Combinatorial library approach to iminocyclitols with biological activity
A method of synthesizing stereochemically defined iminocyclitol comprises replacing an intraring oxygen in a cyclic sugar by an intraring imine to form an iminocyclitol, wherein said iminocyclitol has a defined stereochemical configuration different from a stereochemical configuration of the cyclic sugar. The invention also provides combinatorial libraries of iminocyclitol compounds, allowing for diverse C1 and N-substitution. In addition, provided are methods of treating viral infections with iminocyclitols compounds.
The present application claims priority to U.S. provisional application No. 60/713,344 filed Sep. 2, 2005, which is incorporated herein by reference in its entirety.
BACKGROUNDIminocyclitols are monosaccharides with the intraring oxygen replaced by an imino group and are of considerable interest in modem glycobiology, see e.g. Legler, G. Adv. Carbohydr. Chem. Biochem. 1990, 48, 319; Winchester, B.; Fleet, G. W. J. Glycobiology 1992, 2, 199; Look, G. C.; Fotsch, C. H.; Wong, C. H. Acc. Chem. Res 1993, 26, 182; Ganem, B. Acc. Chem. Res 1996, 29, 340; Stütz, A. E. Angew. Chem. 1996, 108, 2054; Angew. Chem. Int. Ed. Engl. 1996, 35, 1926; O'Hagan, D. Nat. Prod. Rep. 1997, 14, 637; Bols, M. Acc. Chem. Res. 1998, 31, 1; Heightman, T. D.; Vasella, A. T. Angew. Chem. Int. Ed. Engl. 1999, 38, 750; Stütz, A. E. Iminosugars as Glycosidase Inhibitors: Nojirimycin and Beyond; Ed. Wiley-VCH: Weinheim, 1999, 157; Asano, N.; Nash, R. J.; Molyneux, R. J.; Fleet, G. W. J. Tetrahedron: Asymmetry 2000, 11, 1645; Pearson, M. S. M.; Mathé-Allainmat, M.; Fargeas, V.; Lebreton, J. Eur. J Org. Chem. 2005, 2159; all incorporated herein by reference in their entirety. Recently, five-membered iminocyclitols have assumed high biological significance, even eclipsing that of the better known deoxynojirimycin (DNJ) and deoxygalactojirimycin (DGJ) as selective inhibitors of glycosidase and glucotransferases, see e.g. Mehta, A.; Ouzounov, S.; Jordan, R.; Simsek, E.; Lu, X.; Moriarty, R. M.; Jacob, G.; Dwek, R. A.; Block, T. M. Antivir. Chem. Chemother. 2002, 13(5), 299; Block, T. M.; Lu, X.; Platt, F. M.; Foster, G. R.; Gerlich, W. H.; Blumberg, B. S.; Dwek, R. A. Proc. Natl. Acad. Sci. U. S. A. 1994, 91(6), 2235; Branza-Nichita, N.; Durantel, D.; Carrouée-Durantel, S.; Dwek, R. A.; Zitzmann, N. J Virol. 2001, 75(8), 3527; Durantel, D.; Branza-Nichita, N.; Carrouée-Durantel, S.; Butters, T. D.; Dwek, R. A.; Zitzmann, N. J Virol. 2001, 75(19), 8987; Mehta, A.; Conyers, B.; Tyrrell, D. L. J.; Walters, K.-A.; Tipples, G. A.; Dwek, R. A.; Block, T. M. Antimicrob. Agents and Chemother. 2002, 46(12), 4004; Lu, X.; Tran, T.; Simsek, E.; Block, T. M. J Virol. 2003, 77(22), 11933; Cook, C. S.; Karabatsos, P. J.; Schoenhard, G. L.; Karim, A. Pharmaceutical Research 1995, 12(8), 1158; all incorporated herein by reference in their entirety. Iminocyclitols are disclosed, for example, in U.S. Pat. No. 5,229,523 issued Jul. 20, 1993 to Wong et. al., in U.S. Pat. No. 5,276,120 issued Jan. 4, 1994, to Wong et. al., in U.S. Pat. No. 5,461,143 issued Oct. 24, 1995, to Wong et. al., in U.S. Pat. No. 5,596,005 issued Jan. 21, 1997, to Wong et. al., in U.S. Pat. No. 5,579,823 issued Jun. 2, 1998 to Wong et. al., in U.S. Pat. No. 6,232,450 issued May 15, 2001, to Wong, in U.S. Pat. No. 6,462,193 issued to Wong et. al. and in U.S. Pat. No. 6,774,140 issued Aug. 10, 2004, to Wong et. al. A biological activity of particular iminocyclitol compound can depend among other things on its stereochemical configuration and on substituent groups on the iminocyclitol ring. Combinatorial chemistry plays an important role in modem drug development as it allows to synthesize many different substances quickly for screening for a desired activity. It is highly desirable to apply combinatorial approach to the development of iminocyclitols with a particular biological activity. A combinatorial library of iminocyclitols was reported, for example, by Saotome et. al. in Chemistry & Biology v.8, pp. 1061-1070, 2001, and in related US patent application publication No. 2004/0147591 to Kanie and Saotome. The iminocyclitols in these publications were synthesized using a Strecker method, which is a complicated method of synthesis. A combinatorial library of iminocyclitols was also disclosed by Chapman et. al. in Journal of American Chemical Society, v. 127, pp. 506-507, 2005, however, this combinatorial library did not provide alkyl substituents on the iminogroup, which is an obligatory element for antiviral activity. Thus, it is still highly desirable to develop a facile method of synthesizing of stereochemically defined iminocyclitols that allows for a variation of a large range of substituent groups.
SUMMARYOne embodiment of the invention is a method of synthesizing stereochemically defined iminocyclitol comprising replacing an intraring oxygen in a cyclic sugar by an intraring imine to form an iminocyclitol, wherein said iminocyclitol has a defined stereochemical configuration different from a stereochemical configuration of the cyclic sugar.
Another embodiment of the present invention is a stereochemically defined iminocyclitol compound or a salt thereof, wherein said compound having a formula selected from the group consisting of
wherein
R1 is an alkyl group comprising from 1 to 20 carbon atoms, R2 is hydrogen or an alkyl group comprising from 1 to 20 carbon atoms, R3 is hydrogen or an alkyl group comprising from 1 to 20 carbon atoms, R4 is hydrogen or a first protecting group,R5 is hydrogen or a second protecting group, R6 is hydrogen or a third protecting group selected from the group consisting of methanesulfonate, tosylate and triflate; R7 is hydrogen or a fourth protective group selected from the group consisting of t-butyldimethylsiloxy and tretyl radicals, wherein the first and the second protective form together isopropylidene or cyclohexylidene or are identical protective groups selected from the group consisting of benzyl, t-butyldimethylsiloxy radical and triphenylmethyl.
Yet another embodiment is a method of treating viral infection comprising contacting a cell infected with a virus causing the infection with one or more described above iminocyclitol compounds.
BRIEF DESCRIPTION OF THE DRAWINGS
The present invention is directed to iminocyclitols with biological activity, a method of synthesizing the iminocyclitols, and, in particular, to a method of synthesizing stereochemically defined iminocyclitols from lactones.
Iminocyclitols are monosaccharides with the ring oxygen replaced by an imino group. Iminocyclitols can act as selective inhibitors and, therefore, can be used for treating metabolic disorders such as diabetes or as antiviral, antibacterial and anticancer agents. A biological activity of a particular iminocyclitol can depend among other things on its stereochemical configuration and on substituent groups on its ring.
Method.
One embodiment of the present invention is a method of synthesizing stereochemically defined iminocyclitol comprising replacing an intraring oxygen of a cyclic sugar by an intraring imine to form the iminocyclitol, wherein said iminocyclitol, wherein the iminocyclitol has a stereochemical configuration different from a stereochemical configuration of the cyclic sugar. The replacement of the intraring oxygen by the intraring imine comprises reacting the cyclic sugar with a reagent comprising NH3. The reagent for this reaction can further comprise, for example, methanol, ethanol, water, isopropyl achohol, dioxan or a mixture thereof. The replacement of the intraring oxygen by the intraring imine can be performed at temperatures ranging from 10° C. to 30° C. but most preferably at room temperature. The cyclic sugar can be, for example, an aldopentose in a 4-deoxy 1,4 furanose form, an aldohexose in a 4-deoxy 1,4 furanose form or an aldohexose in a 2,5-dideoxy pyranose form. Preferably, the cyclic is substituted at the C1 carbon position by R1 group. R1 can be, for example, an alkyl group comprising from 1 to 20 carbon atoms. Preferably, all the hydroxyl groups of the cyclic sugar are protected by protective groups with the exception of the hydroxyl group on the C1 carbon. The cyclic sugar can be formed by reacting a protected lactone compound with a Grignard reagent R1MgX, wherein X is a halide. The term “protected lactone” when used in the present application refers to a lactone having all hydroxyl groups protected by protective groups. The reaction between the protected lactone and R1 MgX can be performed, for example, in tetrahydrofurane (THF) at the temperature ranging from −75° C. to 5° C., but most preferably, from −70° C. to −60° C. The protected lactone can be formed from an unprotected lactone. The iminocyclitol formed by replacing the intraring oxygen by the intraring imine can be further transformed into a hydrogenated iminocyclitol by hydrogenating the iminocyclitol. The hydrogenation of iminocyclitol can be carried out in the presence of a catalyst. The catalyst for the hydrogenation can comprise, for example, Pd, C, acetic acid (AcOH) or a combination thereof. The hydrogenated iminocyclitol can be then turned into a N-alkyl-C-alkyl iminocyclitol. The resulting N-alkyl-C-alkyl iminocyclitol has a substituent group R2CH2 on its nitrogen atom. The formation of the N-alkyl-C-alkyl iminocyclitol can be carried out, for example, by reacting the hydrogenated iminocyclitol with an aldehyde R2CHO. This reaction can be carried in the presence of a catalyst which can comprise Pd, C, AcOH, MeOH, amberlyst catalyst or a combination thereof. The amberlyst catalyst can be, for example, Amberlyst A-21 ion exchange resin. The R2 group of the aldehyde can be, for example, a hydrogen or an alkyl group comprising 1 to 20 carbon atoms. In some embodiments, the N-alkyl-C-alkyl iminocyclitol can have some of the hydroxyl groups still being protected by protective groups. In this case, the method of the present invention can further comprise deprotecting of the protected hydroxyl groups. Deprotecting of the protected hydroxyl groups can be carried out using, for example, trifluoroacetic acid CF3COOH on a water solution.
The mechanism of the inversion of the stereochemical configuration is illustrated on
The invention as directed to a synthesis of iminocyclitol from a lactone to a 2,5-dideoxy 1,5 pyranose form is illustrated on
In some embodiments of the present invention, C2 and C3 hydroxyl groups can be protected by isopropylidene.
The method of the present invention directed to a synthesis of stereochemically defined 2,3-trans-dihydropyrrolidines is illustrated on
In some embodiments, the method of the present invention can further comprise a nucleophilic addition of a second alkyl group R3 to the C1 carbon of the iminocyclitol formed by replacing an intraring oxygen of the cyclic sugar by an intraring imine. The addition of the second alkyl to the C1 carbon of the iminocyclitol can be preceded by protecting the unprotected hydroxyl group on the iminocyclitol to form a protected iminocyclitol. The addition of the second alkyl to the C1 of the iminocyclitol can comprise reacting the protected iminocyclitol with a second Grignard reagent R3MgX, wherein R3 is an alkyl group comprising 1 to 20 carbons. Reaction between the protected iminocyclitol in D-ribitol stereochemical configuration and a second Grignard reagent R3MgX is illustrated on
One advantage of the present invention is that hydrogenating the iminocyclitol, reacting the hydrogenated iminocyclitol with an aldehyde and deprotecting C2 and C3 hydroxyl groups of the N-alkyl-C-alkyl iminocyclitol can be carried out simultaneously under catalytic hydrogenation conditions as illustrated on
The protecting groups of hydroxyl group used herein are not particularly limited, and persons skilled in the art can select adequate examples thereof. Specific examples of protecting groups of hydroxyl group are listed below, but are not limited thereto: (ether type) methyl, methoxymethyl, methylthiomethyl, benzyloxymethyl, t-butoxymethyl, 2-methoxyethoxymethyl, 2,2,2-trichloroethoxymethyl, bis(2-chloroethoxy)methyl, 2-(trimethylsilyl)ethoxymethyl, tetrahydropyranyl, 3-bromotetrahydropyranyl, tetrahydrothiopyranyl, 4-methoxytetrahydropyranyl, 4-methoxytetrahydrothiopyranyl, 4-methoxytetrahydrothiopyranyl S,S-dioxide, tetrahydrofuranyl, and tetrahydrothiofuranyl; 1-ethoxyethyl, 1-methyl-1-methoxyethyl, 1-(isopropoxy)ethyl, 2,2,2-trichloroethyl, 2-(phenylselenyl)ethyl, t-butyl, allyl, cinnamyl, p-chlorophenyl, benzyl, p-methoxybenzyl, o-nitrobenzyl, p-nitrobenzyl, p-halobenzyl, p-cyanobenzyl, 3-methyl-2-picolyl N-oxide, diphenylmethyl, 5-dibenzosuberyl, triphenylmethyl, .alpha.-naphthyldiphenylmethyl, p-methoxyphenyldiphenylmethyl, p-(p′-bromophenacyloxy)phenyldiphenylmethy-1,9-anthryl, 9-(9-phenyl)xanthenyl, 9-(9-phenyl-10-oxo)anthryl, benzisothiazolyl S,S-dioxide; and trimethylsilyl, triethylsilyl, isopropyldimethylsilyl, t-butyldimethylsilyl (TMDMS), (triphenylmethyl)dimethylsilyl, t-butyldiphenylsilyl, methyldiisopropylsilyl, methyl di-t-butylsilyl, tribenzylsilyl, tri-p-xylylsilyl, triisopropylsilyl, and triphenylsilyl; (ester type) formate, benzoylformate, acetate, chloroacetate, dichloroacetate, trichloroacetate, trifluoroacetate, methoxyacetate, triphenylmethoxyacetate, phenoxyacetate, p-chlorophenoxyacetate, 2,6-dichloro-4-methylphenoxyacetate, 2,6-dichloro-4-(1,1,3,3-tetramethylb- utyl)phenoxyacetate, 2,4-bis(1,1-dimethylpropyl)phenoxyacetate, chlorodiphenylacetate, p-P-phenylacetate, 3-phenylpropionate, 3-benzoylpropionate, isobutyrate, monosuccinoate, 4-oxopentanoate, pivaloate, adamantoate, crotonate, 4-methoxycrotonate, (E)-2-methyl-2-butenoate, benzoate, o-(dibromomethyl)benzoate, o-(methoxycarbonyl)benzoate, p-phenylbenzoate, 2,4,6-trimethylbenzoate, p-P-benzoate, and .alpha.-naphthoate; (carbonate type) methyl carbonate, ethyl carbonate, 2,2,2-trichloroethyl carbonate, isobutyl carbonate, vinyl carbonate, allyl carbonate, cinnamyl carbonate, p-nitrophenyl carbonate, benzyl carbonate, p-methoxybenzyl carbonate, 3,4-dimethoxybenzyl carbonate, o-nitrobenzyl carbonate, p-nitrobenzyl carbonate, and S-benzyl thiocarbonate; an(others) N-phenylcarbamate, N-imidazolylcarbamate, borate, nitrate, N,N,N′,N′-tetramethylphosphorodiamidate, and 2,4-dinitrophenyl-sulfenate.
