Patents by Inventor Philip Cole

Philip Cole has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20110257086
    Abstract: The invention provides inhibitors of ghrelin O-acyltransferase, and methods of making and using them. In some embodiments, the invention provides bisubstrate analog inhibitors of ghrelin O-acyltransferase, which can be effective in treating, for example, obesity and diabetes mellitus.
    Type: Application
    Filed: September 18, 2009
    Publication date: October 20, 2011
    Inventors: Philip A. Cole, Bradley P. Barnett, Yousang Hwang, Jef D. Boeke
  • Patent number: 7996185
    Abstract: A machine data acquisition system is disclosed. The data acquisition system may include a sensor disposed on a machine and configured to produce a signal indicative of an operational parameter of the machine. The system may also include a data processor and controller configured to convert the signal into a plurality of parameter data points. The system may further include a primary data circular buffer disposed on the machine and configured to store the plurality of parameter data points. Additionally, a variable resolution circular buffer may be disposed on the machine and configured to store a compressed parameter data point calculated from the plurality of parameter data points.
    Type: Grant
    Filed: April 29, 2008
    Date of Patent: August 9, 2011
    Assignee: Caterpillar Inc.
    Inventors: Steven Wayne O'Neal, Mark Ryan Hazen, Todd Philip Cole, David Charles Janik, Joseph Anthony Lang
  • Publication number: 20100216853
    Abstract: The present invention relates to a method for identifying compounds that modulate the activity of p300/CBP. Compounds of the invention are identified by designing or screening for a compound which binds to at least one amino acid residue of the newly identified lysine-CoA inhibitor binding site, L1 loop, electronegative pocket, or electronegative groove of the HAT domain of p300/CBP and testing the compound for its ability to modulate the activity of p300/CBP. Compositions and methods for preventing or treating diseases or disorders associated with p300/CBP are also provided as is a method for producing a semi-synthetic HAT domain.
    Type: Application
    Filed: June 19, 2008
    Publication date: August 26, 2010
    Inventors: Ronen Marmorstein, Xin Liu, Philip A. Cole, Ling Wang, Erin M. Bowers, David J. Meyers, Chandrani Mukherjee
  • Publication number: 20100120678
    Abstract: The invention provides methods and compositions for the modulation of EGFR activity, in particular, inhibition of EGFR activation through an allosteric mechanism is discloses, as is a method for targeted drug discovery and design based on models of the three dimensional structure of the kinase domains of the protein dimers.
    Type: Application
    Filed: October 15, 2007
    Publication date: May 13, 2010
    Applicant: The Regents of the University of California The Office of the President
    Inventors: John Kuriyan, Xuewu Zhang, Philip Cole
  • Patent number: 7711842
    Abstract: A method for data transfer between a client system and a server comprises receiving one or more user-defined file transfer specifications and establishing a communication channel between a client system and a server system based on the file transfer specifications. The method also includes initializing transfer of operation data between the client system and the server system via the communication channel. The method further includes providing an exception notification to one or more user-designated recipients if the transfer of the operation data between the client system and the server system is inconsistent with the file transfer specifications.
    Type: Grant
    Filed: June 29, 2007
    Date of Patent: May 4, 2010
    Assignee: Caterpillar Inc.
    Inventors: Yang Liu, Larry James Wilson, Donald Franklin Smith, Jr., William Todd Hasty, Todd Philip Cole
  • Publication number: 20090271151
    Abstract: A machine data acquisition system is disclosed. The data acquisition system may include a sensor disposed on a machine and configured to produce a signal indicative of an operational parameter of the machine. The system may also include a data processor and controller configured to convert the signal into a plurality of parameter data points. The system may further include a primary data circular buffer disposed on the machine and configured to store the plurality of parameter data points. Additionally, a variable resolution circular buffer may be disposed on the machine and configured to store a compressed parameter data point calculated from the plurality of parameter data points.
