Patents by Inventor Ramaswamy Krishnan

Ramaswamy Krishnan has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20230408376
    Abstract: Provided herein are systems for determining a stretch condition of a tissue and assessing the stiffness of the tissue. Also provided herein are methods for using the systems for measuring stiffness of a tissue, assessing the effect of an agent on a tissue, and identifying subjects having a disease or disorder associated with increased or decreased stiffness of a tissue.
    Type: Application
    Filed: June 16, 2023
    Publication date: December 21, 2023
    Applicants: Trustees of Boston University, Beth Israel Deaconess Medical Center, Inc.
    Inventors: Bela Suki, Jae Hun Kim, Joseph Hall, Ramaswamy Krishnan, Niccole Schaible
  • Publication number: 20230172849
    Abstract: The present disclosure relates to methods and formulations for treating respiratory viral infections by administering a statin by inhalation.
    Type: Application
    Filed: May 7, 2021
    Publication date: June 8, 2023
    Inventors: Amir A. Zeki, Ramaswamy Krishnan, Chandra C. Ghosh
  • Publication number: 20230154573
    Abstract: This disclosure relates generally to method and system for structure-based drug design using a multi-modal deep learning model. The method processes a target protein for designing at least one optimized molecule by using a multi-modal deep learning model. The GAT-VAE module obtains a latent vector of at least one active site graph comprising of key amino acid residues from the target protein. The SMILES-VAE module obtains at least one latent vector from the target protein. Further, the conditional molecular generator concatenates the active site graph with the latent vector to generate a set of molecules. The RL framework is iteratively performed on the concatenated latent vector to optimize at least one molecule by using the drug-target affinity (DTA) predictor module to predict an affinity value for the set of molecules towards the target protein. Further, at least one optimized molecule is designed with an affinity of the target protein.
    Type: Application
    Filed: October 19, 2022
    Publication date: May 18, 2023
    Applicant: Tata Consultancy Services Limited
    Inventors: Arijit ROY, Rajgopal SRINIVASAN, Sarveswara Rao VANGALA, Sowmya Ramaswamy KRISHNAN, Navneet BUNG, Gopalakrishnan BULUSU
  • Publication number: 20230014352
    Abstract: present disclosure relates to methods for relaxing airway smooth muscle tissue, alleviating or preventing bronchospasm, and treating lung diseases by administering an HMG-CoA reductase inhibitor (statin) directly to lung tissue by inhalation. The disclosure also relates to formulations and compositions useful for the practice of methods of the disclosure.
    Type: Application
    Filed: March 27, 2020
    Publication date: January 19, 2023
    Inventors: Amir A. ZEKI, Chandra C. GHOSH, Ramaswamy KRISHNAN
  • Publication number: 20220177422
    Abstract: Disclosed herein is a class of molecules termed remodilins that are effective in treating asthma, pulmonary fibrosis, and associated disorders. The molecules ameliorate asthma and pulmonary fibrosis symptoms by various mechanisms, including inhibiting airway smooth muscle contractile protein accumulation, reducing airway constrictor hyperresponsiveness, inhibiting bronchial fibroblast transformation into myofibroblasts, and/or treating or preventing airway or pulmonary fibrosis.
    Type: Application
    Filed: April 2, 2020
    Publication date: June 9, 2022
    Applicants: The University of Chicago, The United States of America,as Represented by the Secretary, Department of Health and Human Servic, President and Fellows of Harvard College, IIT Research Institute, Beth Israel Deaconess Medical Center, Inc.
    Inventors: Julian SOLWAY, Nickolai DULIN, Diane Luci, David MALONEY, Chan Young PARK, Jeffrey FREDBERG, David MCCORMICK, Ramaswamy KRISHNAN
  • Publication number: 20220084627
    Abstract: Conventionally, deep learning-based methods have shown some success in ligand-based drug design. However, these methods face data scarcity problems while designing drugs against novel targets. Embodiments of the present disclosure provide systems and methods that leverage the potential of deep learning and molecular modeling approaches to develop a drug design pipeline, which can be useful for cases where there is limited or no availability of target-specific ligand datasets. Inhibitors of other proteins, structurally similar to the target protein are screened at the active site of the target protein to create an initial target-specific dataset. Transfer learning is implemented to learn features of target-specific dataset and design new chemical entities/molecules using a deep generative model. A deep predictive model is used predict docking scores of newly designed/identified molecules.
