Patents by Inventor Tomoharu Kajiyama

Tomoharu Kajiyama has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20170016814
    Abstract: An object is to provide a biomolecule analyzer capable of collecting and analyzing a biomolecule in a single cell without damaging neighboring cells. In order to achieve this object, a biomolecule analyzer according to the present invention is characterized by including a unit which obtains an optical image of a plurality of cells, a unit which disrupts a part or the whole of at least one cell of the plurality of cells, an array device in which regions for capturing a biomolecule in the cell released by the disrupting unit are arranged, and a unit which associates the region in which the biomolecule is captured in the array device with a portion corresponding to the cell disrupted by the disrupting unit in the optical image.
    Type: Application
    Filed: December 27, 2013
    Publication date: January 19, 2017
    Applicant: HITACHI, LTD.
    Inventors: Masataka Shirai, Hideki Kambara, Tomoharu Kajiyama
  • Publication number: 20160333397
    Abstract: A reaction liquid after a nucleic acid amplification reaction is made suitable for various processes. A step of measuring the amount of a target product and the amount of a byproduct after performing a nucleic acid amplification reaction, and a step of determining that a process for removing the byproduct is needed when the abundance ratio of the target product to the byproduct is lower than a prescribed value, and determining the dilution ratio of a reaction liquid after the nucleic acid amplification reaction when the abundance ratio is higher than the prescribed value are included.
    Type: Application
    Filed: January 27, 2014
    Publication date: November 17, 2016
    Applicant: HITACHI, LTD.
    Inventors: Hiroko Matsunaga, Tomoharu Kajiyama, Mari Ohta, Hideki Kambara
  • Patent number: 9428795
    Abstract: To provide a means and a method of quickly sampling a tissue fragment from a plant tissue, quickly preserving a gene expression state within the tissue fragment, and comprehensively analyzing the gene expression state. The present invention relates to a method of sampling a plant tissue section, comprising: inserting a first gel layer into a needle; arranging a plant tissue on a second gel layer; and passing the needle through the plant tissue together with the second gel layer, and sampling a section of the plant tissue in the needle.
    Type: Grant
    Filed: December 18, 2012
    Date of Patent: August 30, 2016
    Assignee: Hitachi, Ltd.
    Inventors: Tomoharu Kajiyama, Hideki Kambara, Toru Habu
  • Patent number: 9278355
    Abstract: This invention provides a nucleic acid amplification device whereby the abundance of a target molecule can be maintained before and after a step of separately amplifying a sample such that highly accurate analysis results that can be applied to gene expression analysis can be obtained. Also, a nucleic acid amplification device having a structure in which a plurality of minute reaction cells each comprising a set of a bead-retaining space capable of retaining a single analysis bead and a reagent reaction space retaining no bead but having a volume that is large enough to cause a reagent reaction therein are positioned so as to form a planar face is provided.
    Type: Grant
    Filed: November 13, 2008
    Date of Patent: March 8, 2016
    Assignee: Hitachi, Ltd.
    Inventors: Tomoharu Kajiyama, Masataka Shirai, Hideki Kambara
  • Publication number: 20150159202
    Abstract: A method of synthesizing cDNA, in sequence, includes picking up a whole single-cell from a sample containing at least a single-cell having a cell membrane, lysing the cell membrane and extracting nucleic acids from the cell, degrading DNA of the extracted nucleic acids with DNase, hybridizing mRNA of the total RNA contained in the whole single-cell with oligo (dT) fixed onto a carrier, performing reverse transcription of the mRNA hybridized with the oligo (dT) to fix cDNA derived from the single-cell onto the carrier, thereby preparing a single-cell derived cDNA library fixed onto a carrier, and amplifying cDNA fixed onto the carrier.
