Patents by Inventor Nathaniel Braman

Nathaniel Braman has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240119597
    Abstract: The present disclosure relates to a method that provides a pre-treatment image of a region of tissue to a deep learning model. The pre-treatment image includes at least one lesion. The deep learning model has been trained to generate a first prediction as to whether the region of tissue will respond to medical treatment. A set of radiomic features are extracted from the pre-treatment image and are provided to a machine learning model. The machine learning model has been trained to generate a second prediction as to whether the region of tissue will respond to the medical treatment based on the set of radiomic features. The deep learning model is controlled to generate the first prediction and the machine learning model is controlled to generate the second prediction. A classification of the region of tissue as a responder or non-responder is generated based on the first and second prediction.
    Type: Application
    Filed: December 19, 2023
    Publication date: April 11, 2024
    Inventors: Anant Madabhushi, Nathaniel Braman, Kavya Ravichandran, Andrew Janowczyk
  • Publication number: 20240057874
    Abstract: The present disclosure relates to a method. The method may be performed by accessing data derived from one or more routine clinical medical imaging scans including a lesion in which the lesion and associated vasculature are segmented in a three-dimensional segmentation. At least two features are extracted from the three-dimensional segmentation of the associated vasculature. The at least two features include at least one feature indicative of a morphology of the associated vasculature or a portion thereof, and at least one feature indicative of a function of the associated vasculature or a portion thereof. The at least two features, and/or one or more statistics of the at least two features, are provided to a machine learning model trained to make a prediction concerning the lesion. The prediction concerning the lesion is received from the machine learning model.
    Type: Application
    Filed: October 27, 2023
    Publication date: February 22, 2024
    Inventors: Anant Madabhushi, Nathaniel Braman
  • Patent number: 11896349
    Abstract: Embodiments discussed herein facilitate determination of a response to treatment and/or a prognosis for a tumor based at least in part on features of tumor-associated vasculature (TAV). One example embodiment is a method, comprising: accessing a medical imaging scan of a tumor, wherein the tumor is segmented on the medical imaging scan; segmenting tumor-associated vasculature (TAV) associated with the tumor based on the medical imaging scan; extracting one or more features from the TAV; providing the one or more features extracted from the TAV to a trained machine learning model; and receiving, from the machine learning model, one of a predicted response to a treatment for the tumor or a prognosis for the tumor.
    Type: Grant
    Filed: December 9, 2020
    Date of Patent: February 13, 2024
    Assignees: Case Western Reserve University, The United States Government as Represented by The Department of Veteran Affairs
    Inventors: Anant Madabhushi, Nathaniel Braman
  • Patent number: 11817204
    Abstract: Embodiments discussed herein facilitate determination of whether lesions are benign or malignant. One example embodiment is a method, comprising: accessing medical imaging scan(s) that are each associated with distinct angle(s) and each comprise a segmented region of interest (ROI) of that medical imaging scan comprising a lesion associated with a first region and a second region; providing the first region(s) of the medical imaging scan(s) to trained first deep learning (DL) model(s) of an ensemble and the second region(s) of the medical imaging scan(s) to trained second DL model(s) of the ensemble; and receiving, from the ensemble of DL models, an indication of whether the lesion is a benign architectural distortion (AD) or a malignant AD.
    Type: Grant
    Filed: December 9, 2020
    Date of Patent: November 14, 2023
    Assignees: Case Western Reserve University, The United States Government as Represented by The Department of Veteran Affairs
    Inventors: Anant Madabhushi, Nathaniel Braman, Tristan Maidment, Yijiang Chen
  • Patent number: 11810292
    Abstract: Embodiments discussed herein facilitate training and/or employing a combined model employing machine learning and deep learning outputs to generate prognoses for treatment of tumors. One example embodiment can extract radiomic features from a tumor and a peri-tumoral region; provide the intra-tumoral and peri-tumoral features to two separate machine learning models; provide the segmented tumor and peri-tumoral region to two separate deep learning models; receive predicted prognoses from each of the machine learning models and each of the deep learning models; provide the predicted prognoses to a combined machine learning model; and receive a combined predicted prognosis for the tumor from the combined machine learning model.
