Patents by Inventor Nathan Magarvey

Nathan Magarvey has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11842798
    Abstract: A method for linking a natural product and gene cluster is disclosed. In some embodiments, monomers of natural products are predicted from a gene sequence. In other embodiments, monomers of natural products are predicted from a chemical structure of a natural product. In another embodiment, monomers predicted from gene sequences are aligned with monomers predicted from chemical structures.
    Type: Grant
    Filed: December 14, 2016
    Date of Patent: December 12, 2023
    Assignee: Adapsyn Bioscience Inc.
    Inventors: Nishanth Merwin, Chris DeJong, Chad Johnston, Gregory Chen, Haoxin Li, Michael Skinnider, McLean Edwards, Nathan Magarvey, Phil Rees
  • Patent number: 10174401
    Abstract: The present application discloses metallophores that complex soluble gold and generate solid gold forms, including gold nanoparticles. In an embodiment, the metallophores are microbial metabolites isolated from organisms that are resistant to gold, or are analogs thereof. Methods of using the metallophores to extract and detect gold, along with detectors comprising the metallophores are disclosed.
    Type: Grant
    Filed: January 14, 2014
    Date of Patent: January 8, 2019
    Assignee: McMaster University
    Inventors: Aubrey Morgan Bailey Wyatt, Chad Johnston, Nathan Magarvey
  • Publication number: 20180373833
    Abstract: A method for linking a natural product and gene cluster is disclosed. In some embodiments, monomers of natural products are predicted from a gene sequence. In other emboidments, monomers of natural products are predicted from a chemical structure of a natural product. In another embodiment, monomers predicted from gene sequences are aligned with monomers predicted from chemical structures.
    Type: Application
    Filed: December 14, 2016
    Publication date: December 27, 2018
    Applicant: McMaster University
    Inventors: Nishanth MERWIN, Chris DEJONG, Chad JOHNSTON, Gregory CHEN, Haoxin LI, Michael SKINNIDER, McLean EDWARDS, Nathan MAGARVEY, Phil REES
  • Patent number: 9842198
    Abstract: The present application is directed to methods and systems for identifying small molecule compounds in mixtures using a library comprising calculated structures and corresponding calculated mass spectral fragmentation patterns of known and/or hypothetical small molecule compounds that may be in the mixture and screening of a mass spectrum of the mixture using the library to identify matching fragmentation patterns. If a mass spectral fragmentation pattern present in the mass spectrum of the mixture matches a calculated fragmentation pattern of one of the known or hypothetical compounds this confirms the identity of a compound in the mixture as the known or hypothetical compound. The method represents a platform method that can be used for a multitude of purposes related to the screening and identification of compounds in mixtures.
    Type: Grant
    Filed: June 5, 2013
    Date of Patent: December 12, 2017
    Assignee: McMaster University
    Inventors: Nathan Magarvey, Aubrey Bailey Morgan Wyatt, Chad William Johnston, Ashraf Ibrahim, Bin Ma, Lian Yang
  • Publication number: 20150354024
    Abstract: The present application discloses metallophores that complex soluble gold and generate solid gold forms, including gold nanoparticles. In an embodiment, the metallophores are microbial metabolites isolated from organisms that are resistant to gold, or are analogs thereof. Methods of using the metallophores to extract and detect gold, along with detectors comprising the metallophores are disclosed.
    Type: Application
    Filed: January 14, 2014
    Publication date: December 10, 2015
    Applicant: MCMASTER UNIVERSITY
    Inventors: Morgan WYATT, Chad JOHNSTON, Nathan MAGARVEY
  • Publication number: 20150148242
    Abstract: The present application is directed to methods and systems for identifying small molecule compounds in mixtures using a library comprising calculated structures and corresponding calculated mass spectral fragmentation patterns of known and/or hypothetical small molecule compounds that may be in the mixture and screening of a mass spectrum of the mixture using the library to identify matching fragmentation patterns. If a mass spectral fragmentation pattern present in the mass spectrum of the mixture matches a calculated fragmentation pattern of one of the known or hypothetical compounds this confirms the identity of a compound in the mixture as the known or hypothetical compound. The method represents a platform method that can be used for a multitude of purposes related to the screening and identification of compounds in mixtures.
    Type: Application
    Filed: June 5, 2013
    Publication date: May 28, 2015
    Applicant: McMaster University
    Inventors: Nathan Magarvey, Aubrey Bailey Morgan Wyatt, Chad William Johnston, Ashraf Ibrahim, Bin Ma, Lian Yang
  • Patent number: 7709620
    Abstract: The present invention describes the identification of novel non-ribosomal peptide synthetases and associated biosynthetic genes from Streptomyces hygroscopicus. The present invention further provides methods for generating novel compounds, such as antibiotics, from these synthetases and associated genes.
    Type: Grant
    Filed: March 16, 2007
    Date of Patent: May 4, 2010
    Assignee: Wyeth
    Inventors: John A. Hucul, Nathan Magarvey, Michael Greenstein
  • Patent number: 7662599
    Abstract: The present invention provides polypeptides involved in cryptophycin biosynthesis and the nucleic acid molecules that encode such polypeptides. The nucleic acid molecules and polypeptides of the invention or variants thereof can be used in the methods of the invention to produce cryptophycins.
