Patents by Inventor Sean Ekins

Sean Ekins has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240009183
    Abstract: Methods of treating or preventing diseases caused by viral infections via the administration of pyronaridine, quinacrine, and/or tilorone are described. The viral infections can be caused by viruses such as Marburg virus (MARV), Chikungunya virus (CHIKV), norovirus, Middle East Respiratory Syndrome coronavirus (MERS-CoV), and Nipah virus.
    Type: Application
    Filed: July 10, 2023
    Publication date: January 11, 2024
    Applicant: Collaborations Pharmaceuticals, Inc.
    Inventors: Sean Ekins, Thomas R. Lane, Ana C. Puhl
  • Publication number: 20230330045
    Abstract: The identification of new acetylcholinesterase (AChE) inhibitors is described. For example, tilorone was newly identified as an AChE inhibitor by use of a machine learning model followed by in vitro screening. The new AChE inhibitors can selectively inhibit AChE compared to butyrylcholinesterase (BuChE). Methods of inhibiting AChE and of treating or preventing diseases, disorders, and conditions treatable or preventable by AChE inhibition are also described. For example, methods of treating and/or preventing certain dermatological conditions and organophosphorous or nerve agent poisoning are described.
    Type: Application
    Filed: September 16, 2021
    Publication date: October 19, 2023
    Inventors: Patricia A. Vignaux, Ana C. Puhl Rubio, Sean Ekins
  • Patent number: 11696914
    Abstract: Methods of treating or preventing diseases caused by viral infections via the administration of pyronaridine, quinacrine, and/or tilorone are described. The viral infections can be caused by viruses such as Marburg virus (MARV), Chikungunya virus (CHIKV), norovirus, Middle East Respiratory Syndrome coronavirus (MERS-CoV), and Nipah virus.
    Type: Grant
    Filed: November 6, 2020
    Date of Patent: July 11, 2023
    Assignee: Collaborations Pharmaceuticals, Inc.
    Inventors: Sean Ekins, Thomas R. Lane, Ana C. Puhl Rubio
  • Publication number: 20220298149
    Abstract: Isoxazole-3-carboxamide derivatives and their use in treating viral infections and diseases, such as diseases caused by viruses of the Picornaviridae family of viruses (e.g., rhinoviruses, enteroviruses, and coxsackieviruses) is described. The derivatives have good efficacy against a range of viruses, including pleconaril-resistant viral strains, and have low induction of cytochrome P4503A4 (CYP3A4).
    Type: Application
    Filed: September 25, 2020
    Publication date: September 22, 2022
    Inventors: Vadim Makarov, Michaela Schmidtke, Sean Ekins
  • Patent number: 11382875
    Abstract: Methods of modulating the interaction between ?-amyloid and ?7-nAChR are provided. Aspects of the methods include administering to the subject an effective amount of a naphthalene derivative active agent. Compositions and kits for practicing the subject methods are also provided. The methods, compositions and kits find use in treating a variety of applications, such as treating a subject for a neurodegenerative disease, e.g., Alzheimer's disease.
    Type: Grant
    Filed: April 5, 2018
    Date of Patent: July 12, 2022
    Assignees: Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Collaborations Pharmaceuticals, Inc.
    Inventors: Aaron McMurtray, Julia Chung, Natalie Diaz, Sean Ekins
  • Publication number: 20220144781
    Abstract: The invention provides compounds of formula I: and salts thereof wherein R1-R5 have any of the meanings described in the specification. The compounds are useful for treating bacterial infections (e.g. tuberculosis).
    Type: Application
    Filed: November 2, 2021
    Publication date: May 12, 2022
    Applicant: RUTGERS, THE STATE UNIVERSITY OF NEW JERSEY
    Inventors: Joel S. FREUNDLICH, David ALLAND, Matthew B. NEIDITCH, Pradeep KUMAR, Glenn CAPODAGLI, Divya AWASTHI, Sean EKINS
  • Patent number: 11186549
    Abstract: The invention provides compounds of formula (I): and salts thereof wherein R1-R5 have any of the meanings described in the specification. The compounds are useful for treating bacterial infections (e.g. tuberculosis).
    Type: Grant
    Filed: August 29, 2018
    Date of Patent: November 30, 2021
    Assignee: RUTGERS, THE STATE UNIVERSITY OF NEW JERSEY
    Inventors: Joel S. Freundlich, David Alland, Matthew B. Neiditch, Pradeep Kumar, Glenn Capodagli, Divya Awasthi, Sean Ekins
  • Publication number: 20210015906
    Abstract: The present disclosure relates to compositions and methods for treating Sanfilippo syndrome (also known as Sanfilippo disease type D, Sanfilippo D, mucopolysaccharidosis type IIID, MPS IIID). The method can entail injecting to the spinal fluid of a MPS IIID patient an effective amount of a composition comprising a recombinant human acetylglucosamine-6-sulfatase (GNS) protein comprising the amino acid sequence of SEQ ID NO: 1 or an amino acid sequence having at least 90% sequence identity to SEQ ID NO: 1 and having the enzymatic activity of the human GNS protein. The composition can be provided in an artificial cerebrospinal fluid. About 1 mg to about 100 mg of the recombinant polypeptide may be administered to the patient once every 2 weeks to 6 months.
