SITE-SPECIFIC LABELING METHODS AND MOLECULES PRODUCED THEREBY

Abstract

The present invention provides methods of site-specific labeling of antibodies, using proteins having 4′-phosphopantetheinyl transferase activity that catalyze post-translational modification of peptide sequences (“peptide tags”) incorporated into one or more specific sites of an antibody of interest. Enzymatic labeling enables quantitative and irreversible covalent modification of a specific serine residue within the peptide tags incorporated into the antibody, and thus creates desirable antibody conjugates.

Description

FIELD OF THE INVENTION

The present invention relates to site-specific labeling process and molecules produced thereby.

BACKGROUND

Conjugation has been widely used to optimize the properties of biologically active proteins, such as protein therapies, antibody drug conjugates (ADCs), vaccines, tissue selective targeting vehicles, molecular diagnostics, and protein nucleic acid conjugates. Traditional conjugation method utilizes lysine based covalent ligation, which makes it difficult to achieve homogeneity due to the abundance of lysines on the protein's surface.

Site-specific labeling of proteins can be achieved by post-translational enzymatic reactions, for example, using human O⁶-alkylguanine-DNA alkyl-transferase (AGT), biotin ligase, transglutaminase, sortase, cutinase, or 4′-phosphopantetheinyl transferases for the covalent attachment of a label to a protein.

For post-translational enzymatic reactions using human O⁶-alkylguanine-DNA alkyl-transferase, the AGT is fused to a target protein of interest, followed by the addition of a labeled O⁶-benzylguanine, which is a suicide substrate for the AGT (Keppler et al., Nat. Biotechnol. 21:86-89, 2003). This approach is the basis for a technology called SNAP-Tag™, which utilizes a 180 amino acid tag (Tirat et al., International Journal of Biological Macromolecules, 39:66-76, 2006). However, labeling of proteins using this approach occurs only at the C- or N-termini.

For biotin ligation, the enzyme biotin protein ligase (BPL) attaches biotin to the biotin carrier domain of certain carboxylases or decarboxylases. BPL catalyzes, in a two-step, adenosine-5′-triphosphate (ATP)-dependent reaction, the post-translational formation of an amide bond between the carboxyl group of biotin and the ε-amino group of a specific lysine residue located within a highly conserved Ala-Met-Lys-Met recognition located motif within the biotin carrier domain (Tirat et al., International Journal of Biological Macromolecules, 39:66-76, 2006). This approach can be used to create fusion tags at the C-terminus, the N-terminus or even within the target protein and is the basis for a technology called BioEase™ (72 amino acid tag) and AviTag™ (uses the biotin ligase, BirA and 15-residue acceptor peptide tag (AP)).

Transglutaminases catalyze the formation of stable isopeptidic bonds between the side chains of glutamine (Gln) and lysine (Lys) with the loss of ammonia, and have been used to label glutamine side chains in proteins with fluorophores in vitro (Sato et al., Biochemistry 35:13072-13080, 1996). Also, bacterial and human tissue transglutaminases (BTGase and TG2) have been used to catalyze the post-translational modification of different IgG's via the Lys or Gin side chains located in the IgG heavy chain (Mindt et al., Bioconjugate Chem. 19:271-278, 2008; Jeger et al., Angew. Chem. Int. 49:9995-9997, 2010).

Sortases have been used for C-terminal and N-terminal site specific modification of proteins, where sortase A catalyzes the transpeptidation reaction (Antos et al., JACS, 131:10800-10801, 2009).

Cutinase is a 22-kDa serine esterase that forms a site-specific covalent adduct with phosphonate ligands that is resistant to hydrolysis. Cutinases have been used for C-terminal and N-terminal site specific modification of antibodies followed by immobilization onto surfaces (Kwon et al., Anal. Chem. 76:5713-5720, 2004; Hodneland et al., Proc. Natl. Acad. Sci. U.S.A., 99:5048-5052, 2002).

