, Jon E. Ness, Jeremy Minshull, Phillip Patten, Venkiteswaran Subramanian, Linda A. Castle, Claus M. Krebber, Steven H. Bass, Ying-Xin Zhang, Tony Cox, Gjalt Huisman, Ling Yuan, Joseph A. Affholter
  • ALANINE 2,3-AMINOMUTASES AND RELATED POLYNUCLEOTIDES
    Publication number: 20120040437
    Abstract: The present disclosure relates generally to polypeptides having improved alanine 2,3-aminomutase (AAM) activity, the polynucleotides encoding the AAM polypeptides, and expression vectors and host cells for expressing the AAM polypeptides.
    Type: Application
    Filed: September 1, 2011
    Publication date: February 16, 2012
    Applicant: CODEXIS, INC.
    Inventors: Svetlana Balatskaya, Birthe Borup, Ranjini Chatterjee, Ish Dhawan, Richard J. Fox, Kenneth W. Mitchell, Emily C. Mundorff, Les Partridge, Matthew Tobin
  • METHODS FOR IDENTIFYING SETS OF OLIGONUCLEOTIDES FOR USE IN AN IN VITRO RECOMBINATION PROCEDURE
    Publication number: 20110257892
    Abstract: In silico nucleic acid recombination methods, related integrated systems utilizing genetic operators and libraries made by in silico shuffling methods are provided.
    Type: Application
    Filed: April 27, 2011
    Publication date: October 20, 2011
    Applicant: CODEXIS MAYFLOWER HOLDINGS, LLC
    Inventors: Sergey A. Selifonov, Willem P.C. Stemmer, Claes Gustafsson, Matthew Tobin, Stephen del Cardayre, Phillip A. Patten, Jeremy Minshull, Lorraine J. Giver
  • Alanine 2,3-aminomutases and related polynucleotides
    Patent number: 8030051
    Abstract: The present disclosure relates generally to polypeptides having improved alanine 2,3-aminomutase (AAM) activity, the polynucleotides encoding the AAM polypeptides, and expression vectors and host cells for expressing the AAM polypeptides.
    Type: Grant
    Filed: October 16, 2006
    Date of Patent: October 4, 2011
    Assignee: Codexis, Inc.
    Inventors: Svetlana Balatskaya, Birthe Borup, Ranjini Chatterjee, Ish Dhawan, Richard J. Fox, Kenneth W. Mitchell, Emily C. Mundorff, Les Partridge, Matthew Tobin
  • Integrated systems and methods for diversity generation and screening
    Patent number: 8014961
    Abstract: Integrated systems and methods for diversity generation and screening are provided. The systems use common fluid and array handling components to provide nucleic acid diversification, transcription, translation, product screening and subsequent diversification reactions.
    Type: Grant
    Filed: February 21, 2007
    Date of Patent: September 6, 2011
    Assignee: Codexis Mayflower Holdings, LLC
    Inventors: Steven H. Bass, Simon Christopher Davis, Phillip A. Patten, Matthew Tobin, Jeremy S. Minshull, Mark Welch, Claus Gustafsson, Brian Carr, Stephan J. Jenne, Sun Ai Raillard, Andreas Crameri, Willem P. C. Stemmer, Robin Emig, Pascal Longchamp, Stanley Goldman, Lorraine J. Giver, Joseph A. Affholter
  • EVOLUTION OF WHOLE CELLS AND ORGANISMS BY RECURSIVE SEQUENCE RECOMBINATION
    Publication number: 20110190140
    Abstract: The invention provides methods employing iterative cycles of recombination and selection/screening for evolution of whole cells and organisms toward acquisition of desired properties. Examples of such properties include enhanced recombinogenicity, genome copy number, and capacity for expression and/or secretion of proteins and secondary metabolites.
    Type: Application
    Filed: October 15, 2009
    Publication date: August 4, 2011
    Applicant: Maxygen, Inc.