Methods for introducing or deprotecting the aforementioned protecting groups are known to persons skilled in the art and are described in, for example, Teodora, W. Green, Protective Groups in Organic Synthesis, John Wiley & Sons, Inc. (1981).
The method of the present invention can be also used for synthesis of iminocyclitols with a substituent on the C1 carbon atom. The substituent can be, for example, aryl or heteroaryl. The C1 aryl compounds are powerful inhibitors for the nonspecific nucleoside N-ribohydrolases, see e.g. a) Horenstein, B. A; Zabinski, R. F.; Schramm, V. L. Tetrahedron Lett. 1993, 34, 7213; b) Furneaux, R. H.; Limberg, G.; Tyler, P. C.; Schramm, V. L. Tetrahedron 1997, 53, 2915, both incorporated herein by reference in their entirety. The C1 nucleosides are called immucillins and are important purine nucleoside phosphorylase (PNP) inhibitors, see e.g.a) Evans, G. B.; Furneaux, R. H.; Gainsford, G. J.; Schramm, V. L.; Tyler, P. C. Tetrahedron 2000, 56, 3053; b) Evans, G. B.; Furneaux, R. H.; Hutchison, T. L.; Kezar, H. S.; Morris, P. E. Jr.; Schramm, V. L.; Tyler, P. C. J. Org. Chem. 2001, 66, 5723; c) Ting, L.-M.; Shi, W.; Lewandowicz, A.; Singh, V.; Mwakingwe, A.; Birck, Ma. R.; Ringia, E. A. T.; Bench, G.; Madrid, D. C.; Tyler, P. C.; Evans, G. B.; Furneaux, R. H.; Schramm, V. L.; Kim, K. J. Biol. Chem. 2005, 280(10), 9547, all incorporated herein by reference in their entirety. C1 substituted iminocyclitols are usually synthesized from 5-O-TBDMS-1-N-dehydro-1,4-imino-2,3-O-isopropylidene-D-ribitol, which is formed by dehydrochlorination of the N-chloroamine, and subsequent nucleophilic addition of lithium alkyls, aryls and heteroaryls, see e.g. Chapman, T. M.; Davies, I. G.; Gu, B.; Block, T. M.; Scopes, D. I. C.; Hay. P. A.; Courtney, S. M.; McNeill, L. A.; Schofield, C. J.; Davis, B. G. J. Am. Chem. Soc. 2005, 127, 506, incorporated herein by reference in its entirety. In the method of the present invention, the C1 substituent is installed at an earlier stage and the troublesome dimerization and trimerization of C1 unsubstituted 1-N-pyrrolidines as starting materials is avoided, see e.g. Han, B.; Rajwanshi, V.; Nandy, J.; Krishnamurthy, R.; Eschenmoser, A. Synlett 2005, 5, 744, incorporated herein by reference in its entirety.
Iminocyclitol Libraries
The present invention also provides combinatorial libraries of stereochemically defined iminocyclitol compounds and the individual iminocyclitol compounds having a formula selected from the group consisting of
- R1 is an alkyl group comprising from 1 to 20 carbon atoms or from 1 to 10 carbon atoms,
- R2 is hydrogen or an alkyl group comprising from 1 to 20 carbon atoms or from 1 to 10 carbon atoms,
- R3 is hydrogen or an alkyl group comprising from 1 to 20 carbon atoms or from 1 to 10 carbon atoms,
- R4 is hydrogen or a first protecting group,
- R5 is hydrogen or a second protecting group,
- R6 is hydrogen or a third protecting group selected from the group consisting of methanesulfonate, tosylate and triflate.
- R7 is hydrogen or a fourth protective group selected from the group consisting of t-butyldimethylsiloxy and trityl radicals, wherein the first and the second protective form together isopropylidene, cyclohexylidene or are identical protective groups selected from the group consisting of benzyl, t-butyldimethylsiloxy radical and triphenylmethyl radical. In some embodiments, a stereochemical configuration of the iminocyclitol compound can be, but not limited to,
The present invention also provides an inhibitor sugar chain related enzymes comprising one or more of the above iminocyclitol compounds or a salt thereof. The present invention also provides a medicine or a pharmaceutical product comprising one or more of the above iminocyclitols or a salt thereof.
The medicine of the present invention is useful for treating or preventing diseases associated with sugar chain related enzymes. For example, it can be used as an antiviral agent, an anticancer agent, or an immunostimulant agent.
When the compound of the present invention is used as an inhibitor of sugar chain related enzymes, examples of target sugar chain related enzymes include glycolytic enzymes (such as glycohydrolase) and glycosyltransferase.
When the medicine of the present invention is used as an antiviral agent, the type of the target viral disease is not particularly limited. Diseases caused by virus infections include, for example, Japanese encephalitis, dengue fever, measles, epidemic parotitis, epidemic roseola, influenza, hepatitis A, hepatitis B, hepatitis C, yellow fever, hemorrhagic fever, meningitis, infantile diarrhea, rabies, Ebola hemorrhagic fever, Lassa fever, polio, St. Louis encephalitis, adult T cell leukemia, and AIDS. Examples of known intractable diseases that are deduced to be caused by virus infections include chronic rheumatism, systemic erythematodes, multiple sclerosis, subacute sclerosing panencephalitis, Alzheimer's disease, ulcerative colitis, Crohn's disease, Kawasaki disease, and diabetes. The antiviral agent of the present invention is useful for treating or preventing these diseases.
When the medicine of the present invention is used as an anticancer agent, a type of target tumor or cancer is not particularly limited. Examples thereof include all malignant and benign tumors, and includes carcinomas (epithelial malignant tumors), sarcomas (non-epithelial malignant tumors), and mixed types thereof.
The type of cancer can be classified based on the site that it developed in Specific examples of cancers include hypophyseal adenoma, neuroglioma, acoustic neuroma, brain tumor, pharyngeal cancer, laryngeal cancer, thymoma, mesothelioma, breast cancer, lung cancer, gastric cancer, esophageal cancer, colon cancer, hepatocellular cancer, pancreatic cancer, pancreatic endocrine tumor, cholangiocarcinoma, gallbladder cancer, penile cancer, ureteral cancer, renal cell carcinoma, orchioncus (testicular tumor), prostate cancer, bladder cancer, vulvar cancer, uterine cancer, uterine sarcoma, vaginal cancer, ovarian cancer, ovarian germ cell tumor, malignant melanoma, mycosis ftungoides, skin cancer, soft part sarcoma, malignant lymphoma, non Hodgkin's lymphoma, myelodysplastic syndromes, multiple myeloma, plasma cell tumor, and brown lymphoma. The aforementioned examples represent examples of the cancers, and the cancers are not limited thereto.
The medicine of the present invention can be administered orally or parenterally (such as intravenous, intramuscular, hypodermic, or endodermic injection, intrarectal administration, or transmucosal administration). Examples of pharmaceutical compositions that are suitable for oral administration include tablets, granules, capsules, powders, solutions, suspensions, and syrups. Examples of pharmaceutical compositions that are suitable for parenteral administration include injections, drops, suppositories, and transdermal absorbents. The dosage forms of the medicine of the present invention are not limited thereto.
Types of the pharmaceutical additives that are used for producing the medicine of the present invention are not particularly limited, and persons skilled in the art can select adequate one. Examples of the pharmaceutical additives that can be used include excipients, disintegrators or disintegration assistants, binders, lubricants, coating agents, bases, solubilizers or solubilization assistants, dispersants, suspensions, emulsifiers, buffers, antioxidants, preservatives, isotonizing agents, pH regulators, solubilizers, and stabilizers. The specific ingredients of the pharmaceutical additives used for these purposes are well known to persons skilled in the art.
Examples of pharmaceutical additives that can be used for producing preparations for oral administration include: excipients such as glucose, lactose, D-mannitol, starch, or crystalline cellulose; disintegrators or disintegration assistants such as carboxymethyl cellulose, starch, or carboxy methylcellulose calcium; binders such as hydroxypropyl cellulose, hydroxypropyl methylcellulose, polyvinylpyrrolidone, or gelatin; lubricants such as magnesium stearate or talc; coating agents such as hydroxypropyl methylcellulose, sucrose, polyethylene glycol, or titanium oxide; and bases such as vaseline, liquid paraffin, polyethylene glycol, gelatin, kaolin, glycerin, purified water, or hard fat.
Examples of pharmaceutical additives that can be used for producing injection or drop preparations include: solubilizers or solubilization assistants that can constitute aqueous injections or injections to be dissolved before use, such as distilled water for injection, physiological saline, or propylene glycol; isotonizing agents such as glucose, sodium chloride, D-mannitol, or glycerin; and pH regulators such as inorganic acids, organic acids, inorganic bases, or organic bases.
The medicine of the present invention can be administered to mammal, including humans.
Applicability
The present invention provides novel iminocyclitol compounds. The iminocyclitol compounds of the present invention can be useful, for example, as a specific inhibitor of sugar chain related enzymes such as glycosyltransferase and glycosidase. The iminocyclitol compounds of the present invention can be useful, for example, as medicine for treating or preventing diseases associated with sugar chain related enzymes, and more specifically, they can e useful as antiviral agents, anticancer agents or as immunostimulant agents. Using combinatorial libraries of the present invention, novel enzyme inhibitors can be discovered. Iminocyclitol compounds of the present invention with defined stereochemical configuration can imitate different sugar through conformational changes, i.e. iminocyclitols of the present invention can select a more adequate conformation for an enzyme given by the induced fit. Therefore, compounds of the present invention provided as a combinatorial library can be useful for developing new pharmaceuticals.
The present invention also provides a method of treating a viral infection comprising contacting a cell infected with a virus causing the infection with one or more of the above disclosed iminocyclitols compounds. The virus can be for example a hepatitis virus, such as hepatitis C virus, hepatitis B virus or bovine viral diarrhea virus. The contacting of the cell can comprise administering the one or more iminocyclitols compounds to a subject such as mammal including human.
The following examples illustrate the present invention. However, it should be understood that the present invention is not limited thereto.
In the Examples 1-4, melting points were determined using a Fisher Johns apparatus and are uncorrected. 1H nuclear magnetic resonance (NMR) spectra were determined with Bruker 400 spectrometer at 400 MHz. 13C NMR spectra were recorded with a Bruker 400 spectrometer at 75 MHz.
Step 1: Synthesis of 5-O-Methanesulfonyl-2,3-O-isopropylidene-L-lyxonolactone2,3-O-Isopropylidene-L-lyxono-1,4-lactone (a gift from United Therapeutic Corporation, 5 g, 26.6 mmol) was dissolved in pyridine (8 ml) and methanesulfonylchloride (2 ml, 29.2 mmol, 1.1 eq) was added to a stirred at 0° C. over 10 min. The mixture was kept at 0° C. for 1 h. 0.5 ml water was then added and the mixture was extracted with methylene chloride (15 ml). The extract was washed with HCl 10% (2×5 ml) and with aqueous NaHCO3 (5 ml). The organic phase was dried (MgSO4), filtered and evaporated under reduced pressure to yield 5-O-methanesulfonyl-2,3-O-isopropylidene-L-lyxonolactone (90%) as colorless crystals, m.p. 129-131° C. (lit mp 133-133.5° C., 79%).
- 1H—nuclear magnetic resonance spectrum (1H NMR) (400 MHz, CDCl3) δ 4.89 (d, 2H, H-2, H-3), 4.79 (m, 1H, H-4), 4.56 (dd, J5′,5=11.7 Hz, J5′,4=4.1 Hz, 1H, H-5′), 4.48 (dd, J5,5′=11.7 Hz, J5,4=7.6 Hz, 1H, H-5), 3.11 (s, 3H, CH3SO2), 1.49 and 1.40 (2s, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ 172.9 (CO), 115.1 (C-6), 76.4 (C-2), 76.0 (C-4), 75.6 (C-3), 67.1 (C-5), 37.9 (CH3SO2), 26.9 and 25.9 (2CH3).
- For details of this procedure, see also Godskesen M.; Lundt I.; Madsen R.; Winchester B. Bioorg. Med. Chem. 1996, 4, 1857, incorporated herein by reference in its entirety.
5-O-Methanesulfonyl-2,3-O-isopropylidene-L-lyxono-1,4-lactone (5 g, 18 mmol) was dissolved in tetrahydrofuran (THF) (125 ml) anhydrous under Ar. The solution was cooled to −68° C., maintaining the temperature between ˜50° C. ˜−40° C., the Grignard reagent (1.5 eq) was added with stirred over 20 min. The temperature was allowed to warm to 0° C. and the solution was stirred 1 h. After quenching with saturated aqueous NH4Cl, the mixture was extracted with ethyl acetate (2×15 ml). The combined extracts were washed with saturated aqueous NH4Cl, dried over Na2SO4, and filtered. Evaporation of the filtrate under vacuo afforded 1-R1-5-O-methanesulfonyl-2,3-O-isopropylidene-L-lyxoses as a stereoisomer mixture at the anomeric carbon atom.