    Type: Grant
    Filed: September 30, 2020
    Date of Patent: November 7, 2023
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Nathaniel Braman, Jeffrey Eben
  • Publication number: 20220404364
    Abstract: The present disclosure relates to a method of determining a prognostic outlook for patients having metastatic breast cancer. The method includes receiving imaging data from an image of a patient that is receiving or that is to receive cycline dependent kinase 4 and 6 (CDK 4/6) inhibitor therapy for hormone receptor-positive (HR+) metastatic breast cancer. Radiomic heterogeneity features are extracted from imaging data associated with a metastasis within the imaging. A prognostic marker is determined from the radiomic heterogeneity features. The prognostic marker is indicative of a response of the patient to CDK 4/6 inhibitor therapy for HR+ metastatic breast cancer.
    Type: Application
    Filed: November 23, 2021
    Publication date: December 22, 2022
    Inventors: Anant Madabhushi, Nathaniel Braman, Siddharth Kunte, Alberto Montero
  • Publication number: 20220292674
    Abstract: A system and method are provided for identifying a multimodal biomarker of a prognostic prediction, using a deep learning framework trained to analyze different modality data, including radiomic image data, pathology image data, and molecular image data to obtain unimodal embedding predictions from those modality data and generate multimodal embedding predictions, through application of a loss minimization and attention-based fusion processes.
    Type: Application
    Filed: March 3, 2022
    Publication date: September 15, 2022
    Inventors: Nathaniel Braman, Jagadish Venkataraman, Emery T. Goossens
  • Publication number: 20210174504
    Abstract: Embodiments discussed herein facilitate determination of whether lesions are benign or malignant. One example embodiment is a method, comprising: accessing medical imaging scan(s) that are each associated with distinct angle(s) and each comprise a segmented region of interest (ROI) of that medical imaging scan comprising a lesion associated with a first region and a second region; providing the first region(s) of the medical imaging scan(s) to trained first deep learning (DL) model(s) of an ensemble and the second region(s) of the medical imaging scan(s) to trained second DL model(s) of the ensemble; and receiving, from the ensemble of DL models, an indication of whether the lesion is a benign architectural distortion (AD) or a malignant AD.
    Type: Application
    Filed: December 9, 2020
    Publication date: June 10, 2021
    Inventors: Anant Madabhushi, Nathaniel Braman, Tristan Maidment, Yijiang Chen
  • Publication number: 20210169349
    Abstract: Embodiments discussed herein facilitate determination of a response to treatment and/or a prognosis for a tumor based at least in part on features of tumor-associated vasculature (TAV). One example embodiment is a method, comprising: accessing a medical imaging scan of a tumor, wherein the tumor is segmented on the medical imaging scan; segmenting tumor-associated vasculature (TAV) associated with the tumor based on the medical imaging scan; extracting one or more features from the TAV; providing the one or more features extracted from the TAV to a trained machine learning model; and receiving, from the machine learning model, one of a predicted response to a treatment for the tumor or a prognosis for the tumor.
    Type: Application
    Filed: December 9, 2020
    Publication date: June 10, 2021
    Inventors: Anant Madabhushi, Nathaniel Braman
  • Publication number: 20210097682
    Abstract: Embodiments discussed herein facilitate training and/or employing a combined model employing machine learning and deep learning outputs to generate prognoses for treatment of tumors. One example embodiment can extract radiomic features from a tumor and a peri-tumoral region; provide the intra-tumoral and peri-tumoral features to two separate machine learning models; provide the segmented tumor and peri-tumoral region to two separate deep learning models; receive predicted prognoses from each of the machine learning models and each of the deep learning models; provide the predicted prognoses to a combined machine learning model; and receive a combined predicted prognosis for the tumor from the combined machine learning model.
