Patents by Inventor Omer Ad
Omer Ad has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).
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Publication number: 20240118280Abstract: Aspects of the disclosure relate to methods and compositions for identifying, isolating, and/or sequencing a target protein or peptide from a sample of proteins or peptides.Type: ApplicationFiled: June 15, 2023Publication date: April 11, 2024Applicant: Quantum-Si IncorporatedInventors: Omer Ad, Robert E. Boer
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Publication number: 20230192761Abstract: The present disclosure relates to compounds and methods for selective C-terminal functionalization of peptides. In certain embodiments, the compounds have improved water-solubility, and are suitable for use in connection with peptide sequencing methodologies.Type: ApplicationFiled: June 10, 2022Publication date: June 22, 2023Applicant: Quantum-Si IncorporatedInventors: Haidong Huang, Roger Nani, Omer Ad, Brian Reed, Matthew Dyer, Robert E. Boer
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Publication number: 20220324910Abstract: The present disclosure is related to peptides comprising modified aspartic acid and glutamic acid moieties, methods of making such peptides, and methods of using such modified peptides to selectively direct cleavage of peptide bonds. Selective peptide bond cleavage is advantageous in peptide sequencing applications, such as automated peptide sequencing applications.Type: ApplicationFiled: March 31, 2022Publication date: October 13, 2022Applicant: Quantum-Si IncorporatedInventors: Omer Ad, Haidong Huang
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Publication number: 20220306677Abstract: Compositions and methods of making hybrid polypeptides and other polymers are disclosed. For example, functionalized tRNA having a functional molecule including a benzoic acid or benzoic acid derivative acylated to the 3? nucleotide of a tRNA are provided. Functionalized tRNA having a functional molecule including a malonic acid or malonic acid derivative acylated to the 3? nucleotide of a tRNA are also provided. Methods of using the functionalized tRNA for making compounds including the functional molecule are also provided. The methods typically include providing or expressing a messenger RNA (mRNA) encoding the target polypeptide in a translation system including one or more functionalized tRNA wherein each functionalized tRNA recognizes at least one codon such that its functional molecule is incorporated into the polypeptide or other polymer during translation. The incorporation of the functional molecule can occur in vitro in a cell-free translation system, or in vivo in a host cell.Type: ApplicationFiled: June 4, 2020Publication date: September 29, 2022Inventors: Omer Ad, Kyle S. Hoffman, Andrew G. Cairns, Aaron L. Featherston, Scott J. Miller, Dieter Soll, Alanna Schepartz
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Publication number: 20220228188Abstract: Aspects of this disclosure related to methods, articles, kits, and/or systems for the preparation and/or study of one or more target molecules in a sample. In some embodiments, a target molecule is a peptide, a protein, or a fragment or derivative thereof. Through the use of methods, articles, kits, and/or systems of the instant disclosure, target molecules may, in some embodiment, be more readily sequenced or prepared for sequencing.Type: ApplicationFiled: January 19, 2022Publication date: July 21, 2022Applicant: Quantum-Si IncorporatedInventors: Michele Millham, Jonathan C. Schultz, Omer Ad, Caixia Lv
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Publication number: 20220186295Abstract: Aspects of the disclosure provide methods of determining molecular barcode content based on binding interactions between a barcode recognition molecule and a molecular barcode. In some aspects, the disclosure relates to methods comprising contacting a molecular barcode with a barcode recognition molecule that binds to one or more sites on the molecular barcode, detecting a series of signal pulses, and determining the barcode content based on a barcode-specific pattern in the series of signal pulses.Type: ApplicationFiled: December 15, 2021Publication date: June 16, 2022Applicant: Quantum-Si IncorporatedInventors: Omer Ad, Robert E. Boer, Evan McCormack, Brianna Leigh Haining, Thomas Raymond Thurston, Brian Reed
