Patents by Inventor Shoujun Xu

Shoujun Xu has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20230160003
    Abstract: Embodiments of the present disclosure pertain to methods of utilizing force-modulated hybridization to determine the length of an analyte strand, to determine an unknown nucleic acid sequence, or to determine the binding of a nucleotide to an active agent. Additional embodiments of the present disclosure pertain to sample holder devices and methods of utilizing such devices. Further embodiments of the present disclosure pertain to detection devices.
    Type: Application
    Filed: June 11, 2018
    Publication date: May 25, 2023
    Applicant: University of Houston System
    Inventors: Shoujun Xu, Qiongzheng Hu, Yuhong Wang
  • Publication number: 20210041395
    Abstract: A method of measuring dissociation of the biomolecular bonds in one or multiple sample wells using super-resolution force spectroscopy (SURFS). SURFS utilizes precise ultrasound radiation to exert an acoustic radiation force on the biomolecular bonds labeled with magnetic particles. The force-induced dissociation of the protein bonds labeled with magnetic particles may be measured as a reduced magnetic signal by a magnetic sensor. The force resolution allows for differentiating biomolecular bonds with an extremely high level of precision. The biomolecular bonds include protein-protein, protein-nucleic acid, nucleic acid-nucleic acid, small molecule-protein, and small molecule-nucleic acid interactions.
    Type: Application
    Filed: February 8, 2018
    Publication date: February 11, 2021
    Applicant: University of Houston System
    Inventors: Shoujun Xu, Yuhong Wang, Haina Jia, Heng Yin, Yujia Mao
  • Patent number: 10640813
    Abstract: A method of using an exchange-induced remnant magnetization (EXIRM) technique for label free detection of short strands of nucleotides and cancer biomarkers, such as DNA and microRNA strands, DNA/RNA-binding biomarkers, and cancer-specific antigens, with high sensitivity, high specificity, and broad dynamic range. The method may provide a label-free approach aimed to facilitate high reliability, and to require a minimum amount of biochemical reagents.
    Type: Grant
    Filed: October 25, 2018
    Date of Patent: May 5, 2020
    Assignee: University of Houston System
    Inventors: Shoujun Xu, Li Yao, Yuhong Wang, Qiongzheng Hu, Haopeng Yang
  • Publication number: 20190048403
    Abstract: A method of using an exchange-induced remnant magnetization (EXIRM) technique for label free detection of short strands of nucleotides and cancer biomarkers, such as DNA and microRNA strands, DNA/RNA-binding biomarkers, and cancer-specific antigens, with high sensitivity, high specificity, and broad dynamic range. The method may provide a label-free approach aimed to facilitate high reliability, and to require a minimum amount of biochemical reagents.
    Type: Application
    Filed: October 25, 2018
    Publication date: February 14, 2019
    Applicant: University of Houston System
    Inventors: Shoujun XU, Li YAO, Yuhong WANG, Qiongzheng HU, Haopeng YANG
  • Patent number: 10112169
    Abstract: A system and method for resolving and/or mechanically manipulating molecular bonds. A method for resolving molecular bonds includes applying ultrasound to molecules to be manipulated. A magnetic signal associated with the molecules is measured. Whether ultrasound causes dissolution of the bonds of the molecules is determined based on measurements of the magnetic signal.
    Type: Grant
    Filed: October 27, 2014
    Date of Patent: October 30, 2018
    Assignee: UNIVERSITY OF HOUSTON SYSTEM
    Inventors: Shoujun Xu, Lashan De Silva, Li Yao
  • Patent number: 9778249
    Abstract: Methods of quantifying the efficiency of a drug molecule for its targeted receptor, using a differential binding force to quantify the efficiency of a drug molecule to its targeted receptor.
    Type: Grant
    Filed: September 25, 2015
    Date of Patent: October 3, 2017
    Assignee: UNIVERSITY OF HOUSTON SYSTEM
    Inventors: Shoujun Xu, Qiongzheng Hu, Yuhong Wang, Te-Wei Tsai
  • Publication number: 20170234860
    Abstract: Methods of quantifying the efficiency of a drug molecule for its targeted receptor, using a differential binding force to quantify the efficiency of a drug molecule to its targeted receptor.
    Type: Application
    Filed: September 25, 2015
    Publication date: August 17, 2017
    Inventors: Shoujun XU, Qiongzheng HU, Yuhong WANG, Te-Wei TSAI
  • Publication number: 20150117156
    Abstract: A system and method for resolving and/or mechanically manipulating molecular bonds. A method for resolving molecular bonds includes applying ultrasound to molecules to be manipulated. A magnetic signal associated with the molecules is measured. Whether ultrasound causes dissolution of the bonds of the molecules is determined based on measurements of the magnetic signal.
    Type: Application
    Filed: October 27, 2014
    Publication date: April 30, 2015
    Inventors: Shoujun Xu, Lashan De Silva, Li Yao
  • Publication number: 20140309134
    Abstract: A method of using an exchange-induced remnant magnetization (EXIRM) technique for label free detection of short strands of nucleotides and cancer biomarkers, such as DNA and microRNA strands, DNA/RNA-binding biomarkers, and cancer-specific antigens, with high sensitivity, high specificity, and broad dynamic range. The method may provide a label-free approach aimed to facilitate high reliability, and to require a minimum amount of biochemical reagents.