    Type: Application
    Filed: April 29, 2008
    Publication date: October 29, 2009
    Inventors: Steven Wayne O'Neal, Mark Ryan Hazen, Todd Philip Cole, David Charles Janik, Joseph Anthony Lang
  • Publication number: 20090006540
    Abstract: A method for data transfer between a client system and a server comprises receiving one or more user-defined file transfer specifications and establishing a communication channel between a client system and a server system based on the file transfer specifications. The method also includes initializing transfer of operation data between the client system and the server system via the communication channel. The method further includes providing an exception notification to one or more user-designated recipients if the transfer of the operation data between the client system and the server system is inconsistent with the file transfer specifications.
    Type: Application
    Filed: June 29, 2007
    Publication date: January 1, 2009
    Inventors: Yang Liu, Larry James Wilson, Donald Franklin Smith, JR., William Todd Hasty, Todd Philip Cole
  • Patent number: 7045617
    Abstract: Protein kinase inhibitors have applications as anti-cancer therapeutic agents and biological tools in cell signalling. Potent and selective bisubstrate inhibitors for the insulin receptor tyrosine kinase are based on a phosphoryl transfer mechanism involving a dissociative transition state. One such inhibitor is synthesized by linking ATP?S to a peptide substrate analog via a two-carbon spacer. The compound is a high-affinity competitive inhibitor against both nucleotide and peptide substrate and shows a slow off-rate. A crystal structure of this inhibitor bound to the tyrosine kinase domain of the insulin receptor confirms the key design features inspired by a dissociative transition state, and reveal that the linker takes part in the octahedral coordination of an active site Mg2+ ion.
    Type: Grant
    Filed: March 21, 2001
    Date of Patent: May 16, 2006
    Assignees: Mount Sinai School of Medicine, Johns Hopkins University
    Inventors: Philip A. Cole, Keykavous Parang, Ararat Abloogu, Ronald A. Kohanski, Aliya Courtney
  • Publication number: 20050215906
    Abstract: By providing a single house (21) which incorporates an elongated probe (22) receiving zone interconnected to a pump member (55), a plurality of automated valves (51-54), a disinfectant dispensing chamber (20), a water supply (41), and a control system for automatically cycling each of the components to achieve the desired result, a fully automated disinfection system (20) for transesophageal ultrasonic probes is achieved. In accordance with the present invention, a simple, easily employed, convenient, fully integrated system (20) is attained for quickly and easily receiving the transesophageal ultrasonic probe in its entirety, supporting the electronic bearing head portion independently from the disinfection portion, and automatically performing various disinfection and rinse cycles for providing a completely disinfected ultrasonic probe member ready for use.
    Type: Application
    Filed: June 23, 2003
    Publication date: September 29, 2005
    Inventors: Philip Coles, Gregory Dobbyn
  • Patent number: 6875594
    Abstract: The present invention provides a method of cleaving a recombinantly expressed protein from an intein and ligating the protein to a peptide containing an N-terminal cysteine having an unoxidized sulfhydryl side chain which comprises contacting the protein with the peptide in a reaction solution comprising a conjugated thiophenol, thereby forming a C-terminal thioester of the recombinant protein which spontaneously rearranges intramolecularly to form an amide bond linking the protein to the peptide.
    Type: Grant
    Filed: July 12, 2001
    Date of Patent: April 5, 2005
    Assignee: The Rockefeller University
    Inventors: Tom W. Muir, Philip A. Cole, Dolan Sondhi, Konstantine Severinov
  • Patent number: 6564232
    Abstract: A method and apparatus in a data processing system for managing distribution of data structures. A first data structure is received including a first version identifier. The version identifier is stored for the first data structure. A second structure is received including a second version identifier. Responsive to receiving a second data structure, a determination is made as to whether the second data structure is a replacement for the first data structure. Responsive to the second data structure being a replacement for the first data structure, a determination is made as to whether the first version identifier is different from the second version identifier. Responsive to a determination that the first version identifier is different from the second version identifier, the first data structure is replaced with the second data structure.