4′-Phosphopantetheinylation of acyl carrier proteins (ACPs) and peptidyl carrier proteins (PCPs) are involved in an essential post-translational modification that is required to activate metabolite synthesis by polyketide synthases (PKSs) and nonribosomal peptide synthetases (NRPSs), respectively (Fischbach et al., Chem. Rev. 106(8):3468-3496, 2006). The apo to holo conversion of ACPs and PCPs is catalyzed by 4′-phosphopantetheine (ppan) transferases, which attach a 4′-phospho-pantetheinyl moiety of coenzyme A (CoA) to an invariant serine residue of the protein domains (Lambalot et al., Chem. Biol. 3(11):923-936, 1996). Due to the comparably small size of the carrier proteins and the ability of 4′-phosphopantetheinyl transferases to accept functionalized CoA analogues as substrates, researchers have used carrier proteins as fusion tags to label target proteins with a variety of small molecule probes (see, e.g., La Clair et al., Chem. Biol. 11(2):195-201, 2004; Yin et al., J. Am. Chem. Soc. 126(25):7754-7755, 2004). In an effort to further reduce the carrier protein tag size, Walsh and co-workers used phage display to identify 8- to 12-residue peptides that are recognized as efficient substrates by the bacterial 4′-phosphopantetheinyl transferase Sfp (previously identified as a genetic locus responsible for surfactin production) and AcpS (Yin et al., Proc. Natl. Acad. Sci. USA 102(44):15815-15820, 2005; Zhou et al., ACS Chem. Biol. 2(5):337-346, 2007; Zhou et al., J. Am. Chem. Soc. 130(30):9925-9930, 2008).

Antibody drug conjugates (ADCs) have been used for the local delivery of cytotoxic agents in the treatment of cancer (see e.g., Lambert, Curr. Opinion In Pharmacology 5:543-549, 2005). ADCs allow targeted delivery of the drug moiety where maximum efficacy with minimal toxicity may be achieved. As more ADCs show promising clinical results, there is an increased need to develop stable engineered antibodies that provide reactive groups capable of conjugation to various agents, especially site-specific conjugations that can generate homogeneous immunoconjugates with a defined drug-to-antibody ratio for use in cancer therapy.

SUMMARY

The present invention provides modified antibodies or an antigen binding fragments thereof, which comprise at least one peptide tag that is a substrate of 4′-phosphopantetheinyl transferase, and is located within the structural loop of said antibodies or antigen binding fragments. The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments, and a terminal group. The present invention also provides methods of making such modified antibodies, antigen binding fragments, and the immunoconjugates, as well as methods of using such compositions.

In some embodiments, the present invention provides modified antibodies or an antigen binding fragments thereof, which comprise at least one peptide tag that is a substrate of 4′-phosphopantetheinyl transferase, and is located within the structural loop of said antibodies or antigen binding fragments, and wherein the 4′-phosphopantetheinyl transferase is Sfp, AcpS, T. maritima PPTase, human PPTase or a mutant or homolog form thereof that retains the 4′-phosphopantetheinyl transferase activity. In some embodiments, the peptide tag is selected from the group consisting of: GDSLSWLLRLLN (SEQ ID NO: 1), GDSLSWL (SEQ ID NO: 2), GDSLSWLVRCLN (SEQ ID NO: 3), GDSLSWLLRCLN (SEQ ID NO: 4), GDSLSWLVRLLN (SEQ ID NO: 5), GDSLSWLLRSLN (SEQ ID NO: 6), GSQDVLDSLEFIASKLA (SEQ ID NO: 7), VLDSLEFIASKLA (SEQ ID NO: 8), DSLEFIASKLA (SEQ ID NO: 9), GDSLDMLEWSLM (SEQ ID NO: 10), GDSLDMLEWSL (SEQ ID NO: 11), GDSLDMLEWS (SEQ ID NO: 12), GDSLDMLEW (SEQ ID NO: 13), DSLDMLEW (SEQ ID NO: 14), GDSLDM (SEQ ID NO: 15), LDSVRMMALAAR (SEQ ID NO: 16), LDSLDMLEWSLR (SEQ ID NO: 17), DSLEFIASKL (SEQ ID NO: 18), DSLEFIASK (SEQ ID NO: 19), DVLDSLEFI (SEQ ID NO: 20), and VLDSLEFIAS (SEQ ID NO: 21). The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments thereof.

In some embodiments, The present invention provides modified antibodies or antigen binding fragments thereof, which comprise at least one peptide tag that is a substrate of 4′-phosphopantetheinyl transferase, and is located within the structural loop of VH, VL, CH1, CH2, CH3, or C_L region of the antibody or antigen binding fragment thereof. In some embodiments, the peptide tag is inserted between any two amino acids that are listed in Table 1. In some embodiments, the present invention provides modified antibodies or antigen binding fragments comprising at least one peptide tag that is a substrate of 4′-phosphopantetheinyl transferase, and is located within the structural loop of the CH1 region of an antibody or antigen binding fragment thereof. The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments thereof.