    Type: Application
    Filed: September 30, 2020
    Publication date: April 1, 2021
    Inventors: Anant Madabhushi, Nathaniel Braman, Jeffrey Eben
  • Patent number: 10902591
    Abstract: Embodiments access a pre-neoadjuvant chemotherapy (NAC) radiological image of a region of tissue demonstrating breast cancer (BCa), the region of tissue including a tumoral region, the image having a plurality of pixels; extract a set of patches from the tumoral region; provide the set of patches to a convolutional neural network (CNN) configured to discriminate tissue that will experience pathological complete response (pCR) post-NAC from tissue that will not; receive, from the CNN, a pixel-level localized patch probability of pCR; compute a distribution of predictions across analyzed patches based on the pixel-level localized patch probability; classify the region of tissue as a responder or non-responder based on the distribution of predictions, and display the classification. Embodiments may further generate a probability mask based on the pixel-level localized patch probability; and generate a heatmap of likelihood of response to NAC based on the probability mask and the pre-NAC radiological image.
    Type: Grant
    Filed: February 6, 2019
    Date of Patent: January 26, 2021
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Nathaniel Braman, Andrew Janowczyk, Kavya Ravichandran
  • Patent number: 10861152
    Abstract: Embodiments access a radiological image of tissue having a tumoral volume and a peritumoral volume; define a vasculature associated with the tumoral volume; generate a Cartesian two-dimensional (2D) vessel network representation; compute a first set of localized Hough transforms based on the Cartesian 2D vessel network representation; generate a first aggregated set of peak orientations based on the first set of Hough transforms; generate a spherical 2D vessel network representation; compute a second set of localized Hough transforms based on the spherical 2D vessel network representation; generate a second aggregated set of peak orientations based on the second set of Hough transforms; generate a vascular network organization descriptor based on the aggregated peak orientations; compute a probability that the tissue is a member of a positive class based on the vascular network organization descriptor; classify the ROI based on the probability; and display the classification.
    Type: Grant
    Filed: March 15, 2019
    Date of Patent: December 8, 2020
    Assignee: Case Western Reserve University
    Inventors: Anant Madabhushi, Nathaniel Braman, Prateek Prasanna
  • Publication number: 20190287243
    Abstract: Embodiments access a radiological image of tissue having a tumoral volume and a peritumoral volume; define a vasculature associated with the tumoral volume; generate a Cartesian two-dimensional (2D) vessel network representation; compute a first set of localized Hough transforms based on the Cartesian 2D vessel network representation; generate a first aggregated set of peak orientations based on the first set of Hough transforms; generate a spherical 2D vessel network representation; compute a second set of localized Hough transforms based on the spherical 2D vessel network representation; generate a second aggregated set of peak orientations based on the second set of Hough transforms; generate a vascular network organization descriptor based on the aggregated peak orientations; compute a probability that the tissue is a member of a positive class based on the vascular network organization descriptor; classify the ROI based on the probability; and display the classification.
    Type: Application
    Filed: March 15, 2019
    Publication date: September 19, 2019
    Inventors: Anant Madabhushi, Nathaniel Braman, Prateek Prasanna
  • Publication number: 20190259157
    Abstract: Embodiments predict response to neoadjuvant chemotherapy (NAC) in breast cancer (BCa) from pre-treatment dynamic contrast enhanced magnetic resonance imaging (DCE-MRI).
