Patents by Inventor Takahide Yokoi

Takahide Yokoi has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240102088
    Abstract: The present invention is directed to provide new PCR measuring method and device. As one embodiment of the present invention, a DNA detection method for detecting DNA in a droplet being present in oil, the droplet containing the DNA and a fluorescent labeled probe, the fluorescent labeled probe being hybridized to the DNA, the method including: a first step of amplifying the DNA in the droplet by a nucleic acid amplification reaction; and a second step of measuring a melting temperature of the fluorescent labeled probe and the DNA in the droplet is provided.
    Type: Application
    Filed: December 5, 2023
    Publication date: March 28, 2024
    Inventors: Junko TANAKA, Takahide YOKOI, Masao KAMAHORI, Yoshinobu KOHARA
  • Patent number: 11884973
    Abstract: The present invention is directed to provide new PCR measuring method and device. As one embodiment of the present invention, a DNA detection method for detecting DNA in a droplet being present in oil, the droplet containing the DNA and a fluorescent labeled probe, the fluorescent labeled probe being hybridized to the DNA, the method including: a first step of amplifying the DNA in the droplet by a nucleic acid amplification reaction; and a second step of measuring a melting temperature of the fluorescent labeled probe and the DNA in the droplet is provided.
    Type: Grant
    Filed: November 16, 2017
    Date of Patent: January 30, 2024
    Assignee: Hitachi, Ltd.
    Inventors: Junko Tanaka, Takahide Yokoi, Masao Kamahori, Yoshinobu Kohara
  • Publication number: 20230349856
    Abstract: An electrophoresis device is used to separate a biological substance using a separation medium. A recovery hole configured to recover the separated target biological substance is formed in an electrophoresis device, the recovery hole is configured to be capable of accommodating a solvent that can suspend the target biological substance, a buffer tank configured to accommodate a buffer solution is provided below the recovery hole, and a membrane is disposed between the recovery hole and the buffer tank.
    Type: Application
    Filed: September 2, 2020
    Publication date: November 2, 2023
    Applicant: HITACHI HIGH-TECH CORPORATION
    Inventors: Mima Ogawa, Takahide Yokoi
  • Publication number: 20230012343
    Abstract: In order to provide a molecular weight marker for electrophoresis that can be simultaneously electrophoresed in a same lane as a sample and can accurately predict an electrophoresis position of the sample, the molecular weight marker for electrophoresis of the present disclosure is characterized by containing a polyelectrolyte that is negatively charged in an aqueous solution and does not serve as a template for a DNA polymerase reaction.
    Type: Application
    Filed: December 20, 2019
    Publication date: January 12, 2023
    Applicant: Hitachi High-Tech Corporation
    Inventors: Mima OGAWA, Takahide YOKOI
  • Patent number: 11493477
    Abstract: An electrophoresis method, system, and gel recover biological substances from the gel with high efficiency. The method uses an electrophoresis gel having an injection hole into which biological substances are injected and a recovery hole from which the biological substances are recovered. The electrophoresis method includes injecting the biological substances into the injection hole, and applying an electric field penetrating the injection and recovery holes. A vertical axis in a downward direction as a positive direction is set as an X-axis, an axis which is perpendicular to the X-axis is set as a Y-axis, and coordinates of a bottom of the recovery hole are set as (XC, YC). The X coordinate XC of the bottom of the recovery hole satisfies XC>X1 when the biological substance is electrophoresed to coordinates (X1, YC) in the recovery hole from a bottom of the injection hole in the applying the electric field.
    Type: Grant
    Filed: May 28, 2019
    Date of Patent: November 8, 2022
    Assignee: Hitachi High-Tech Corporation
    Inventors: Mima Ogawa, Takahide Yokoi, Chihiro Uematsu
  • Publication number: 20220308013
    Abstract: An electrophoresis data correction device or a post-color-call data correction device selects specific wavelength data from first data, performs filtering processing to cut some or all of components on a high frequency side, compares peak intensities of the specific wavelength data before and after the filtering processing for each cutoff frequency, calculates, as a first cutoff frequency, the minimum cutoff frequency at which a decrease in peak intensity of the specific wavelength data falls within a predetermined allowable range, and corrects the first data or post-color-call data of the first data by performing filtering processing with the first cutoff frequency.
    Type: Application
    Filed: February 10, 2022
    Publication date: September 29, 2022
    Inventors: Takeshi ISHIDA, Yoshio KAMURA, Yusuke GOTO, Takahide YOKOI
  • Patent number: 11448638
    Abstract: Provided are a first tank; a second tank; a thin film having a nanopore, which communicates the first tank to the second tank, and disposed between the first and second tanks; a first electrode provided in the first tank; and a second electrode provided in the second tank. A wall surface of the nanopore has an ion adsorption preventing structure to prevent desorption/adsorption of an ion contained in a solution filling the first tank and/or the second tank, and a voltage is applied between the first and second electrodes to measure an ion current flowing through the nanopore.
