Patents by Inventor Ralph Reid

Ralph Reid has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20080233618
    Abstract: Polypeptides and domains of leptomycin polyketide synthase and the nucleic acids encoding them are provided. Methods to prepare leptomycin, leptomycin analogs, and leptomycin derivatives are described, as are methods to prepare other polyketides using the nucleic acids encoding leptomycin polyketide synthase domains or modifying enzymes.
    Type: Application
    Filed: August 24, 2007
    Publication date: September 25, 2008
    Inventors: Zhihao Hu, Ralph Reid
  • Patent number: 7427493
    Abstract: Materials and methods to produce modified polyketides are disclosed. The biosynthesis, transfer and regulator genes for various sugars to effectuate polyketide modification are disclosed.
    Type: Grant
    Filed: June 30, 2003
    Date of Patent: September 23, 2008
    Assignee: Kosan Biosciences Incorporated
    Inventors: C. Richard Hutchinson, Leonard Katz, Ralph Reid, Zhihao Hu, Hugo Gramajo
  • Publication number: 20070269855
    Abstract: The invention relates to recombinant polyketide synthase enzymes, polyketide modifying proteins, and other proteins involved in polyketide biosynthesis or function. The invention provides domains of geldanamycin and herbimycin polyketide synthases, polynucleotides that encode such enzymes, and to host cells in which such encoding polynucleotides can be advantageously expressed.
    Type: Application
    Filed: January 16, 2007
    Publication date: November 22, 2007
    Inventors: Richard Hutchinson, Ralph Reid, Zhihao Hu, Andreas Rascher, Andreas Schirmer, Robert McDaniel
  • Patent number: 7288396
    Abstract: Polypeptides and domains of leptomycin polyketide synthase and the nucleic acids encoding them are provided. Methods to prepare leptomycin, leptomycin analogs, and leptomycin derivatives are described, as are methods to prepare other polyketides using the nucleic acids encoding leptomycin polyketide synthase domains or modifying enzymes.
    Type: Grant
    Filed: September 8, 2004
    Date of Patent: October 30, 2007
    Assignee: Kosan Biosciences Incorporated
    Inventors: Zhihao Hu, Ralph Reid
  • Patent number: 7192735
    Abstract: The invention pertains to isolated phosphopantetheinyl transferases, such as the E. coli acyl carrier protein synthase, which transfer a phosphopantetheinyl group onto a substrate. The enzyme can be purified from a natural source, produced recombinantly, or synthetically. Accordingly, the invention provides compositions and kits including phosphopantetheinyl transferases and host cells expressing phosphopantetheinyl transferases. The invention also provides nucleic acids encoding phosphopantetheinyl transferases and vectors comprising such nucleic acids. The invention further provides methods for phosphopantetheinylating a substrate in vitro or in vivo and methods for producing antibiotics in vitro or in vivo.
    Type: Grant
    Filed: September 30, 2002
    Date of Patent: March 20, 2007
    Assignees: President & Fellows of Harvard College, The Regents of the University of California
    Inventors: Ralph H. Lambalot, Amy M. Gehring, Ralph Reid, Christopher T. Walsh
  • Publication number: 20060079494
    Abstract: Resorcylic acid lactones having a C5-C6 cis double bond and a ketone at C7 and other compounds capable of Michael adduct formation are potent and stable inhibitors of a subset of protein kinases having a specific cysteine residue in the ATP binding site.
    Type: Application
    Filed: September 26, 2005
    Publication date: April 13, 2006
    Inventors: Daniel Santi, Ralph Reid, C. Hutchinson, Kurt Sundermann, Janice Lau
  • Publication number: 20050266434
    Abstract: Domains of ambruticin polyketide synthase and modification enzymes and polynucleotides encoding them are provided. Methods to prepare ambruticin in pharmaceutically useful quantities are described, as are methods to prepare ambruticin analogs and other polyketides using the polynucleotides encoding ambruticin synthase domains or modifying enzymes.
    Type: Application
    Filed: March 7, 2005
    Publication date: December 1, 2005
    Inventors: Christopher Reeves, Bryan Julien, Ralph Reid
  • Publication number: 20050233369
    Abstract: Domains of jerangolid polyketide synthase and modification enzymes and polynucleotides encoding them are provided. Methods to prepare jerangolid in pharmaceutically useful quantities are described, as are methods to prepare jerangolid analogs and other polyketides using the polynucleotides encoding jerangolid synthase domains or modifying enzymes.
    Type: Application
    Filed: April 18, 2005
    Publication date: October 20, 2005
    Inventors: Christopher Reeves, Ralph Reid
  • Publication number: 20050227316
    Abstract: The invention provides strategies, methods, vectors, reagents, and systems for production of synthetic genes, production of libraries of such genes, and manipulation and characterization of the genes and corresponding encoded polypeptides. In one aspect, the synthetic genes can encode polyketide synthase polypeptides and facilitate production of therapeutically or commercially important polyketide compounds.
    Type: Application
    Filed: April 7, 2004
    Publication date: October 13, 2005
    Applicant: Kosan Biosciences, Inc.
