Abstract: A non-invasive method and apparatus are described for measuring the oxygen concentration in the infected cells of the nodules of nitrogen fixing plants in the laboratory or field. In many cases, this information can be used to estimate the nitrogenase activity, and therefore the nitrogen fixation rate, in these nodules since recent studies have shown that the oxygen concentration limits and controls nitrogenase activity under most environmental conditions. Using the same apparatus, a method to measure nodule respiration and nodule oxygen permeability is also described. The nodule oxygen concentration in the infected cells of nodules is maintained at very low levels and has not been measurable previously by non-invasive techniques.