    Type: Application
    Filed: April 8, 2014
    Publication date: October 16, 2014
    Applicant: University of Houston System
    Inventors: Shoujun XU, Li YAO, Yuhong WANG, Qiongzheng HU, Haopeng YANG
  • Patent number: 8802057
    Abstract: A method of detecting target molecules comprising; conjugating a first magnetic particle to a first ligand to form a first magnetic particle ligand conjugate; adding the conjugate to a sample containing target molecules to form a mixture comprising, the free conjugate and conjugate-target molecule binding pairs; measuring a first magnetization of the mixture; subjecting the mixture to a first force; measuring a second magnetization value of the mixture; subtracting the second magnetization value from the first magnetization value to calculate a first force-induced magnetization contrast; subjecting the mixture to a second force; measuring a third magnetization of the mixture; and subtracting the third magnetization value from the second magnetization value to calculate a second force-induced magnetization contrast.
    Type: Grant
    Filed: July 21, 2011
    Date of Patent: August 12, 2014
    Assignee: University of Houston System
    Inventors: Shoujun Xu, Li Yao
  • Patent number: 8570035
    Abstract: A novel approach to magnetic resonance imaging is disclosed. Blood flowing through a living system is prepolarized, and then encoded. The polarization can be achieved using permanent or superconducting magnets. The polarization may be carried out upstream of the region to be encoded or at the place of encoding. In the case of an MRI of a brain, polarization of flowing blood can be effected by placing a magnet over a section of the body such as the heart upstream of the head. Alternatively, polarization and encoding can be effected at the same location. Detection occurs at a remote location, using a separate detection device such as an optical atomic magnetometer, or an inductive Faraday coil. The detector may be placed on the surface of the skin next to a blood vessel such as a jugular vein carrying blood away from the encoded region.
    Type: Grant
    Filed: December 12, 2008
    Date of Patent: October 29, 2013
    Assignee: The Regents of the University of California
    Inventors: David Wemmer, Alexander Pines, Louis Bouchard, Shoujun Xu, Elad Harel, Dmitry Budker, Thomas Lowery, Micah Ledbetter
  • Patent number: 8570027
    Abstract: A method of magnetic imaging at long detection ranges. In one embodiment the method comprises introducing a magnetic sample having magnetic particles into a detection field; detecting weak magnetic field signals of the magnetic particles; forming an image from the detected signals; and determining the location and quantity amount of the magnetic particles. The method further comprises introducing a magnetic sample to a human or other organism's body.
    Type: Grant
    Filed: June 1, 2010
    Date of Patent: October 29, 2013
    Assignee: University of Houston System
    Inventors: Shoujun Xu, Li Yao
  • Patent number: 8547095
    Abstract: A method and apparatus are described wherein a micro sample of a fluidic material may be assayed without sample contamination using NMR techniques, in combination with magnetoresistive sensors. The fluidic material to be assayed is first subject to pre-polarization, in one embodiment, by passage through a magnetic field. The magnetization of the fluidic material is then subject to an encoding process, in one embodiment an rf-induced inversion by passage through an adiabatic fast-passage module. Thereafter, the changes in magnetization are detected by a pair of solid-state magnetoresistive sensors arranged in gradiometer mode. Miniaturization is afforded by the close spacing of the various modules.
    Type: Grant
    Filed: April 2, 2010
    Date of Patent: October 1, 2013
    Assignee: The Regents of the University of California
    Inventors: Dmitry Budker, Alexander Pines, Shoujun Xu, Christian Hilty, Micah P. Ledbetter, Louis S. Bouchard
  • Publication number: 20120020892
    Abstract: A method of detecting target molecules comprising; conjugating a first magnetic particle to a first ligand to form a first magnetic particle ligand conjugate; adding the conjugate to a sample containing target molecules to form a mixture comprising, the free conjugate and conjugate-target molecule binding pairs; measuring a first magnetization of the mixture; subjecting the mixture to a first force; measuring a second magnetization value of the mixture; subtracting the second magnetization value from the first magnetization value to calculate a first force-induced magnetization contrast; subjecting the mixture to a second force; measuring a third magnetization of the mixture; and subtracting the third magnetization value from the second magnetization value to calculate a second force-induced magnetization contrast.
    Type: Application
    Filed: July 21, 2011
    Publication date: January 26, 2012
    Applicant: UNIVERSITY OF HOUSTON SYSTEM
    Inventors: Shoujun XU, Li YAO
  • Patent number: 7994783
    Abstract: An integral microfluidic device includes an alkali vapor cell and microfluidic channel, which can be used to detect magnetism for nuclear magnetic resonance (NMR) and magnetic resonance imaging (MRI). Small magnetic fields in the vicinity of the vapor cell can be measured by optically polarizing and probing the spin precession in the small magnetic field. This can then be used to detect the magnetic field of in encoded analyte in the adjacent microfluidic channel. The magnetism in the microfluidic channel can be modulated by applying an appropriate series of radio or audio frequency pulses upstream from the microfluidic chip (the remote detection modality) to yield a sensitive means of detecting NMR and MRI.