- 1-Methyl-5-O-methanesulfonyl-2,3-O-isopropylidene-L-lyxose, (93%) colorless crystals, m.p. 113-115° C. Ratio of isomers α:β˜19:81. C10H18O7S, M=282.31: MS m/z 305.1 (M+Na). 1H-NMR (400 MHz, CDCl3) δ β: 4.83 (dd, J3,2=5.8 Hz, J3,4=3.7 Hz, 1H, H-3), 4.51 (dd, J5,5=10.0 Hz, J5′,4=2.9 Hz, 1H, H-5), 4.48 (d, J2,3=5.8 Hz, 1H, H-2), 4.41-4.32 (m, 2H, H-4 and H-5), 3.06 (s, 3H, CH3SO2), 1.54 (s, 3H, CH3), 1.47 and 1.31 (2s, 6H, 2CH3); α: 4.78 (dd, J3,2=6.1 Hz, J3,4=3.9 Hz, 1H, H-3), 4.52-4.45 (m, 1H, H-5′), 4.40-4.32 (m, 1H, H-2), 4.41-4.32 (m, 1H, H-5), 3.92 (m, 1H, H-4), 3.07 (s, 3H, CH3SO2), 1.54 and 1.36 (2s, 6H, 2CH3), 1.41 (s, 3H, CH3); 13C-NMR (75 MHz, CDCl3) δ β: 112.9 (C-6), 107.3 (C-1), 85.2 (C-2), 80.4 (C-3), 76.7 (C-4), 68.1 (C-5), 37.5 (CH3), 26.0 and 25.7 (2CH3), 22.4 (CH3).
- 1-Butyl-5-O-methanesulfonyl-2,3-O-isopropylidene-L-lyxose, (92%) colorless crystals, m.p. 54-55° C. Ratio of isomers α:β˜23:77. C13H24O7S, M=324.4. 1H-NMR (400 MHz, CDCl3) δ β: 4.83 (dd, J3,2=5.8 Hz, J3,4=3.8 Hz, 1H, H-3), 4.53-4.32 (m, 4H, H-2, H-4, H-5′, H-5), 3.06 (s, 3H, CH3SO2), 1.46 and 1.30 (2s, 6H, 2CH3), 1.45-1.34 (m, 4H, CH2), 1.88-1.68 (m, 2H, CH2), 0.91 (m, 3H, CH3); α: 4.77 (dd, J3,2=5.9 Hz, J3,4=4.1 Hz, 1H, H-3), 4.53-4.32 (m, 3H, H-2, H-5′, H-5), 3.93 (m, 1H, H-4), 3.07 (s, 3H, CH3SO2), 1.54 and 1.36 (2s, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ β: 112.9 (C-6), 107.3 (C-1), 84.6 (C-2), 80.1 (C-3), 76.4 (C-4), 68.4 (C-5), 37.5 (CH3SO2), 34.9, 24.8, 22.9 (3CH2), 26.0 and 25.4 (2CH3), 14.0 (CH3); α: 113.8 (C-6), 104.8 (C-1), 79.7 (C-3), 73.9 (C-4), 68.4 (C-5), 37.6 (CH3SO2), 25.8 and 24.6 (2CH3), 13.8 (CH3).
- 1-Octyl-5-O-methanesulfonyl-2,3-O-isopropylidene-L-lyxose, (90%) colorless oil. Ratio of isomers α:β˜20:80. C17H32O7S, M=380.5. 1H-NMR (400 MHz, CDCl3) δ β: 4.82 (dd, J3,2=5.9 Hz, J3,4=3.6 Hz, 1H, H-3), 4.51 (dd, J5′,5=8.6 Hz, J5′,4=1.7 Hz, 1H, H-5′), 4.45 (d, J2,3=5.9 Hz, 1H, H-2), 4.39-4.27 (m, 2H, H-4, H-5), 3.06 (s, 3H, CH3SO2), 1.45 and 1.30 (2s, 6H, 2CH3), 1.45-1.24 (m, 12H, CH2), 1.88-1.68 (m, 2H, CH2), 0.88 (tl, 3H, CH3); α: 4.77 (dd, J3,2=6.0 Hz, J3,4=3.9 Hz, H-3), 4.50-4.43 (m, H-5′), 4.39-4.27 (m. 2H, H-2, H-5), 3.93 (m, 1H, H-4), 3.07 (s, 3H, CH3SO2), 1.54 and 1.36 (2s, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ β: 113.0 (C-6), 107.4 (C-1), 84.7 (C-2), 80.3 (C-3), 76.5 (C-4), 68.7 (C-5), 37.6 (CH3SO2), 35.3, 32.0, 30.1, 29.6, 29.4, 23.4, 22.8 (7CH2), 26.2 and 25.9 (2CH3), 14.3 (CH3); α: 113.8 (C-6), 104.8 (C-1), 79.8 (C-3), 74.0 (C-4), 68.4 (C-5), 37.6 (CH3SO2), 25.8 and 24.6 (2CH3), 14.1 (CH3).
- 1-Nonyl-5-O-methanesulfonyl-2,3-O-isopropylidene-L-lyxose, (94%) colorless oil. Ratio of isomers α:β˜22:78. C18H34O7S, M=394.53. 1H-NMR (400 MHz, CDCl3) δ β: 4.82 (dd, J3,2=5.8 Hz, J3,4=3.4 Hz, 1H, H-3), 4.49 (dd, J5′,5=8.3 Hz, J5′,4=1.5 Hz, 1H, H-5′), 4.47 (d, J2,3=5.8 Hz, 1H, H-2), 4.40-4.33 (m, 2H, H-4, H-5), 3.06 (s, 3H, CH3SO2), 1.88-1.68 (m, 2H, CH2), 1.45 and 1.30 (2s, 6H, 2CH3), 1.45-1.24 (m, 14H, CH2), 0.88 (tl, 3H, CH3); α: 4.78 (dd, J3,2=6.0 Hz, J3,4=3.9 Hz, H-3), 4.52-4.43 (m, H-5′), 4.40-4.33 (m. 2H, H-2, H-5), 3.93 (m, 1H, H-4), 3.07 (s, 3H, CH3SO2), 1.54 and 1.36 (2s, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ β: 112.8 (C-6), 107.2 (C-1), 84.5 (C-2), 80.1 (C-3), 76.3 (C-4), 68.4 (C-5), 37.4 (CH3SO2), 35.1, 31.8, 29.7, 29.5, 29.4, 29.3, 23.2, 22.6 (8CH2), 25.9 and 25.8 (2CH3), 14.1 (CH3); α: 113.6 (C-6), 104.6 (C-1), 79.7 (C-3), 73.8 (C-4), 68.2 (C-5), 37.5 (CH3SO2), 25.8 and 24.6 (2CH3), 14.1 (CH3).
1-R-5-O-Methanesulfonyl-2,3-O-isopropylidene-L-lyxose (14 mmol) was dissolved in NH3/EtOH 3:1 (50 ml). The solution was allowed to stand 2 days at room temperature in a sealed flask. The solvent was removed under reduced pressure, and the residue was dissolved in methanol (5 ml) and dried over Na2SO4, and filtered. Evaporation of the filtrate under vacuo afforded the crude product which was purified by silica gel column chromatography, eluting with ethyl acetate, to afford ((2S, 3R, 4R)-1-R1-2,3-isopropylidenedioxy-4-hydroxymethyl-1 -pyrrolines as colorless crystalline products.
- ((2S, 3R, 4R)-1-Methyl-2,3-isopropylidenedioxy-4-hydroxymethyl-1-pyrroline), colorless crystals, mp 104-5° C. (44 %). C9H15NO3, M=185.22: MS m/z 186.2 (M+H). 1H-NMR (400 MHz, CDCl3) δ 4.9 (d, J2,3=5.5 Hz, 1H, H-2), 4.6 (d, J3,2=5.5 Hz, 1H, H-3), 4.16 (bs, 1H, H-4), 3.87 (dd, J5′,5=11.6 Hz, J5′,4=3.3 Hz, 1H, H-5′), 3.77 (dd, J5′,5=11.6 Hz, J5,4=3.4 Hz, 1H, H-5), 2.09 (d, J1,CH3=0.8 Hz, 3H, CH3), 1.36 and 1.35 (2s, 6H, 2CH3). 13C-NMR (75 MHz, CDCl3) δ 176.0 (C═N), 111.7 (C-6), 87.2 (C-2), 80.7 (C-3), 77.9 (C-4), 62.2 (C-5), 25.7 (2CH3), 16.9 (CH3).
- ((2S, 3R, 4R)-1-Butyl-2,3-isopropylidenedioxy-4-hydroxymethyl-1-pyrroline), colorless crystals, mp 114-5° C. (54 %). C12H21NO3, M=227.3: MS m/z 228.3 (M+H); calcd for C12H21NO3 (M+H)+ 228.1600. found 228.1606. 1H-NMR (400 MHz, CDCl3) δ 4.94 (d, J2,3=5.5 Hz, 1H, H-2), 4.58 (d, J3,2=5.5 Hz, 1H, H-3), 4.21 (bs, 1H, H-4), 3.88 (dd, J5′,5=11.4 Hz, J5′,4=3.3 Hz, 1H, H-5′), 3.79 (dd, J5′,5=11.4 Hz, J5,4=3.4 Hz, 1H, H-5), 2.49-2.42 (m, 2H, CH2), 1.68-1.59 (m, 2H, CH2), 1.41-1.30 (m, 2H, CH2), 1.37 and 1.36 (2s, 6H, 2CH3), 0.93 (t, J=7.4 Hz, 3H, CH3). 13C-NMR (75 MHz, CDCl3) δ 179.1 (C═N), 111.6 (C-6), 86.4 (C-2), 80.4 (C-3), 77.4 (C-4), 62.8 (C-5), 30.8, 28.1, 22.6 (3CH2), 26.8 and 25.6 (2CH3), 13.8 (CH3).
- ((2S, 3R, 4R)-1-Octyl-2,3-isopropylidenedioxy-4-hydroxymethyl-1-pyrroline), colorless crystals, mp 105-6° C. (35 %). C16H29NO3, M=283.21: MS m/z 284.3 (M+H); calcd for C16H29NO3 (M+H)+284.2226, found 284.2227. 1H-NMR (400 MHz, CDCl3) δ 4.94 (d, J2,3=5.6 Hz, 1H, H-2), 4.58 (d, J3,2=5.6 Hz, 1H, H-3), 4.21 (bs, 1H, H-4), 3.88 (dd, J5′5,=11.4Hz, J5′,4=3.3 Hz, 1H, H-5′), 3.78 (dd, J5′,5=11.4Hz, J5,4=3.4 Hz, 1H, H-5), 2.47-2.41 (m, 2H, CH2), 1.69-1.59 (m, 2H, CH2), 1.36-1.26 (m, 10 H, CH2), 1.36 and 1.35 (2s, 6H, 2CH3), 0.87 (t, J=7.0 Hz, 3H, CH3). 13C-NMR (75 MHz, CDCl3) δ 179.4 (C═N), 111.8 (C-6), 86.6 (C-2), 80.7 (C-3), 77.8 (C-4), 63.0 (C-5), 32.0, 31.4, 29.7, 29.5, 29.4, 27.0, 22.8 (7CH2), 26.8 and 25.6 (2CH3), 14.3 (CH3).
- ((2S, 3R, 4R)-1-Nonyl-2,3-isopropylidenedioxy-4-hydroxymethyl-1-pyrroline), colorless crystals, mp 89-90° C. (39 %). C17H31NO3, M=297.24: MS m/z 298.3 (M+H); calcd for C17H31NO3 (M+H)+298.2382, found 298.2379. 1H-NMR (400 MHz, CDCl3) δ 4.95 (d, J2,3=5.5 Hz, 1H, H-2), 4.58 (d, J3,2=5.5 Hz, 1H, H-3), 4.21 (bs, 1H, H-4), 3.88 (dd, J5′,5=11.3 Hz, J5′,4=3.3 Hz, 1H, H-5′), 3.78 (dd, J5′,5=11.3 Hz, J5,4=3.4 Hz, 1H, H-5), 2.48-2.42 (m, 2H, CH2), 1.69-1.61 (m, 2H, CH2), 1.36-1.26 (m, 12H, CH2), 1.36 and 1.35 (2s, 6H, 2CH3), 0.88 (t, J=7.0 Hz, 3H, CH3). 13C-NMR (75 MHz, CDCl3) δ 179.5 (C═N), 111.8 (C-6), 86.6 (C-2), 80.7 (C-3), 77.8 (C-4), 63.0 (C-5), 32.1, 31.4, 29.8, 29.6, 29.5, 27.1, 22.9 (8CH2), 26.3 and 25.8 (2CH3), 14.3 (CH3).
((2S, 3R, 4R)-1-R1-2,3-Isopropylidenedioxy-4-hydroxymethyl-1-pyrroline (2.5 mmol) in acetic acid (8 ml) was shaken overnight under hydrogen in the presence of 10% palladium-carbon (300 mg) using 50 psi pressures. Thin layer chromatography (TLC) (ethyl acetate: methanol, 4:1) showed complete reactions. The catalyst was removed by filtration through a celite pad and rinsed with acetic acid. Concentration in vacuo and purification of the residue by column chromatography (silica gel, elute with ethyl acetate:methanol, 4:1) afforded ((1R, 2S, 3R, 4R)-1-R1-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt as colorless crystalline products. A sample of ((1R, 2S, 3R, 4R)-1-methyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt was dissolved in aqueous methanol (1:1) and treated with Amberlyst A 21 base resin until the solution had pH 7. The solvent was removed under reduced pressure afforded ((1R, 2S, 3R, 4R)-1-methyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine.
