Patents by Inventor Philip A. Beachy

Philip A. Beachy has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20080058298
    Abstract: The present invention makes available assays and reagents inhibiting paracrine and/or autocrine signals produced by a hedgehog protein or aberrant activation of a hedgehog signal transduction pathway, e.g., which involve the use of a steroidal alkaloid or other small molecule.
    Type: Application
    Filed: August 20, 2007
    Publication date: March 6, 2008
    Inventors: Philip Beachy, Michael Cooper, Jeffrey Porter
  • Patent number: 7291626
    Abstract: The present invention makes availables assays and reagents inhibiting paracrine and/or autocrine signals produced by a hedgehog protein or aberrant activation of a hedgehog signal transduction pathway, e.g., which involve the use of a steroidal alkaloid or other small molecule.
    Type: Grant
    Filed: November 8, 2000
    Date of Patent: November 6, 2007
    Assignee: John Hopkins University School of Medicine
    Inventors: Philip A. Beachy, Michael K. Cooper, Jeffrey A. Porter
  • Publication number: 20070231828
    Abstract: Elevated Hedgehog (Hh) pathway activity, including ligand stimulated Hh pathway activity, was detected in prostate tumors, and determined to be associated with growth and proliferation of the cancer cells. Accordingly, methods are provided for treating a prostate cancer associated with elevated Hh pathway activity by reducing or inhibiting the Hh pathway activity. Also provided are methods of identifying a prostate tumor of a subject as, or as capable of becoming lethal and/or metastatic.
    Type: Application
    Filed: November 7, 2006
    Publication date: October 4, 2007
    Applicant: Johns Hopkins University
    Inventors: Philip Beachy, David Berman, Sunil Karhadkar, Edward Schaeffer, Angelo DeMarzo
  • Publication number: 20070232661
    Abstract: Aromatic compounds for treating various diseases and pathologies are disclosed. The methods use of such compounds are also provided. Accordingly, the present invention makes available methods and compositions for inhibiting aberrant growth states resulting from hedgehog gain-of-function, ptc loss-of-function or smoothened gain-of-function.
    Type: Application
    Filed: September 29, 2004
    Publication date: October 4, 2007
    Inventors: Philip Beachy, James Chen, Anssi Taipale
  • Publication number: 20070218475
    Abstract: The methods of the invention allow extremely high throughput screening of chemicals against a large number of pharmacologically relevant targets. All of the pharmacologically relevant targets are expressed in cells, which are then screened against a fluorescently-tagged combinatorial library. Binding of the small molecules to the cells is then detected by fluorescence activated cell sorting or imaging.
    Type: Application
    Filed: November 21, 2006
    Publication date: September 20, 2007
    Inventors: Philip Beachy, Anssi Taipale, James Chen
  • Publication number: 20070219257
    Abstract: Aromatic compounds for treating various diseases and pathologies are disclosed. The methods use of such compounds are also provided. Accordingly, the present invention makes available methods and compositions for inhibiting aberrant growth states in cells having Wnt receptors.
    Type: Application
    Filed: September 29, 2004
    Publication date: September 20, 2007
    Inventors: Philip Beachy, James Chen, Randall Mann
  • Patent number: 7220838
    Abstract: The present invention provides two novel polypeptides, referred to as the “N” and “C” fragments of hedgehog, or N-terminal and C-terminal fragments, respectively, which are derived after specific cleavage at a G?CF site recognized by the autoproteolytic domain in the native protein. Also included are sterol-modified hedgehog polypeptides and functional fragments thereof. Methods of identifying compositions which affect hedgehog activity based on inhibition of cholesterol modification of hedgehog protein are described.