    Inventors: Stephen del Cardayre, Matthew Tobin, Willem P.C. Stemmer, Jon E. Ness, Jeremy Minshull, Phillip Patten, Venkiteswatan Subramanian, Linda A. Castle, Claus M. Krebber, Steven H. Bass, Ying-Xin Zhang, Tony Cox, Gjalt Huisman, Ling Yuan, Joseph A. Affholter
  • Methods for identifying and producing polypeptides
    Patent number: 7957912
    Abstract: In silico nucleic acid recombination methods, related integrated systems utilizing genetic operators and libraries made by in silico shuffling methods are provided. One disclosed method involves identifying and producing a polypeptide. The method may involve (a) receiving data identifying sequences of two or more parental polypeptides or parental nucleic acids that encode the polypeptides; (b) selecting one or more cross-over sites on the sequences thereby defining one or more recombinant polypeptides or recombinant nucleic acids; (c) selecting at least one of the recombinant polypeptides or recombinant nucleic acids; (d) recombining one or more oligonucleotides, at least one of which has a sequence matching some or all of that of the recombinant polypeptides or recombinant nucleic acids selected in (c); (e) selecting at least some of the recombined oligonucleotides produced in (d); and (f) producing a polypeptide encoded by the selected nucleic acid.
    Type: Grant
    Filed: September 10, 2009
    Date of Patent: June 7, 2011
    Assignee: Codexis Mayflower Holdings LLC
    Inventors: Sergey A. Selifonov, Willem P. C. Stemmer, Claes Gustafsson, Matthew Tobin, Stephen del Cardayre, Phillip A. Patten, Jeremy Minshull, Lorraine J. Giver
  • Methods for identifying sets of oligonucleotides for use in an in vitro recombination procedures
    Patent number: 7904249
    Abstract: In silico nucleic acid recombination methods, related integrated systems utilizing genetic operators are used to identify sets of oligonucleotides for in vitro recombination. In certain embodiments, the methods involve inputting amino acid sequence character strings into a digital system and back-translating the amino acid character strings into a plurality of nucleic acid character strings. The nucleic acid character strings are then processed to define and select at least one recombinant nucleic acid for use in identifying one or more oligonucleotides for in vitro recombination.
    Type: Grant
    Filed: October 31, 2007
    Date of Patent: March 8, 2011
    Assignee: Codexis Mayflower Holding, LLC
    Inventors: Sergey A. Selifonov, Willem P. C. Stemmer, Claes Gustafsson, Matthew Tobin, Stephen del Cardayre, Phillip A. Patten, Jeremy Minshull, Lorraine J. Giver
  • Method for making polynucleotides having desired characteristics
    Patent number: 7853410
    Abstract: In silico nucleic acid recombination methods, related integrated systems utilizing genetic operators and libraries made by in silico shuffling methods are provided.
    Type: Grant
    Filed: October 18, 2007
    Date of Patent: December 14, 2010
    Assignee: Codexis, Inc.
    Inventors: Sergey A. Selifonov, Willem P. C. Stemmer, Claes Gustafsson, Matthew Tobin, Stephen del Cardayre, Phillip A. Patten, Jeremy Minshull, Lorraine J. Giver
  • Alanine 2,3-aminomutases and related polynucleotides
    Publication number: 20100248312
    Abstract: The present disclosure relates generally to polypeptides having improved alanine 2,3-aminomutase (AAM) activity, the polynucleotides encoding the AAM polypeptides, and expression vectors and host cells for expressing the AAM polypeptides.
    Type: Application
    Filed: October 16, 2006
    Publication date: September 30, 2010
    Applicant: Codexis, Inc.
    Inventors: Svetlana Balatskaya, Birthe Borup, Ranjini Chatterjee, Ish Dhawan, Richard J. Fox, Kenneth W. Mitchell, Emily C. Mundorff, Les Partridge, Matthew Tobin
  • METHODS FOR IDENTIFYING SETS OF OLIGONUCLEOTIDES FOR USE IN AN IN VITRO RECOMBINATION PROCEDURE
    Publication number: 20100056385
    Abstract: In silico nucleic acid recombination methods, related integrated systems utilizing genetic operators and libraries made by in silico shuffling methods are provided.
    Type: Application
    Filed: September 10, 2009
    Publication date: March 4, 2010
    Applicant: MAXYGEN, INC.
    Inventors: Sergey A. Selifonov, Willem P.C. Stemmer, Claes Gustafsson, Matthew Tobin, Stephen del Cardayre, Phillip A. Patten, Jeremy Minshull, Lorraine J. Giver
  • Methods for identifying sets of oligonucleotides for use in an in vitro recombination procedure
    Patent number: 7620502
    Abstract: In silico nucleic acid recombination methods, related integrated systems utilizing genetic operators are used to identify sets of oligonucleotides for in vitro recombination.
    Type: Grant
    Filed: January 24, 2006
    Date of Patent: November 17, 2009
    Assignee: Maxygen, Inc.
