Patents by Inventor Michael D. Lynch

Michael D. Lynch has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20130189787
    Abstract: The present invention relates to methods, systems and compositions, including genetically modified microorganisms, directed to achieve decreased microbial conversion of 3-hydroxypropionic acid (3-HP) to aldehydes of 3-HP. In various embodiments this is achieved by disruption of particular aldehyde dehydrogenase genes, including multiple gene deletions. Among the specific nucleic acids that are deleted whereby the desired decreased conversion is achieved are aldA, aldB, puuC), and usg of E. coli. Genetically modified microorganisms so modified are adapted to produce 3-HP, such as by approaches described herein.
    Type: Application
    Filed: September 15, 2009
    Publication date: July 25, 2013
    Inventors: Michael D. Lynch, Christopher P. Mercogliano, Matthew L. Lipscomb, Tanya E.W. Lipscomb
  • Patent number: 8467975
    Abstract: The present disclosure concerns methods and compositions relating to mixed-library parallel gene trait mapping. In particular embodiments, the methods concern quantitative microarray hybridization techniques for genome-wide identification of trait conferring genes. In other embodiments, the compositions concern genetic elements that confer or are associated with a trait. In an exemplary embodiment, the trait is enhanced growth rate. In another exemplary embodiment, genetic elements that confer enhanced bacterial growth rate comprise part or all of the sequences of SEQ ID NO:1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4 or SEQ ID NO:5. In other embodiments, the genetic elements that confer enhanced bacterial growth rate correspond to the YliF, adrA, yeaP, yddV or ydeH genes of E. coli.
    Type: Grant
    Filed: July 4, 2011
    Date of Patent: June 18, 2013
    Assignee: The Regents of the University of Colorado, a Body Corporate
    Inventors: Gill Ryan T., Michael D. Lynch, Tanya E. W. Lipscomb
  • Publication number: 20130122541
    Abstract: This invention relates to metabolically engineered microorganism strains, such as bacterial strains, in which there is an increased utilization of malonyl-CoA for production of a chemical product, which includes polyketides and 3-hydroxypropionic acid.
    Type: Application
    Filed: January 27, 2011
    Publication date: May 16, 2013
    Inventors: Michael D. Lynch, Ryan T. Gill, Tanya E.W. Lipscomb
  • Publication number: 20130071893
    Abstract: This invention relates to metabolically engineered microorganism strains, such as bacterial strains, in which there is an increased utilization of malonyl-CoA for production of a chemical product, which includes 3-hydroxypropionic acid.
    Type: Application
    Filed: September 27, 2010
    Publication date: March 21, 2013
    Applicant: OPX Biotechnologies, Inc.
    Inventors: Michael D. Lynch, Ryan T. Gill, Tanya E.W. Lipscomb
  • Patent number: 8303594
    Abstract: A surgical instrument includes a deflectable cutting element extending from the distal end of the instrument. The deflection of the cutting element is controllable based on a user operating a moveable member of the instrument. The deflectable cutting element is normally disposed within a circumferential region defined by the distal end of the instrument. The moveable member can be moved in relation to the instrument to deflect the deflectable cutting element, such that the cutting element is at least partially outside of the circumferential region. The extent that the cutting element is outside of the circumferential region is a function of the position to which the moveable member is moved in relation to the instrument. The instrument further includes direct imaging of the distal end, such that the deflection of the cutting element for selective removal of bone tissue at the distal end of the instrument can be controlled in real-time.
    Type: Grant
    Filed: December 30, 2008
    Date of Patent: November 6, 2012
    Assignee: Howmedica Osteonics Corp.
    Inventors: Michael D. Lynch, Carlos E. Collazo, An Chen, Brian Graner
  • Publication number: 20120264902
    Abstract: The present invention relates to methods, systems and compositions, including genetically modified microorganisms, adapted to exhibit increased tolerance to 3-hydroxypropionic acid (3-HP), particularly through alterations to interrelated metabolic pathways identified herein as the 3-HP toleragenic pathway complex (“3HPTGC”). In various embodiments these organisms are genetically modified so that an increased 3-HP tolerance is achieved. Also, genetic modifications may be made to provide at least one genetic modification to any of one or more 3-HP biosynthesis pathways in microorganisms comprising one or more genetic modifications of the 3HPTGC.
    Type: Application
    Filed: March 9, 2012
    Publication date: October 18, 2012
    Applicants: The Regents of the University of Colorado, a body corporate, OPX Biotechnologies, Inc.