    Type: Application
    Filed: July 1, 2020
    Publication date: January 21, 2021
    Inventors: Patricia Dickson, Tsui-Fen Chou, Sean Ekins, Shih-Hsin Kan, Steven Le, Derek R. Moen
  • Patent number: 10695322
    Abstract: New antimicrobials targeting L,D-transpeptidases, non-classical cysteine peptidases, have been developed and their unique chemical structures identified. Carbapenems and penems of the present invention are unique among ?-lactams as they acylate and inhibit L,D-transpeptidases, which likely results in their superior antimicrobial potency. These new antimicrobial agents can be used alone, or in combination with other classic antimicrobial agents that target D,D transpeptidases, when treating bacterial infections.
    Type: Grant
    Filed: January 26, 2017
    Date of Patent: June 30, 2020
    Assignees: The Johns Hopkins University, Rutgers, The State University of New Jersey
    Inventors: Gyanu Lamichhane, Craig A. Townsend, Evan Lloyd, Amit Kaushik, Pankaj Kumar, Joel Freundlich, Shaogang Li, Sean Ekins, Nicole Parrish
  • Publication number: 20200199076
    Abstract: The invention provides compounds of formula (I): and salts thereof wherein R1-R5 have any of the meanings described in the specification. The compounds are useful for treating bacterial infections (e.g. tuberculosis).
    Type: Application
    Filed: August 29, 2018
    Publication date: June 25, 2020
    Applicant: RUTGERS, THE STATE UNIVERSITY OF NEW JERSEY
    Inventors: Joel S. FREUNDLICH, David ALLAND, Matthew B. NEIDITCH, Pradeep KUMAR, Glenn CAPODAGLI, Divya AWASTHI, Sean EKINS
  • Publication number: 20190167637
    Abstract: New antimicrobials targeting L,D-transpeptidases, non-classical cysteine peptidases, have been developed and their unique chemical structures identified. Carbapenems and penems of the present invention are unique among ?-lactams as they acylate and inhibit L,D-transpeptidases, which likely results in their superior antimicrobial potency. These new antimicrobial agents can be used alone, or in combination with other classic antimicrobial agents that target D,D transpeptidases, when treating bacterial infections.
    Type: Application
    Filed: January 26, 2017
    Publication date: June 6, 2019
    Inventors: Gyanu Lamichhane, Craig A. Townsend, Evan Lloyd, Amit Kaushik, Pankaj Kumar, Joel Freundlich, Shaogang Li, Sean Ekins, Nicole Parrish
  • Publication number: 20180221459
    Abstract: The present disclosure relates to compositions and methods for treating Sanfilippo syndrome (also known as Sanfilippo disease type D, Sanfilippo D, mucopolysaccharidosis type IIID, MPS IIID). The method can entail injecting to the spinal fluid of a MPS IIID patient an effective amount of a composition comprising a recombinant human acetylglucosamine-6-sulfatase (GNS) protein comprising the amino acid sequence of SEQ ID NO: 1 or an amino acid sequence having at least 90% sequence identity to SEQ ID NO: 1 and having the enzymatic activity of the human GNS protein. The composition can be provided in an artificial cerebrospinal fluid. About 1 mg to about 100 mg of the recombinant polypeptide may be administered to the patient once every 2 weeks to 6 months.
    Type: Application
    Filed: April 5, 2018
    Publication date: August 9, 2018
    Inventors: Patricia Dickson, Tsui-Fen Chou, Sean Ekins, Shih-Hsin Kan, Steven Le, Derek R. Moen
  • Patent number: 8211882
    Abstract: The present invention discloses methods of modulating the activity of Group I mGluRs using a defined class of benzamide compounds. In one embodiment, methods of modulating the activity of mGluR1 are provided. In another embodiment, methods of modulating the activity of mGluR5 are provided. In still another embodiment, methods of simultaneously modulating the activities of both mGluR1 and mGluR5 are provided. The present invention also provides methods of treating diseases or disorders which are mediated in full or in part by Group I mGluRs using one or more compounds belonging to the defined class of benzamide compounds. The present invention further provides methods of preventing diseases or disorders which are mediated in full or in part by Group I mGluRs using one or more compounds belonging to the defined class of compounds.
    Type: Grant
    Filed: March 6, 2009
    Date of Patent: July 3, 2012
    Inventors: Richard Delarey Wood, William J Welsh, Sean Ekins, Ni Ai
  • Publication number: 20120029896
    Abstract: A system is provided for the prediction of human drug metabolism and toxicity of novel compounds. The system enables the visualization of pre-clinical and clinical high-throughput data in the context of a complete biological organism. Substructure and similarity structure searches can be performed using the underlying databases of xenobiotics, active ligands, and endobiotics. The system also has an analytical component for the parsing, integration, and network analysis of genomics, proteomics, and metabolomics high-throughput data. From this information, the system further generates networks around proteins, genes and compounds to assess toxicity and drug-drug interactions.
