Patents by Inventor Shannon K. Kaplan

Shannon K. Kaplan has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 8637249
    Abstract: The disclosed invention is related to compositions, kits and methods comprising one or more oligomers targeting 16S rRNA target nucleic acid from Campylobacter species jejuni, coli and/or lari. Compositions include amplification oligomers, detection probe oligomers and/or target capture oligomers. Kits and methods comprise at least one of these oligomers.
    Type: Grant
    Filed: November 16, 2009
    Date of Patent: January 28, 2014
    Assignee: Gen-Probe Incorporated
    Inventors: Michael R. Reshatoff, Jr., Jennifer J. Bungo, Shannon K. Kaplan, James J. Hogan
  • Patent number: 8609829
    Abstract: Compositions are disclosed as nucleic acid sequences that may be used as amplification oligomers, including primers, capture probes for sample preparation, and detection probes specific for Legionella pneumophila 16S or 23S rRNA sequences or DNA encoding 16S or 23S rRNA. Methods are disclosed for detecting the presence of L. pneumophila in samples by using the disclosed compositions in methods that include in vitro nucleic acid amplification of a 16S rRNA sequence or DNA encoding the 16S rRNA sequence, or of a 23S rRNA sequence or DNA encoding the 23S rRNA sequence to produce a detectable amplification product.
    Type: Grant
    Filed: November 23, 2009
    Date of Patent: December 17, 2013
    Assignee: Gen-Probe Incorporated
    Inventors: Jennifer J. Bungo, James J. Hogan, Reinhold B. Pollner, Marie K. Hudspeth, Shannon K. Kaplan, Elizabeth M. Goslow
  • Publication number: 20130224745
    Abstract: Methods for amplifying and detecting Propionibacterium acnes nucleic acid by targeting specific sequences in 16S rRNA, 23S rRNA, or DNA encoding 16S rRNA or 23S rRNA are disclosed. Nucleic acid oligonucleotide sequence compositions specific for P. acnes nucleic acid sequences in 16S or 23S rRNA or DNA encoding 16S or 23S rRNA sequences are disclosed, which are useful for amplification oligonucletides, capture probes in sample preparation, and probes for detection of P. acnes nucleic acid sequences.
    Type: Application
    Filed: April 19, 2013
    Publication date: August 29, 2013
    Applicant: GEN-PROBE INCORPORATED
    Inventors: James J. HOGAN, Kristin W. LIVEZEY, Shannon K. KAPLAN, Jennifer J. BUNGO
  • Publication number: 20120052496
    Abstract: The disclosed invention is related to compositions, kits and methods comprising one or more oligomers targeting 16S rRNA target nucleic acid from Campylobacter species jejuni, coli and/or lari. Compositions include amplification oligomers, detection probe oligomers and/or target capture oligomers. Kits and methods comprise at least one of these oligomers.
    Type: Application
    Filed: November 16, 2009
    Publication date: March 1, 2012
    Applicant: GEN-PROBE INCORPORATED
    Inventors: Michael R. Reshatoff, JR., Jennifer J. Bungo, Shannon K. Kaplan, James J. Hogan
  • Publication number: 20100323362
    Abstract: Compositions, reaction mixtures, kits and methods used in amplifying and detecting nucleic acids from various species of the class Mollicutes. Particular regions of the 23S rRNA or its gene have been identified as preferred targets for nucleic acid amplification reactions of a sample suspected containing at least one species of Mollicutes. Some oligomers comprise tag regions, target closing regions, promoter sequences, and/or binding moieties. Samples can be from any source suspected of containing a species of the class Mollicutes. Preferred sample sources include bioreactors, cell lines, cell culture wares and pharmaceutical manufacturing wares.
    Type: Application
    Filed: June 23, 2010
    Publication date: December 23, 2010
    Applicant: GEN-PROBE INCORPORATED
    Inventors: Shannon K. KAPLAN, Kristin W. LIVEZEY, Michael M. BECKER, James J. HOGAN
  • Publication number: 20100286383
    Abstract: Compositions are disclosed as nucleic acid sequences that may be used as amplification oligomers, including primers, capture probes for sample preparation, and detection probes specific for Candida albicans 26S rRNA sequences or DNA encoding 26S rRNA. Methods are disclosed for detecting the presence of C. albicans in samples by using the disclosed compositions in methods that include in vitro nucleic acid amplification of a 26S rRNA sequence or DNA encoding the 26S rRNA sequence to produce a detectable amplification product.