    Type: Grant
    Filed: February 6, 2009
    Date of Patent: August 9, 2011
    Assignee: The Regents of the Univerisity of California
    Inventors: Micah P. Ledbetter, Igor M. Savukov, Dmitry Budker, Vishal K. Shah, Svenja Knappe, John Kitching, David J. Michalak, Shoujun Xu, Alexander Pines
  • Publication number: 20110001478
    Abstract: A novel approach to magnetic resonance imaging is disclosed. Blood flowing through a living system is prepolarized, and then encoded. The polarization can be achieved using permanent or superconducting magnets. The polarization may be carried out upstream of the region to be encoded or at the place of encoding. In the case of an MRI of a brain, polarization of flowing blood can be effected by placing a magnet over a section of the body such as the heart upstream of the head. Alternatively, polarization and encoding can be effected at the same location. Detection occurs at a remote location, using a separate detection device such as an optical atomic magnetometer, or an inductive Faraday coil. The detector may be placed on the surface of the skin next to a blood vessel such as a jugular vein carrying blood away from the encoded region.
    Type: Application
    Filed: December 12, 2008
    Publication date: January 6, 2011
    Applicant: The Regents of the University of California
    Inventors: David Wemmer, Alex Pines, Louis Bouchard, Shoujun Xu, Elad Harel, Dmitry Budker, Thomas Lowery, Micah Ledbetter
  • Publication number: 20100301849
    Abstract: A method of magnetic imaging at long detection ranges. In one embodiment the method comprises introducing a magnetic sample having magnetic particles into a detection field; detecting weak magnetic field signals of the magnetic particles; forming an image from the detected signals; and determining the location and quantity amount of the magnetic particles. The method further comprises introducing a magnetic sample to a human or other organism's body.
    Type: Application
    Filed: June 1, 2010
    Publication date: December 2, 2010
    Applicant: UNIVERSITY OF HOUSTON SYSTEM
    Inventors: Shoujun XU, Li YAO
  • Publication number: 20100264917
    Abstract: A method and apparatus are described wherein a micro sample of a fluidic material may be assayed without sample contamination using NMR techniques, in combination with magnetoresistive sensors. The fluidic material to be assayed is first subject to pre-polarization, in one embodiment, by passage through a magnetic field. The magnetization of the fluidic material is then subject to an encoding process, in one embodiment an rf-induced inversion by passage through an adiabatic fast-passage module. Thereafter, the changes in magnetization are detected by a pair of solid-state magnetoresistive sensors arranged in gradiometer mode. Miniaturization is afforded by the close spacing of the various modules.
    Type: Application
    Filed: April 2, 2010
    Publication date: October 21, 2010
    Applicant: The Regents of the University of California
    Inventors: Dmitry Budker, Alexander Pines, Shoujun Xu, Christian Hilty, Micah P. Ledbetter, Louis S. Bouchard
  • Publication number: 20090256561
    Abstract: An integral microfluidic device includes an alkali vapor cell and microfluidic channel, which can be used to detect magnetism for nuclear magnetic resonance (NMR) and magnetic resonance imaging (MRI). Small magnetic fields in the vicinity of the vapor cell can be measured by optically polarizing and probing the spin precession in the small magnetic field. This can then be used to detect the magnetic field of in encoded analyte in the adjacent microfluidic channel. The magnetism in the microfluidic channel can be modulated by applying an appropriate series of radio or audio frequency pulses upstream from the microfluidic chip (the remote detection modality) to yield a sensitive means of detecting NMR and MRI.
    Type: Application
    Filed: February 6, 2009
    Publication date: October 15, 2009
    Applicant: The Regents of the University of California
    Inventors: Micah P. Ledbetter, Igor M. Savukov, Dmitry Budker, Vishal K. Shah, Svenja Knappe, John Kitching, David J. Michalak, Shoujun Xu, Alexander Pines
  • Patent number: 7573264
    Abstract: A laser-based atomic magnetometer (LBAM) apparatus measures magnetic fields, comprising: a plurality of polarization detector cells to detect magnetic fields; a laser source optically coupled to the polarization detector cells; and a signal detector that measures the laser source after being coupled to the polarization detector cells, which may be alkali cells. A single polarization cell may be used for nuclear magnetic resonance (NMR) by prepolarizing the nuclear spins of an analyte, encoding spectroscopic and/or spatial information, and detecting NMR signals from the analyte with a laser-based atomic magnetometer to form NMR spectra and/or magnetic resonance images (MRI). There is no need of a magnetic field or cryogenics in the detection step, as it is detected through the LBAM.
    Type: Grant
    Filed: November 27, 2006
    Date of Patent: August 11, 2009
    Assignee: The Regents of the University of California
    Inventors: Shoujun Xu, Thomas L. Lowery, Dmitry Budker, Valeriy V. Yashchuk, David E. Wemmer, Alexander Pines