Patents by Inventor Zachary MILES

Zachary MILES has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240377408
    Abstract: The present disclosure relates to a metalloprotein binder that specifically binds to a N-terminally modified peptide. Also provided herein is methods and related kits for treating or analyzing a peptide using the metalloprotein binder. The methods and compositions provided herein are useful for high-throughput peptide analysis and/or sequencing.
    Type: Application
    Filed: July 5, 2024
    Publication date: November 14, 2024
    Inventors: Eric OKERBERG, Stephen VERESPY, III, Jason C. KLIMA, Soumya GANGULY, Zachary MILES, Jason Duarte JACINTHO, Aaron WISE, Wadud BHUIYA
  • Publication number: 20230220589
    Abstract: The present disclosure relates to a binder that specifically binds to an N-terminally modified polypeptide through interaction with a modified N-terminal amino acid. Also provided herein is a method and related kits for treating a polypeptide using or comprising the binder and/or modified cleavase. In some embodiments, also provided herein is a method and related kits for transferring information using a plurality of enzymes, including for performing a ligation, extension, and cleavage reaction with nucleic acid molecules associated with the polypeptide for analysis.
    Type: Application
    Filed: September 29, 2021
    Publication date: July 13, 2023
    Applicant: Encodia, Inc.
    Inventors: Kevin L. GUNDERSON, Soumya GANGULY, Robert C. JAMES, Kenneth KUHN, Zachary MILES, Lei SHI, Stephen VERESPY, III, Aaron WISE, Zongxiang ZHOU
  • Publication number: 20220283175
    Abstract: The present disclosure relates to a metalloprotein binder that specifically binds to a N-terminally modified peptide. Also provided herein is a method and related kits for treating or analyzing a peptide using the metalloprotein binder and/or modified cleavase. In some embodiments, the method provided herein comprises binding metalloprotein binder-coding tag conjugates to a modified N-terminal amino acid residue of an immobilized peptide associated with a recording tag, transferring identifying information from the coding tag to the recording tag using a ligation or primer extension, and cleaving the modified N-terminal amino acid residue. The method and metalloprotein binders provided herein are useful for de novo peptide identification or sequencing.
    Type: Application
    Filed: April 22, 2022
    Publication date: September 8, 2022
    Applicant: Encodia, Inc.
    Inventors: Eric OKERBERG, Stephen VERESPY, III, Jason C. KLIMA, Soumya GANGULY, Zachary MILES, Jason Duarte JACINTHO, Aaron WISE