    Type: Grant
    Filed: March 27, 2007
    Date of Patent: February 16, 2010
    Assignees: Regents of the University of Minnesota, Regents of the University of Michigan
    Inventors: David H. Sherman, Nathan Magarvey, Zachary Q. Beck
  • Patent number: 7608448
    Abstract: The present invention relates to a vector comprising sequences that permit direct transfer of the vector from one prokaryotic cell to another, such as by intergeneric conjugation. The invention also relates to methods of making and using the vector.
    Type: Grant
    Filed: March 28, 2003
    Date of Patent: October 27, 2009
    Assignee: Wyeth
    Inventor: Nathan Magarvey
  • Patent number: 7341861
    Abstract: The present invention describes the identification of novel non-ribosomal peptide synthetases and associated biosynthetic genes from Streptomyces hygroscopicus. The present invention further provides methods for generating novel compounds, such as antibiotics, from these synthetases and associated genes.
    Type: Grant
    Filed: February 17, 2006
    Date of Patent: March 11, 2008
    Assignee: Wyeth
    Inventors: John A. Hucul, Nathan Magarvey, Michael Greenstein
  • Publication number: 20080050796
    Abstract: The present invention provides polypeptides involved in cryptophycin biosynthesis and the nucleic acid molecules that encode such polypeptides. The nucleic acid molecules and polypeptides of the invention or variants thereof can be used in the methods of the invention to produce cryptophycins.
    Type: Application
    Filed: March 27, 2007
    Publication date: February 28, 2008
    Inventors: David Sherman, Nathan Magarvey, Zachary Beck
  • Publication number: 20070172909
    Abstract: The present invention describes the identification of novel non-ribosomal peptide synthetases and associated biosynthetic genes from Streptomyces hygroscopicus. The present invention further provides methods for generating novel compounds, such as antibiotics, from these synthetases and associated genes.
    Type: Application
    Filed: March 16, 2007
    Publication date: July 26, 2007
    Applicant: WYETH
    Inventors: John Hucul, Nathan Magarvey, Michael Greenstein
  • Patent number: 7229814
    Abstract: The present invention provides polypeptides involved in cryptophycin biosynthesis and the nucleic acid molecules that encode such polypeptides. The nucleic acid molecules and polypeptides of the invention or variants thereof can be used in the methods of the invention to produce cryptophycins.
    Type: Grant
    Filed: May 5, 2005
    Date of Patent: June 12, 2007
    Assignees: Regents of the University of Minnesota, Regents of the University of Michigan
    Inventors: David H. Sherman, Nathan Magarvey, Zachary Q. Beck
  • Patent number: 7195907
    Abstract: The present invention describes the identification of novel non-ribosomal peptide synthetases and associated biosynthetic genes from Streptomyces hygroscopicus. The present invention further provides methods for generating novel compounds, such as antibiotics, from these synthetases and associated genes.
    Type: Grant
    Filed: December 23, 2003
    Date of Patent: March 27, 2007
    Assignee: Wyeth
    Inventors: John A. Hucul, Nathan Magarvey, Michael Greenstein
  • Publication number: 20060269994
    Abstract: The present invention describes the identification of novel non-ribosomal peptide synthetases and associated biosynthetic genes from Streptomyces hygroscopicus. The present invention further provides methods for generating novel compounds, such as antibiotics, from these synthetases and associated genes.
    Type: Application
    Filed: February 17, 2006
    Publication date: November 30, 2006
    Applicant: Wyeth
    Inventors: John Hucul, Nathan Magarvey, Michael Greenstein
  • Publication number: 20060057698
    Abstract: The present invention provides polypeptides involved in cryptophycin biosynthesis and the nucleic acid molecules that encode such polypeptides. The nucleic acid molecules and polypeptides of the invention or variants thereof can be used in the methods of the invention to produce cryptophycins.
    Type: Application
    Filed: May 5, 2005
    Publication date: March 16, 2006
    Inventors: David Sherman, Nathan Magarvey, Zachary Beck
  • Publication number: 20040147007
    Abstract: The present invention describes the identification of novel non-ribosomal peptide synthetases and associated biosynthetic genes from Streptomyces hygroscopicus. The present invention further provides methods for generating novel compounds, such as antibiotics, from these synthetases and associated genes.
    Type: Application
    Filed: December 23, 2003
    Publication date: July 29, 2004
    Applicant: Wyeth
    Inventors: John A. Hucul, Nathan Magarvey, Michael Greenstein
  • Publication number: 20030224484
    Abstract: The present invention relates to a vector comprising sequences that permit direct transfer of the vector from one prokaryotic cell to another, such as by intergeneric conjugation. The invention also relates to methods of making and using the vector.
    Type: Application
    Filed: March 28, 2003
    Publication date: December 4, 2003
    Applicant: WYETH
    Inventor: Nathan Magarvey
  • Publication number: 20030219872
    Abstract: The present invention describes the identification of novel non-ribosomal peptide synthetases and associated biosynthetic genes from Streptomyces hygroscopicus. The present invention further provides methods for generating novel compounds, such as antibiotics, from these synthetases and associated genes.
    Type: Application
    Filed: March 28, 2003
    Publication date: November 27, 2003
    Applicant: WYETH
    Inventors: John A. Hucul, Nathan Magarvey, Michael Greenstein