Patents by Inventor Michael Jared Lumpe

Michael Jared Lumpe has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Identification of microorganisms from genome sequencing data
    Patent number: 10752958
    Abstract: A diagnostic analysis method and system is provided for identifying a microorganism from a genome sequence. Partially or fully assembled microbial genomes or short reads from whole-genome sequencing of microbial genomes are processed into a 4 MB Boolean array while preserving 1% of the genomic information in a way that allows for rapid comparison of a query genome to a large reference database. This represents a critical savings in storage space and speed by which large reference libraries can be queried.
    Type: Grant
    Filed: May 11, 2017
    Date of Patent: August 25, 2020
    Assignee: Santa Clara University
    Inventors: David Hess, Farid Tadros, Michael Jared Lumpe, Eileen Wagner, Mark W. Pandori
  • Identification of Microorganisms from genome sequencing data
    Publication number: 20170327904
    Abstract: A diagnostic analysis method and system is provided for identifying a microorganism from a genome sequence. Partially or fully assembled microbial genomes or short reads from whole-genome sequencing of microbial genomes are processed into a 4 MB Boolean array while preserving 1% of the genomic information in a way that allows for rapid comparison of a query genome to a large reference database. This represents a critical savings in storage space and speed by which large reference libraries can be queried.
    Type: Application
    Filed: May 11, 2017
    Publication date: November 16, 2017
    Inventors: David Hess, Farid Tadros, Michael Jared Lumpe, Eileen Wagner, Mark W. Pandori