Abstract: Methods, systems, and products are disclosed for data transfers between nodes in a parallel computer that include: receiving, by an origin DMA on an origin node, a buffer identifier for a buffer containing data for transfer to a target node; sending, by the origin DMA to the target node, a RTS message; transferring, by the origin DMA, a data portion to the target node using a memory FIFO operation that specifies one end of the buffer from which to begin transferring the data; receiving, by the origin DMA, an acknowledgement of the RTS message from the target node; and transferring, by the origin DMA in response to receiving the acknowledgement, any remaining data portion to the target node using a direct put operation that specifies the other end of the buffer from which to begin transferring the data, including initiating the direct put operation without invoking an origin processing core.

Abstract: Methods, systems, and products are disclosed for data transfers between nodes in a parallel computer that include: receiving, by an origin DMA on an origin node, a buffer identifier for a buffer containing data for transfer to a target node; sending, by the origin DMA to the target node, a RTS message; transferring, by the origin DMA, a data portion to the target node using a memory FIFO operation that specifies one end of the buffer from which to begin transferring the data; receiving, by the origin DMA, an acknowledgement of the RTS message from the target node; and transferring, by the origin DMA in response to receiving the acknowledgement, any remaining data portion to the target node using a direct put operation that specifies the other end of the buffer from which to begin transferring the data, including initiating the direct put operation without invoking an origin processing core.

Abstract: Methods, systems, and products are disclosed for administering an epoch initiated for remote memory access that include: initiating, by an origin application messaging module on an origin compute node, one or more data transfers to a target compute node for the epoch; initiating, by the origin application messaging module after initiating the data transfers, a closing stage for the epoch, including rejecting any new data transfers after initiating the closing stage for the epoch; determining, by the origin application messaging module, whether the data transfers have completed; and closing, by the origin application messaging module, the epoch if the data transfers have completed.

Abstract: Performing a local barrier operation with parallel tasks executing on a compute node including, for each task: retrieving a present value of a counter; calculating, in dependence upon the present value of the counter and a total number of tasks performing the local barrier operation, a base value of the counter, the base value representing the counter's value prior to any task joining the local barrier; calculating, in dependence upon the base value and the total number of tasks performing the local barrier operation, a target value, the target value representing the counter's value when all tasks have joined the local barrier; joining the local barrier, including atomically incrementing the value of the counter; and repetitively, until the present value of the counter is no less than the target value of the counter: retrieving the present value of the counter and determining whether the present value equals the target value.

Abstract: Performing a local barrier operation with parallel tasks executing on a compute node including, for each task: retrieving a present value of a counter; calculating, in dependence upon the present value of the counter and a total number of tasks performing the local barrier operation, a base value, the base value representing the counter's value prior to any task joining the local barrier; calculating, in dependence upon the base value and the total number of tasks performing the local barrier operation, a target value of the counter, the target value representing the counter's value when all tasks have joined the local barrier; joining the local barrier, including atomically incrementing the value of the counter; and repetitively, until the present value of the counter is no less than the target value of the counter: retrieving the present value of the counter and determining whether the present value equals the target value.

Abstract: A shared address space on a compute node stores data received from a network and data to transmit to the network. The shared address space includes an application buffer that can be directly operated upon by a plurality of processes, for instance, running on different cores on the compute node. A shared counter is used for one or more of signaling arrival of the data across the plurality of processes running on the compute node, signaling completion of an operation performed by one or more of the plurality of processes, obtaining reservation slots by one or more of the plurality of processes, or combinations thereof.

Abstract: Methods, apparatus, products are disclosed for providing policy-based application services to an application running on a computing system. The computing system includes at least one compute node. The compute node includes an application and a plurality of application services of a service type. Providing policy-based application services to an application running on a computing system includes establishing, on the compute node, a service policy specifying one of the application services of the service type for use by the application, establishing a performance ruleset, the performance ruleset specifying rules for analyzing the performance of the computing system, measuring performance of the computing system, and adjusting the service policy in dependence upon the performance ruleset and the measured performance. Providing policy-based application services to an application running on a computing system may also include accessing, by the application, the specified application service.

