Patents by Inventor Yong Joo Kil

Yong Joo Kil has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20230343569
    Abstract: This invention relates to graphical user-interactive displays for use in MS-based analysis of protein impurities, as well as methods and software for generating and using such. One aspect provides a user-interactive display comprising interactive and dynamic selection of one or more masses and concurrent display of peaks (points) corresponding to that predicted mass value across other displays (MS1, deconvolved mass spectrum, mass extracted ion chromatogram, etc.).
    Type: Application
    Filed: April 10, 2023
    Publication date: October 26, 2023
    Inventors: Marshall BERN, Yong Joo KIL
  • Patent number: 11626274
    Abstract: This invention relates to graphical user-interactive displays for use in MS-based analysis of protein impurities, as well as methods and software for generating and using such. One aspect provides a user-interactive display comprising interactive and dynamic selection of one or more masses and concurrent display of peaks (points) corresponding to that predicted mass value across other displays (MS1, deconvolved mass spectrum, etc.).
    Type: Grant
    Filed: April 26, 2021
    Date of Patent: April 11, 2023
    Assignee: Protein Metrics, LLC
    Inventors: Marshall Bern, Yong Joo Kil
  • Publication number: 20220301840
    Abstract: This invention relates to graphical user-interactive analysis of data, including in particular, mass spectrographic data analysis, as well as methods and software for generating and using such. One aspect provides user-customizable reports, including methods and apparatuses for generating customizable pivot tables and graphs specific to mass spectrographic data.
    Type: Application
    Filed: March 28, 2022
    Publication date: September 22, 2022
    Inventors: Yong Joo KIL, Eric CARLSON
  • Publication number: 20220291229
    Abstract: Methods and apparatuses for the identification and/or characterization of properties of a macromolecule based on mass spectrometry data. Specifically, described herein are methods and apparatuses for converting peptide-level data into a pseudo-intact mass spectra. Also described herein are methods and apparatuses for converting peptide-level data into a pseudo-electropherogram. The methods may be well suited for analyzing proteins and protein complexes, including estimating properties of post-translational modifications of the proteins and protein complexes. Methods may include generating a theoretical graph or spectrum based on peptide-level mass spectrometry data. In some embodiments, the theoretical graph may be a theoretical intact mass spectrum or a theoretical charge distribution spectrum.
    Type: Application
    Filed: May 31, 2022
    Publication date: September 15, 2022
    Inventors: Andrew NICHOLS, Marshall BERN, Yong Joo KIL, Eric CARLSON
  • Patent number: 11346844
    Abstract: Methods and apparatuses for the identification and/or characterization of properties of a macromolecule based on mass spectrometry data. Specifically, described herein are methods and apparatuses for converting peptide-level data into a pseudo-intact mass spectra. Also described herein are methods and apparatuses for converting peptide-level data into a pseudo-electropherogram. The methods may be well suited for analyzing proteins and protein complexes, including estimating properties of post-translational modifications of the proteins and protein complexes. Methods may include generating a theoretical graph or spectrum based on peptide-level mass spectrometry data. In some embodiments, the theoretical graph may be a theoretical intact mass spectrum or a theoretical charge distribution spectrum.
    Type: Grant
    Filed: April 27, 2020
    Date of Patent: May 31, 2022
    Assignee: Protein Metrics Inc.
    Inventors: Andrew Nichols, Marshall Bern, Yong Joo Kil, Eric Carlson
  • Patent number: 11289317
    Abstract: This invention relates to graphical user-interactive analysis of data, including in particular, mass spectrographic data analysis, as well as methods and software for generating and using such. One aspect provides user-customizable reports, including methods and apparatuses for generating customizable pivot tables and graphs specific to mass spectrographic data.
    Type: Grant
    Filed: December 28, 2020
    Date of Patent: March 29, 2022
    Assignee: Protein Metrics Inc.