    Type: Grant
    Filed: January 10, 2017
    Date of Patent: September 20, 2022
    Assignee: HITACHI HIGH-TECH CORPORATION
    Inventors: Kazuma Matsui, Yusuke Goto, Rena Akahori, Takahide Yokoi, Michiru Fujioka
  • Publication number: 20220260523
    Abstract: A method for recovering a biological substance and a device for recovering a biological substance capable of improving a recovery rate of a target biological substance with a simple configuration are provided. The method for recovering a biological substance uses an electrophoresis device having a gel 13 and recovery holes 11 and 111. The method for recovering a biological substance includes a step of starting application of a voltage for moving a target biological substance toward the recovery hole, after that, a step of removing buffer solution in the recovery hole before the target biological substance reaches the recovery hole, after that, a step of injecting a solvent into the recovery hole, and, after that, a step of recovering the target biological substance that reaches the recovery hole.
    Type: Application
    Filed: April 7, 2020
    Publication date: August 18, 2022
    Applicant: HITACHI HIGH-TECH CORPORATION
    Inventors: Mima OGWA, Takahide YOKOI
  • Patent number: 11377685
    Abstract: A base sequence determination apparatus includes (1) a mobility correction unit that outputs a mobility correction signal obtained by mobility correction of a time-series signal of a wavelength spectrum corresponding to each base, (2) a deconvolution unit that executes processes for calculating a deconvoluted signal of the mobility correction signal respectively for a plurality of parameter candidates of point spread function, calculating variance of peak intervals for the calculated deconvoluted signal, specifying a parameter of the point spread function using the calculated variance, and outputting the deconvoluted signal corresponding to the point spread function having the specified parameter as an updated deconvoluted signal, (3) a peak extracting unit that extracts a peak waveform from the updated deconvoluted signal and outputs an updated peak-extracted signal, and (4) a sequence specifying unit that inputs the updated peak-extracted signal and determines a base sequence.
    Type: Grant
    Filed: January 28, 2016
    Date of Patent: July 5, 2022
    Assignee: HITACHI HIGH-TECH CORPORATION
    Inventors: Yohei Kawaguchi, Tomohiro Yasuda, George Chalkidis, Takahide Yokoi
  • Publication number: 20210247358
    Abstract: An electrophoresis method, system, and gel recover biological substances from the gel with high efficiency. The method uses an electrophoresis gel having an injection hole into which biological substances are injected and a recovery hole from which the biological substances are recovered. The electrophoresis method includes injecting the biological substances into the injection hole, and applying an electric field penetrating the injection and recovery holes. A vertical axis in a downward direction as a positive direction is set as an X-axis, an axis which is perpendicular to the X-axis is set as a Y-axis, and coordinates of a bottom of the recovery hole are set as (XC, YC). The X coordinate XC of the bottom of the recovery hole satisfies XC>X1 when the biological substance is electrophoresed to coordinates (X1, YC) in the recovery hole from a bottom of the injection hole in the applying the electric field.
    Type: Application
    Filed: May 28, 2019
    Publication date: August 12, 2021
    Applicant: HITACHI HIGH-TECH CORPORATION
    Inventors: Mima OGAWA, Takahide YOKOI, Chihiro UEMATSU
  • Publication number: 20210189467
    Abstract: The present disclosure proposes a probe including a sequence recognition portion that is capable of specifically binding to a desired DNA sequence, and a first probe portion that includes a plurality of 3-dimensional structures arranged downstream from an end of the sequence recognition portion, in which the plurality of 3-dimensional structures are arranged in an order so that the order corresponds one-to-one with the DNA sequence.
    Type: Application
    Filed: December 2, 2020
    Publication date: June 24, 2021
    Inventors: Itaru YANAGI, Takahide YOKOI
  • Publication number: 20210132034
    Abstract: Conventionally, only a pair of electrodes is provided and nanopores arranged in parallel are connected by an electrolyte solution, and therefore a change in anion current to be measured is a sum of changes in ion currents generated in the respective nanopores.
    Type: Application
    Filed: December 16, 2020
    Publication date: May 6, 2021
    Inventors: Takahide Yokoi, Takashi Anazawa
  • Patent number: 10996211
    Abstract: An object of the present invention is to solve inhibition of biopolymer measurement in a nanopore, which involves three-dimensional conformation of a biopolymer containing a nucleic acid. The present invention provides a device for analyzing a biopolymer containing a nucleic acid, the device including: an array device including a plurality of thin film parts having a nanopore; a single common container and a plurality of individual containers capable of storing a measurement solution which is brought into contact with the thin films; and individual electrodes respectively provided in the plurality of individual containers, wherein: the measurement solution is introduced into each of the individual containers and the common container so as to be brought into contact with the thin films; and the measurement solution has a pH equal to or greater than pKa of a guanine base and contains cesium ions as electrolyte cations.