    Type: Grant
    Filed: June 11, 2003
    Date of Patent: May 22, 2007
    Assignee: The Johns Hopkins University School of Medicine
    Inventors: Philip A. Beachy, Jeffrey A. Porter
  • Publication number: 20070053883
    Abstract: Methods are provided in which a sterol-depleting agent such as ?-cyclodextrin (?CD), is used to modulate signaling by a differentiation signaling protein such as Hedgehog protein or a BMP in vitro. As illustrated herein, the use of ?CD in conjunction with Sonic Hedgehog N-terminal peptide (ShhN) causes substantially all of the cells in neural plate explants to differentiate as neurons, such as motor neurons. Also provided are cell therapy methods and screening methods that rely on the modulation of signaling of a differentiation signaling protein such as Hedgehog, by a sterol-depleting agent such as ?CD.
    Type: Application
    Filed: March 24, 2004
    Publication date: March 8, 2007
    Applicant: THE JOHNS HOPKINS UNIVERSITY
    Inventors: Philip Beachy, Michael Cooper
  • Publication number: 20060211114
    Abstract: The present invention provides transcription factors associated with the hedgehog signaling pathway that are regulated by dephosphorylation by phosphatases. Hedgehog response elements (HRE) that interact with the dephosphorylated transcription factors are also provided as well as methods for identifying compounds that are phosphatase inhibitors. Methods of treating tumors in a subject by modulating the phosphorylation of the transcription factor are also included.
    Type: Application
    Filed: May 22, 2006
    Publication date: September 21, 2006
    Inventors: Philip Beachy, Ming-Jer Tsai, Sophia Tsai, Venkatesh Krishnan, Chien-Huan Chen
  • Patent number: 7098196
    Abstract: The present invention makes available, inter alia, methods and reagents for modulating smoothened-dependent pathway activation. In certain embodiments, the subject methods can be used to counteract the phenotypic effects of unwanted activation of a hedgehog pathway, such as resulting from hedgehog gain-of-function, ptc loss-of-function or smoothened gain-of-function mutations.
    Type: Grant
    Filed: October 13, 2000
    Date of Patent: August 29, 2006
    Assignee: Johns Hopkins University School of Medicine
    Inventors: Philip A. Beachy, James K. Chen, Anssi J. Taipale
  • Publication number: 20060142245
    Abstract: The present invention makes availables assays and reagents inhibiting paracrine and/or autocrine signals produced by a hedgehog protein or aberrant activation of a hedgehog signal transduction pathway, e.g., which involve the use of a steroidal alkaloid or other small molecule.
    Type: Application
    Filed: November 11, 2005
    Publication date: June 29, 2006
    Applicant: John Hopkins University School of Medicine
    Inventors: Philip Beachy, Michael Cooper, Jeffery Porter
  • Publication number: 20060128639
    Abstract: The present invention makes available, inter alia, methods and reagents for modulating smoothened-dependent pathway activation. In certain embodiments, the subject methods can be used to counteract the phenotypic effects of unwanted activation of a hedgehog pathway, such as resulting from hedgehog gain-of-function, ptc loss-of-function or smoothened gain-of-function mutations.
    Type: Application
    Filed: January 23, 2006
    Publication date: June 15, 2006
    Applicant: John Hopkins University School of Medicine
    Inventor: Philip Beachy
  • Patent number: 7049090
    Abstract: The present invention provides transcription factors associated with the hedgehog signaling pathway that are regulated by dephosphorylation by phosphatases. Hedgehog response elements (HRE) that interact with the dephosphorylated transcription factors are also provided as well as methods for identifying compounds that are phosphatase inhibitors. Methods of treating tumors in a subject by modulating the phosphorylation of the transcription factor are also included.
    Type: Grant
    Filed: October 1, 2003
    Date of Patent: May 23, 2006
    Assignees: The Johns Hopkins University School of Medicine, Baylor College of Medicine
    Inventors: Philip A. Beachy, Ming-Jer Tsai, Sophia Tsai, Venkatesh Krishnan, Chien-Huan Chen
  • Publication number: 20050222087
    Abstract: The present invention makes available methods and reagents for inhibiting aberrant growth states resulting from hedgehog gain-of-function, ptc loss-of-function or smoothened gain-of-function comprising contacting the cell with a hedgehog antagonist, such as a small molecule, in a sufficient amount to aberrant growth state, e.g., to agonize a normal ptc pathway or antagonize smoothened or hedgehog activity. Such methods and reagents may also inhibit the hedgehog pathway in normal cells, e.g., where normal levels of hedgehog signalling are unwanted.