In some embodiments, the peptide tag is inserted between amino acid residues 2 and 3 of the V_H or V_L domain, or between amino acid residues 63 and 64 of the V_H domain, or between 64 and 65 of the V_H domain, or between 138 and 139 of the CH1 domain, or between 197 and 198 of the CH1 domain, or between 359 and 360 of the CH3 domain, or between 388 and 389 of the CH3 domain, or after 447 of the CH3 domain of a parental antibody or antigen binding fragment thereof. The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments thereof.

In some embodiments, the peptide tag is inserted between amino acid residues 2 and 3 of the VH or VL domain, or between amino acid residue 110 and 111 of the light chain, or between 119 and 120, or between 120 and 121, or between 135 and 136, or between 136 and 137, or between 138 and 139, or between 164 and 165, or between 165 and 166, or between 194 and 195 of the CH1 domain, or between 388 and 389, or between 445 and 446, or between 446 and 447 of the CH3 domain of a parental antibody or antigen binding fragment thereof. The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments thereof.

In some embodiments, the peptide tag is inserted between amino acid residue 110 and 111 of the light chain, or between 119 and 120, or between 120 and 121, or between 135 and 136, or between 136 and 137, or between 138 and 139, or between 165 and 166 of the CH1 domain, or between 388 and 389 of the CH3 domain of a parental antibody or antigen binding fragment thereof. The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments thereof.

In some embodiments, the peptide tag is grafted between amino acid residues 62 to 64 or 62 to 65 of the V_H domain, or between amino acid residues 133 and 138 of the CH1 domain, or between 189 and 195 of the CH1 domain, or between 190 and 197 of the CH1 domain. The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments thereof.

In some embodiments, the present invention provides modified antibodies or an antigen binding fragments comprising SEQ ID NO: 103, SEQ ID NO: 109, SEQ ID NO:113, SEQ ID NO:121, SEQ ID NO:122, SEQ ID NO:127, SEQ ID NO:129, SEQ ID NO:130, SEQ ID NO:131, and/or SEQ ID NO:141. The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments thereof.

In some embodiments, the present invention provides modified antibodies or antigen binding fragments comprising SEQ ID NO:26, SEQ ID NO:27, SEQ ID NO:32, SEQ ID NO:63, SEQ ID NO:94, SEQ ID NO:95, SEQ ID NO:96, SEQ ID NO:126, SEQ ID NO:127, SEQ ID NO:129, SEQ ID NO:130, SEQ ID NO:131, SEQ ID NO:132, SEQ ID NO:139, SEQ ID NO:149, SEQ ID NO:151, SEQ ID NO:152, SEQ ID NO:157, SEQ ID NO:158, SEQ ID NO:160, SEQ ID NO:168, SEQ ID NO:169, SEQ ID NO:178, SEQ ID NO:248, SEQ ID NO:250, SEQ ID NO:251, SEQ ID NO:256, SEQ ID NO:257, SEQ ID NO:259, SEQ ID NO:267, SEQ ID NO:268, SEQ ID NO:277, SEQ ID NO:348, SEQ ID NO:349, SEQ ID NO:356, SEQ ID NO:358, SEQ ID NO:359, SEQ ID NO:364, SEQ ID NO:365, SEQ ID NO:367, SEQ ID NO:373, SEQ ID NO:374, SEQ ID NO:380, SEQ ID NO:384, SEQ ID NO:386, SEQ ID NO:387, or SEQ ID NO:388. The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments thereof.

In some embodiments, the present invention provides modified antibodies or antigen binding fragments comprising SEQ ID NO:32, SEQ ID NO:63, SEQ ID NO:127, SEQ ID NO:129, SEQ ID NO:132, SEQ ID NO:151, SEQ ID NO:152, SEQ ID NO:157, SEQ ID NO:158, SEQ ID NO:160, SEQ ID NO:169, SEQ ID NO:250, SEQ ID NO:251, SEQ ID NO:256, SEQ ID NO:257, SEQ ID NO:259, SEQ ID NO:268, SEQ ID NO:358, SEQ ID NO:359, SEQ ID NO:364, SEQ ID NO:365, SEQ ID NO:367, SEQ ID NO:374, or SEQ ID NO:384. The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments thereof.