    Type: Grant
    Filed: June 30, 1999
    Date of Patent: May 13, 2003
    Assignee: International Business Machines Corporation
    Inventors: Gary Philip Cole, John Winans Pozdro
  • Publication number: 20020151006
    Abstract: The present invention provides a method of cleaving a recombinantly expressed protein from an intein and ligating the protein to a peptide containing an N-terminal cysteine having an unoxidized sulfhydryl side chain which comprises contacting the protein with the peptide in a reaction solution comprising a conjugated thiophenol, thereby forming a C-terminal thioester of the recombinant protein which spontaneously rearranges intramolecularly to form an amide bond linking the protein to the peptide.
    Type: Application
    Filed: July 12, 2001
    Publication date: October 17, 2002
    Inventors: Tom W. Muir, Philip A. Cole, Jeffrey M. Friedman, Dolan Sondhi, Konstantine Severinov
  • Patent number: 6369030
    Abstract: Histone acetyltransferase inhibitors, especially those that are differentiate between p300 and PCAF histone acetyltransferase; also therapeutic processes comprising their administration to humans.
    Type: Grant
    Filed: November 29, 1999
    Date of Patent: April 9, 2002
    Assignee: The Rockfeller University
    Inventors: Philip A. Cole, Raymond E. Soccio, Ontario D. Lau, Ehab M. Khalil, Tapas K. Kundu, Robert G. Roeder
  • Publication number: 20020031820
    Abstract: Protein kinase inhibitors have applications as anti-cancer therapeutic agents and biological tools in cell signalling. Potent and selective bisubstrate inhibitors for the insulin receptor tyrosine kinase are based on a phosphoryl transfer mechanism involving a dissociative transition state. One such inhibitor is synthesized by linking ATP&ggr;S to a peptide substrate analog via a two-carbon spacer. The compound is a high-affinity competitive inhibitor against both nucleotide and peptide substrate and shows a slow off-rate. A crystal structure of this inhibitor bound to the tyrosine kinase domain of the insulin receptor confirms the key design features inspired by a dissociative transition state, and reveal that the linker takes part in the octahedral coordination of an active site Mg2+ ion.
    Type: Application
    Filed: March 21, 2001
    Publication date: March 14, 2002
    Inventors: Philip A. Cole, Keykavous Parang, Ararat Abloogu, Ronald A. Kohanski, Aliya Courtney
  • Patent number: 6156526
    Abstract: A detailed three-dimensional structure for the complex formed between Ras and the Son of sevenless (Sos) protein is provided. Crystals of this complex are also included in the invention. The present invention farther provides procedures for identifying agents that can inhibit tumor proliferation through the use of rational drug design predicated on the crystals and crystallographic data disclosed.
    Type: Grant
    Filed: July 21, 1998
    Date of Patent: December 5, 2000
    Assignees: The Rockerfeller University, The Research Foundation of State University of New York
    Inventors: Ann Boriack-Sjodin, S. Mariana Margarit, Dafna Bar-Sagi, Philip Cole, John Kuriyan
  • Patent number: 6117663
    Abstract: A detailed three-dimensional structure for the complex formed between Ras and the Son of sevenless (Sos) protein is provided. Crystals of this complex are also included in the invention. The present invention further provides procedures for identifying agents that can inhibit tumor proliferation through the use of rational drug design predicated on the crystals and crystallographic data disclosed.
    Type: Grant
    Filed: July 19, 1999
    Date of Patent: September 12, 2000
    Assignees: The Rockefeller University, The Research Foundation of State University of New York
    Inventors: Ann Boriack-Sjodin, S. Mariana Margarit, Dafna Bar-Sagi, Philip Cole, John Kuriyan
  • Patent number: 5990094
    Abstract: This invention is directed to a compound having the formula I. ##STR1## This invention is directed to a pharmaceutical composition comprising a compound which inhibits serotonin N-acetyltransferase having the formula I and a pharmaceutical acceptable carrier. The present invention relates to novel compounds and analogs which inhibit the serotonin N-acetyltransferase enzyme, and to processes for their preparation.
    Type: Grant
    Filed: January 27, 1998
    Date of Patent: November 23, 1999
    Assignee: The Rockefeller University
    Inventors: Philip A. Cole, Ehab Khalil