Patents by Inventor Zachary Z. SUN

Zachary Z. SUN has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20240043899
    Abstract: Provided herein, in one aspect, is a composition for in vitro transcription and translation, comprising: a treated cell lysate derived from one or more host cells such as bacteria, archaea, plant or animal; a plurality of supplements for gene transcription and translation; an energy recycling system for providing and recycling adenosine triphosphate (ATP); and one or more exogenous additives. Methods for making and using the same are also provided.
    Type: Application
    Filed: May 19, 2023
    Publication date: February 8, 2024
    Inventors: Zachary Z. Sun, Abel C. Chiao, Dan E. Robertson, Louis E. Metzger, Richard Mansfield, Kelly S. Trego
  • Publication number: 20240035060
    Abstract: Provided herein, in one aspect, is a composition for in vitro transcription and translation, comprising: a treated cell lysate derived from one or more organisms such as bacteria, archaea, plant or animal; a plurality of supplements for gene expression; an energy recycling system for providing adenosine triphosphate and recycling adenosine diphosphate; and an engineered propeptide operably linked to a stabilizing domain. Methods for making and using the same are also provided.
    Type: Application
    Filed: May 3, 2023
    Publication date: February 1, 2024
    Inventors: Zachary Z. Sun, Richard Mansfield, Abel C. Chiao, Kelly S. Trego
  • Publication number: 20230212555
    Abstract: Provided herein are methods and compositions for screening using an in vitro transcription/translation (TXTL) system. In some embodiments, a screening method can include: providing a library of genetic candidates to be screened, each genetic candidate encoding one or more protein of interest; expressing each genetic candidate in an in vitro transcription/translation (TXTL) system, thereby producing a plurality of compositions each comprising the one or more protein of interest; and subjecting the plurality of compositions to an assay for assessing a desired phenotype, thereby determining whether the one or more protein of interest exhibits the desired phenotype.
    Type: Application
    Filed: March 1, 2021
    Publication date: July 6, 2023
    Inventor: Zachary Z. Sun
  • Publication number: 20230193337
    Abstract: The present disclosure relates to cell-free compositions and methods for making and using the same. In one aspect, the composition includes: an extract derived from one or more organisms; one or more proteins of interest, wherein the one or more proteins are expressed from one or more nucleic acids exogenous to the extract and/or by the one or more organisms, wherein preferably the one or more proteins react with a substrate to produce a product; and one or more O2, O—, or H2O2 scavengers. The composition may be oxygen-deprived. The composition may also include an energy recycling system.
    Type: Application
    Filed: October 19, 2018
    Publication date: June 22, 2023
    Inventors: Zachary Z. Sun, Dan E. Robertson, Kelly S. Trego, Abel C. Chiao, IV, Louis E. Metzger, IV
  • Publication number: 20220162651
    Abstract: Compositions and methods disclosed herein relate to improved in vitro cell-free systems for various biological reactions. In one aspect, a composition of the present disclosure includes: a cell-free extract derived from an organism; a nucleic acid; and an organelle that is heterologous to the organism.
    Type: Application
    Filed: March 9, 2020
    Publication date: May 26, 2022
    Inventors: Kelly S. Trego, Louis E. Metzger, IV, Abel C. Chiao, Zachary Z. Sun, Dan E. Robertson, IV, Benjamin Mohr
  • Patent number: 11004536
    Abstract: Provided herein are methods and arrangements and related cell-free biomolecular breadboards configured to design, build, implement, debug, and/or test a genetic circuit to be operated in a target environment, by testing in a cell-free system under conditions of the target environment, molecular components of the genetic circuit and/or combinations thereof to select the molecular components and/or combinations thereof of a genetic circuit operative in the target environment.
    Type: Grant
    Filed: February 17, 2016
    Date of Patent: May 11, 2021
    Assignee: California Institute of Technology
    Inventors: Zachary Z. Sun, Richard M. Murray, Vipul Singhal
  • Publication number: 20200181670
    Abstract: Provided herein, in one aspect, is a composition for in vitro transcription and translation, comprising: a treated cell lysate derived from one or more host cells such as bacteria, archaea, plant or animal; a plurality of supplements for gene transcription and translation; an energy recycling system for providing and recycling adenosine triphosphate (ATP); and one or more exogenous additives. Methods for making and using the same are also provided.
    Type: Application
    Filed: August 13, 2018
    Publication date: June 11, 2020
    Inventors: Zachary Z. Sun, Abel C. Chiao, Dan E. Robertson, Louis E. Metzger, IV, Richard Mansfield, Kelly S. Trego
  • Publication number: 20200109429
    Abstract: Provided herein, in one aspect, is a composition for in vitro transcription and translation, comprising: a treated cell lysate derived from one or more organisms such as bacteria, archaea, plant or animal; a plurality of supplements for gene expression; an energy recycling system for providing adenosine triphosphate and recycling adenosine diphosphate; and an engineered propeptide operably linked to a stabilizing domain. Methods for making and using the same are also provided.
    Type: Application
    Filed: March 6, 2018
    Publication date: April 9, 2020
    Inventors: Zachary Z. Sun, Richard Mansfield, Abel Chiao, Kelly Trego
  • Publication number: 20190032047
    Abstract: Provided herein are methods and compositions for rapid assembly of genetic modules, as well as seamless transition from in vitro to in vivo testing of genetic constructs.
    Type: Application
    Filed: June 12, 2018
    Publication date: January 31, 2019
    Inventors: Richard Murray, Zachary Z. Sun
  • Patent number: 10041067
    Abstract: Provided herein are methods and compositions for rapid assembly of genetic modules, as well as seamless transition from in vitro to in vivo testing of genetic constructs.
    Type: Grant
    Filed: April 27, 2016
    Date of Patent: August 7, 2018
    Assignee: California Institute of Technology
    Inventors: Richard Martin Murray, Zachary Z. Sun
  • Publication number: 20170024512
    Abstract: Provided herein are methods and arrangements and related cell-free biomolecular breadboards configured to design, build, implement, debug, and/or test a genetic circuit to be operated in a target environment, by testing in a cell-free system under conditions of the target environment, molecular components of the genetic circuit and/or combinations thereof to select the molecular components and/or combinations thereof of a genetic circuit operative in the target environment.
    Type: Application
    Filed: February 17, 2016
    Publication date: January 26, 2017
    Inventors: Zachary Z. SUN, Richard M. MURRAY, Vipul SINGHAL