In one embodiment, the present invention provides modified antibodies or an antigen binding fragments thereof, which comprise at least one peptide tag that is a substrate of Sfp, and is located within the structural loop of said antibodies or antigen binding fragments, and wherein the peptide tag is GDSLSWLLRLLN (SEQ ID NO:1), GDSLSWLVRCLN (SEQ ID NO:3), GDSLSWLLRCLN (SEQ ID NO:4), GDSLSWLVRLLN (SEQ ID NO:5), GDSLSWLLRSLN (SEQ ID NO:6), GSQDVLDSLEFIASKLA (SEQ ID NO:7), VLDSLEFIASKLA (SEQ ID NO:8), DSLEFIASKLA (SEQ ID NO:9), GDSLDMLEWSLM (SEQ ID NO:10), GDSLDMLEWSL (SEQ ID NO:11), GDSLDMLEWS (SEQ ID NO:12), GDSLDMLEW (SEQ ID NO:13), DSLDMLEW (SEQ ID NO:14), LDSLDMLEWSLR (SEQ ID NO:17), DSLEFIASKL (SEQ ID NO:18), DSLEFIASK (SEQ ID NO:19), or DSLEFIAS (SEQ ID NO:22). In another embodiment, the peptide tag is GDSLSWLLRLLN (SEQ ID NO:1), GDSLSWL (SEQ ID NO:2), DSLEFIASKLA (SEQ ID NO:9), GDSLDMLEWSLM (SEQ ID NO:10), DSLEFIASKL (SEQ ID NO:18), or DSLEFIASK (SEQ ID NO:19). The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments thereof.

In some embodiments, the modified antibodies or antigen binding fragments of the invention are an isotype selected from IgG, IgM, IgE and IgA. In some other embodiments, the modified antibodies or antigen binding fragments of the invention are a subtype of IgG selected from IgG1, IgG2, IgG3 and IgG4. In some embodiments, the modified antibodies or antigen binding fragments of the invention are a human or humanized antibody or antigen binding fragment. In a specific embodiment, the modified antibody or antigen binding fragment of the invention is an anti-HER2 antibody or anti-HER2 antibody fragment. The present invention further provides immunoconjugates comprising such modified antibodies or antigen binding fragments thereof.

The present invention provides nucleic acids encoding the modified antibodies or antigen binding fragments described herein, and host cells comprising such nucleic acids.

The present invention provides immunoconjugates comprising a modified antibody or an antigen binding fragment thereof, and a terminal group, wherein the modifice antibody or antigen binding fragment comprises at least one peptide tag that is a substrate of 4′-phosphopantetheinyl transferase, and is located within the structural loop of the antibody or antigen binding fragment. In some embodiments, the modified antibody or antigen binding fragment further comprises one or more orthogonal conjugation sites. In a specific embodiment, each orthogonal conjugation site is independently selected from a substrate of Sfp 4′-phosphopantetheinyl transferase, a substrate of AcpS 4′-phosphopantetheinyl transferase, a lysine, a cysteine, a tyrosine, a histidine, a formyl glycine, an unnatural amino acid, pyrrolysine and pyrroline-carboxylysine.

Another aspect provided herein are immunoconjugates comprising a modified antibody or antigen binding fragment, and a terminal group (TG) attached to the peptide tag in the modified antibody or antigen binding fragment by a linker having the structure according to Formula (I-b):

wherein:

• • L₁ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker; an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker;
  • L₂ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker; an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker;
  • L₃ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker; an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker;
  • L₄ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker; an enzymatically cleavable linker, a photo stable linker, a photo-cleavable linker or a self-immolative spacer,
  • the * denotes where the 4′-phosphopantetheinyl moiety is attached to the peptide tag,
  • and wherein the terminal group is a drug moiety, an affinity probe, a chelator, a spectroscopic probe, a radioactive probe, an imaging reagent, a lipid molecule, a polyethylene glycol, a polymer, a nanoparticle, a quantum dot, a liposome, a PLGA particle, a polysaccharide, an acetyl group, or a surface.