    Inventors: Sergey A. Selifonov, Willem P. C. Stemmer, Claes Gustafsson, Matthew Tobin, Stephen del Cardayre, Phillip A. Patten, Jeremy Minshull, Lorraine J. Giver
  • Methods for making character strings, polynucleotides and polypeptides having desired characteristics
    Publication number: 20080318795
    Abstract: In silico nucleic acid recombination methods, related integrated systems utilizing genetic operators and libraries made by in silico shuffling methods are provided.
    Type: Application
    Filed: October 31, 2007
    Publication date: December 25, 2008
    Applicant: Maxygen, Inc.
    Inventors: Sergey A. Selifonov, Willem P.C. Stemmer, Claes Gustafsson, Matthew Tobin, Stephen del Cardayre, Phillip A. Patten, Jeremy Minshull, Lorraine J. Giver
  • Integrated system for diversity generation and screening
    Patent number: 7462469
    Abstract: Integrated systems and methods for diversity generation and screening are provided. The systems use common fluid and array handling components to provide nucleic acid diversification, transcription, translation, product screening and subsequent diversification reactions.
    Type: Grant
    Filed: May 23, 2002
    Date of Patent: December 9, 2008
    Assignee: Maxygen, Inc.
    Inventors: Steven H. Bass, S. Christopher Davis, Phillip A. Patten, Matthew Tobin, Jeremy Minshull, Mark Welch, Claes Gustafsson, Brian Carr, Stephane Jenne, Sun Ai Raillard, Andreas Crameri, Willem P. C. Stemmer, Robin Emig, Pascal Longchamp, Stanley Goldman, Lorraine J. Giver, Joseph A. Affholter
  • Identifying oligonucleotides for in vitro recombination
    Patent number: 7421347
    Abstract: “In silico” nucleic acid recombination methods, related integrated systems utilizing genetic operators and libraries made by in silico shuffling methods are provided.
    Type: Grant
    Filed: March 7, 2005
    Date of Patent: September 2, 2008
    Assignee: Maxygen, Inc.
    Inventors: Sergey A. Selifonov, Willem P. C. Stemmer, Claes Gustafsson, Matthew Tobin, Stephen del Cardayre, Phillip A. Patten, Jeremy Minshull
  • Methods for making character strings, polynucleotides and polypeptides having desired characteristics
    Publication number: 20080050782
    Abstract: In silico nucleic acid recombination methods, related integrated systems utilizing genetic operators and libraries made by in silico shuffling methods are provided.
    Type: Application
    Filed: October 18, 2007
    Publication date: February 28, 2008
    Applicant: Maxygen, Inc.
    Inventors: Sergey Selifonov, Willem Stemmer, Claes Gustafsson, Matthew Tobin, Stephen Cardayre, Phillip Patten, Jeremy Minshull, Lorraine Giver
  • Integrated Systems and Methods for Diversity Generation and Screening
    Publication number: 20080015116
    Abstract: Integrated systems and methods for diversity generation and screening are provided. The systems use common fluid and array handling components to provide nucleic acid diversification, transcription, translation, product screening and subsequent diversification reactions.
    Type: Application
    Filed: February 21, 2007
    Publication date: January 17, 2008
    Applicant: MAXYGEN, INC.
    Inventors: Steven Bass, S. Davis, Phillip Patten, Matthew Tobin, Jeremy Minshull, Mark Welch, Claus Gustafsson, Brian Carr, Stephane Jenne, Sun Raillard, Andreas Crameri, Willem Stemmer, Robin Emig, Pascal Longschamp, Stanley Goldman, Lorraine Giver, Joseph Affholter
  • Evolution of whole cells and organisms by recursive sequence recombination
    Publication number: 20070048775
    Abstract: The invention provides methods employing iterative cycles of recombination and selection/screening for evolution of whole cells and organisms toward acquisition of desired properties. Examples of such properties include enhanced recombinogenicity, genome copy number, and capacity for expression and/or secretion of proteins and secondary metabolites.
    Type: Application
    Filed: August 17, 2006
    Publication date: March 1, 2007
    Inventors: Stephen Cardayre, Matthew Tobin, Willem Stemmer, Jon Ness, Jeremy Minshull, Phillip Patten, Venkiteswaran Subramanian, Linda Castle, Claus Krebber, Steven Bass, Ying-Xin Zhang, Tony Cox, Gjalt Huisman, Ling Yuan, Joseph Affholter