Patents by Inventor Omar P. Tabbaa

Omar P. Tabbaa has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20230118974
    Abstract: Technologies for identifying genetic engineering proteins, organisms, and context signatures include a computing device that may be in communication with multiple client devices. The technologies include receiving a query sequence for a biological specimen, determining an alignment of the query sequence for regions of interest, and determining whether a match exists upstream or downstream from the region of interest in a predetermined database of genetic engineering context signatures. The search range may be predetermined based on each context signature. The technologies further include determining an alignment of the query sequence against a predetermined database of sequences indicative of genetic engineering, and determining whether a similarity score of the alignment exceeds a predetermined threshold. The database may include a genetic engineering protein database or a genetic engineering organism database. Other embodiments are described and claimed.
    Type: Application
    Filed: October 19, 2022
    Publication date: April 20, 2023
    Inventors: Omar P. TABBAA, Craig M. BARTLING, Brett R. FOWLE, Patrick FULLERTON, Bryan GEMLER, Carrie HOWLAND, Danielle J. HUK, Zachary R. SHANK
  • Publication number: 20220115089
    Abstract: Illustrative embodiments of technologies for nucleotide sequence screening are disclosed. In one illustrative embodiment, a system may include a server to communicate with a remote frontend over a network in order to receive a request to screen one or more nucleotide sequences for hazardous content and to report a result of the screening. The system may also include a compute engine to compare each nucleotide sequence to each of a plurality of reference sequences stored in a reference database, to detect whether hazardous content is present in each nucleotide sequence based upon the comparison of that nucleotide sequence to each of the plurality of reference sequences, and to assign one of a plurality of threat levels to each nucleotide sequence based upon the detection of whether hazardous content is present in that nucleotide sequence. The reported result may include the threat level assigned to each nucleotide sequence.
    Type: Application
    Filed: December 23, 2021
    Publication date: April 14, 2022
    Inventors: Sachin Rudraraju, Omar P. Tabbaa
  • Patent number: 11232852
    Abstract: Illustrative embodiments of technologies for nucleotide sequence screening are disclosed. In one illustrative embodiment, a system may include a server to communicate with a remote frontend over a network in order to receive a request to screen one or more nucleotide sequences for hazardous content and to report a result of the screening. The system may also include a compute engine to compare each nucleotide sequence to each of a plurality of reference sequences stored in a reference database, to detect whether hazardous content is present in each nucleotide sequence based upon the comparison of that nucleotide sequence to each of the plurality of reference sequences, and to assign one of a plurality of threat levels to each nucleotide sequence based upon the detection of whether hazardous content is present in that nucleotide sequence. The reported result may include the threat level assigned to each nucleotide sequence.
    Type: Grant
    Filed: December 5, 2019
    Date of Patent: January 25, 2022
    Assignee: Battelle Memorial Institute
    Inventors: Sachin Rudraraju, Omar P. Tabbaa
  • Publication number: 20200185061
    Abstract: Illustrative embodiments of technologies for nucleotide sequence screening are disclosed. In one illustrative embodiment, a system may include a server to communicate with a remote frontend over a network in order to receive a request to screen one or more nucleotide sequences for hazardous content and to report a result of the screening. The system may also include a compute engine to compare each nucleotide sequence to each of a plurality of reference sequences stored in a reference database, to detect whether hazardous content is present in each nucleotide sequence based upon the comparison of that nucleotide sequence to each of the plurality of reference sequences, and to assign one of a plurality of threat levels to each nucleotide sequence based upon the detection of whether hazardous content is present in that nucleotide sequence. The reported result may include the threat level assigned to each nucleotide sequence.
    Type: Application
    Filed: December 5, 2019
    Publication date: June 11, 2020
    Inventors: Sachin Rudraraju, Omar P. Tabbaa