- ((1R, 2S, 3R, 4R)-1-Methyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt), colorless crystals, mp 93-4° C. (87 %). C11H21NO5, M=247.12; For C9H17NO3: MS m/z 188.1 (M+H−); Calcd for C9H17NO3 (M+H)+188.1287, found 188.1284. 1H-NMR (400 MHz, CDCl3) δ 5.29 (bs, NH), 4.57-4.52 (m, 2H, H-2, H-3), 3.66 (dd, J5′,5=10.8 Hz, J5′,4=4.0 Hz,1H, H-5′), 3.44-3.33 (m, 3H, H-5, H-4, H-1), 1.99 (s, 3H, CH3COO−), 1.49 and 1.32 (2s, 6H, 2CH3), 1.26 (d, J=6.7 Hz, 3H, CH3). 13C-NMR (75 MHz, CDCl3) δ 178.6 (CH3COO−), 111.5 (C-6), 83.9 (C-3), 82.7 (C-2), 66.1 (C-4), 60.4 (C-5), 56.6 (C-1), 26.3 and 24.2 (2CH3), 13.3 (CH3).
- ((1R, 2S, 3R, 4R)-1-Methyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine), C9H17NO3, M=187.24. 1H-NMR (400 MHz, CDCl3) δ 4.49 (dd, J2,3=5.4 Hz, J2,1=4.1 Hz, 1H, H-2), 4.38 (d, J3,2=5.4 Hz, 1H, H-3), 3.50 (dd, J5′,5=8.9 Hz, J5′,4=4.0 Hz,1H, H-5′), 3.31-3.22 (m, 2H, H-5, H-4), 3.08 (m, 1H, H-1), 2.64 (bs, NH), 1.48 and 1.31 (2s, 6H, 2CH3), 1.22 (d, J=6.6 Hz, 3H, CH3). 13C-NMR (75 MHz, CDCl3) δ 84.3 (C-3), 83.5 (C-2), 65.9 (C-4), 59.9 (C-5), 55.8 (C-1), 26.4 and 24.2 (2CH3), 13.6 (CH3).
- 1H-NMR (400 MHz, C6D6) δ 3.92-3.88 (m, 2H, H-2, H-3), 3.29 (dd, J5′,5=10.3 Hz, J5′,4=5.7 Hz,1H, H-5′), 3.18 (dd, J4,5=10.3 Hz, J4,5′=5.7 Hz,1H, H-4), 3.18 (t, J5,5′=10.3 Hz, J5,4′=10.3 Hz,1H, H-4), 2.63 (m, 1H, H-1), 2.35 (bs, NH), 1.35 and 1.13 (2s, 6H, 2CH3), 1.06 (d, 3H, J=6.5 Hz, CH3); 13C-NMR (75 MHz, C6D6) δ 84.6 (C-3), 83.8 (C-2), 66.7 (C-4), 60.2 (C-5), 56.0 (C-1), 26.7 and 24.4 (2CH3), 13.9 (CH3).
- ((1R, 2S, 3R, 4R)-1-Butyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt), colorless crystals, mp 119-120° (90%). C14H27NO5, M=289.2; For C12H23NO3: MS m/z 230.2 (M+H). 1H-NMR (400 MHz, CDCl3) δ 6.88 (bs, NH), 4.58 (dd, J2,3=5.5, Hz, J2,1=4.1 Hz, 1H, H-2), 4.48 (d, J3,2=5.5, Hz,1H, H-3), 3.81 (dd, J5′,5=12.0 Hz, J5′,4=4.0 Hz, 1H, H-5′), 3.52 (dd, J5′,5=12.0 Hz, J5,4=6.5 Hz, 1H, H-5), 3.47-3.42 (m, 2H, H-4, H-1), 1.99 (s, 3H, CH3COO−), 1.74-1.65 (m, 2H, CH2), 1.45-1.34 (m, 4H, 2CH2), 1.50 and 1.32 (2s, 6H, 2CH3), 0.91 (t, J=7.2 Hz, 3H, CH3). 13C-NMR (75 MHz, CDCl3) δ 178.6 (CH3COO−), 111.7 (C-6), 83.0 (C-3), 81.2 (C-2), 66.0 (C-4), 61.9 (C-5), 60.4 (C-1), 28.9, 27.9, 22.8 (3CH2), 26.4 and 24.3 (2CH3), 23.7 (CH3COO31), 14.1 (CH3).
- ((1R, 2S, 3R, 4R)-1-Octyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt), colorless crystals, mp 95-96° C. (90 %). C18H35NO5, M=345.43; For C16H31NO3: MS m/z 286.1 (M+H). 1H-NMR (400 MHz, CDCl3) δ 5.49 (bs, NH), 4.59 (dd, J2,3=5.5 Hz, J2,1=4.1 Hz, 1H, H-2), 4.55 (d, J3,2=5.5 Hz, 1H, H-3), 3.68 (dd, J5′,5=11.5 Hz, J5′,4=4.6 Hz, 1H, H-5′), 3.45 (dd, J5,5′=11.5 Hz, J5,4=7.5 Hz, 1H, H-5), 3.37 (dd, J4,5=7.5 Hz, J4,5′=4.6 Hz, 1H, H-4), 3.24 (m, 1H, H-1), 1.97 (s, 3H, CH3COO31), 1.69-1.58 (m, 2H, CH2), 1.48-1.27 (m, 12H, 6CH2), 1.48 and 1.31 (2s, 6H, 2CH3), 0.88 (t, J=7.0 Hz, 3H, CH3). 13C-NMR (75 MHz, CDCl3) δ 179.1 (CH3COO31), 111.3 (C-6), 83.2 (C-3), 81.4 (C-2), 65.8 (C-4), 61.5 (C-5), 60.3 (C-1), 31.9, 29.8, 29.5, 29.3, 28.4, 26.9, 22.7 (7CH2), 26.2 and 24.1 (2CH3), 14.2 (CH3), -5.3 (2CH3).
- ((1R, 2S, 3R, 4R)-1-Nonyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt), colorless crystals, mp 87-88° C. (87 %). C19H37NO5, M=359.45; For C17H33NO3: MS m/z 300.3 (M+H). 1H-NMR (400 MHz, CDCl3) δ 5.39 (bs, NH), 4.57 (dd, J2,3=5.3 Hz, J2,1=4.1 Hz, 1H, H-2), 4.45 (d, J3,2=5.3 Hz, 1H, H-3), 3.64 (dd, J5′,5=11.2 Hz, J5′,4=4.7 Hz, 1H, H-5′), 3.41 (dd, J5,5′=11.2 Hz, J5,4=7.8 Hz, 1H, H-5), 3.33 (dd, J4,5=7.8 Hz, J4,5′=4.7 Hz, 1H, H-4), 3.18 (m, 1H, H-1), 1.97 (s, 3H, CH3COO31), 1.62 (m, 2H, CH2), 1.47-1.27 (m, 14H, 7CH2), 1.48 and 1.31 (2s, 6H, 2CH3), 0.88 (t, J=7.0 Hz, 3H, CH3); 13C-NMR (75 MHz, CDCl3 3) δ 178.9 (CH3COO31), 111.2 (C-6), 83.3 (C-3), 81.6 (C-2), 65.8 (C-4), 61.4 (C-1), 60.3 (C-5), 31.9, 29.8, 29.6, 29.5, 29.4, 28.5, 26.9, 22.7 (8CH2), 26.2 and 24.1 (2CH3), 14.2 (CH3).
((1R, 2S, 3R, 4R)-1-R1-2,3-Isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt (2 mmol) were treated with nonyl aldehide (4 mmol, 2 eq) and a catalytic amount of acetic acid in methanol (4 ml) at room temperature (RT) for 1 h under Ar. Then 10% palladium-carbon (200 mg) was added and the reaction mixture was shaken under hydrogen (45 psi). Over night TLC (ethyl acetate) showed complete reactions. The catalyst was removed by filtration through a celite pad and the solvent removed under reduced pressure. The residue was purification by column chromatography (silica gel, elute with ethyl acetate).
- ((1R, 2S, 3R, 4R)-N-Nonyl-1-methyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt), as an oil (89 %). C20H39NO5, M=373.27: MS m/z 314.3 (M+H). 1H-NMR (400 MHz, CDCl3) δ 4.65 (dd, J3,2=6.9 Hz, J3,4=2.0 Hz, 1H, H-3), 4.56 (t, J2,3=6.9 Hz, 1H, H-2), 3.72 (dd, J5′,5=11.4 Hz, J5′,4=4.0 Hz,1H, H-5′), 3.59 (dd, J5,5′=11.4 Hz, J5,4=3.6 Hz,1H, H-5), 3.51 (m, 1H, H-1), 3.13 (bs, 1H, H-4), 2.70-2.58 (m, 2H, CH2), 1.49 and 1.33 (2s, 6H, 2CH3), 1.36-1.28 (m, 14H), 1.10 (d, J=6.8 Hz, 3H, CH3), 0.87 (bt, 3H, CH3); 13C-NMR (75 MHz, CDCl3) δ 112.5 (C-6), 82.5 (C-3), 80.8 (C-2), 67.2 (C-4), 59.4 (C-5), 58.7 (C-1), 47.2 (CH2), 32.0, 29.8, 29.7, 29.6, 29.4, 28.1, 27.5, 22.8 (CH2), 26.0 and 24.6 (2CH3), 14.3 (CH2CH3), 10.3 (CH3).
- ((1R, 2S, 3R, 4R)-N-Nonyl-1-buthyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt), as an oil (85 %). C23H45NO5, M=415.56: MS m/z 356.3 (M+H). 1H-NMR (400 MHz, CDCl3) δ 4.63 (dd, J2,3=6.3 Hz, J2,1=4.5 Hz, 1H, H-2), 4.56 (d, J3,2=6.3 Hz, 1H, H-3), 3.74-3.66 (m, 1H, H-5′), 3.47 (dd, J5,5′=11.3 Hz, J5,4=6.3 Hz,1H, H-5), 3.40 (bt, 1H, H-4), 3.31 (m, 1H, H-1), 2.81 (bt, 2H, CH2), 1.73-−1.20 (m, 20H), 1.98 (s, 3H, CH3COO31), 1.49 and 1.31 (2s, 6H, 2CH3), 0.93 (t, J=6.9 Hz, 3H, CH3), 0.87 (t, J=6.5 Hz, 3H, CH3); 13C-NMR (75 MHz, CDCl3) δ 179.4 (CH3COO31 ), 111.6 (C-6), 82.4 (C-2), 81.2 (C-3), 69.1 (C-4), 65.3 (C-1), 59.2 (C-5), 48.6, 32.0, 29.7, 29.5, 29.4, 29.1, 28.6, 27.3, 25.5, 23.1, 22.8 (11CH2), 26.3 and 23.9 (2CH3), 14.3 and 14.1 (2CH2CH3)
- ((1R, 2S, 3R, 4R)-N-Nonyl-1-octhyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt), as an oil (80% ); C23H45NO5, M=471.67: MS m/z 412.4 (M+H). 1H-NMR (400 MHz, CDCl3) δ 4.63 (dd, J2,3=6.3 Hz, J2,1=4.6 Hz, 1H, H-2), 4.56 (d, J3,2=6.3 Hz, 1H, H-3), 3.72 (dd, J5′,5=10.8 Hz, J5,4=4.0 Hz,1H, H-5′), 3.47-3.40 (m, 2H, H-5, H-4), 3.08 (m, 1H, H-1), 2.84-2.80 (m, 2H, CH2), 1.70-1.67 (m, 2H, CH2), 1.51-1.26 (m, 26H), 1.98 (s, 3H, CH3COO31), 1.49 and 1.31 (2s, 6H, 2CH3), 0.88 (bt, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ 179.4 (CH3COO31), 111.8 (C-6), 81.4 (C-2), 82.5 (C-3), 69.3 (C-4), 65.2 (C-1), 59.3 (C-5), 48.8, 32.1, 30.0, 29.7, 29.6, 29.4, 28.7, 27.3, 26.9, 25.6, 22.9 (15CH2), 26.4 and 23.9 (2CH3), 14.3 (2CH2CH3)
- ((1R, 2S, 3R, 4R)-N-Nonyl-1-nonyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt), as an oil (83%); C28H55NO5, M=485.69: MS m/z 426.5 (M+H). 1H-NMR (400 MHz, CDCl3) δ 4.63 (dd, J2,3=6.3 Hz, J2,1=4.6 Hz, 1H, H-2), 4.56 (d, J3,2=6.3 Hz, 1H, H-3), 3.72 (dd, J5′,5=10.8 Hz, J5′,4=4.0 Hz,1H, H-5′), 3.47−3.40 (m, 2H, H-5, H-4), 3.08 (m, 1H, H-1), 2.84−2.80 (m, 2H, CH2), 1.70-1.67 (m, 2H, CH2), 1.51-1.26 (m, 26H), 1.98 (s, 3H, CH3COO31), 1.49 and 1.31 (2s, 6H, 2CH3), 0.88 (bt, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ 111.7 (C-6), 81.9 (C-2), 82.7 (C-3), 68.6 (C-4), 64.3 (C-1), 58.8 (C-5), 48.4, 32.1, 30.1, 29.8, 29.6, 29.5, 27.4, 27.2, 25.8, 22.9 (16CH2), 26.5 and 24.1 (2CH3), 14.3 (2CH2CH3)
((1R, 2S, 3R, 4R)-N-R2-1-R1-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt was dissolved in trifluoroacetic anhydride/water 2:1 (2 ml) at room temperature. The mixture was allowed to stand at room temperature overnight and then evaporated to dryness. Pyrrolidines trifluoroacetate salt were dissolved in aqueous methanol (1:1) and treated with Amberlyst A 21 base resin until the solution had pH 7. The solvent was removed under reduced pressure. The residue was purified by silica gel flash-column, eluting with ethyl acetate/methanol 4:1.