In certain embodiments of such immunoconjugates:

• • L₁ is -A₁X²— or —X²—; L₂ is a bond, -A₂-, or -A₂X²—;
  • L₃ is a bond, -A₃-, or -A₃X²—;
  • L₄ is a bond, -A₄-, -A₄X²—,

• • A₁ is —C(═O)NH—, —NHC(═O)—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, (O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, or —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;
  • A₂ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NR⁴—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nS—, —(C(R⁴)₂)_nS—, —S(CH₂)_n—, —S(C(R⁴)₂)_n—, —(CH₂)_nNH—, —(C(R⁴)₂)_nNH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)NH(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)NH(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—,

• • A₃ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nS—, —(C(R⁴)₂)_nS—, —S(CH₂)_n—, —S(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)NH(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)NH(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)—, —(CH₂)_n(O(CH₂)_n)_mC(═O)—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mC(═O)—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, H or

• • A₄ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, or —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;
  • each X² is independently selected from a bond,

—S—, —S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• • each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
  • each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
  • each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
  • R⁷ is independently selected from H, phenyl and pyridine;
  • R⁸ is independently selected from

• • R⁹ is independently selected from H and C_1-6haloalkyl;
  • each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
  • each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9.
    In other embodiments of such immunoconjugates:
  • L₁ is -A₁X²— or —X²—;
  • L₂ is a bond, -A₂-, or -A₂X²—;
  • L₃ is a bond, -A₃-, or -A₃X²—;
  • L₄ is a bond, -A₄-, -A₄X²—,

• • A₁ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)NHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
  • A₂ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)NHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n— or

• • A₃ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)NHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n— or

• • A₄ is —C(═O)NH—, —C(═O)NH(CH₂)—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)NHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
  • each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• • each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
  • each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
  • each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
  • R⁷ is independently selected from H, phenyl and pyridine;
  • R⁸ is independently selected from

• • R⁹ is independently selected from H and C_1-6haloalkyl;
  • each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
  • each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9.
    In certain embodiments of such aforementioned immunoconjugates, the linker of Formula (I-b) is a linker having the structure according to Formula (I-c):

In other embodiments of such aforementioned immunoconjugates:

• • L₁ is -A₁X²—, where A¹ is —C(═O)NH(CH₂)_nS— and X² is

• • L₂ is a bond; L₃ is a bond, and L₄ is -A₄- wherein A₄ is —(CH₂)_nNHC(═O)—.
    In other embodiments of such aforementioned immunoconjugates:
  • L₁ is -A₁X²—, wherein A₁ is —C(═O)NH(CH₂)_nS— and X² is

• • L₂ is a bond; L₃ is a bond; L₄ is -A₄-, wherein A₄ is —(CH₂)_nC(═O)—.
    In other embodiments of such immunoconjugates:
  • L₁ is -A₁X²—, wherein A₁ is —C(═O)NH(CH₂)_nS— and X² is

• • L₂ is -A₂-, wherein A₂ is —(CH₂)_nC(═O;
  • L₃ is -A₃-, wherein A₃ is

and

• • L₄ is

In other embodiments of such aforementioned immunoconjugates:

• • L₁ is a -A₁X²—, wherein A₁ is —C(═O)NH(CH₂)_nS— and X² is —(CH₂)_nC(═O)NH—;
  • L₂ is a bond-; L₃ is -A₃-, wherein A₃ is —(CH₂)_nC(═O)—, and L₄ is a bond.
    In other embodiments of such aforementioned immunoconjugates:
  • L₁ is a -A₁X²—, wherein A₁ is —C(═O)NH(CH₂)_nS—, X² is —CHR⁴(CH₂)_nC(═O)NH— and R⁴ is —C(═O)OH;
  • L₂ is a bond; L₃ is -A₃-, wherein A₃ is —(CH₂)_nC(═O)— and. L₄ is a bond.
    In other embodiments of such aforementioned immunoconjugates:
  • L₁ is -A₁X²—, where A₁ is —C(═O)NH(CH₂)_nS— and X² is —(CH₂)_nC(═O)NH—;
  • L₂ is a bond; L₃ is a bond, and L₄ is -A₄- wherein A₄ is —(CH₂)_nNHC(═O)—.
    In other embodiments of such aforementioned immunoconjugates:
  • L₁ is -A₁X²—, wherein A₁ is —C(═O)NH(CH₂)_nS— and X² is —(CH₂)_nC(═O)NH—;
  • L₂ is a bond; L₃ is a bond; L₄ is -A₄-, wherein A₄ is —(CH₂)_nC(═O)—.
    In other embodiments of such aforementioned immunoconjugates:
  • L₁ is -A₁X²—, wherein A₁ is —C(═O)NH(CH₂)_nS— and X² is —(CH₂)_nC(═O)NH—;
  • L₂ is -A₂-, wherein A₂ is —(CH₂)_nC(═O;
  • L₃ is -A₃-, wherein A₃ is

and

• • L₄ is

In other embodiments of such aforementioned immunoconjugates:

• • L₁ is a -A₁X²—, wherein A₁ is —C(═O)NH(CH₂)_nS— and X² is —(CH₂)_nC(═O)NH—;
  • L₂ is a bond-; L₃ is -A₃-, wherein A₃ is —(CH₂)_nC(═O)—, and L₄ is a bond.
    In other embodiments of such aforementioned immunoconjugates:
  • L₁ is a -A₁X²—, wherein A₁ is —C(═O)NH(CH₂)_nS—, X² is —CHR⁴(CH₂)_nC(═O)NH— and R⁴ is —C(═O)OH;
  • L₂ is a bond; L₃ is -A₃-, wherein A₃ is —(CH₂)_nC(═O)— and. L₄ is a bond.

In the embodiments of the aforementioned immunoconjugates the terminal group is a drug moiety selected from an anti-inflammatory agent, an anticancer agent, an antifungal agent, an antibacterial agent, an anti-parasitic agent, an anti-viral agent and an anesthetic agent. In certain embodiments of such immunoconjugates the drug moiety is selected from a V-ATPase inhibitor, a HSP90 inhibitor, an IAP inhibitor, an mTor inhibitor, a microtubule stabilizer, a microtubule destabilizers, an auristatin, a dolastatin, a maytansinoid, a MetAP (methionine aminopeptidase), an inhibitor of nuclear export of proteins CRM1, a DPPIV inhibitor, an inhibitors of phosphoryl transfer reactions in mitochondria, a protein synthesis inhibitor, a CDK2 inhibitor, a CDK9 inhibitor, an EG5 inhibitor, an HDAC inhibitor, a DNA damaging agent, a DNA alkylating agent, a DNA intercalator, a DNA minor groove binder, a proteasome inhibitor, and a DHFR inhibitor. In certain embodiments of such immunoconjugates the spectroscopic probe is selected from a fluorophore, a chromophore, a quantum dot, a magnetic probe, a radioactive probe, an imaging reagent, or a contrast reagent. In certain embodiments of such immunoconjugates the affinity probe is biotin.

Another aspect provided herein is the preparation of an immunoconjugate by a process comprising the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof, wherein the modified antibody or antigen binding fragment comprises a peptide tag, and wherein the peptide tag is a substrate of an enzyme having phosphopantetheinyl transferase activity, and
  • (b) labeling the modified antibody or antigen binding fragment with a terminal group by incubating the modified antibody or antigen binding fragment thereof with an enzyme having phosphopantetheinyl transferase activity in the presence of a coenzyme A analog having the structure of Formula B:

• • • wherein L₁, L₂, L₃, L₄, R₂ and TG are as defined herein;
    • thereby the terminal group is attached to the peptide tag by a linker having the structure according to Formula (I-b):

• • where the * denotes the phosphopantetheinyl moiety is attached to the peptide tag.
    In certain embodiments the compound of Formula (B) is selected from

Another aspect provided herein is the preparation of an immunoconjugate by a process comprising the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof, wherein the a modified antibody or antigen binding fragment thereof, comprises a peptide tag, and wherein the peptide tag is a substrate of an enzyme having phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof, with a terminal group (TG) by
    • i) incubating the modified antibody or antigen binding fragment thereof, with an enzyme having phosphopantetheinyl transferase activity in the presence of a compound of Formula (D),

• • • • thereby attaching an activated phosphopentathienyl group of Formula (D-a) to the peptide tag,

• • • • wherein R₁ is a functional group;
    • and
    • ii) reacting the functional group R₁ of the activated phosphopentathienyl group with a compound of Formula (II-a),

X-L₂-L₃-L₄-TG   Formula (II-a)