    Type: Application
    Filed: July 26, 2010
    Publication date: November 11, 2010
    Applicant: GEN-PROBE INCORPORATED
    Inventors: James J. HOGAN, Irene Andruszkiewicz, Jennifer J. Bungo, Shannon K. Kaplan
  • Patent number: 7786289
    Abstract: The invention provides a rapid sample-processing method for preparing hybridization reaction mixtures substantially depleted of RNA, and a method of identifying the methicillin-resistance status and vancomycin-resistance status of an organism.
    Type: Grant
    Filed: May 11, 2004
    Date of Patent: August 31, 2010
    Assignee: Gen-Probe Incorporated
    Inventors: James J. Hogan, Shannon K. Kaplan
  • Publication number: 20100216155
    Abstract: The invention provides a rapid sample-processing method for preparing hybridization reaction mixtures substantially depleted of RNA, and a method of identifying the methicillin-resistance status and vancomycin-resistance status of an organism.
    Type: Application
    Filed: May 5, 2010
    Publication date: August 26, 2010
    Applicant: GEN-PROBE INCORPORATED
    Inventors: James J. HOGAN, Shannon K. KAPLAN
  • Publication number: 20100216141
    Abstract: Compositions are disclosed as nucleic acid sequences that may be used as amplification oligomers, including primers, capture probes for sample preparation, and detection probes specific for Legionella pneumophila 16S or 23S rRNA sequences or DNA encoding 16S or 23S rRNA. Methods are disclosed for detecting the presence of L. pneumophila in samples by using the disclosed compositions in methods that include in vitro nucleic acid amplification of a 16S rRNA sequence or DNA encoding the 16S rRNA sequence, or of a 23S rRNA sequence or DNA encoding the 23S rRNA sequence to produce a detectable amplification product.
    Type: Application
    Filed: November 23, 2009
    Publication date: August 26, 2010
    Applicant: GEN-PROBE INCORPORATED
    Inventors: Jennifer J. Bungo, James J. Hogan, Reinhold B. Pollner, Marie K. Hudspeth, Shannon K. Kaplan, Elizabeth M. Goslow
  • Publication number: 20100159530
    Abstract: Compositions are disclosed as nucleic acid sequences that may be used as amplification oligomers, including primers, capture probes for sample preparation, and detection probes specific for Candida albicans 26S rRNA sequences or DNA encoding 26S rRNA. Methods are disclosed for detecting the presence of C. albicans in samples by using the disclosed compositions in methods that include in vitro nucleic acid amplification of a 26S rRNA sequence or DNA encoding the 26S rRNA sequence to produce a detectable amplification product.
    Type: Application
    Filed: March 1, 2010
    Publication date: June 24, 2010
    Applicant: GEN-PROBE INCORPORATED
    Inventors: JAMES J. HOGAN, IRENE ANDRUSZKIEWICZ, JENNIFER J. BUNGO, SHANNON K. KAPLAN
  • Publication number: 20100124749
    Abstract: The disclosed invention is related to compositions, kits and methods comprising one or more oligomers targeting 16S rRNA target nucleic acid from Campylobacter species jejuni, coli and/or lari. Compositions include amplification oligomers, detection probe oligomers and/or target capture oligomers. Kits and methods comprise at least one of these oligomers.
    Type: Application
    Filed: November 16, 2009
    Publication date: May 20, 2010
    Applicant: GEN-PROBE INCORPORATED
    Inventors: Michael R. RESHATOFF, JR., Jennifer J. BUNGO, Shannon K. KAPLAN, James J. HOGAN
  • Patent number: 7670780
    Abstract: Compositions are disclosed as nucleic acid sequences that may be used as amplification oligomers, including primers, capture probes for sample preparation, and detection probes specific for Candida albicans 26S rRNA sequences or DNA encoding 26S rRNA. Methods are disclosed for detecting the presence of C. albicans in samples by using the disclosed compositions in methods that include in vitro nucleic acid amplification of a 26S rRNA sequence or DNA encoding the 26S rRNA sequence to produce a detectable amplification product.
    Type: Grant
    Filed: August 11, 2009
    Date of Patent: March 2, 2010
    Assignee: Gen-Probe Incorporated
    Inventors: James J. Hogan, Irene Andruszkiewicz, Jennifer J. Bungo, Shannon K. Kaplan
  • Publication number: 20090305293
    Abstract: Compositions are disclosed as nucleic acid sequences that may be used as amplification oligomers, including primers, capture probes for sample preparation, and detection probes specific for Candida albicans 26S rRNA sequences or DNA encoding 26S rRNA. Methods are disclosed for detecting the presence of C. albicans in samples by using the disclosed compositions in methods that include in vitro nucleic acid amplification of a 26S rRNA sequence or DNA encoding the 26S rRNA sequence to produce a detectable amplification product.