Abstract: Methods, apparatuses, and computer program products for optimizing collective communications within a parallel computer comprising a plurality of hardware threads for executing software threads of a parallel application are provided. Embodiments include a processor of a parallel computer determining for each software thread, an affinity of the software thread to a particular hardware thread. Each affinity indicates an assignment of a software thread to a particular hardware thread. The processor also generates one or more affinity domains based on the affinities of the software threads. Embodiments also include a processor generating, for each affinity domain, a topology of the affinity domain based on the affinities of the software threads to the hardware threads. According to embodiments of the present application, a processor also performs, based on the generated topologies of the affinity domains, a collective operation on one or more software threads.

Abstract: Methods, apparatuses, and computer program products for utilizing a kernel administration hardware thread of a multi-threaded, multi-core compute node of a parallel computer are provided. Embodiments include a kernel assigning a memory space of a hardware thread of an application processing core to a kernel administration hardware thread of a kernel processing core. A kernel administration hardware thread is configured to advance the hardware thread to a next memory space associated with the hardware thread in response to the assignment of the kernel administration hardware thread to the memory space of the hardware thread. Embodiments also include the kernel administration hardware thread executing an instruction within the assigned memory space.

Abstract: Internode data communications in a parallel computer that includes compute nodes that each include main memory and a messaging unit, the messaging unit including computer memory and coupling compute nodes for data communications, in which, for each compute node at compute node boot time: a messaging unit allocates, in the messaging unit's computer memory, a predefined number of message buffers, each message buffer associated with a process to be initialized on the compute node; receives, prior to initialization of a particular process on the compute node, a data communications message intended for the particular process; and stores the data communications message in the message buffer associated with the particular process. Upon initialization of the particular process, the process establishes a messaging buffer in main memory of the compute node and copies the data communications message from the message buffer of the messaging unit into the message buffer of main memory.

Abstract: Endpoint-based parallel data processing in a parallel active messaging interface (‘PAMI’) of a parallel computer, the PAMI composed of data communications endpoints, each endpoint including a specification of data communications parameters for a thread of execution on a compute node, including specifications of a client, a context, and a task, the compute nodes coupled for data communications through the PAMI, including establishing a data communications geometry, the geometry specifying, for tasks representing processes of execution of the parallel application, a set of endpoints that are used in collective operations of the PAMI including a plurality of endpoints for one of the tasks; receiving in endpoints of the geometry an instruction for a collective operation; and executing the instruction for a collective operation through the endpoints in dependence upon the geometry, including dividing data communications operations among the plurality of endpoints for one of the tasks.

Abstract: Fencing direct memory access (‘DMA’) data transfers in a parallel active messaging interface (‘PAMI’) of a parallel computer, the PAMI including data communications endpoints, each endpoint including specifications of a client, a context, and a task, the endpoints coupled for data communications through the PAMI and through DMA controllers operatively coupled to segments of shared random access memory through which the DMA controllers deliver data communications deterministically, including initiating execution through the PAMI of an ordered sequence of active DMA instructions for DMA data transfers between two endpoints, effecting deterministic DMA data transfers through a DMA controller and a segment of shared memory; and executing through the PAMI, with no FENCE accounting for DMA data transfers, an active FENCE instruction, the FENCE instruction completing execution only after completion of all DMA instructions initiated prior to execution of the FENCE instruction for DMA data transfers between the two en

Abstract: Data communications in a parallel active messaging interface (‘PAMI’) of a parallel computer, the parallel computer including a plurality of compute nodes that execute a parallel application, the PAMI composed of data communications endpoints, each endpoint including a specification of data communications parameters for a thread of execution on a compute node, including specifications of a client, a context, and a task, the compute nodes and the endpoints coupled for data communications through the PAMI and through data communications resources, including receiving in an origin endpoint of the PAMI a data communications instruction, the instruction characterized by an instruction type, the instruction specifying a transmission of transfer data from the origin endpoint to a target endpoint and transmitting, in accordance with the instruction type, the transfer data from the origin endpoint to the target endpoint.