    Inventors: Daniel Santi, Sarah Kodumal, Ralph Reid, Kedar Patel
  • Publication number: 20050148045
    Abstract: Domains of fostriecin polyketide synthase and modification enzymes and polynucleotides encoding them are provided. Methods to prepare fostriecin in pharmaceutically useful quantities are described, as are methods to prepare fostriecin analogs and other polyketides using the polynucleotides encoding fostriecin polyketide synthase domains or modifying enzymes.
    Type: Application
    Filed: August 18, 2004
    Publication date: July 7, 2005
    Applicant: KOSAN BIOSCIENCES, INC., A Delaware corporation
    Inventors: Ralph Reid, Zhihao Hu, Li Tang
  • Publication number: 20050112726
    Abstract: Polypeptides and domains of leptomycin polyketide synthase and the nucleic acids encoding them are provided. Methods to prepare leptomycin, leptomycin analogs, and leptomycin derivatives are described, as are methods to prepare other polyketides using the nucleic acids encoding leptomycin polyketide synthase domains or modifying enzymes.
    Type: Application
    Filed: September 8, 2004
    Publication date: May 26, 2005
    Applicant: Kosan Biosciences, Inc.
    Inventors: Zhihao Hu, Ralph Reid
  • Publication number: 20050032184
    Abstract: Domains of disorazole polyketide synthase and polynucleotides encoding them are provided. Methods to prepare disorazoles in pharmaceutically useful quantities are described, as are methods to prepare disorazole analogs and other polyketides using the polynucleotides encoding disorazole polyketide synthase domains or modifying enzymes.
    Type: Application
    Filed: December 5, 2003
    Publication date: February 10, 2005
    Applicant: Kosan Biosciences, Inc.
    Inventors: Bryan Julien, Ralph Reid
  • Publication number: 20040203015
    Abstract: Materials and methods to produce modified polyketides are disclosed. The biosynthesis, transfer and regulator genes for various sugars to effectuate polyketide modification are disclosed.
    Type: Application
    Filed: June 30, 2003
    Publication date: October 14, 2004
    Inventors: C. Richard Hutchinson, Leonard Katz, Ralph Reid, Zhihao Hu, Hugo Gramajo
  • Publication number: 20030153053
    Abstract: Ketoreductase (KR) domains of modular polyketide synthase (PKS) enzymes can be inactivated by one or more point mutations in the domain. Replacement or insertion of a KR domain can be used to introduce a cis or trans double bond into a polyketide by appropriate selection or inactivation of the type of KR domain that codes for a particular stereochemical configuration of a hydroxyl moiety. Inactivation of a DH domain can be used to produce a polyketide having a hydroxyl moiety with a desired stereochemical configuration.
    Type: Application
    Filed: August 6, 2002
    Publication date: August 14, 2003
    Inventor: Ralph Reid
  • Publication number: 20030138879
    Abstract: The invention pertains to isolated phosphopantetheinyl transferases, such as the E. coli acyl carrier protein synthase, which transfer a phosphopantetheinyl group onto a substrate. The enzyme can be purified from a natural source, produced recombinantly, or synthetically. Accordingly, the invention provides compositions and kits including phosphopantetheinyl transferases and host cells expressing phosphopantetheinyl transferases. The invention also provides nucleic acids encoding phosphopantetheinyl transferases and vectors comprising such nucleic acids. The invention further provides methods for phosphopantetheinylating a substrate in vitro or in vivo and methods for producing antibiotics in vitro or in vivo.
    Type: Application
    Filed: September 30, 2002
    Publication date: July 24, 2003
    Applicant: President and Fellows of Harvard College
    Inventors: Ralph H. Lambalot, Amy M. Gehring, Ralph Reid, Christopher T. Walsh
  • Publication number: 20030124680
    Abstract: Three distinct primary regions of acyltransferase (AT) domains of modular polyketide synthases (PKS) can be changed by site-specific mutagenesis of the corresponding coding sequences to change the specificity of the domain and the structure of the polyketide produced by the PKS.
    Type: Application
    Filed: August 7, 2002
    Publication date: July 3, 2003
    Inventors: Christopher Reeves, Robert McDaniel, Ralph Reid
  • Patent number: 6579695
    Abstract: The invention pertains to isolated phosphopantetheinyl transferases, such as the E. coli acyl carrier protein synthase, which transfer a phosphopantetheinyl group onto a substrate. The enzyme can be purified from a natural source, produced recombinantly, or synthetically. Accordingly, the invention provides compositions and kits including phosphopantetheinyl transferases and host cells expressing phosphopantetheinyl transferases. The invention also provides nucleic acids encoding phosphopantetheinyl transferases and vectors comprising such nucleic acids. The invention further provides methods for phosphopantetheinylating a substrate in vitro or in vivo and methods for producing antibiotics in vitro or in vivo.
    Type: Grant
    Filed: October 11, 1996
    Date of Patent: June 17, 2003
    Assignees: President and Fellows of Harvard College, The Regents of the University of California
    Inventors: Ralph H. Lambalot, Amy M. Gehring, Ralph Reid, Christopher T. Walsh