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Publication number: 20220186297Abstract: Methods and devices for ultrasensitive detection of target molecules (e.g., target nucleic acids or target proteins) from a biological sample are provided herein. In some embodiments, methods and devices enable ultrasensitive determination of the concentration of target molecules.Type: ApplicationFiled: December 15, 2021Publication date: June 16, 2022Applicant: Quantum-Si IncorporatedInventors: Brian Reed, An Li, Omer Ad, Haidong Huang, Guojun Chen
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Patent number: 11358981Abstract: The present disclosure relates to compounds and methods for selective C-terminal functionalization of peptides. In certain embodiments, the compounds have improved water-solubility, and are suitable for use in connection with peptide sequencing methodologies.Type: GrantFiled: January 20, 2021Date of Patent: June 14, 2022Assignee: Quantum-Si IncorporatedInventors: Haidong Huang, Roger Nani, Omer Ad, Robert E. Boer
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Publication number: 20210379591Abstract: Methods and devices for preparing target molecules (e.g., target nucleic acids or target proteins) from a biological sample are provided herein. In some embodiments, methods and devices involve sample lysis, sample fragmentation, enrichment of target molecule(s), and/or functionalization of target molecule(s).Type: ApplicationFiled: April 21, 2021Publication date: December 9, 2021Applicant: Quantum-Si IncorporatedInventors: Jonathan M. Rothberg, John H. Leamon, Jonathan C. Schultz, Michele Millham, Caixia Lv, Haidong Huang, Roger Nani, Omer Ad, Brian Reed, Matthew Dyer, Robert E. Boer
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Publication number: 20210354134Abstract: Methods and devices for preparing target molecules (e.g., target nucleic acids or target proteins) from a biological sample are provided herein. In some embodiments, methods and devices involve sample lysis, sample fragmentation, enrichment of target molecule(s), and/or functionalization of target molecule(s).Type: ApplicationFiled: April 21, 2021Publication date: November 18, 2021Applicant: Quantum-Si IncorporatedInventors: Jonathan M. Rothberg, John H. Leamon, Jonathan C. Schultz, Michele Millham, Caixia Lv, Haidong Huang, Roger Nani, Omer Ad, Brian Reed, Matthew Dyer, Robert E. Boer
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Publication number: 20210354133Abstract: Methods and devices for preparing target molecules (e.g., target nucleic acids or target proteins) from a biological sample are provided herein. In some embodiments, methods and devices involve sample lysis, sample fragmentation, enrichment of target molecule(s), and/or functionalization of target molecule(s).Type: ApplicationFiled: April 21, 2021Publication date: November 18, 2021Applicant: Quantum-Si IncorporatedInventors: Jonathan M. Rothberg, John H. Leamon, Jonathan C. Schultz, Michele Millham, Caixia Lv, Haidong Huang, Roger Nani, Omer Ad, Brian Reed, Matthew Dyer, Robert E. Boer
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Publication number: 20210331170Abstract: Methods and devices for preparing target molecules (e.g., target nucleic acids or target proteins) from a biological sample are provided herein. In some embodiments, methods and devices involve sample lysis, sample fragmentation, enrichment of target molecule(s), and/or functionalization of target molecule(s).Type: ApplicationFiled: April 21, 2021Publication date: October 28, 2021Applicant: Quantum-Si IncorporatedInventors: Jonathan M. Rothberg, John H. Leamon, Jonathan C. Schultz, Michele Millham, Caixia Lv, Haidong Huang, Roger Nani, Omer Ad, Brian Reed, Matthew Dyer, Robert E. Boer
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Publication number: 20210221839Abstract: The present disclosure relates to compounds and methods for selective C-terminal functionalization of peptides. In certain embodiments, the compounds have improved water-solubility, and are suitable for use in connection with peptide sequencing methodologies.Type: ApplicationFiled: January 20, 2021Publication date: July 22, 2021Applicant: Quantum-Si IncorporatedInventors: Haidong Huang, Roger Nani, Omer Ad, Brian Reed, Matthew Dyer, Robert E. Boer