    Type: Application
    Filed: March 28, 2011
    Publication date: February 2, 2012
    Applicant: GeneGo, Inc.
    Inventors: Sean Ekins, Andrej Bugrim, Tatiana Nikolskaya, Yuri Nikolsky
  • Publication number: 20100250218
    Abstract: A system is provided for the prediction of human drug metabolism and toxicity of novel compounds. The system enables the visualization of pre-clinical and clinical high-throughput data in the context of a complete biological organism. Substructure and similarity structure searches can be performed using the underlying databases of xenobiotics, active ligands, and endobiotics. The system also has an analytical component for the parsing, integration, and network analysis of genomics, proteomics, and metabolomics high-throughput data. From this information, the system further generates networks around proteins, genes and compounds to assess toxicity and drug-drug interactions.
    Type: Application
    Filed: March 29, 2010
    Publication date: September 30, 2010
    Inventors: Sean EKINS, Andrej Bugrim, Tatiana Nikolskaya, Yuri Nikolsky
  • Publication number: 20090239919
    Abstract: The present invention discloses methods of modulating the activity of Group I mGluRs using a defined class of benzamide compounds. In one embodiment, methods of modulating the activity of mGluR1 are provided. In another embodiment, methods of modulating the activity of mGluR5 are provided. In still another embodiment, methods of simultaneously modulating the activities of both mGluR1 and mGluR5 are provided. The present invention also provides methods of treating diseases or disorders which are mediated in full or in part by Group I mGluRs using one or more compounds belonging to the defined class of benzamide compounds. The present invention further provides methods of preventing diseases or disorders which are mediated in full or in part by Group I mGluRs using one or more compounds belonging to the defined class of compounds.
    Type: Application
    Filed: March 6, 2009
    Publication date: September 24, 2009
    Inventors: Richard Delarey Wood, William J. Welsh, Sean Ekins, Ni Ai
  • Publication number: 20070219768
    Abstract: A system is provided for the prediction of human drug metabolism and toxicity of novel compounds. The system enables the visualization of pre-clinical and clinical high-throughput data in the context of a complete biological organism. Substructure and similarity structure searches can be performed using the underlying databases of xenobiotics, active ligands, and endobiotics. The system also has an analytical component for the parsing, integration, and network analysis of genomics, proteomics, and metabolomics high-throughput data. From this information, the system further generates networks around proteins, genes and compounds to assess toxicity and drug-drug interactions.
    Type: Application
    Filed: March 17, 2006
    Publication date: September 20, 2007
    Inventors: Sean Ekins, Andrej Bugrim, Tatiana Nikolskaya, Yuri Nikolsky
  • Patent number: 6564152
    Abstract: The present invention relates to novel screening methods which enable the selection of neurokinin-1 (NK-1) receptor antagonist compounds which do not possess significant inhibitory potency towards cytochrome P450 enzymes, in particular, CYP2D6. The present invention also relates to a method of generating a pharmacophore model for the CYP2D6 inhibitory activity of NK-1 receptor antagonist compounds; to methods for the discovery of molecules that are potential NK-1 receptor antagonist compounds which do not possess significant inhibitory potency towards the CYP2D6 enzyme; to methods of modeling the features of the CYP2D6 pharmacophore useful in selecting NK-1 receptor antagonist molecules which do not possess significant potency towards CYP2D6.
    Type: Grant
    Filed: January 17, 2001
    Date of Patent: May 13, 2003
    Assignee: Pfizer Inc
    Inventors: Sean Ekins, Bill J. Smith
  • Publication number: 20030069699
    Abstract: A method and device for the automated large scale preparation for testing of drug-drug interactions, particularly with determination of IC50 and Ki, as a screening tool enhancement for determining viability of large numbers of compounds as drug candidates. Small samples of specific probe substrates and new compound inhibitors are automatically dispensed en masse into multi-welled reaction plates which are prefilled with thawed human microsomes, buffer and cofactor. The reaction plates are incubated and the reaction products are tested within degradation time limits, for initial biological determinations of relevant interaction effects of the compounds.
    Type: Application
    Filed: October 29, 2002
    Publication date: April 10, 2003
    Inventors: Sean Ekins, Diane Lynn Johnson, Kevin George Kelly
  • Patent number: 6489094
    Abstract: A method and device for the automated large scale preparation for testing of drug-drug interactions, particularly with determination of IC50 and Ki, as a screening tool enhancement for determining viability of large numbers of compounds as drug candidates. Small samples of specific probe substrates and new compound inhibitors are automatically dispensed en masse into multi-welled reaction plates which are prefilled with thawed human microsomes, buffer and cofactor. The reaction plates are incubated and the reaction products are tested within degradation time limits, for initial biological determinations of relevant interaction effects of the compounds.
    Type: Grant
    Filed: May 16, 2001
    Date of Patent: December 3, 2002
    Assignee: Pfizer Inc.
    Inventors: Sean Ekins, Diane Lynn Johnson, Kevin George Kelly