- ((1R, 2S, 3R, 4R)-1-Methyl-N-nonyl-2,3-diol-4-hydroxymethyl pyrrolidine), colorless oil (98 %), C15H32NO3, M=274.42; MS m/z 274.2 (M); 1H-NMR (400 MHz, CDCl3) δ 4.08 (tl, 1H, H-3), 4.02 (t, 1H, H-2), 3.64 (m, 2H, H-5′, H-5), 3.46 (m, 1H, H-1), 2.78 (m, 1H, H-4), 2.60-2.43 (m, 2H, CH2), 1.67 -1.26 (m, 14H, 7CH2), 1.02 (d, J=6.6 Hz, 3H, CH3), 0.88 (t, J=6.5 Hz, 3H, CH3); 13C-NMR (75 MHz, CDCl3) δ 74.1 (C-3), 71.9 (C-2), 69.8 (C-4), 60.3 (C-5), 57.8 (C-1), 47.1 (CH2), 32.1, 29.8, 29.5, 28.4, 27.8, 22.9 (7CH2), 14.3 (CH3), 8.4 (CH3).
- ((1R, 2S, 3R, 4R)-1-Butyl-N-nonyl-2,3-diol-4-hydroxymethyl pyrrolidine), colorless oil (96 %), C18H37NO3, M=315.5; MS m/z 316.4 (M+1); 1H-NMR (400 MHz, CDCl3) δ 4.36 (tl, 1H, H-3), 4.15 (tl, 1H, H-2), 3.88 (m, 2H, H-5′, H-5), 3.38-3.33 (m, 2H, H-1, H-4), 3.07 (m, 2H, CH2), 1.56-1.26 (m, 30H, 15CH2), 0.88 (2CH3); 13C-NMR (75 MHz, CDCl3) δ 71.4 (C-3), 71.2 (C-2), 70.9 (C-4), 67.4 (C-1), 58.9 (C-5), 51.8 (CH2), 32.1, 30.3, 29.8, 29.7, 29.5, 29.5, 28.8, 27.8, 27.6, 25.1, 22.9 (14CH2), 14.3 (2CH3).
- ((1R, 2S, 3R, 4R)-1-Octyl-N-nonyl-2,3-diol-4-hydroxymethyl pyrrolidine), colorless oil (93 %). C22H45NO3, M=371.6; MS m/z 372.4 (M+1). 1H-NMR (400 MHz, CDCl3) δ 4.11 (tl, J3,2=5.0 Hz, 1H, H-3), 4.01 (tl, 1H, H-2), 3.68 (m, 2H, H-5′, H-5), 3.08 (m, 1H, H-1), 2.93 (m, 1H, H-4), 2.68-2.48 (m, 2H, CH2), 1.56-1.26 (m, 30H, 15CH2), 0.88 (2CH3); 13C-NMR (75 MHz, CDCl3) δ 73.6 (C-3), 72.1 (C-2), 69.4 (C-4), 64.3 (C-1), 60.4 (C-5), 48.7 (CH2), 32.1, 30.3, 29.8, 29.7, 29.5, 29.5, 28.8, 27.8, 27.6, 25.1, 22.9 (14CH2), 14.3 (2CH3).
- ((1R, 2S, 3R, 4R)-1-Nonyl-N-nonyl-2,3-diol-4-hydroxymethyl pyrrolidine), colorless oil (97 %). C23H47NO3, M=385.63; MS m/z 386.5 (M+H); 1H-NMR (400 MHz, CDCl3) δ 4.12 (t, J3,2=5.2 Hz, 1H, H-3), 4.02 (dd, J2,3=5.2 Hz, J2,1=4.8 Hz, 1H, H-2), 3.68 (m, 2H, H-5′, H-5), 3.11 (m, 1H, H-1), 2.89 (m, 1H, H-4), 2.71-2.51 (m, 2H, CH2), 1.56-1.26 (m, 32H, 16CH2), 0.88 (2CH3); 13C-NMR (75 MHz, CDCl3) δ 74.0 (C-3), 72.5 (C-2), 69.3 (C-4), 63.7 (C-1), 60.5 (C-5), 47.9 (CH2), 32.1, 30.3, 29.8, 29.5, 29.0, 28.0, 27.6, 25.1, 22.9 (15CH2), 14.3 (2CH3).
2,3-O-Isopropylidene-D-lyxonolactone (5 g, 26.6 mmol) was dissolved in pyridine (8 ml) and methanesulfonylchloride (2 ml, 29.2 mmol, 1.1 eq) was added to a stirred at 0° C. over 10 min. The mixture was kept at 0° C. for 1 h. 0.5 ml water was then added and the mixture was extracted with methylene chloride (15 ml). The extract was washed with HCl 10% (2×5 ml) and with aqueous NaHCO3 (5 ml). The organic phase was dried (MgSO4), filtered and evaporated under reduced pressure to yield 5-O-methanesulfonyl-2,3-O-isopropylidene-D-lyxonolactone (95 %) as colorless crystals.
1H-NMR (400 MHz, CDCl3) δ 4.89 (d, 2H, H-2, H-3), 4.79 (m, 1H, H-4), 4.56 (dd, J5′,5=11.7 Hz, J5′,4=4.1 Hz, 1H, H-5′), 4.48 (dd, J5,5′=11.7 Hz, J5,4=7.6 Hz, 1H, H-5), 3.11 (s, 3H, CH3SO2), 1.49 and 1.40 (2s, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ 172.9 (CO), 115.1 (C-6), 76.4 (C-2), 76.0 (C-4), 75.6 (C-3), 67.1 (C-5), 37.9 (CH3SO2), 26.9 and 25.9 (2CH3).
- Details of synthesis 5-O-methanesulfonyl-2,3-O-isopropylidene-D-lyxonolactone can be also found in (a) Fleet G. W. J.; Ramsden N. G.; Witty D. R. Tetrahedron 1989, 45(1), 319. (b) Fleet G. W. J.; Petursson S.; Campbell A. L.; Mueller R. A.; Behling J. R.; Babiak K. A.; Ng J. S; Scaros M. G.; J. Chem. Soc. Perkin Trans 1, 1989, 665. (c) Han S. -Y.; Joullié M. M.; Fokin V. V.; Petasis N. A. Tetrahedron: Asymmetry 1997, 3(12), 2535. (d) Gogskesen M.; Lundt I.; Søtofte I. Tetrahedron: Asymmetry 2000, 11, 567, all incorporated herein by reference.
5-O-Methanesulfonyl-2,3-O-isopropylidene-D-lyxono-1,4-lactone (5 g, 18 mmol) was dissolved in THF (125 ml) anhydrous under Ar. The solution was cooled to −68° C., maintaining the temperature between −50° C.˜−40° C., the Grignard reagent (1.5 eq) was added with stirred over 20 min. The temperature was allowed to warm to 0° C. and the solution was stirred 1 h. After quenching with saturated aqueous NH4Cl, the mixture was extracted with ethyl acetate (2×15 ml). The combined extracts were washed with saturated aqueous NH4Cl, dried over Na2SO4, and filtered. Evaporation of the filtrate under vacuo afforded 1-R1-5-O-methanesulfonyl-2,3-O-isopropylidene-D-lyxoses as a stereoisomer mixture at the anomeric carbon atom.
- 1-Nonyl-5-O-methanesulfonyl-2,3-O-isopropylidene-D-lyxose, (94 %) colorless oil. Ratio of isomers α:β˜22:78. C18H34O7S, M=394.53. 1H-NMR (400 MHz, CDCl3) δ β: 4.82 (dd, J3,2=5.8 Hz, J3,4=3.4 Hz, 1H, H-3), 4.49 (dd, J5′5=8.3 Hz, J5′,4=1.5 Hz, 1H, H-5 ), 4.47 (d, J2,3=5.8 Hz, 1H, H-2), 4.40 -4.33 (m, 2H, H-4, H-5), 3.06 (s, 3H, CH3SO2), 1.88-1.68 (m, 2H, CH2), 1.45 and 1.30 (2s, 6H, 2CH3), 1.45-1.24 (m, 14H, CH2), 0.88 (t1, 3H, CH3); α: 4.78 (dd, J3,2=6.0 Hz, J3,4=3.9 Hz, H-3), 4.52-4.43 (m, H-5′), 4.40-4.33 (m. 2H, H-2, H-5), 3.93 (m, 1H, H-4), 3.07 (s, 3H, CH3SO2), 1.54 and 1.36 (2s, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ β: 112.8 (C-6), 107.2 (C-1), 84.5 (C-2), 80.1 (C-3), 76.3 (C-4), 68.4 (C-5), 37.4 (CH3SO2), 35.1, 31.8, 29.7, 29.5, 29.4, 29.3, 23.2, 22.6 (8CH2), 25.9 and 25.8 (2CH3), 14.1 (CH3); α: 113.6 (C-6), 104.6 (C-1), 79.7 (C-3), 73.8 (C-4), 68.2 (C-5), 37.5 (CH3SO2), 25.8 and 24.6 (2CH3), 14.1 (CH3).
1-R-5-O-Methanesulfonyl-2,3-O-isopropylidene-D-lyxose (14 mmol) was dissolved in NH3/EtOH 3:1 (50 ml). The solution was allowed to stand 2 days at room temperature in a sealed flask. The solvent was removed under reduced pressure, and the residue was dissolved in methanol (5 ml) and dried over Na2SO4, and filtered. Evaporation of the filtrate under vacuo afforded the crude product which was purified by silica gel column chromatography, eluting with ethyl acetate, to afford (2R, 3S, 4S)-1-R1-2,3-isopropylidenedioxy-4-hydroxymethyl-1-pyrrolines as colorless crystalline products.
- (2R, 3S, 4S)-1-Nonyl-2,3-isopropylidenedioxy-4-hydroxymethyl-1-pyrroline), colorless crystals, mp 89-90° C. (39 %). C17H31NO3, M=297.24: MS m/z 298.3 (M+H); calcd for C17H31NO3 (M+H)+298.2382, found 298.2379. 1H-NMR (400 MHz, CDCl3) δ 4.95 (d, J2,3=5.5 Hz, 1H, H-2), 4.58 (d, J3,2=5.5 Hz, 1H, H-3), 4.21 (bs, 1H, H-4), 3.88 (dd, J5′,5=11.3 Hz, J5′,4=3.3 Hz, 1H, H-5′), 3.78 (dd, J5′,5=11.3 Hz, J5,4=3.4 Hz, 1H, H-5), 2.48-2.42 (m, 2H, CH2), 1.69-1.61 (m, 2H, CH2), 1.36-1.26 (m, 12H, CH2), 1.36 and 1.35 (2s, 6H, 2CH3), 0.88 (t, J=7.0 Hz, 3H, CH3). 13C-NMR (75 MHz, CDCl3) δ 179.5 (C═N), 111.8 (C-6), 86.6 (C-2), 80.7 (C-3), 77.8 (C-4), 63.0 (C-5), 32.1, 31.4, 29.8, 29.6, 29.5, 27.1, 22.9 (8CH2), 26.3 and 25.8 (2CH3), 14.3 (CH3).
(2R, 3S, 4S)-1-R1-2,3-Isopropylidenedioxy-4-hydroxymethyl-1-pyrroline (2.5 mmol) in acetic acid (8 ml) was shaken overnight under hydrogen in the presence of 10% palladium-carbon (300 mg) using 50 psi pressures. TLC (ethyl acetate: methanol, 4:1) showed complete reactions. The catalyst was removed by filtration through a celite pad and rinsed with acetic acid. Concentration in vacuo and purification of the residue by column chromatography (silica gel, elute with ethyl acetate: methanol, 4:1) afforded (1S, 2R, 3S, 4S)-1-R1-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt as colorless crystalline products.
- (1S, 2R, 35, 4S)-1-Nonyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt, colorless crystals, mp 87-88° C. (90 %). C19H37NO5, M=359.45; For C17H33NO3: MS m/z 300.3 (M+H). 1H-NMR (400 MHz, CDCl3) δ 5.39 (bs, NH), 4.57 (dd, J2,3=5.3 Hz, J2,1=4.1 Hz, 1H, H-2), 4.45 (d, J3,2=5.3 Hz, 1H, H-3), 3.64 (dd, J5′,5=11.2 Hz, J5′,4=4.7 Hz, 1H, H-5′), 3.41 (dd, J5,4=11.2 Hz, J5,4=7.8 Hz, 1H, H-5), 3.33 (dd, J4,5=7.8 Hz, J4,5′=4.7 Hz, 1H, H-4), 3.18 (m, 1H, H-1), 1.97 (s, 3H, CH3COO31), 1.62 (m, 2H, CH2), 1.47-1.27 (m, 14H, 7CH2), 1.48 and 1.31 (2s, 6H, 2CH3), 0.88 (t, J=7.0 Hz, 3H, CH3); 13C-NMR (75 MHz, CDCl3) δ 178.9 (CH3COO31), 111.2 (C-6), 83.3 (C-3), 81.6 (C-2), 65.8 (C-4), 61.4 (C-1), 60.3 (C-5), 31.9, 29.8, 29.6, 29.5, 29.4, 28.5, 26.9, 22.7 (8CH2), 26.2 and 24.1 (2CH3), 14.2 (CH3).
(1S, 2R, 3S, 4S)-1-R1-2,3-Isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt (2 mmol) were treated with nonyl aldehide (4 mmol, 2 eq) and a catalytic amount of acetic acid in methanol (4 ml) at RT for 1 h under Ar. Then 10% palladium-carbon (200 mg) was added and the reaction mixture was shaken under hydrogen (45 psi). Over night TLC (ethyl acetate) showed complete reactions. The catalyst was removed by filtration through a celite pad and the solvent removed under reduced pressure. The residue was purification by column chromatography (silica gel, elute with ethyl acetate).