    Inventors: Yong Joo Kil, Eric Carlson
  • Publication number: 20210335589
    Abstract: This invention relates to graphical user-interactive displays for use in MS-based analysis of protein impurities, as well as methods and software for generating and using such. One aspect provides a user-interactive display comprising interactive and dynamic selection of one or more masses and concurrent display of peaks (points) corresponding to that predicted mass value across other displays (MS1, deconvolved mass spectrum, etc.).
    Type: Application
    Filed: April 26, 2021
    Publication date: October 28, 2021
    Inventors: Marshall BERN, Yong Joo KIL
  • Patent number: 10991558
    Abstract: This invention relates to graphical user-interactive displays for use in MS-based analysis of protein impurities, as well as methods and software for generating and using such. One aspect provides a user-interactive display comprising interactive and dynamic selection of one or more masses and concurrent display of peaks (points) corresponding to that predicted mass value across other displays (MS1, deconvolved mass spectrum, etc.).
    Type: Grant
    Filed: January 27, 2020
    Date of Patent: April 27, 2021
    Assignee: Protein Metrics Inc.
    Inventors: Marshall Bern, Yong Joo Kil
  • Publication number: 20210118659
    Abstract: This invention relates to graphical user-interactive analysis of data, including in particular, mass spectrographic data analysis, as well as methods and software for generating and using such. One aspect provides user-customizable reports, including methods and apparatuses for generating customizable pivot tables and graphs specific to mass spectrographic data.
    Type: Application
    Filed: December 28, 2020
    Publication date: April 22, 2021
    Inventors: Yong Joo KIL, Eric CARLSON
  • Publication number: 20210048440
    Abstract: Methods and apparatuses for the identification and/or characterization of properties of a macromolecule based on mass spectrometry data. Specifically, described herein are methods and apparatuses for converting peptide-level data into a pseudo-intact mass spectra. Also described herein are methods and apparatuses for converting peptide-level data into a pseudo-electropherogram. The methods may be well suited for analyzing proteins and protein complexes, including estimating properties of post-translational modifications of the proteins and protein complexes. Methods may include generating a theoretical graph or spectrum based on peptide-level mass spectrometry data. In some embodiments, the theoretical graph may be a theoretical intact mass spectrum or a theoretical charge distribution spectrum.
    Type: Application
    Filed: April 27, 2020
    Publication date: February 18, 2021
    Inventors: Andrew NICHOLS, Marshall BERN, Yong Joo KIL, Eric CARLSON
  • Patent number: 10879057
    Abstract: This invention relates to graphical user-interactive analysis of data, including in particular, mass spectrographic data analysis, as well as methods and software for generating and using such. One aspect provides user-customizable reports, including methods and apparatuses for generating customizable pivot tables and graphs specific to mass spectrographic data.
    Type: Grant
    Filed: December 13, 2019
    Date of Patent: December 29, 2020
    Assignee: Protein Metrics Inc.
    Inventors: Yong Joo Kil, Eric Carlson
  • Publication number: 20200243313
    Abstract: This invention relates to graphical user-interactive displays for use in MS-based analysis of protein impurities, as well as methods and software for generating and using such. One aspect provides a user-interactive display comprising interactive and dynamic selection of one or more masses and concurrent display of peaks (points) corresponding to that predicted mass value across other displays (MS1, deconvolved mass spectrum, etc.).
    Type: Application
    Filed: January 27, 2020
    Publication date: July 30, 2020
    Inventors: Marshall BERN, Yong Joo KIL
  • Publication number: 20200234937
    Abstract: This invention relates to graphical user-interactive analysis of data, including in particular, mass spectrographic data analysis, as well as methods and software for generating and using such. One aspect provides user-customizable reports, including methods and apparatuses for generating customizable pivot tables and graphs specific to mass spectrographic data.
    Type: Application
    Filed: December 13, 2019
    Publication date: July 23, 2020
    Inventors: Yong Joo KIL, Eric CARLSON
  • Patent number: 10546736
    Abstract: This invention relates to graphical user-interactive displays for use in MS-based analysis of protein impurities, as well as methods and software for generating and using such. One aspect provides a user-interactive display comprising interactive and dynamic selection of one or more masses and concurrent display of peaks (points) corresponding to that predicted mass value across other displays (MS1, deconvolved mass spectrum, etc.).