    Type: Application
    Filed: December 29, 2020
    Publication date: March 17, 2022
    Applicant: Tata Consultancy Services Limited
    Inventors: Arijit ROY, Sowmya RAMASWAMY KRISHNAN, Navneet BUNG, Gopalakrishnan BULUSU
  • Publication number: 20220040207
    Abstract: Disclosed herein is a class of molecules termed remodilins that inhibit serum response factor (SRF). By inhibiting SRF, a number of downstream pathways can be targeted. The remodilins can be used to treat glaucoma, inhibit tumor cell growth, inhibit tumor metastasis, inhibit hypoxia-induced response, and/or reduce cellular metabolism.
    Type: Application
    Filed: April 2, 2020
    Publication date: February 10, 2022
    Applicants: The University of Chicago, The United States of America as Represented by the Secretary Department of Health and Human Services, President and Fellows of Harvard College, IIT Research Institute, Beth Israel Deaconess Medical Center, Inc.
    Inventors: Julian SOLWAY, Nickolai DULIN, Marsha ROSNER, Gokhan MUTLU, Diane LUCI, David MALONEY, Chan Young PARK, Jeffrey FREDBERG, David MCCORMICK, Ramaswamy KRISHNAN
  • Patent number: 9606108
    Abstract: A platform for biological assays includes a base substrate providing structural support to the platform, at least one surface of the base substrate coated with position markers, a first deformable layer positioned on top of the base substrate, and a second deformable layer positioned on top of the first deformable layer, the second deformable layer embedded with deformation markers.
    Type: Grant
    Filed: November 16, 2012
    Date of Patent: March 28, 2017
    Assignee: President and Fellows of Harvard College
    Inventors: Ramaswamy Krishnan, Allen Ehrlicher, James Butler, David A. Weitz, Jeffrey J. Fredberg, Chan Young Park
  • Patent number: 9519511
    Abstract: Techniques for application activation are described herein. An operating system (OS) can be configured to incorporate various extension points that are serviceable through contracts defining individual invocations of extensible functionality. The extensible functionality is integrated as part of the OS and controlled by the OS in a centralized manner. However, the specific implementations of the extensible functionally are offloaded to applications using the contracts. For example, the OS can include or otherwise make use of a centralized application activation component that employs an object-oriented approach to invoke applications to perform particular contracts. The application activation component can pass information describing a particular contract to activate a designated application and enable the application to service the contract in the manner specified by the OS.
    Type: Grant
    Filed: May 20, 2015
    Date of Patent: December 13, 2016
    Assignee: Microsoft Technology Licensing, LLC
    Inventors: Daniel J. Oliver, Benjamin A. Betz, Christopher J. Guzak, Relja Ivanovic, Ramaswamy Krishnan-Chittur, Brandon H. Paddock
  • Publication number: 20150286499
    Abstract: Techniques for application activation are described herein. An operating system (OS) can be configured to incorporate various extension points that are serviceable through contracts defining individual invocations of extensible functionality. The extensible functionality is integrated as part of the OS and controlled by the OS in a centralized manner. However, the specific implementations of the extensible functionally are offloaded to applications using the contracts. For example, the OS can include or otherwise make use of a centralized application activation component that employs an object-oriented approach to invoke applications to perform particular contracts. The application activation component can pass information describing a particular contract to activate a designated application and enable the application to service the contract in the manner specified by the OS.
    Type: Application
    Filed: May 20, 2015
    Publication date: October 8, 2015
    Inventors: Daniel J. Oliver, Benjamin A. Betz, Christopher J. Guzak, Relja Ivanovic, Ramaswamy Krishnan-Chittur, Brandon H. Paddock
  • Patent number: 9063776
    Abstract: Techniques for application activation are described herein. An operating system (OS) can be configured to incorporate various extension points that are serviceable through contracts defining individual invocations of extensible functionality. The extensible functionality is integrated as part of the OS and controlled by the OS in a centralized manner. However, the specific implementations of the extensible functionally are offloaded to applications using the contracts. For example, the OS can include or otherwise make use of a centralized application activation component that employs an object-oriented approach to invoke applications to perform particular contracts. The application activation component can pass information describing a particular contract to activate a designated application and enable the application to service the contract in the manner specified by the OS.