    Type: Application
    Filed: August 1, 2014
    Publication date: June 11, 2015
    Inventors: Kiyomi TANIGUCHI, Hideki Kambara, Tomoharu Kajiyama
  • Publication number: 20150018243
    Abstract: To provide a means and a method of quickly sampling a tissue fragment from a plant tissue, quickly preserving a gene expression state within the tissue fragment, and comprehensively analyzing the gene expression state. The present invention relates to a method of sampling a plant tissue section, comprising: inserting a first gel layer into a needle; arranging a plant tissue on a second gel layer; and passing the needle through the plant tissue together with the second gel layer, and sampling a section of the plant tissue in the needle.
    Type: Application
    Filed: December 18, 2012
    Publication date: January 15, 2015
    Inventors: Tomoharu Kajiyama, Hideki Kambara, Toru Habu
  • Patent number: 8853373
    Abstract: Provided is a nucleic acid substrate which has nucleic acid substrate characteristics equivalent to those of dATP, has a low substrate specificity for luciferase, exerts no negative effect on enzymatic reactions such as a complementary-strand synthesis, and therefore is particularly suitable for the pyrosequencing method. As a nucleic acid substrate complementary to nucleotide T, a 7-substituted deoxyribonucleotide triphosphate whose 7-position of a purine group is modified by a substituent is used as a substitute for a nucleotide ?-thiotriphosphate analog.
    Type: Grant
    Filed: August 10, 2010
    Date of Patent: October 7, 2014
    Assignees: Hitachi, Ltd., National University Corporation Gunma University
    Inventors: Masayasu Kuwahara, Tomoharu Kajiyama, Hideki Kambara
  • Patent number: 8802367
    Abstract: It is an object to provide a method of suitably analyzing the amount of gene expression of a single-cell. A method of detecting a nucleic acid comprising a step of sampling a single-cell from a sample containing at least a single-cell, a cell lysis step of lysing cell membrane of the sampled single-cell and extracting nucleic acids from the cell, a DNase treatment step of degrading DNA of the extracted nucleic acids with DNase, a step of hybridizing mRNA of the total RNA contained in the single-cell with oligo (dT) fixed onto a carrier, a step of performing reverse transcription of the mRNA hybridized with the oligo (dT) to fix cDNA derived from the single-cell onto the carrier, thereby preparing a single-cell derived cDNA library fixed onto a carrier, and a step of amplifying cDNA fixed onto the carrier and simultaneously detecting an amplification amount of the cDNA.
    Type: Grant
    Filed: April 10, 2007
    Date of Patent: August 12, 2014
    Assignee: Hitachi, Ltd.
    Inventors: Kiyomi Taniguchi, Hideki Kambara, Tomoharu Kajiyama
  • Publication number: 20120270210
    Abstract: Provided is a nucleic acid substrate which has nucleic acid substrate characteristics equivalent to those of dATP, has a low substrate specificity for luciferase, exerts no negative effect on enzymatic reactions such as a complementary-strand synthesis, and therefore is particularly suitable for the pyrosequencing method. As a nucleic acid substrate complementary to nucleotide T, a 7-substituted deoxyribonucleotide triphosphate whose 7-position of a purine group is modified by a substituent is used as a substitute for a nucleotide ?-thiotriphosphate analog.
    Type: Application
    Filed: August 10, 2010
    Publication date: October 25, 2012
    Inventors: Masayasu Kuwahara, Tomoharu Kajiyama, Hideki Kambara
  • Patent number: 8246908
    Abstract: By the conventional technique for dispensing more than one reagents accurately, the system is complicated and thus a compact and inexpensive system is difficult to realize. In the present invention, the pressurized dispensing system utilizing a capillary is realized, and in addition, in order to reduce the leakage of reagents different from the reagent dispensed, by forming air layers at the tips of the capillaries after dispensing, a compact, simple, inexpensive analysis apparatus is realized.
    Type: Grant
    Filed: February 21, 2007
    Date of Patent: August 21, 2012
    Assignee: Hitachi Ltd.