    Type: Application
    Filed: April 22, 2003
    Publication date: October 6, 2005
    Inventors: Philip Beachy, James Chen, Anssi Taipale
  • Publication number: 20050208545
    Abstract: The invention relates to hedgehog proteins that are involved in signaling developmental processes. The proteins of the invention modulate differentiation of neural plate. Also provided are methods for identifying compounds that modulate early events in development and more particularly to methods to identify compounds that modulate differentiation of neural plate using hedgehog proteins as ligands for the patched receptor.
    Type: Application
    Filed: January 12, 2005
    Publication date: September 22, 2005
    Inventor: Philip Beachy
  • Patent number: 6942988
    Abstract: The invention relates to hedgehog proteins that are involved in signaling developmental processes. The proteins of the invention modulate differentiation of neural plate. Also provided are methods for identifying compounds that modulate early events in development and more particularly to methods to identify compounds that modulate differentiation of neural plate using hedgehog proteins as ligands for the patched receptor.
    Type: Grant
    Filed: September 24, 2001
    Date of Patent: September 13, 2005
    Assignee: The Johns Hopkins University School of Medicine
    Inventor: Philip A. Beachy
  • Patent number: 6911528
    Abstract: The present invention provides two novel polypeptides, referred to as the “N” and “C” fragments of hedgehog, or N-terminal and C-terminal fragments, respectively, which are derived after specific cleavage at a G?CF site recognized by the autoproteolytic domain in the native protein. Also included are sterol-modified hedgehog polypeptides and functional fragments thereof. Methods of identifying compositions which affect hedgehog activity based on inhibition of cholesterol modification of hedgehog protein are described.
    Type: Grant
    Filed: May 2, 2000
    Date of Patent: June 28, 2005
    Assignee: The Johns Hopkins University School of Medicine
    Inventors: Philip A. Beachy, Jeffrey A. Porter
  • Patent number: 6867216
    Abstract: The present invention makes availables assays and reagents inhibiting paracrine and/or autocrine signals produced by a hedgehog protein or aberrant activation of a hedgehog signal transduction pathway, e.g., which involve the use of a steroidal alkaloid or other small molecule.
    Type: Grant
    Filed: November 8, 2000
    Date of Patent: March 15, 2005
    Assignee: Johns Hopkins University School of Medicine
    Inventors: Philip A. Beachy, Michael K. Cooper, Jeffrey A. Porter
  • Patent number: 6733971
    Abstract: The present invention provides transcription factors associated with the hedgehog signaling pathway that are regulated by dephosphorylation by phosphatases. Hedgehog response elements (HRE) that interact with the dephosphorylated transcription factors are also provided as well as methods for identifying compounds that are phosphatase inhibitors. Methods of treating tumors in a subject by modulating the phosphorylation of the transcription factor are also included.
    Type: Grant
    Filed: August 21, 2001
    Date of Patent: May 11, 2004
    Assignees: Baylor College of Medicine, The Johns Hopkins University School of Medicine
    Inventors: Philip A. Beachy, Ming-Jer Tsai, Sophia Tsai, Venkatesh Krishnan, Chien-Huan Chen
  • Publication number: 20040082036
    Abstract: The present invention provides transcription factors associated with the hedgehog signaling pathway that are regulated by dephosphorylation by phosphatases. Hedgehog response elements (HRE) that interact with the dephosphorylated transcription factors are also provided as well as methods for identifying compounds that are phosphatase inhibitors. Methods of treating tumors in a subject by modulating the phosphorylation of the transcription factor are also included.
    Type: Application
    Filed: October 1, 2003
    Publication date: April 29, 2004
    Applicants: THE JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE, BAYLOR COLLEGE OF MEDICINE
    Inventors: Philip A. Beachy, Ming-Jer Tsai, Sophia Tsai, Venkatesh Krishnan, Chien-Huan Chen