    Inventors: Tanya E.W. Lipscomb, Michael D. Lynch, Ryan T. Gill
  • Publication number: 20120223498
    Abstract: An adjustment assembly includes first and second connection points associated with a component. The second connection point is selectively adjustable to adjust a position of the component. A shield has one end coupled to the first connection point and an opposite end proximate to the second connection point to selectively prevent access to the second connection point. The shield is selectively movable when the first connection point is loosened to allow access to the second connection point. To achieve proper adjustment of the component, the first connection point must be loosened prior to adjusting a position of the second connection point.
    Type: Application
    Filed: March 1, 2011
    Publication date: September 6, 2012
    Inventors: Gustavo Vieira Borges, Robert J. Brazeau, Christopher J. Wittry, Michael D. Lynch, Michael A. Power, Gregory Todd Smith, Kenneth G. Lang, Anthony E. Nicol, Gregory D. Pavuk, Edward J. Gebal, Thomas S. Mijal, Esequiel Berra de Mello, Christopher S. Keeney, David G. Gonska
  • Publication number: 20120077681
    Abstract: The present disclosure concerns methods and compositions relating to mixed-library parallel gene trait mapping. In particular embodiments, the methods concern quantitative microarray hybridization techniques for genome-wide identification of trait conferring genes. In other embodiments, the compositions concern genetic elements that confer or are associated with a trait. In an exemplary embodiment, the trait is enhanced growth rate. In another exemplary embodiment, genetic elements that confer enhanced bacterial growth rate comprise part or all of the sequences of SEQ ID NO:1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4 or SEQ ID NO:5. In other embodiments, the genetic elements that confer enhanced bacterial growth rate correspond to the YliF, adrA, yeaP, yddV or ydeH genes of E. coli.
    Type: Application
    Filed: July 4, 2011
    Publication date: March 29, 2012
    Inventors: Gill Ryan T., Michael D. Lynch, Tanya E. W. Lipscomb
  • Publication number: 20120041232
    Abstract: Methods of obtaining mutant nucleic acid sequences that demonstrate elevated oxaloacetate ?-decarboxylase activity are provided. Compositions, such as genetically modified microorganisms that comprise such mutant nucleic acid sequences, are described, as are methods to obtain the same.
    Type: Application
    Filed: October 28, 2011
    Publication date: February 16, 2012
    Applicant: OPX BIOTECHNOLOGIES, INC.
    Inventor: Michael D. Lynch
  • Publication number: 20110281314
    Abstract: Embodiments herein generally relate to methods, compositions, systems and uses for enabling bio-production of or increasing bio-production of alcohol molecules by microorganisms. Certain embodiments relate to compositions and methods enabling or increasing the bio-production of 4-carbon alcohol molecules by bacteria. In some embodiments, compositions and methods relate to introducing isobutyryl-CoA isomerase to a culture of microorganisms to enable or increase the bio-production of four-carbon alcohols. Variations of biosynthesis pathways for microbial bio-production of butanol and/or isobutanol are provided.
    Type: Application
    Filed: August 4, 2009
    Publication date: November 17, 2011
    Inventor: Michael D. Lynch
  • Patent number: 8048624
    Abstract: Methods of obtaining mutant nucleic acid sequences that demonstrate elevated oxaloacetate ?-decarboxylase activity are provided. Compositions, such as genetically modified microorganisms that comprise such mutant nucleic acid sequences, are described, as are methods to obtain the same.
    Type: Grant
    Filed: December 4, 2008
    Date of Patent: November 1, 2011
    Assignee: OPX Biotechnologies, Inc.
    Inventor: Michael D. Lynch
  • Publication number: 20110244575
    Abstract: The present invention relates to methods, systems and compositions, including genetically modified microorganisms, adapted to exhibit increased tolerance to 3-hydroxypropionic acid (3-HP), particularly through alterations to interrelated metabolic pathways identified herein as the 3-HP toleragenic pathway complex (“3HPTGC”). In various embodiments these organisms are genetically modified so that an increased 3-HP tolerance is achieved. Also, genetic modifications may be made to provide at least one genetic modification to any of one or more 3-HP biosynthesis pathways in microorganisms comprising one or more genetic modifications of the 3HPTGC.
    Type: Application
    Filed: July 23, 2009
    Publication date: October 6, 2011
    Inventors: Tanya E.W. Lipscomb, Michael D. Lynch, Ryan T. Gill
  • Patent number: 8016211
    Abstract: A propulsion system with a divergent-convergent nozzle is provided with variable thrust by a pintle whose position relative to the nozzle throat is controlled by an actuator that includes a rotor that external to, and encircling, the nozzle, and that is coupled to either the pintle or to the nozzle shell by a linkage that translates the rotary movement of the rotor into linear movement of either the pintle or the shell.
