Patents by Inventor Xianglilan Zhang

Xianglilan Zhang has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Methods and systems for de novo peptide sequencing using deep learning
    Patent number: 11573239
    Abstract: The present systems and methods introduce deep learning to de novo peptide sequencing from tandem mass spectrometry data. The systems and methods achieve improvements in sequencing accuracy over existing systems and methods and enables complete assembly of novel protein sequences without assisting databases. The present systems and methods are re-trainable to adapt to new sources of data and provides a complete end-to-end training and prediction solution, which is advantageous given the growing massive amount of data. The systems and methods combine deep learning and dynamic programming to solve optimization problems.
    Type: Grant
    Filed: July 17, 2018
    Date of Patent: February 7, 2023
    Assignee: BIOINFORMATICS SOLUTIONS INC.
    Inventors: Baozhen Shan, Ngoc Hieu Tran, Ming Li, Lei Xin, Xianglilan Zhang
  • METHODS AND SYSTEMS FOR DE NOVO PEPTIDE SEQUENCING USING DEEP LEARNING
    Publication number: 20190018019
    Abstract: The present systems and methods introduce deep learning to de novo peptide sequencing from tandem mass spectrometry data. The systems and methods achieve improvements in sequencing accuracy over existing systems and methods and enables complete assembly of novel protein sequences without assisting databases. The present systems and methods are re-trainable to adapt to new sources of data and provides a complete end-to-end training and prediction solution, which is advantageous given the growing massive amount of data. The systems and methods combine deep learning and dynamic programming to solve optimization problems.
    Type: Application
    Filed: July 17, 2018
    Publication date: January 17, 2019
    Inventors: Baozhen Shan, Ngoc Hieu Tran, Ming Li, Lei Xin, Xianglilan Zhang