    Type: Grant
    Filed: October 20, 2016
    Date of Patent: May 4, 2021
    Assignee: HITACHI HIGH-TECH CORPORATION
    Inventors: Yusuke Goto, Takahide Yokoi
  • Publication number: 20210108168
    Abstract: Provided is a technique for easily trapping microbiota in a sample. A microbiota trapping device of the present disclosure includes a first solution tank having a first filter adapted to trap residue in a sample, and a second solution tank having a second filter adapted to trap bacteria in the sample. The second solution tank has a vent above the second filter.
    Type: Application
    Filed: September 8, 2020
    Publication date: April 15, 2021
    Inventor: Takahide YOKOI
  • Patent number: 10908143
    Abstract: Conventionally, only a pair of electrodes is provided and nanopores arranged in parallel are connected by an electrolyte solution, and therefore a change in an ion current to be measured is a sum of changes in ion currents generated in the respective nanopores.
    Type: Grant
    Filed: November 27, 2013
    Date of Patent: February 2, 2021
    Assignee: Hitachi, Ltd.
    Inventors: Takahide Yokoi, Takashi Anazawa
  • Publication number: 20200102587
    Abstract: Provided are a method and apparatus for forming clusters of amplified nucleic acid fragments without amplification bias, in a regular arrangement on a substrate. In the method according to the present invention, droplets enclosing the template nucleic acid are formed on a substrate that has a plurality of first surfaces having hydrophilicity and a second surface surrounding each of the plurality of first surfaces and being less hydrophilic than the first surfaces. Then, after a nucleic acid amplification reaction is performed in the droplets on the substrate, the droplets are removed and a nucleic acid amplification reaction is further performed on the substrate.
    Type: Application
    Filed: April 5, 2017
    Publication date: April 2, 2020
    Inventors: Takahide YOKOI, Chihiro UEMATSU, Naoshi ITABASHI
  • Publication number: 20190353636
    Abstract: Provided are a first tank; a second tank; a thin film having a nanopore, which communicates the first tank to the second tank, and disposed between the first and second tanks; a first electrode provided in the first tank; and a second electrode provided in the second tank. A wall surface of the nanopore has an ion adsorption preventing structure to prevent desorption/adsorption of an ion contained in a solution filling the first tank and/or the second tank, and a voltage is applied between the first and second electrodes to measure an ion current flowing through the nanopore.
    Type: Application
    Filed: January 10, 2017
    Publication date: November 21, 2019
    Applicant: HITACHI HIGH-TECHNOLOGIES CORPORATION
    Inventors: Kazuma MATSUI, Yusuke GOTO, Rena AKAHORI, Takahide YOKOI, Michiru FUJIOKA
  • Publication number: 20190352699
    Abstract: The present invention is directed to provide new PCR measuring method and device. As one embodiment of the present invention, a DNA detection method for detecting DNA in a droplet being present in oil, the droplet containing the DNA and a fluorescent labeled probe, the fluorescent labeled probe being hybridized to the DNA, the method including: a first step of amplifying the DNA in the the droplet by a nucleic acid amplification reaction; and a second step of measuring a melting temperature of the fluorescent labeled probe and the DNA in the droplet is provided.
    Type: Application
    Filed: November 16, 2017
    Publication date: November 21, 2019
    Inventors: Junko TANAKA, Takahide YOKOI, Masao KAMAHORI, Yoshinobu KOHARA
  • Patent number: 10451584
    Abstract: Provided is a biomolecule measuring device capable of effectively reducing measurement noise occurring when measuring a biomolecule sample using a semiconductor sensor. This biomolecule measuring device generates a trigger to react a sample with a reagent after starting to send the reagent onto the semiconductor sensor that detects ion concentration (see FIG. 7).
    Type: Grant
    Filed: November 18, 2013
    Date of Patent: October 22, 2019
    Assignee: Hitachi High-Technologies Corporation
    Inventors: Yoshimitsu Yanagawa, Takahide Yokoi, Naoshi Itabashi, Takayuki Kawahara, Sonoko Migitaka, Makiko Yoshida, Takamichi Muramatsu
  • Publication number: 20190292589
    Abstract: The purpose of the invention is to provide a method for analyzing biomolecules with which it is possible to easily suppress the occlusion of nanopores. The first embodiment of the invention is a method for analyzing biomolecules including a step for preparing a substrate having nanopores, a step for placing a sample solution including biomolecules and at least one compound selected from the group consisting of primary amines, secondary amines, guanidine compounds, and salts thereof on the substrate, and a step for detecting the changes in light or electrical signal generated when the biomolecules pass through the nanopores.
    Type: Application
    Filed: June 10, 2016
    Publication date: September 26, 2019
    Inventors: Michiru FUJIOKA, Yusuke GOTO, Takahide YOKOI