Abstract: Embodiments of the invention may be used to manage message queues in a parallel computing environment to prevent message queue deadlock. A direct memory access controller of a compute node may determine when a messaging queue is full. In response, the DMA may generate an interrupt. An interrupt handler may stop the DMA and swap all descriptors from the full messaging queue into a larger queue (or enlarge the original queue). The interrupt handler then restarts the DMA. Alternatively, the interrupt handler stops the DMA, allocates a memory block to hold queue data, and then moves descriptors from the full messaging queue into the allocated memory block. The interrupt handler then restarts the DMA. During a normal messaging advance cycle, a messaging manager attempts to inject the descriptors in the memory block into other messaging queues until the descriptors have all been processed.

Abstract: Intranode data communications in a parallel computer that includes compute nodes configured to execute processes, where the data communications include: allocating, upon initialization of a first process of a compute node, a region of shared memory; establishing, by the first process, a predefined number of message buffers, each message buffer associated with a process to be initialized on the compute node; sending, to a second process on the same compute node, a data communications message without determining whether the second process has been initialized, including storing the data communications message in the message buffer of the second process; and upon initialization of the second process: retrieving, by the second process, a pointer to the second process's message buffer; and retrieving, by the second process from the second process's message buffer in dependence upon the pointer, the data communications message sent by the first process.

Abstract: Compiling software for a hierarchical distributed processing system including providing to one or more compiling nodes software to be compiled, wherein at least a portion of the software to be compiled is to be executed by one or more other nodes; compiling, by the compiling node, the software; maintaining, by the compiling node, any compiled software to be executed on the compiling node; selecting, by the compiling node, one or more nodes in a next tier of the hierarchy of the distributed processing system in dependence upon whether any compiled software is for the selected node or the selected node's descendants; sending to the selected node only the compiled software to be executed by the selected node or selected node's descendant.

Abstract: A system and method for enhancing barrier collective synchronization on a computer system comprises a computer system including a data storage device. The computer system includes a program stored in the data storage device and steps of the program being executed by a processor. The system includes providing a plurality of communicators for storing state information for a barrier algorithm. Each communicator designates a master core in a multi-processor environment of the computer system. The system allocates or designates one counter for each of a plurality of threads. The system configures a table with a number of entries equal to the maximum number of threads. The system sets a table entry with an ID associated with a communicator when a process thread initiates a collective. The system determines an allocated or designated counter by searching entries in the table.

Abstract: Distributed administration of a lock for an operational group of compute nodes in a hierarchical tree structured network including assigning the root node of the operational group to send acknowledgments for lock requests, the root lock administration module comprising a module of automated computing machinery; receiving a lock request assigned to a particular node from a child node; determining whether another request from another child is directly ahead in an acknowledgement queue; if a request from another child is directly ahead in the acknowledgement queue, putting the lock request for the particular node in the acknowledgement queue until the lock request directly ahead in the acknowledgement queue is satisfied and when the lock request ahead in the queue is satisfied, sending the particular node for whom the lock request is assigned a message acknowledging the particular node has the lock; and if a request from another child is not directly ahead in a queue, sending to the particular node for whom the

Abstract: Performing a deterministic reduction operation in a parallel computer that includes compute nodes, each of which includes computer processors and a CAU (Collectives Acceleration Unit) that couples computer processors to one another for data communications, including organizing processors and a CAU into a branched tree topology in which the CAU is a root and the processors are children; receiving, from each of the processors in any order, dummy contribution data, where each processor is restricted from sending any other data to the root CAU prior to receiving an acknowledgement of receipt from the root CAU; sending, by the root CAU to the processors in the branched tree topology, in a predefined order, acknowledgements of receipt of the dummy contribution data; receiving, by the root CAU from the processors in the predefined order, the processors' contribution data to the reduction operation; and reducing, by the root CAU, the processors' contribution data.

Abstract: Systems, methods and articles of manufacture are disclosed for effecting a desired collective operation on a parallel computing system that includes multiple compute nodes. The compute nodes may pipeline multiple collective operations to effect the desired collective operation. To select protocols suitable for the multiple collective operations, the compute nodes may also perform additional collective operations. The compute nodes may pipeline the multiple collective operations and/or the additional collective operations to effect the desired collective operation more efficiently.