- (1S, 2R, 3S, 4S)-N-Nonyl-1-nonyl-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt), as an oil (83 %); C28H55NO5, M=485.69: MS m/z 426.5 (M+H). 1H-NMR (400 MHz, CDCl3) δ 4.63 (dd, J2,3=6.3 Hz, J2,1=4.6 Hz, 1H, H-2), 4.56 (d, J3,2=6.3 Hz, 1H, H-3), 3.72 (dd, J5′,5=10.8 Hz, J5′,4=4.0 Hz,1H, H-5′), 3.47-3.40 (m, 2H, H-5, H-4), 3.08 (m, 1H, H-1), 2.84-2.80 (m, 2H, CH2), 1.70-1.67 (m, 2H, CH2), 1.51-1.26 (m, 26H), 1.98 (s, 3H, CH3COO31), 1.49 and 1.31 (2s, 6H, 2CH3), 0.88 (bt, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ 111.7 (C-6), 81.9 (C-2), 82.7 (C-3), 68.6 (C-4), 64.3 (C-1), 58.8 (C-5), 48.4, 32.1, 30.1, 29.8, 29.6, 29.5, 27.4, 27.2, 25.8, 22.9 (16CH2), 26.5 and 24.1 (2CH3), 14.3 (2CH2CH3)
(1S, 2R, 3S, 4S)-N-R2-1-R1-2,3-isopropylidenedioxy-4-hydroxymethyl pyrrolidine acetate salt was dissolved in trifluoroacetic anhydride/water 2:1 (2 ml) at room temperature. The mixture was allowed to stand at room temperature overnight and then evaporated to dryness. The residue was purified by silica gel flash-column, eluting with ethyl acetate/methanol 4:1.
- (1S, 2R, 3S, 4S)-1-Decyl-2,3-diol-4-hydroxymethyl pyrrolidine trifluoroacetate salt, colorless crystals, mp 114-5° C. (92 %). C17F3H32NO5, M=387.2; For C15H31NO3: MS m/z 274.2 (M+H)+: Mass spectrum calculated for C15H31NO3 (M+H)+274.2382, found 274.2384. 1H-NMR (400 MHz,CD30D) δ 4.14 (dd, J3,4=8.8 Hz, J3,2=3.6 Hz,1H, H-3), 4.05 (dd, J2,3=3.6 Hz, J2,1=2.8 Hz,1H, H-2), 3.85 (dd, J5′,5=11.9 Hz, J5′,4=3.1 Hz,1H, H-5′), 3.80 (dd, J5,5′=11.9 Hz, J5,4=5.6 Hz,1H, H-5), 3.43 (m, 2H, H-1, H-4); 1.87-1.61 (m, 2H, CH2); 1.34-126 (m, 16H, CH2); 0.87 (t, J=6.5 Hz, 3H, CH3); 13C-NMR (75 MHz, CD3OD) δ 73.4 (C-3), 72.1 (C-2), 63.9, 63.3 (C-4, C-1), 59.8 (C-5), 33.2, 30.9, 30.8, 30.7, 30.6, 27.9, 27.2 (9CH2) 14.6 (CH3).
- (1S, 2R, 35, 4S)-1-Nonyl-N-nonyl-2,3-diol-4-hydroxymethyl pyrrolidine trifluoroacetate salt, semi crystalline solid (87 %). C25F3H48NO5, M=499.6; For C23H47NO3: MS m/z 386.5 (M+1). 1H-NMR (400 MHz, CDCl3) 6 4.45 (sl, 1H, H-3), 4.18 (sl,1H, H-2), 3.91 (m, 2H, H-5′, H-5), 3.48 (m, 1H, H-1, H-1), 3.41 (m, 1H, H-1, H-4), 3.20 (m, 2H, CH2), 1.96-1.26 (m, 32H, 16CH2), 0.88 (2CH3). 13C-NMR (75 MHz, CDCl3) δ 72.7 (C-4), 71.1, 70.9 (C-2, C-3), 68.4 (C-1), 59.1 (C-5), 53.6 (CH2), 32.0, 31.9, 29.6, 29.5, 29.3, 26.8, 26.5, 25.5, 24.4, 22.8 (1SCH2), 14.3 (2CH3).
Synthesis 2003, 7, 1087-90. (b) Manna S.; McAnalley B. H.; Ammon H. L. Carbohydr. Res. 1993, 243, 11-27. (c) Goodyear E. H.; Haworth W. N. J. Chem. Soc. 1927, 3136-3146. (d) Ohle H.; Berend G. Chem. Ber. 1925, 58, 2590-2592. (e) Tam T. F.; Fraser-Reid B. J Org. Chem. 1980, 45, 1344-1346. (f) Joseph C. C.; Regeling H.; Zwanenburg B.; Chittenden G. J. F. Tetrahedron 2002, 58, 6907, all incorporated herein by reference in their entirety. A solution of 2,3-O-isopropilidene-D-mannono-1,4-lactone (3.55 g, 16.3 mmol) and triphenylmethyl chloride (6.34 g, 22.7 mmol, 1.4 eq) in pyridine (60 ml) was stirred for 24 h. The pyridine was removed under reduced pressure, and the residue was purified by silica gel column chromatography, eluting with ethyl acetate: xexane 1:2, to afford 2,3-O-isopropylidene-6-O-triphenylmethyl-D-mannono-1,4-lactone (68 %) as a white crystalline solid, m.p. 68-69° C. C28H28O6, M=460.53: MS m/z 483.7 (M+Na)+; Calcd for C28H28O6 (M+Na)+483.1784, found 483.1797; 1H-NMR (400 MHz, CDCl3) δ 7.44 (d, 6H, 3 Ph, H-2′; H-6′), 7.31 (t, 6H, H-3′, H-5′), 7.24 (t, 3H, H-4′), 4.90 (dd, 1H, J3,2=5.3 Hz, J3,4=3.5 Hz, H-3); 4.79 (d, 1H, J3,2=5.3 Hz, H-2); 4.47 (dd, 1H, J4,5=8.4 Hz, J4,3=3.5 Hz, H-4); 4.09-4.06 (m, 1H, H-5); 3.50 (dd, J6′,6=10.0 Hz, J6′,5=3.4 Hz, 1H, H-6′), 3.40 (dd, J6,6′=10.0, J6,5=4.9 Hz, 1H, H-6); 1.41 and 1.46 (2s, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ 173.7 (CO), 143.7 (C-1′), 128.2, 128.7 (C-2′, C-3′), 127.5 (C-4′), 114.5 (C(CH3)2), 87.3 (CPh3), 77.5 (H-4), 76.6 (H-3), 76.2 (H-2), 68.7 (H-5), 64.5 (H-6), 26.2 and 27.0 (2CH3).
Step 2: Synthesis of 2,3-O-Isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-D-mannono-1,4-lactone
2,3-O-Isopropylidene-6-O-triphenylmethyl-D-mannono-1,4-lactone (3 g, 6.5 mmol) was dissolved in pyridine (6 ml) and methanesulfonylchloride (1 ml, 13 mmoli, 2 eq)
Pyrrolidines trifluoroacetate salt were dissolved in aqueous methanol (1:1) and treated with Amberlyst A 21 base resin until the solution had pH 7. The solvent was removed under reduced pressure afforded (1S, 2R, 3S, 4S)-1-nonyl-N-nonyl-2,3-diol-4-hydroxymethyl pyrrolidine, colorless oil (96 %).
C23H47NO3, M=385.63; MS m/z 386.5 (M+H). 1H-NMR (400 MHz, CDCl3) δ 4.08 (t, J3,2=5.2 Hz, 1H, H-3), 4.0 (dd, J2,3=5.2 Hz, J2,1=4.8 Hz, 1H, H-2), 3.66 (d, 2H, H-5′, H-5), 3.08 (m, 1H, H-1), 2.87 (m, 1H, H-4), 2.68-2.48 (m, 2H, CH2), 1.56 -1.26 (m, 32H, 16CH2), 0.88 (2CH3).13C-NMR (75 MHz, CDCl3) δ 72.7 (C-3), 71.1 (C-2), 70.9 (C-4), 68.4 (C-1), 59.0 (C-5), 53.6 (CH2), 32.1, 30.4, 29.8, 29.5, 29.3, 28.1, 27.7, 25.1, 22.9 (15CH2), 14.3 (2CH3).
EXAMPLE 3 ((1S, 2R, 3S, 4S, 5R)-1-octhyl-2,3-diol-5,6-dihydroxyethyl pyrrolidine trifluoroacetate salt) Step 1: Synthesis of 2,3-O-Isopropylidene-6-O-triphenylmethyl-D-mannono-1,4-lactone
2,3-O-isopropilidene-D-mannono-1,4-lactone was prepared from D-mannose (Sigma Aldrich) using known procedure, see. e.g. (a) Vonlanthen D.; Leumann C. J. was added to a stirred at 0° C. over 10 min. The mixture was kept at 0° C. for 5 h. 0.5 ml water was then added and the mixture was extracted with methylene chloride. The extract was washed with HCl 10% and with aqueous NaHCO3. The organic phase was dried (MgSO4), filtered and evaporated under reduced pressure to yield 2,3-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-D-mannono-1,4-lactone (98%) as colorless crystals, m.p. 90-91° C.
1H-NMR (400 MHz, CDCl3) δ 7.44 (d, 6H, 3Ph, H-2′; H-6′), 7.31 (t, 6H, 3Ph H-3′, H-5′), 7.24 (t, 3H, 3Ph, H-4′), 5.01 (m, J5,4=7.5 Hz, J5,6=4.5 Hz, J5,6′=2.1 Hz, 1H, H-5), 4.90-4.86 (m, 2H, H-3, H-4), 4.80 (d, J2,3=5.0 Hz, 1H, H-2), 3.72 (dd, J6′,6=11.3 Hz, J6′,5=2.1 Hz, 1H, H-6′), 3.40 (dd, J6,6′=11.3 Hz, J6,5=4.5 Hz, 1H, H-6), 3.02 (s, 3H, CH3SO2), 1.36 and 1.37 (2s, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ 172.8 (CO), 143.3 (C-1), 128.2, 128.8 (C-2′, C-3′), 127.5 (C-4′), 114.7 (C(CH3)2), 87.3 (CPh3), 77.8 (H-5), 76.0 (H-2), 75.6 (H-4), 75.5 (H-3), 62.5 (H-6), 39.0 (CH3SO2), 26.1 and 26.9 (2CH3).
Step 3: Synthesis of 1-Methyl-2,3-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-D-mannose
2,3-O-Isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-D-mannono-1,4-lactone (3.2 g, 6 mmol) was dissolved in THF (40 ml) anhydrous under Ar. The solution was cooled to −68° C., maintaining the temperature between −50° C. ˜40° C., the Grignard reagent (3 ml, 8.9 mmol, 1.5 eq) was added with stirred over 20 min. The temperature was allowed to warm to 0° C. and the solution was stirred 2 h. After quenching with saturated aqueous NH4Cl, the mixture was extracted with ethyl acetate. The combined extracts were washed with saturated aqueous NH4Cl, dried over Na2SO4, and filtered. Evaporation of the filtrate under vacuo afforded 1-methyl-2,3-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-D-mannose (99 %) as a colorless oil. 1H-NMR (500 MHz, CDCl3) δ 7.46 (d, 6H, 3Ph, H-2′; H-6′), 7.29 (t, 6H, 3Ph, H-3′, H-5′); 7.22 (t, 3H, 3Ph, H-4′); 4.99 (m, 1H, J5,4=7.6 Hz, J5,6=5.1, J5,6′=2.1, H-5), 4.82 (dd, 1H, J3,2=5.8, Hz, J3,4=3.8 Hz, H-3); 4.45 (dd, 1H, J4,5=7.6, Hz, J4,3=3.8 Hz, H-4); 4.42 (d, 1H, J2,3=5.8, H-2); 3.67 (dd, 1H, J6′,6=11.1 Hz, J6′,5=2.1 Hz, H-6′), 3.36 (dd, 1H, J6,6′=11.1 Hz, J6,5 =5.1 Hz, H-6), 3.02 (s, 3H, CH3SO2); 1.37 (s, 3H, CH3); 1.28 and 1.31 (2s, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ 143.8 (C-1′), 128.9 and 127.9 (C-2′ and C-3′), 127.2 (C-4′), 112.9 (C(CH3)2), 105.3 (C-1), 86.9 (CPh3), 85.4 (H-2), 80.3 (H-3), 79.5 (H-5), 76.6 (H-4), 63.1 (H-6), 39.0 (CH3SO2), 26.8 and 25.7 (2CH3), 22.3 (CH3).
1-Methyl-2,3-O-isopropylidene-5-O-methanesulfonyl-6-O-triphenylmethyl-D-mannose (3 g, 5.4 mmol) was dissolved in NH3/EtOH 2:1 (50 ml). The solution was allowed to stand 4 days at room temperature in a sealed flask. The solvent was removed under reduced pressure, and the residue was dissolved in methanol and dried over Na2SO4, and filtered. Evaporation of the filtrate under vacuo afforded the crude product which was purified by silica gel column chromatography, eluting with ethyl acetate, to afford ((2R,3S,4S,5R)-1-methyl-2,3-isopropylidenedioxy-6-O-triphenylmethyl-5,6-hydroxyethyl-1-pyrroline (42 %) as colorless crystaline products, m.p. 85° C.
C29H31NO4, M=457.57: MS m/z 480.3 (M+Na); Calcd for C29H31NO4 (M+Na) 480.2151, found 480.2142; 1H-NMR (400 MHz, CDCl3) δ 7.44 (d, 6H, 3Ph, H-2′; H-6′), 7.30 (t, 6H, 3Ph, H-3′, H-5′); 7.23 (t, 3H, 3Ph, H-4′); 4.81 (s, J3,2=5.6 Hz, 1H, H-3); 4.58 (s, J2,3=5.6 Hz, 1H, H-2), 4.19 (s, 1H, H-4), 3.96 (m, 1H, H-5), 3.35 (dd, J6′,6=9.5 Hz, J6′,5=7.1 Hz, 1H, H-6′), 3.27 (dd, J6,6′=9.5 Hz, J6,5=3.5 Hz, 1H, H-6), 2.06 (s, 3H, CH3), 1.33 and 1.32 (2s, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ 175.5 (C=N), 143.8 (C-1′), 128.9, 127.9 (C-2′, C-3′), 127.2 (C-4′), 111.7 (C-7), 87.5 (H-3), 87.3 (CPh3), 78.9, 78.7 (H-2, H-4), 70.6 (H-5), 65.7 (H-6), 27.1 and 25.9 (2CH3), 17.2 (CH3).