• • • • wherein X is a group which reacts with functional group R₁,
      • wherein:
        • when X is a thiol, then R₁ is a thiol, a maleimide or a haloacetamide; or,
        • when X is a an azide, then R₁ is an alkyne, a triaryl phosphine, a cyclooctene or an oxanobornadiene; or,
        • when X is a a triaryl phosphine, then R₁ is an azide; or,
        • when X is a an oxanobornadiene, then R₁ is an azide; or,
        • when X is a an alkyne, then R₁ is an azide; or,
        • when X is a an alkene, then R₁ is an azide; or,
        • when X is a a cyclooctene, then R₁ is a diaryl tetrazine; or,
        • when X is a a diaryl tetrazine, then R₁ is a cyclooctene; or,
        • when X is a a monoaryl tetrazine, then R₁ is a norbornene; or,
        • when X is a a norbornene, then R₁ is a monoaryl tetrazine; or,
        • when X is a an aldehyde, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
        • when X is a a ketone, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
        • when X is a a hydroxylamine, then R₁ is an aldehyde or a ketone; or,
        • when X is a a hydrazine, then R₁ is an aldehyde or a ketone; or,
        • when X is a NH₂—NH—C(═O)—, then R₁ is an aldehyde or a ketone; or,
        • when X is a a haloacetamide, then R₁ is a thiol; or,
        • when X is a a maleimide, then R₁ is a thiol;
  • thereby the terminal group is attached to the peptide tag by a linker having the structure according to Formula (III-b):

• • where the * denotes the phosphopantetheinyl moiety is attached to the peptide tag, and wherein A₁, X₂, L₂, L₃, L₄, R₂ and TG are as defined herein.
    Another aspect provided herein is the preparation of an immunoconjugate by a process comprising the steps of:
  • (a) providing a modified antibody or antigen binding fragment thereof, wherein the modified antibody or antigen binding fragment thereof comprises a peptide tag, and wherein the peptide tag is a substrate of an enzyme having phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof with a terminal group (TG)
    • i) by incubating the modified antibody or antigen binding fragment thereof with an enzyme having phosphopantetheinyl transferase activity in the presence of a compound of Formula (E),

• • • • thereby attaching an activated phosphopentathienyl group of Formula (E-a) to the peptide tag,

• • • • wherein R₁ is a functional group;
    • and
    • ii) reacting the functional group R₁ of the activated phosphopentathienyl group with a compound of Formula (II-c),

X-L₃-L₄-TG   Formula (II-c)

• • • • wherein X is a group which reacts with functional group R₁,
      • wherein:
        • when X is a thiol, then R₁ is a thiol, a maleimide or a haloacetamide; or,
        • when X is a an azide, then R₁ is an alkyne, a triaryl phosphine, a cyclooctene or an oxanobornadiene; or,
        • when X is a a triaryl phosphine, then R₁ is an azide; or,
        • when X is a an oxanobornadiene, then R₁ is an azide; or,
        • when X is a an alkyne, then R₁ is an azide; or,
        • when X is a an alkene, then R₁ is an azide; or,
        • when X is a a cyclooctene, then R₁ is a diaryl tetrazine; or,
        • when X is a a diaryl tetrazine, then R₁ is a cyclooctene; or,
        • when X is a a monoaryl tetrazine, then R₁ is a norbornene; or,
        • when X is a a norbornene, then R₁ is a monoaryl tetrazine; or,
        • when X is a an aldehyde, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
        • when X is a a ketone, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
        • when X is a a hydroxylamine, then R₁ is an aldehyde or a ketone; or,
        • when X is a a hydrazine, then R₁ is an aldehyde or a ketone; or,
        • when X is a NH₂—NH—C(═O)—, then R₁ is an aldehyde or a ketone; or,
        • when X is a a haloacetamide, then R₁ is a thiol; or,
        • when X is a a maleimide, then R₁ is a thiol;
  • thereby the terminal group is attached to the peptide tag by a linker having the structure according to Formula (II-d):

• • where the * denotes the phosphopantetheinyl moiety is attached to the peptide tag, and wherein L₁, A₂, X₂, L₃, L₄, R₂ and TG are as defined herein.
    Another aspect provided herein is the preparation of an immunoconjugate by a process comprising the steps of:
  • (a) providing a modified antibody or antigen binding fragment thereof, wherein the modified antibody or antigen binding fragment thereof comprises a peptide tag, and wherein the peptide tag is a substrate of an enzyme having phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof with a terminal group (TG)
    • i) by incubating the modified antibody or antigen binding fragment thereof with an enzyme having phosphopantetheinyl transferase activity in the presence of a compound of Formula (F),

• • • • thereby attaching an activated phosphopentathienyl group of Formula (F-a) to the peptide tag,

• • • • wherein R₁ is a functional group;
      • and
    • ii) reacting the functional group R₁ of the activated phosphopentathienyl group with a compound of Formula (II-e),

X-L₄-TG   Formula (II-e)