    Type: Grant
    Filed: August 1, 2018
    Date of Patent: January 28, 2020
    Assignee: Protein Metrics Inc.
    Inventors: Marshall Bern, Yong Joo Kil
  • Patent number: 10510521
    Abstract: This invention relates to graphical user-interactive analysis of data, including in particular, mass spectrographic data analysis, as well as methods and software for generating and using such. One aspect provides user-customizable reports, including methods and apparatuses for generating customizable pivot tables and graphs specific to mass spectrographic data.
    Type: Grant
    Filed: October 1, 2018
    Date of Patent: December 17, 2019
    Assignee: Protein Metrics Inc.
    Inventors: Yong Joo Kil, Eric Carlson
  • Patent number: 10354421
    Abstract: Methods and apparatuses for the analysis of mass spectroscopic (MS) data as well as ultraviolet (UV) absorption data. In particular, described herein are tools and methods to assist in generating annotated peptide maps from a raw MS data.
    Type: Grant
    Filed: March 10, 2016
    Date of Patent: July 16, 2019
    Assignee: Protein Metrics Inc.
    Inventors: Christopher Becker, Marshall Bern, Nicholas Bern, Yong Joo Kil, Richard Seipert, Michael Taejong Kim
  • Publication number: 20190103260
    Abstract: This invention relates to graphical user-interactive analysis of data, including in particular, mass spectrographic data analysis, as well as methods and software for generating and using such. One aspect provides user-customizable reports, including methods and apparatuses for generating customizable pivot tables and graphs specific to mass spectrographic data.
    Type: Application
    Filed: October 1, 2018
    Publication date: April 4, 2019
    Inventors: Yong Joo KIL, Eric CARLSON
  • Publication number: 20190043703
    Abstract: This invention relates to graphical user-interactive displays for use in MS-based analysis of protein impurities, as well as methods and software for generating and using such. One aspect provides a user-interactive display comprising interactive and dynamic selection of one or more masses and concurrent display of peaks (points) corresponding to that predicted mass value across other displays (MS1, deconvolved mass spectrum, etc.).
    Type: Application
    Filed: August 1, 2018
    Publication date: February 7, 2019
    Inventors: Marshall BERN, Yong Joo KIL
  • Patent number: 10199206
    Abstract: This invention relates to graphical user-interactive displays for use in MS-based analysis of protein impurities, as well as methods and software for generating and using such. One aspect provides a user-interactive display comprising an extracted mass chromatogram (XIC), an MS1 spectrum and an MS2 spectrum, all simultaneously representing a user-selected peptide. Another aspect provides a user interactive display simultaneously presenting paired spectra (XIC, MS1 and/or MS2) for a variant peptide and its corresponding wildtype counterpart.
    Type: Grant
    Filed: May 1, 2017
    Date of Patent: February 5, 2019
    Assignee: Protein Metrics Inc.
    Inventors: Christopher Becker, Marshall Bern, Yong Joo Kil, Michael Taejong Kim, Boyan Zhang
  • Publication number: 20170236697
    Abstract: This invention relates to graphical user-interactive displays for use in MS-based analysis of protein impurities, as well as methods and software for generating and using such. One aspect provides a user-interactive display comprising an extracted mass chromatogram (XIC), an MS1 spectrum and an MS2 spectrum, all simultaneously representing a user-selected peptide. Another aspect provides a user interactive display simultaneously presenting paired spectra (XIC, MS1 and/or MS2) for a variant peptide and its corresponding wildtype counterpart.
    Type: Application
    Filed: May 1, 2017
    Publication date: August 17, 2017
    Inventors: Christopher BECKER, Marshall BERN, Yong Joo KIL, Michael Taejong KIM, Boyan ZHANG