    Inventors: Tomoharu Kajiyama, Hideki Kambara, Kunio Harada
  • Patent number: 8231828
    Abstract: By the conventional technique for dispensing more than one reagents accurately, the system is complicated and thus a compact and inexpensive system is difficult to realize. In the present invention, the pressurized dispensing system utilizing a capillary is realized, and in addition, in order to reduce the leakage of reagents different from the reagent dispensed, by forming air layers at the tips of the capillaries after dispensing, a compact, simple, inexpensive analysis apparatus is realized.
    Type: Grant
    Filed: November 20, 2006
    Date of Patent: July 31, 2012
    Assignee: Hitachi, Ltd.
    Inventors: Tomoharu Kajiyama, Hideki Kambara, Kunio Harada
  • Publication number: 20110244448
    Abstract: A chemiluminescence detecting apparatus includes a thing called a plate where many reaction chambers are one-dimensionally or two-dimensionally arranged, and enzymes packed in a gel and DNA-immobilized beads are simultaneously charged into the reaction chambers, thereby trapping a large amount of enzymes in the reaction chambers, improving enzyme activity and achieving high sensitive pyrosequencing.
    Type: Application
    Filed: August 31, 2009
    Publication date: October 6, 2011
    Inventors: Masataka Shirai, Tomoharu Kajiyama, Hideki Kambara
  • Publication number: 20090215162
    Abstract: This invention provides a nucleic acid amplification device whereby the abundance of a target molecule can be maintained before and after a step of separately amplifying a sample such that highly accurate analysis results that can be applied to gene expression analysis can be obtained. Also, a nucleic acid amplification device having a structure in which a plurality of minute reaction cells each comprising a set of a bead-retaining space capable of retaining a single analysis bead and a reagent reaction space retaining no bead but having a volume that is large enough to cause a reagent reaction therein are positioned so as to form a planar face is provided.
    Type: Application
    Filed: November 13, 2008
    Publication date: August 27, 2009
    Inventors: Tomoharu Kajiyama, Masataka Shirai, Hideki Kambara
  • Publication number: 20090087344
    Abstract: By the conventional technique for dispensing more than one reagents accurately, the system is complicated and thus a compact and inexpensive system is difficult to realize. In the present invention, the pressurized dispensing system utilizing a capillary is realized, and in addition, in order to reduce the leakage of reagents different from the reagent dispensed, by forming air layers at the tips of the capillaries after dispensing, a compact, simple, inexpensive analysis apparatus is realized.
    Type: Application
    Filed: February 21, 2007
    Publication date: April 2, 2009
    Inventors: Tomoharu Kajiyama, Hideki Kambara, Kunio Harada
  • Publication number: 20080318244
    Abstract: It is intended to provide a technique for amplifying, individually and in parallel, nucleic acids contained in a mixture of plural kinds of nucleic acid samples. The present invention provides a nucleic acid analysis method comprising amplification means, whereby amplification reaction is performed in a reaction solution comprising a homogeneous solvent and comprising at least plural template nucleic acids and solid phase carriers comprising one or more kinds of amplification probes immobilized on the surface, to prevent amplified products attributed to two or more template nucleic acids from being replicated in one solid phase carrier. According to the present invention, plural kinds of analyte nucleic acid samples in a mixed state can be amplified individually and in parallel. This method achieves one solid phase carrier-one nucleic acid. Therefore, a higher density of solid phase carriers with obtained amplified products is easily achieved, leading to improved throughput of amplified product analysis.
    Type: Application
    Filed: June 19, 2008
    Publication date: December 25, 2008
    Inventors: Hiroko Matsunaga, Hideki Kambara, Tomoharu Kajiyama
  • Publication number: 20080317627
    Abstract: The present invention aims to achieve both rapid supply of reagent substances to micro-chambers and inhibition of contamination from adjacent chambers. For achieving the above objects, the shape of a flow channel in a flow cell including a plate having micro-chambers is varied between the time of substance supply and the time of luminescence reaction.