Step 5: Synthesis of (1S,2R,3S,4S, 5R)-1-methyl-2,3-isopropylidenedioxy-6-O-triphenylmethyl-5,6-dihydroxyethyl pyrrolidine acetate salt
A solution of ((2R,3S,4S,5R)-1-methyl-2,3-isopropylidenedioxy-6-O-triphenylmethyl-5,6-hydroxyethyl-1-pyrroine (1 g, 2.1 mmol) in acetic acid (8 ml) was shaken overnight under hydrogen in the presence of 10% palladium-carbon (300 mg) using 50 psi pressures. TLC (ethyl acetate:methanol, 4:1) showed complete reactions. The catalyst was removed by filtration through a celite pad and rinsed with acetic acid. Concentration in vacuo and purification of the residue by column chromatography (silica gel, elute with ethyl acetate/methanol 4:1) afforded ((1S,2R,3S,4S,5R)-1-methyl-2,3-isopropylidenedioxy-6-O-triphenylmethyl-5,6-dihydroxyethyl pyrrolidine acetate salt (85%) as a colorless crystals, mp 167-170° C. C31H37NO6, M=459.58; MS m/z 482.3 (M+Na); 1H-NMR (400 MHz, CDCl3) δ 7.42 (d, 6H, 3Ph, H-2′, H-6′), 7.29-7.19 (m, 9H, 3Ph, H-3′, H-4′, H-5′), 4.82 (d, J3,2=5.7 Hz, 1H, H-3), 4.82 (d, J2,3=5.7 Hz, J2,1=4.8 Hz, 1H, H-2), 4.10 (m, 1H, H-5), 3.73-3.66 (m, 2H, H-1, H-4), 3.30 (dd, 1H, J6′,6=9.5 Hz, J6′,5=6.1 Hz,1H, H-6′), 3.19 (t, J6,6′=9.5 Hz, J6,5=7.4 Hz,1H, H-6), 2.0 (2, 3H, CH3COO31), 1.50 and 1.31 (2s, 6H, 2CH3), 1.25 (d, J=6.6 Hz, 3H, CH3); 13C-NMR (75 MHz, CDCl3) δ 178.1 (CH3COO31), 143.7 (C-1′), 128.9, 128.0 (C-2′, C-3′), 127.3 (C-4′), 111.4 (C-7), 87.2 (CPh3), 81.9 (C-2, C-3), 69.1 (C-5), 66.8 (C-4), 64.6 (C-6), 58.1 (C-1), 26.4 and 24.2 (2CH3), 23.3 (CH3COO31), 13.3 (CH3).
Step 6: Synthesis of (1S,2R,3S,4S,5R)-1-methyl-N-nonyl-2,3-isopropylidenedioxy-6-O-triphenylmethyl-5,6-dihydroxyethyl pyrrolidine acetate salt
((1S,2R,3S,4S,5R)-1-Methyl-2,3-isopropylidenedioxy-6-O-triphenylmethyl-5,6-dihydroxyethyl pyrrolidine acetate salt (0.95 g, 1.8 mmol) were treated with nonyl aldehide (0.6 ml, 3.6 mmol, 2 eq) and acetic acid (0.1 ml) in methanol (4 ml) at RT for 1 h under Ar. Then 10% palladium-carbon (100 mg) was added and the reaction mixture was shaken under hydrogen (45 psi). Over night TLC (ethyl acetate) showed complete reactions. The catalyst was removed by filtration through a celite pad and the solvent removed under reduced pressure. Purification by flash chromatography (ethyl acetate) afforded ((1S,2R,3S,4S,5R)-1-methyl-N-nonyl-2,3-isopropylidenedioxy-6-O-triphenylmethyl-5,6-dihydroxyethyl pyrrolidine acetate salt (80 %) as an colorless oil. C40H55NO6, M=646.4; For C38H51NO4: MS m/z 586.4 (M+H); 1H-NMR (400 MHz, CDCl3) δ 7.42 (d, 6H, 3Ph, H-2′; H-6′), 7.30-7.24 (m, 9H, 3Ph, H-3′, H-4′, H-5′); 4.74 (d, J3,2=5.2 Hz, 1H, H-3), 4.49 (dd, J2,3=5,2, J2,1=4.1 Hz, 1H, H-2), 4.34 (m, 1H, H-5), 4.23 (m, 1H, H-1), 4.05 (s, 1H, H-4), 3.32 (dd, J6′,6=7.5 Hz, J6′,5=4.4 Hz,1H, H-6′), 3.16 (t, J6′,6=7.5 Hz, 1H, H-6′), 3.09-2.94 (m, 2H, CH2), 2.27(m, 2H, CH2), 1.81-1.26 (m, 15H, 6CH2, CH3), 1.50 and 1.29 (2s, 6H, 2CH3), 1.87 (m, 3H, CH3); 13C-NMR (75 MHz, CDCl3) δ 143.8 (C-1′), 128.9 and 128.0 (C-2′ and C-3′), 127.3 (C-4′), 111.7 (C(CH3)2), 87.2 (CPh3), 87.2 (H-2), 79.1 (H-2, H-4), 67.8 (H-5), 64.1 (H-6), 49.6, 35.9, 32.1, 29.6, 29.5, 29.4, 29.4, 26,5, 26.3, 23.7, 22.8 (CH2), 27.3 and 25.8 (2CH3), 14.3 (CH3), 10.4 (CH3).
((1S, 2R, 3S, 4S, 5R)-1-Methyl-N-nonyl-2,3-isopropylidenedioxy-6-O-triphenylmethyl-5,6-dihydroxyethyl pyrrolidine acetate salt (0.85 g, 1.46 mmol) was dissolved in trifluoroacetic acid/water 1:1 (2 ml) at room temperature. The mixture was allowed to stand at room temperature overnight and then evaporated to dryness. Purification by flash chromatography (acetate/methanol 4:1) afforded ((1S, 2R, 3S, 4S, 5R)-1-octhyl-2,3-diol-5,6-dihydroxyethyl pyrrolidine trifluoroacetate salt (87 %) as a colorless oil.
C18F3H34NO6, M=417.45; For C16H33NO4 MS m/z 304.3 (M+H).
EXAMPLE 4 Preparation of ((1S, 2R, 3S, 4S, 5S)-1-octyl-2,3-diol-5,6-dihydroxyethyl pyrrolidine) Step 1: Synthesis of 6-O-tert-Butyldimethylsilyl-2,3-O-isopropylidene-L-gulonolactone
L-Gulono-1,4-lactone(Sigma Aldrich) was converted into the diacetonide with dimetoxypropane in the presence of catalytic amount of p-toluenesulfonic acid, the side chain isopropylidene protecting group was selectively hydrolysed to 2,3-O-isopropylidene-L-gulonolactone, see e.g. (a) Fleet G. W.; Ramsden N. G.; Witty D. R. Tetrahedron Letters 1988, 29(23), 2871. (b) Fleet G. W.; Ramsden N. G.; Witty D. R. Tetrahedron 1989, 45(1), 319. (c) Ogura H.; Takakashi H.; Itoh T. J. Org. Chem. 1972, 37, 72, all incorporated herein by reference in their entirety. A solution of tert-butyldimethylsilyl chloride (3.47 g, 23 mmoli, 1.2 eq) and imidazole (1.9 g, 28 moli, 1.45 eq) in dry DMF (40 ml) was added to a stirred solution of 2,3-O-isopropilidene-L-gulonolactone-1,4-lactone (4.2 g, 19 mmoli) in dry DMF (60 ml) at −10° C. under argon. The reaction mixture was then stirred at RT for 5 h, when TLC (ethyl acetate hexane 1:2) showed no starting material. The solvent was removed under reduced pressure and the residue dissolved in chloroform (15 ml), the chloroform solution was washed with water, dried (MgSO4) and evaporated. Purification by flash chromatography (ethyl acetate/hexane 1:2) afforded 6-O-tert-butyldimethylsilyl-2,3-O-isopropylidene-L-gulonolactone (%) as colorless oil (lit 71%, colorless oil).
1H-NMR (400 MHz, CDCl3) δ
13C-NMR (75 MHz, CDCl3) δ
Step 2: Synthesis of 5-O-Methanesulfonyl-6-O-tert-butyldimethylsilyl-2,3-O-isopropylidene-L-gulonolactone
6-O-tert-Butyldimethylsilyl-2,3-O-isopropylidene-L-gulonolactone (3 g, 9 mmoli, 1 eq) was dissolved in pyridine (6 ml) and methanesulfonylchloride (0.88 ml, 10 mmoli, 1.2 eq) was added to a stirred at 0° C. over 10 min. The mixture was kept at 0° C. for 1 h. 0.2 ml water was then added and the mixture was extracted with methylene chloride (15 ml). The extract was washed with HCl 10% (5 ml) and with aqueous NaHCO3 (5 ml). The organic phase was dried (MgSO4), filtered and evaporated under reduced pressure to yield 5-O-methanesulfonyl-6-O-tert-butyldimethylsilyl-2,3-O-isopropylidene-L-gulonolactone (90%) as a crystals, mp 113-114° C. C16H30O8SSi, M=383.3: MS m/z (M+)
1H-NMR (400 MHz, CDCl3) δ
13C-NMR (75 MHz, CDCl3) δ
Step 3: Synthesis of 1-octyl-2,3-O-isopropylidene-5-O-methanesulfonyl-6-O-tert-butyldimethylsilyl-L-gulose
5-O-Methanesulfonyl-6-O-tert-butyldimethylsilyl-2,3-O-isopropylidene-L-gulono-1,4 lactone (1 eq) was dissolved in THF (160 ml) anhydrous under Ar. The solution was cooled to −68° C., maintaining the temperature between −50° C.˜40° C., the Grignard reagent (1.5 eq) was added with stirred over 20 min. The temperature was allowed to warm to 0° C. and the solution was stirred 2 h. After quenching with saturated aqueous NH4Cl, the mixture was extracted with ethyl acetate. The combined extracts were washed with saturated aqueous NH4Cl, dried over Na2SO4, and filtered. Evaporation of the filtrate under vacuo afforded 1-octyl-2,3-O-isopropylidene-5-O-methanesulfonyl-6-O-tert-butyldimethylsilyl-L-gulose (95%), colorless crystals, mp 76-78° C., as a stereoisomer mixture at the anomeric carbon atom. Ratio of isomers α:β˜79:21. C24H48O8SSi, M=524.78: MS m/z 547.1 (M+Na); 1H-NMR (400 MHz, CDCl3) δ α: 4.79-4.72 (m, 2H, H-3, H-5), 4.48 (d, J2,3=5.9 Hz, 1H, H-2), 4.37 (dd, J4,5=8.9, Hz, J4,3=3.7 Hz, H-4), 4.04-3.96 (m, 2H, H-6′, H-6), 3.06 (s, 3H, CH3SO2), 1.87-1.64 (m, 2H, CH2), 1.45 and 1.30 (2s, 6H, 2CH3), 1.45-1.24 (m, 12H, 6CH2), 0.90-0.86 (m, 12H, 4CH3), 0.1 (s, 6H, 2CH3); β: 4.31 (d, J2,3=5.9 Hz, 1H, H-2), 3.88 (dd, J4,5=8.5, Hz, J4,3=3.5 Hz, H-4), 3.11 (s, 3H, CH3SO2), 1.54 and 1.36 (2s, 6H, 2CH3); 13C-NMR (75 MHz, CDCl3) δ α: 112.9 (C-7), 106.9 (C-1), 85.4 (C-2), 83.6, 80.2 (C-3, C-5), 77.3 (C-4), 63.6 (C-6), 38.5 (CH3SO2), 35.5, 32.1, 29.9, 29.6, 29.4 (CH2), 26.4 and 24.9 (2CH3), 26.1 (3CH3), 23.3, 22.8, (CH2) 18.5 (C(CH3)3), 14.3 (CH3), −5.4 (2CH3); β: 113.5 (C-7), 104.1 (C-1), 83.7 and 79.7 (C-3, C-5), 82.1 (C-2), 74.9 (H-4), 63.8 (H-6), 38.7 (CH3SO2).
1-Octyl-2,3-O-isopropylidene-5-O-methanesulfonyl-6-O-tertbutyldimethylsilyl-L-gulose was dissolved in aq NH3 and EtOH. The solution was allowed to stand 4 days at room temperature in a sealed flask. The solvent was removed under reduced pressure, and the residue was dissolved in methanol, dried over Na2SO4, and filtered. Evaporation of the filtrate under vacuo afforded the crude product which was purified by silica gel column chromatography, eluting with ethyl acetate, to afford ((2R, 3S, 4S, 5S)-1-octyl-2,3-isopropylidenedioxy-6-O-tert-butyldimethylsilyl-5,6-hydroxyethyl-1-pyrroline as a colorless oil (25%). C23H45NO4Si, M=427.7: MS m/z 428.5 (M+H). 1H-NMR (400 MHz, CDCl3) δ 4.91 (s, J3,2=5.5 Hz, 1H, H-3), 4.51 (s, J2,3=5.5 Hz, 1H, H-3), 4.34 (s, 1H, H-4), 4.08 (m, 1H, H-5), 3.73 (dd, H6′, 6=11.6 Hz, J6′,5=3.2 Hz, 1H, H-6′), 3.66 (dd, J6,6′=11.6 Hz, J6,5=5.2 Hz, 1H, H-6), 2.50-2.37 (m, 2H, CH2), 1.71-1.26 (m, 18H, 8CH2), 0.93-0.90 (m, 12H, 4CH3), 0.1 (s, 6H, 2CH3). 13C-NMR (75 MHz, CDCl3) δ 179.1 (C═N), 111.6 (C-7), 86.2 (C-2), 81.1 (C-3), 79.9 (C-4), 72.8 (C-5), 65.3 (C-6), 32.1, 31.1, 29.9, 29.6, 29.5, 29.3, 27.1, 26.0, 22.8 (7CH2, 2CH3), 25.9 (3CH3), 18.2 (C(CH3)3), 14.3 (CH3), −4.2, −4.6 (2CH3).