    Type: Application
    Filed: August 11, 2009
    Publication date: December 10, 2009
    Applicant: GEN-PROBE INCORPORATED
    Inventors: James J. Hogan, Irene Andruszkiewicz, Jennifer J. Bungo, Shannon K. Kaplan
  • Publication number: 20090291431
    Abstract: Compositions are disclosed as nucleic acid sequences that may be used as amplification oligomers, including primers, capture probes for sample preparation, and detection probes specific for Legionella pneumophila 16S or 23S rRNA sequences or DNA encoding 16S or 23S rRNA. Methods are disclosed for detecting the presence of L. pnuemophila in samples by using the disclosed compositions in methods that include in vitro nucleic acid amplification of a 16S rRNA sequence or DNA encoding the 16S rRNA sequence, or of a 23S rRNA sequence or DNA encoding the 23S rRNA sequence to produce a detectable amplification product.
    Type: Application
    Filed: October 17, 2006
    Publication date: November 26, 2009
    Applicant: GEN-PROBE INCORPORATED
    Inventors: Jennifer J. Bungo, James J. Hogan, Reinhold B. Pollner, Marie K. Hudspeth, Shannon K. Kaplan, Elizabeth M. Marlowe
  • Publication number: 20090269764
    Abstract: Methods for amplifying and detecting Propionibacterium acnes nucleic acid by targeting specific sequences in 16S rRNA, 23S rRNA, or DNA encoding 16S rRNA or 23S rRNA are disclosed. Nucleic acid oligonucleotide sequence compositions specific for P. acnes nucleic acid sequences in 16S or 23S rRNA or DNA encoding 16S or 23S rRNA sequences are disclosed, which are useful for amplification oligonucleotides, capture probes in sample preparation, and probes for detection of P. acnes nucleic acid sequences.
    Type: Application
    Filed: February 19, 2009
    Publication date: October 29, 2009
    Applicant: Gen-Probe Incorporated
    Inventors: James J. HOGAN, Kristin W. Livezey, Shannon K. Kaplan, Jennifer J. Bungo
  • Patent number: 7595164
    Abstract: Compositions are disclosed as nucleic acid sequences that may be used as amplification oligomers, including primers, capture probes for sample preparation, and detection probes specific for Candida albicans 26S rRNA sequences or DNA encoding 26S rRNA. Methods are disclosed for detecting the presence of C. albicans in samples by using the disclosed compositions in methods that include in vitro nucleic acid amplification of a 26S rRNA sequence or DNA encoding the 26S rRNA sequence to produce a detectable amplification product.
    Type: Grant
    Filed: December 15, 2008
    Date of Patent: September 29, 2009
    Assignee: Gen-Probe Incorporated
    Inventors: James J. Hogan, Irene Andruszkiewicz, Jennifer J. Bungo, Shannon K. Kaplan
  • Publication number: 20090170110
    Abstract: Compositions are disclosed as nucleic acid sequences that may be used as amplification oligomers, including primers, capture probes for sample preparation, and detection probes specific for Candida albicans 26S rRNA sequences or DNA encoding 26S rRNA. Methods are disclosed for detecting the presence of C. albicans in samples by using the disclosed compositions in methods that include in vitro nucleic acid amplification of a 26S rRNA sequence or DNA encoding the 26S rRNA sequence to produce a detectable amplification product.
    Type: Application
    Filed: December 15, 2008
    Publication date: July 2, 2009
    Applicant: Gen-Probe Incorporated
    Inventors: James J. HOGAN, Irene Andruszkiewicz, Jennifer J. Bungo, Shannon K. Kaplan
  • Publication number: 20080268452
    Abstract: The present invention provides compositions, methods and kits for the species-specific detection of pseudomonas aeruginosa.
    Type: Application
    Filed: April 2, 2008
    Publication date: October 30, 2008
    Applicant: GEN-PROBE INCORPORATED
    Inventors: Shannon K. Kaplan, Kristin Livezey, Jennifer J. Bungo, James J. Hogan
  • Publication number: 20040229268
    Abstract: The invention provides a rapid sample-processing method for preparing hybridization reaction mixtures substantially depleted of RNA, and a method of identifying the methicillin-resistance status and vancomycin-resistance status of an organism.
    Type: Application
    Filed: May 11, 2004
    Publication date: November 18, 2004
    Inventors: James J. Hogan, Shannon K. Kaplan