    Type: Grant
    Filed: March 4, 2008
    Date of Patent: September 13, 2011
    Assignee: Aerojet-General Corporation
    Inventors: Dustin C. Barr, Michael D. Lynch
  • Publication number: 20110190513
    Abstract: Three biosynthetic pathways are disclosed for microorganism bio-production of 1,4-Butanediol from various carbon sources. Exemplary methods are provided. The recombinant microorganisms comprising any of these 1,4-Butanediol biosynthesis pathways may also comprise genetic modifications directed to improved tolerance for 1,4-Butanediol.
    Type: Application
    Filed: July 8, 2009
    Publication date: August 4, 2011
    Inventor: Michael D. Lynch
  • Patent number: 7987056
    Abstract: The present disclosure concerns methods and compositions relating to mixed-library parallel gene trait mapping. In particular embodiments, the methods concern quantitative microarray hybridization techniques for genome-wide identification of trait conferring genes. In other embodiments, the compositions concern genetic elements that confer or are associated with a trait. In an exemplary embodiment, the trait is enhanced growth rate. In another exemplary embodiment, genetic elements that confer enhanced bacterial growth rate comprise part or all of the sequences of SEQ ID NO:1, SEQ ID NO:2, SEQ ID NO:3, SEQ ID NO:4 or SEQ ID NO:5. In other embodiments, the genetic elements that confer enhanced bacterial growth rate correspond to the YliF, adrA, yeaP, yddV or ydeH genes of E. coli.
    Type: Grant
    Filed: September 20, 2005
    Date of Patent: July 26, 2011
    Assignee: The Regents of the University of Colorado, a body corporate
    Inventors: Ryan T. Gill, Michael D. Lynch, Tanya Warnecke
  • Publication number: 20110124063
    Abstract: This invention relates to microorganism cells that are modified to increase conversion of carbon dioxide and/or carbon monoxide to a product, such as a fatty acid methyl ester, and to related methods and systems. A pathway from the Calvin Benson Cycle to the product is provided, which in various embodiments involves use of heterologous proteins that exhibit desired enzymatic conversions.
    Type: Application
    Filed: November 19, 2010
    Publication date: May 26, 2011
    Applicant: OPX Biotechnologies, Inc.
    Inventor: Michael D. Lynch
  • Publication number: 20110125118
    Abstract: The present invention relates to methods, systems and compositions, including genetically modified microorganisms, e.g., recombinant microorganisms, adapted to utilize one or more synthesis gas components in a microbial bio-production of one or more desired biomolecules and products of commercial interest.
    Type: Application
    Filed: November 22, 2010
    Publication date: May 26, 2011
    Applicant: OPX Biotechnologies, Inc.
    Inventor: Michael D. Lynch
  • Publication number: 20110082425
    Abstract: A device and method for aspirating fluid from a body cavity are disclosed herein. The device disclosed utilizes a reservoir in fluid communication with a needle via a tube connected to a pump. The needle is able to displace a desired distance. Further, the aspirator includes a selector switch capable having three positions. In the first position anticoagulant is pumped through the system. In the second position bone marrow is aspirated but the needle is not moved. In the third position the displacement of the needle is controlled as well as the volume in the reservoir. Further, in the third position, the volume in the reservoir and the needle displacement are proportional to one another.
    Type: Application
    Filed: October 2, 2009
    Publication date: April 7, 2011
    Applicant: HOWMEDICA OSTEONICS CORP.
    Inventors: Thies Wuestemann, Michael D. Lynch, Carlos E. Collazo
  • Patent number: 7842485
    Abstract: Embodiments of the present invention provide methods and compositions for microorganisms having increased alcohol tolerance. In certain embodiments, methods for using such microorganisms, and methods for identifying gene or genetic regions responsible for increased alcohol tolerance are contemplated.
    Type: Grant
    Filed: March 15, 2007
    Date of Patent: November 30, 2010
    Assignee: The Regents of the University of Colorado
    Inventors: Ryan T. Gill, Michael D. Lynch, Tanya Warnecke
  • Publication number: 20100210017
    Abstract: Embodiments herein generally relate to methods, compositions and uses for enhancing tolerance of production of organic acids and alcohols by microorganisms. This application also relates generally to methods, compositions and uses of vectors having one or more genetic element to increase the tolerance of organic acids or alcohols by a microorganism. Certain embodiments relate to compositions and methods of enhancing the tolerance for production of 3-hydroxypropionic acid (3-HP) by bacteria. In some embodiments, compositions and methods relate to regulating the expression of an inhibitory molecule of an enhancing gene to increase production of organic acid by bacteria.
    Type: Application
    Filed: January 11, 2008
    Publication date: August 19, 2010
    Inventors: Ryan T. Gill, Tanya E. Lipscomb, Michael D. Lynch