A solution of ((2R, 3S, 4S, 5S)-1-octyl-2,3-isopropylidenedioxy-6-O-tert-butyldimethylsilyl-5,6-hydroxyethyl-1-pyrroline in acetic acid was shaken overnight under hydrogen in the presence of 10% palladium-carbon using 50 psi pressures. TLC (ethyl acetate: methanol, 4:1) showed complete reactions. The catalyst was removed by filtration through a celite pad and rinsed with acetic acid. Concentration in vacuo and purification of the residue by column chromatography (silica gel, elute with ethyl acetate: methanol, 4:1) afforded ((1S, 2R, 3S, 4S, 5S)-1-octhyl-2,3-isopropylidenedioxy-6-O-tert-butyldimethylsilyl-5,6-dihydroxyethyl pyrrolidine acetate salt as a colorless crystaline product, mp 87-89° C. (45%). C23H47NO4Si, M=429.16: MS m/z 430.3 (M+H)+.
1H-NMR (400 MHz, CDCl3) δ
13C-NMR (75 MHz, CDCl3) δ
Step 6: Synthesis of ((1S, 2R, 3S, 4S, 5S)-1-octyl-2,3-diol-5,6-dihydroxyethyl pyrrolidine
((1S, 2R, 3S, 4S, 5S)-1-octhyl-2,3-isopropylidenedioxy-6-O-tert-butyldimethylsilyl-5,6-dihydroxyethyl pyrrolidine acetate salt was dissolved in trifluoroacetic acid/water 1:1 (2 ml) at room temperature. The mixture was allowed to stand at room temperature overnight and then evaporated to dryness. Pyrrolidines trifluoroacetate salt were dissolved in aqueous methanol (1:1) and treated with Amberlyst A 21 base resin until the solution had pH 7. The solvent was removed under reduced pressure. Purification by flash chromatography (ethyl acetate/methanol 4:1) afforded ((1S, 2R, 3S, 4S, 5S)-1-octyl-2,3-diol-5,6-dihydroxyethyl pyrrolidine (94%) as a colorless oil. C14H29NO4, M=275.39; MS m/z 276.3 (M+H); 1H-NMR (400 MHz,CD3OD) δ 4.1 (dd, J3,4=8.3 Hz; J3,2=4.0 Hz, 1H, H-3), 3.83 (dd, J2,3=4.0 Hz, J2,1=3.0 Hz,1H, H-2), 3.61 (m, 1H, H-5), 3.59-3.51 (m, 2H, H-6′, H-6), 1.45-1.43 (m, 2H, CH2), 1.29-1.27 (m, H, CH2), 0.87 (t, J=6.5 Hz, 3H, CH3); 13C-NMR (75 MHz, CD3OD) δ 76.2 (C-3), 74.3 (C-2), 73.1 (C-5), 65.9 (C-6), 63.8 (C-4), 61.6 (C-1), 33.2, 31.2, 31.1, 30.9, 30.6, 28.0, 23.9 (7CH2), 14.6 (CH3).
The antiviral activity of selected iminocyclitols of the present invention was evaluated in the bovine viral diarrhea virus assay (BVDV), see e.g. Mehta, A.; Ouzounov, S.; Jordan, R.; Simsek, E.; Lu, X.; Moriarty, R. M.; Jacob, G.; Dwek, R. A.; Block, T. M. Antivir. Chem. Chemother. 2002, 13(5), 299. The pair of compounds
having only the C1 epimeric C9H19 groups and no alkyl groups on nitrogen both possess IC50 of 1.5 μM and IC90 of 2.2 μM, respectively. These values are superior to N-n-butyl DNJ (IC50=125 μM) and N-n-nonyl DNJ (IC50=10 μM), see e.g. a) Block, T. M.; Lu, X.; Platt, F. M.; Foster, G. R.; Gerlich, W. H.; Blumberg, B. S.; Dwek, R. A. Proc. Natl. Acad. Sci. U.S.A. 1994, 91(6), 2235; b) Branza-Nichita, N.; Durantel, D.; Carrouée-Durantel, S.; Dwek, R. A.; Zitzmann, N. J Virol. 2001, 75(8), 3527; c) Durantel, D.; Branza-Nichita, N.; Carrouée-Durantel, S.; Butters, T. D.; Dwek, R. A.; Zitzmann, N. J Virol. 2001, 75(19), 8987, all incorporated herein by reference in their entirety. The N-alkyl-C-alkyl analogs
(IC50=8.2 μM) in the D-ribo and L-ribitol series, respectively, and were less active relative to the N-desalkyl (NH) 44 and 45. In the L-xylitol series the opposite behavior was observed. The viral activity of compounds
with a) R2=H and R1=C9H19; b) R2=C6H13 and R1=C8H17; c) R2=C8H17 and R1=C8H17; d) R2=R1=C9H19 has been studied. Compounds, 48b-d (48b: IC50=0.37 μM, 48c: IC50=0.4 μM, 48d: IC50=1 μM) are not only more active than 48a (IC50=1 μM), but show very impressive antiviral activity relative to all 1,4-iminocyclitols reported to date. These analogs can be considered good leads and point to the value of the combinatorial application of the exo-imino to endo-iminocyclitol process.
Although the foregoing refers to particular preferred embodiments, it will be understood that the present invention is not so limited. It will occur to those of ordinary skill in the art that various modifications may be made to the disclosed embodiments and that such modifications are intended to be within the scope of the present invention.
All the publications, patent applications and patents cited in this specification are incorporated herein by reference in their entirety.
Claims
1. A method of synthesizing stereochemically defined iminocyclitol comprising
- replacing an intraring oxygen in a cyclic sugar by an intraring imine to form an iminocyclitol, wherein said iminocyclitol has a defined stereochemical configuration different from a stereochemical configuration of the cyclic sugar.
2. The method of claim 1, wherein said replacing an intraring oxygen comprises reacting the cyclic sugar with a reagent comprising NH3.
3. The method of claim 1, wherein the cyclic sugar is an aldopentose in a 4-deoxy 1,4 furanose form, an aldohexose in a 4-deoxy 1,4 furanose form or an aldohexose in a 2,5-dideoxy pyranose form and wherein the cyclic sugar is substituted at the C1 position by R1, wherein R1 is an alkyl group comprising from 1 to 20 carbon atoms.
4. The method of claim 3, further comprising reacting a protected lactone compound with a Grignard reagent R1MgX to form the cyclic sugar, wherein a stereochemical configuration of the protected lactone compound is the same as the stereochemical configuration of the cyclic sugar.
5. The method of claim 4, further comprising protecting hydroxyl groups of an unprotected lactone compound to form the protected lactone compound, wherein a stereochemical configuration of the unprotected lactone compound is the same as the stereochemical configuration of the protected lactone compound.
6. The method of claim 5, wherein the unprotected lactone compound is an aldopentose or an aldohexose in a 4-deoxy 1,4 furanose form and wherein said protecting hydroxyl groups comprises protecting a hydroxyl group on the C5 atom of the unprotected lactone compound with methanesulfonate, tosylate or triflate protective group.
7. The method of claim 5, wherein the unprotected lactone compound is an aldohexose in a 4-deoxy 1,4 furanose form and wherein said protecting hydroxyl groups comprises protecting a hydroxyl group on the C6 atom of the unprotected lactone compound with a trityl or t-butyldimethylsiloxy group.
8. The method of claim 5, wherein the unprotected lactone compound is an aldohexose in a 2,5-dideoxy pyranose form and wherein said protecting hydroxyl groups comprises protecting a hydroxyl group on the C6 atom of the unprotected lactone compound with a methanesulfonate protective group.
9. The method of claim 5, wherein the unprotected lactone compound an aldopentose or an aldohexose in a 4-deoxy 1,4 furanose and wherein said protecting hydroxyl groups comprises protecting a hydroxyl group on the C2 atom and a hydroxyl group on the C3 atom by an isopropyldene.
10. The method of claim 5, wherein the unprotected lactone compound is an aldohexose in a 2,5-dideoxy pyranose form and wherein said protecting hydroxyl groups comprises protecting a hydroxyl group on the C3 atom and a hydroxyl group on the C4 atom by an isopropyldene.
11. The method of claim 5, wherein the unprotected lactone compound is an aldopentose or an aldohexose in a 4-deoxy 1,4 furanose, wherein said protecting hydroxyl groups comprises protecting a hydroxyl group on the C2 atom and a hydroxyl group on the C3 atom by benzyl, t-butyldimethylsiloxy or triphenyl groups.
12. The method of claim 5, wherein the unprotected lactone compound is an aldohexose in a 2,5-dideoxy pyranose form and wherein said protecting hydroxyl groups comprises protecting a hydroxyl group on the C3 atom and a hydroxyl group on the C4 atom by benzyl, t-butyldimethylsiloxy or triphenyl groups.
13. The method of claim 1, further comprising hydrogenating the iminocyclitol to form a hydrogenated iminocyclitol, wherein a stereochemical configuration of the hydrogenated iminocyclitol is the same as the stereochemical configuration of the iminocyclitol.
14. The method of claim 13, wherein hydrogenating the iminocyclitol is carried out in the presence of a catalyst.
15. The method of claim 14, wherein the catalyst comprises Pd/C and acetic acid.
16. The method of claim 13, further comprising aminating the hydrogenated iminocyclitol to form a N-alkyl-C-alkyl iminocyclitol, wherein a stereochemical configuration of the N-alkyl-C-alkyl iminocyclitol is the same as the stereochemical configuration of the hydrogenated iminocyclitol.
17. The method of claim 16, wherein aminating the hydrogenated iminocyclitol comprises reacting the hydrogenated iminocyclitol with an aldehyde R2CHO and the N atom of the N-alkyl-C-alkyl has a substituent group R2CH2, and wherein R2 is hydrogen or an alkyl group comprising from 1 to 20 carbon atoms, and deprotecting C2 and C3 hydroxyl groups of the N-alkyl-C-alkyl iminocyclitol.
18. The method of claim 16, wherein hydrogenating the iminocyclitol, reacting the hydrogenated iminocyclitol with an aldehyde and deprotecting C2 and C3 hydroxyl groups of the N-alkyl-C-alkyl iminocyclitol are carried out simultaneously.
19. A stereochemically defined iminocyclitol compound or a salt thereof, wherein said compound having a formula selected from the group consisting of
- R1 is an alkyl group comprising from 1 to 20 carbon atoms,
- R2 is hydrogen or an alkyl group comprising from 1 to 20 carbon atoms,
- R3 is hydrogen or an alkyl group comprising from 1 to 20 carbon atoms,
- R4 is hydrogen or a first protecting group,
- R5 is hydrogen or a second protecting group,
- R6 is hydrogen or a third protecting group selected from the group consisting of methanesulfonate, tosylate and triflate;
- R7 is hydrogen or a fourth protective group selected from the group consisting of t-butyldimethylsiloxy and tretyl radicals, wherein the first and the second protective form together isopropylidene or cyclohexylidene or are identical protective groups selected from the group consisting of benzyl, t-butyldimethylsiloxy radical and triphenylmethyl.
20. The compound of claim 19 or a salt thereof, wherein a stereochemical configuration of the formula of the compound is and wherein R1, R2 and R6 are as defined in claim 19.
21. The compound of claim 19 or a salt thereof, wherein a stereochemical configuration of the formula is and wherein R1, R2 and R6 are as defined in claim 19.
22. The compound of claim 19 or a salt thereof, wherein a stereochemical configuration of the formula of the compound is wherein R1, R2 and R6 are as defined in claim 19.
23. The compound of claim 19 or a salt thereof, wherein a stereochemical configuration of the formula of the compound is wherein R1, R2 and R6 are as defined in claim 19.
24. The compound of claim 19 or a salt thereof, wherein a stereochemical configuration of the formula of the compound is wherein R1, R2 and R6 are as defined in claim 19.
25. The compound of claim 19 or a salt thereof, wherein a stereochemical configuration of the formula of the compound is wherein R1, R2 and R6 are as defined in claim 19.
26. The compound of claim 19 or a salt thereof, wherein a stereochemical configuration of the formula of the compound is wherein R1, R2 and R6 are as defined in claim 19.
27. The compound of claim 19 or a salt thereof, wherein a stereochemical configuration of the formula of the compound is wherein R1, R2 and R6 are as defined in claim 19.
28. The compound of claim 19 or a salt thereof, wherein a stereochemical configuration of the formula of the compound is wherein R1, R2 and R6 are as defined in claim 19.
29. The compound of claim 19 or a salt thereof, wherein a stereochemical configuration of the formula of the compound is wherein R1, R2, R6 and R7 are as defined in claim 19 and wherein R4 and R5 form together isopropylidene or are hydrogen atoms.
30. The compound of claim 19 or a salt thereof, wherein a stereochemical configuration of the formula of the compound is wherein R1, R2, R6 and R7 are as defined in claim 19 and wherein R4 and R5 form together isopropylidene or are hydrogen atoms.
31. An inhibitor of sugar chain related enzymes comprising the compound of claim 19.
32. A medicine comprising the compound of claim 19.
33. The medicine of claim 32, wherein said medicine is an antiviral agent, an anticancer agent or an immunostimulant agent.
34. A method of treating a viral infection comprising contacting a cell infected with a virus causing the infection with the compound of claim 19.
35. The method of claim 34, wherein the virus is a hepatitis virus.
36. The method of claim 35, wherein the hepatitis virus is a hepatitis B virus.
37. The method of claim 35, wherein the hepatitis virus is a hepatitis C virus.
38. The method of claim 35, wherein the virus is a BVDV virus.
39. The method of claim 34, wherein the contacting the cell comprises administering the compound to a subject containing the cell.
40. The method of claim 39; wherein the subject is a mammal.
41. The method of claim 40, wherein the mammal is a human.
Type: Application
Filed: Sep 1, 2006
Publication Date: Apr 19, 2007
Inventors: Robert Moriarity (Chicago, IL), Carmen Mitan (Bucuresti), Kenneth Phares (Chapel Hill, NC)
Application Number: 11/514,339
International Classification: C07D 211/00 (20060101); C07D 295/00 (20060101);