Patents by Inventor Timothy Kassis

Timothy Kassis has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20250060343
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Application
    Filed: June 27, 2024
    Publication date: February 20, 2025
    Inventors: Timothy KASSIS, Jefferson PRUYNE, Mark D. SIMON, Mimoun CADOSCH DELMAR AKERMAN, Jennifer CAMPBELL, Ana HENRIQUES DA COSTA, Laura KOLINSKY, John M. GEREMIA
  • Patent number: 12146869
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Grant
    Filed: July 14, 2023
    Date of Patent: November 19, 2024
    Assignee: MATTERWORKS INC
    Inventors: Timothy Kassis, Jefferson Pruyne, Mark D. Simon, Mimoun Cadosch Delmar Akerman, Jennifer Campbell, Ana Henriques Da Costa, Laura Kolinsky, John M. Geremia
  • Patent number: 12100484
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Grant
    Filed: September 7, 2022
    Date of Patent: September 24, 2024
    Assignee: Matterworks Inc
    Inventors: Timothy Kassis, Jefferson Pruyne, Mark D. Simon, Mimoun Cadosch Delmar Akerman, Jennifer Campbell, Ana Henriques da Costa, Laura Kolinsky, John M. Geremia
  • Publication number: 20240167986
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Application
    Filed: July 14, 2023
    Publication date: May 23, 2024
    Inventors: Timothy KASSIS, Jefferson PRUYNE, Mark D. SIMON, Mimoun CADOSCH DELMAR AKERMAN, Jennifer CAMPBELL, Ana HENRIQUES DA COSTA, Laura KOLINSKY, John M. GEREMIA
  • Patent number: 11754536
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Grant
    Filed: September 7, 2022
    Date of Patent: September 12, 2023
    Assignee: MATTERWORKS INC
    Inventors: Timothy Kassis, Jefferson Pruyne, Mark D. Simon, Mimoun Cadosch Delmar Akerman, Jennifer Campbell, Ana Henriques Da Costa, Laura Kolinsky, John M. Geremia
  • Publication number: 20230170049
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Application
    Filed: September 7, 2022
    Publication date: June 1, 2023
    Inventors: Timothy KASSIS, Jefferson PRUYNE, Mark D. SIMON, Mimoun CADOSCH DELMAR AKERMAN, Jennifer CAMPBELL, Ana HENRIQUES DA COSTA, Laura KOLINSKY, John M. GEREMIA
  • Publication number: 20230137741
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Application
    Filed: September 7, 2022
    Publication date: May 4, 2023
    Inventors: Timothy KASSIS, Jefferson PRUYNE, Mark D. SIMON, Mimoun CADOSCH DELMAR AKERMAN, Jennifer CAMPBELL, Ana HENRIQUES DA COSTA, Laura KOLINSKY, John M. GEREMIA
  • Publication number: 20230133615
    Abstract: Disclosed are methods, libraries, and samples for quantifying a target analyte in a laboratory sample including the target analyte. The methods typically include the step of estimating the amount of the target analyte in the laboratory sample from mass spectrometric data including signal intensities for the target analyte and one or more internal standards, where the mass spectrometric data are an output of a mass spectrometric analysis of a target sample produced from the laboratory sample and a predetermined amount of the one or more internal standards. The present disclosure also provides a method for analyte quantification. The method comprises adding one or more calibrators to a sample comprising one or more analytes; applying mass spectrometry (MS) to the sample; and using a trained machine learning model to determine an absolute concentration of the one or more analytes.
    Type: Application
    Filed: September 7, 2022
    Publication date: May 4, 2023
    Inventors: Timothy KASSIS, Jefferson PRUYNE, Mark D. SIMON, Mimoun CADOSCH DELMAR AKERMAN, Jennifer CAMPBELL, Ana HENRIQUES DA COSTA, Laura KOLINSKY, John M. GEREMIA
  • Publication number: 20180272346
    Abstract: Fluidic multiwell bioreactors are provided as a microphysiological platform for in vitro investigation of multi-organ crosstalks with microbiome for an extended period of time of at least weeks and months. The platform has one or more improvements over existing bioreactors, including on-board pumping for pneumatically driven fluid flow, a redesigned spillway for self-leveling from source to sink, a non-contact built-in fluid level sensing device, precise control on fluid flow profile and partitioning, and facile reconfigurations such as daisy chaining and multilayer stacking. The platform supports the culture of multiple organs together with microbiome in a microphysiological, interacted systems, suitable for a wide range of biomedical applications including systemic toxicity studies and physiology-based pharmacokinetic and pharmacodynamic predictions. A process to fabricate the bioreactors is also provided.
    Type: Application
    Filed: March 20, 2018
    Publication date: September 27, 2018
    Inventors: Linda G. Griffith, David Trumper, Collin Edington, Gaurav Rohatgi, Duncan Freake, Luis Soenksen, Timothy Kassis, Mohan Brij Bhushan
  • Publication number: 20160235354
    Abstract: The present invention comprises methods for detecting, monitoring and treating lymphedema by using imaging devices to generate patient anatomical information from which body part volume measurements or geometries can be derived. Yet further, the present invention comprises methods of fitting compression garments for treatment of lymphedema by using the anatomical measurements derived from the patient anatomical information.
    Type: Application
    Filed: February 11, 2016
    Publication date: August 18, 2016
    Applicant: Lymphatech, Inc.
    Inventors: Michael J. Weiler, James B. Dixon, Sebastian Pokutta, Daniel Zink, Timothy Kassis