    Type: Application
    Filed: February 20, 2019
    Publication date: August 22, 2019
    Inventors: Anant Madabhushi, Nathaniel Braman, Kavya Ravichandran, Andrew Janowczyk
  • Publication number: 20190251688
    Abstract: Embodiments access a pre-neoadjuvant chemotherapy (NAC) radiological image of a region of tissue demonstrating breast cancer (BCa), the region of tissue including a tumoral region, the image having a plurality of pixels; extract a set of patches from the tumoral region; provide the set of patches to a convolutional neural network (CNN) configured to discriminate tissue that will experience pathological complete response (pCR) post-NAC from tissue that will not; receive, from the CNN, a pixel-level localized patch probability of pCR; compute a distribution of predictions across analyzed patches based on the pixel-level localized patch probability; classify the region of tissue as a responder or non-responder based on the distribution of predictions, and display the classification. Embodiments may further generate a probability mask based on the pixel-level localized patch probability; and generate a heatmap of likelihood of response to NAC based on the probability mask and the pre-NAC radiological image.
    Type: Application
    Filed: February 6, 2019
    Publication date: August 15, 2019
    Inventors: Anant Madabhushi, Nathaniel Braman, Andrew Janowczyk, Kavya Ravichandran
  • Patent number: 10055842
    Abstract: Methods, apparatus, and other embodiments distinguish disease phenotypes and mutational status using co-occurrence of local anisotropic gradient orientations (CoLIAGe) and Laws features. One example apparatus includes a set of circuits that acquires a radiologic image (e.g., MRI image) of a region of tissue demonstrating breast cancer, computes a gradient orientation for a pixel in the MRI image, computes a significant orientation for the pixel based on the gradient orientation, constructs a feature vector that captures a discretized entropy distribution for the image based on the significant orientation, extracts a set of texture features from the MRI image, and classifies the phenotype of the breast cancer based on the feature vector and the set of texture features. Embodiments of example apparatus may generate and display a heatmap of entropy values for the image. Example methods and apparatus may operate substantially in real-time, or may operate in two, three, or more dimensions.
    Type: Grant
    Filed: January 3, 2017
    Date of Patent: August 21, 2018
    Assignee: Case Western Reserve University
    Inventors: Prateek Prasanna, Nathaniel Braman, Anant Madabhushi, Vinay Varadan, Lyndsay Harris, Salendra Singh
  • Publication number: 20180033138
    Abstract: Methods, apparatus, and other embodiments distinguish disease phenotypes and mutational status using co-occurrence of local anisotropic gradient orientations (CoLIAGe) and Laws features. One example apparatus includes a set of circuits that acquires a radiologic image (e.g., MRI image) of a region of tissue demonstrating breast cancer, computes a gradient orientation for a pixel in the MRI image, computes a significant orientation for the pixel based on the gradient orientation, constructs a feature vector that captures a discretized entropy distribution for the image based on the significant orientation, extracts a set of texture features from the MRI image, and classifies the phenotype of the breast cancer based on the feature vector and the set of texture features. Embodiments of example apparatus may generate and display a heatmap of entropy values for the image. Example methods and apparatus may operate substantially in real-time, or may operate in two, three, or more dimensions.
    Type: Application
    Filed: January 3, 2017
    Publication date: February 1, 2018
    Inventors: Prateek Prasanna, Nathaniel Braman, Anant Madabhushi, Vinay Varadan, Lyndsay Harris, Salendra Singh
  • Publication number: 20170091411
    Abstract: Systems and methods for establishing a serial treatment plan to correct a muscular-skeletal deformity of a subject are described herein. A method can include receiving an image of a portion of the subject's body having the muscular-skeletal deformity, processing the image of the portion of the subject's body to establish a quantitative measure of the muscular-skeletal deformity, and determining a therapeutic state to correct the muscular-skeletal deformity. The therapeutic state can include an adjustment of the portion of the subject's body. In addition, at least one characteristic of the adjustment of the portion of the subject's body can be related to the quantitative measure of the muscular-skeletal deformity.
    Type: Application
    Filed: September 26, 2016
    Publication date: March 30, 2017
    Inventors: Jonathan Schoenecker, Nathaniel Braman, Attiyya Houston, Melena Mendive, Simeng Miao