    Type: Grant
    Filed: May 27, 2011
    Date of Patent: June 23, 2015
    Assignee: Microsoft Technology Licensing, LLC
    Inventors: Daniel J. Oliver, Benjamin A. Betz, Christopher J. Guzak, Relja Ivanovic, Ramaswamy Krishnan-Chittur, Brandon H. Paddock
  • Patent number: 8993312
    Abstract: Embodiments provide techniques for measuring and characterizing the dynamics of cell traction forces. Tunable elastic gel substrates can be disposed in multi-well plates. The gels can be of a uniform predetermined thickness. A multi-well plate can be loaded with gels of different shear moduli. An array of punch indenters can be attached to a loading platen such that the each indenter is aligned to a gel substrate. The indenters can apply tensile or compressive strains to the gel substrates. The magnitude, duration, and frequency of the strain can be controlled by a motor assembly coupled to a control system. The apparatus can be disposed in an incubator for long term cell culture experiments. The cell culture can be observed while a strain is applied. A ring-shaped indenter can be mounted on a microscope, coaxial to the objective lens, and lowered by a calibrated amount onto the underlying gel.
    Type: Grant
    Filed: August 28, 2008
    Date of Patent: March 31, 2015
    Assignee: President and Fellows of Harvard College
    Inventors: Ramaswamy Krishnan, Chan Young Park, Jeffrey Fredberg, Fei Liu, Justin Mih, Daniel Tschumperlin
  • Publication number: 20140336072
    Abstract: A platform for biological assays includes a base substrate providing structural support to the platform, at least one surface of the base substrate coated with position markers, a first deformable layer positioned on top of the base substrate, and a second deformable layer positioned on top of the first deformable layer, the second deformable layer embedded with deformation markers.
    Type: Application
    Filed: November 16, 2012
    Publication date: November 13, 2014
    Inventors: Ramaswamy Krishnan, Allen Ehrlicher, James Butler, David A. Weitz, Jeffrey J. Fredberg, Chan Young Park
  • Publication number: 20120304200
    Abstract: Techniques for application activation are described herein. An operating system (OS) can be configured to incorporate various extension points that are serviceable through contracts defining individual invocations of extensible functionality. The extensible functionality is integrated as part of the OS and controlled by the OS in a centralized manner. However, the specific implementations of the extensible functionally are offloaded to applications using the contracts. For example, the OS can include or otherwise make use of a centralized application activation component that employs an object-oriented approach to invoke applications to perform particular contracts. The application activation component can pass information describing a particular contract to activate a designated application and enable the application to service the contract in the manner specified by the OS.
    Type: Application
    Filed: May 27, 2011
    Publication date: November 29, 2012
    Inventors: Daniel J. Oliver, Benjamin A. Betz, Christopher J. Guzak, Relja Ivanovic, Ramaswamy Krishnan-Chittur, Brandon H. Paddock
  • Publication number: 20110091922
    Abstract: Embodiments provide techniques for measuring and characterizing the dynamics of cell traction forces. Tunable elastic gel substrates can be disposed in multi-well plates. The gels can be of a uniform predetermined thickness. A multi-well plate can be loaded with gels of different shear moduli. An array of punch indenters can be attached to a loading platen such that the each indenter is aligned to a gel substrate. The indenters can apply tensile or compressive strains to the gel substrates. The magnitude, duration, and frequency of the strain can be controlled by a motor assembly coupled to a control system. The apparatus can be disposed in an incubator for long term cell culture experiments. The cell culture can be observed while a strain is applied. A ring-shaped indenter can be mounted on a microscope, coaxial to the objective lens, and lowered by a calibrated amount onto the underlying gel.
    Type: Application
    Filed: August 28, 2008
    Publication date: April 21, 2011
    Inventors: Ramaswamy Krishnan, Chan Young Park, Jeffrey Fredberg, Fei Liu, Justin Mih, Daniel Tschumperlin