    Type: Application
    Filed: June 20, 2008
    Publication date: December 25, 2008
    Inventors: Masataka SHIRAI, Tomoharu KAJIYAMA, Hideki KAMBARA
  • Publication number: 20080260577
    Abstract: Throughput is improved by increasing the number of micro-reaction chambers. There is provided a chemiluminescent detection system that has a so-called plate on which many reaction chambers are one-dimensionally or two-dimensionally arranged, characterized in that optical detection is performed using a line or area sensor having many detection pixels, the spacing of the optical detection pixels substantially matches the spacing of the reaction chambers on the plate, and the micro-reaction chambers and the pixels are made to correspond one-to-one with each other so that light from the reaction chambers on the plate enters the detection pixels most efficiently and does not scatter to other pixels. To make the micro-reaction chambers arrayed on the plate and the pixels of the image pickup element plate correspond one-to-one with each other, light-emitting substances or reflectors or photoabsorption substances are placed so as to serve as alignment marks.
    Type: Application
    Filed: February 15, 2008
    Publication date: October 23, 2008
    Inventors: Masataka SHIRAI, Tomoharu Kajiyama, Hideki Kambara
  • Publication number: 20080102469
    Abstract: A conventional large-scale parallel pyrosequencing apparatus has the disadvantage that throughput decreases because much time and a large number of procedures are required for introduction of measurement beads, and analysis accuracy is deteriorated due to a reduction in accuracy of reagent replacement. There is provided an apparatus, wherein the apparatus includes a flow cell having a plurality of microfabricated reactors, and a camera opposed thereto, and DNA to be measured is fixed on the surfaces of beads having a specific gravity of 4 or greater, preferably zirconia beads. The flow cell is made horizontal when introducing the beads into the flow cell, and opposed to an optical axis of the camera when measuring an elongation reaction, the optical axis of the camera having a gradient with respect to the horizontal direction.
    Type: Application
    Filed: October 30, 2007
    Publication date: May 1, 2008
    Inventors: Tomoharu KAJIYAMA, Masataka SHIRAI, Hideki KAMBARA
  • Publication number: 20070281313
    Abstract: It is an object to provide a method of suitably analyzing the amount of gene expression of a single-cell. A method of detecting a nucleic acid comprising a step of sampling a single-cell from a sample containing at least a single-cell, a cell lysis step of lysing cell membrane of the sampled single-cell and extracting nucleic acids from the cell, a DNase treatment step of degrading DNA of the extracted nucleic acids with DNase, a step of hybridizing mRNA of the total RNA contained in the single-cell with oligo (dT) fixed onto a carrier, a step of performing reverse transcription of the mRNA hybridized with the oligo (dT) to fix cDNA derived from the single-cell onto the carrier, thereby preparing a single-cell derived cDNA library fixed onto a carrier, and a step of amplifying cDNA fixed onto the carrier and simultaneously detecting an amplification amount of the cDNA.
    Type: Application
    Filed: April 10, 2007
    Publication date: December 6, 2007
    Inventors: Kiyomi Taniguchi, Hideki Kambara, Tomoharu Kajiyama
  • Publication number: 20070166729
    Abstract: The present invention provides: a method for nucleic acid analysis including the steps of subjecting a reaction solution containing a sample nucleic acid to complementary strand synthesis with the sample nucleic acid as a template, reacting pyrophosphate produced in the complementary strand synthesis with 30 to 800 ?M AMP in the coexistence of pyruvate phosphate dikinase to produce ATP, performing luciferase reaction with the ATP as a reaction substrate, and detecting chemiluminescence generated in the luciferase reaction to determine the presence or absence of the complementary strand synthesis; and a kit therefor.
    Type: Application
    Filed: October 4, 2006
    Publication date: July 19, 2007
    Inventors: Hideki Kambara, Guohua Zhou, Tomoharu Kajiyama, Shigeya Suzuki