• • • • wherein X is a group which reacts with functional group R₁,
      • wherein:
        • when X is a thiol, then R₁ is a thiol, a maleimide or a haloacetamide; or,
        • when X is a an azide, then R₁ is an alkyne, a triaryl phosphine, a cyclooctene or an oxanobornadiene; or,
        • when X is a a triaryl phosphine, then R₁ is an azide; or,
        • when X is a an oxanobornadiene, then R₁ is an azide; or,
        • when X is a an alkyne, then R₁ is an azide; or,
        • when X is a an alkene, then R₁ is an azide; or,
        • when X is a a cyclooctene, then R₁ is a diaryl tetrazine; or,
        • when X is a a diaryl tetrazine, then R₁ is a cyclooctene; or,
        • when X is a a monoaryl tetrazine, then R₁ is a norbornene; or,
        • when X is a a norbornene, then R₁ is a monoaryl tetrazine; or,
        • when X is a an aldehyde, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
        • when X is a a ketone, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
        • when X is a a hydroxylamine, then R₁ is an aldehyde or a ketone; or,
        • when X is a a hydrazine, then R₁ is an aldehyde or a ketone; or,
        • when X is a NH₂—NH—C(═O)—, then R₁ is an aldehyde or a ketone; or,
        • when X is a a haloacetamide, then R₁ is a thiol; or,
        • when X is a a maleimide, then R₁ is a thiol;
  • thereby the terminal group is attached to the peptide tag by a linker having the structure according to Formula (III-f):

• • where the * denotes the phosphopantetheinyl moiety is attached to the peptide tag, and wherein L₁, L₂, A₃, X₂, L₄, R₂ and TG are as defined herein.
    Another aspect provided herein is the preparation of an immunoconjugate by a process comprising the steps of:
  • (a) providing a modified antibody or antigen binding fragment thereof, wherein the modified antibody or antigen binding fragment thereof comprises a peptide tag, and wherein the peptide tag is a substrate of an enzyme having phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof with a terminal group (TG)
    • i) by incubating the modified antibody or antigen binding fragment thereof with an enzyme having phosphopantetheinyl transferase activity in the presence of a compound of Formula (G),

• • • • thereby attaching an activated phosphopentathienyl group of Formula (G-a) to the peptide tag,

• • • • wherein R₁ is a functional group;
      • and
    • ii) reacting the functional group R₁ of the activated phosphopentathienyl group with a compound of Formula (II-g),

X-TG   Formula (II-g)

• • • • wherein X is a group which reacts with functional group R₁, wherein:
        • when X is a thiol, then R₁ is a thiol, a maleimide or a haloacetamide; or,
        • when X is a an azide, then R₁ is an alkyne, a triaryl phosphine, a cyclooctene or an oxanobornadiene; or,
        • when X is a a triaryl phosphine, then R₁ is an azide; or,
        • when X is a an oxanobornadiene, then R₁ is an azide; or,
        • when X is a an alkyne, then R₁ is an azide; or,
        • when X is a an alkene, then R₁ is an azide; or,
        • when X is a a cyclooctene, then R₁ is a diaryl tetrazine; or,
        • when X is a a diaryl tetrazine, then R₁ is a cyclooctene; or,
        • when X is a a monoaryl tetrazine, then R₁ is a norbornene; or,
        • when X is a a norbornene, then R₁ is a monoaryl tetrazine; or,
        • when X is a an aldehyde, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
        • when X is a a ketone, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
        • when X is a a hydroxylamine, then R₁ is an aldehyde or a ketone; or,
        • when X is a a hydrazine, then R₁ is an aldehyde or a ketone; or,
        • when X is a NH₂—NH—C(═O)—, then R₁ is an aldehyde or a ketone; or,
        • when X is a a haloacetamide, then R₁ is a thiol; or,
        • when X is a a maleimide, then R₁ is a thiol;
  • thereby the terminal group is attached to the peptide tag by a linker having the structure according to Formula (III-h):

• • where the * denotes the phosphopantetheinyl moiety is attached to the peptide tag, and wherein L₁, L₂, L₃, A₄, X₂, R₂ and TG are as defined herein.
    Another aspect provided herein is the preparation of an immunoconjugate by a process comprising the steps of:
  • (a) providing a modified antibody or antigen binding fragment thereof, wherein the modified antibody or antigen binding fragment thereof comprises a peptide tag, and wherein the peptide tag is a substrate of an enzyme having phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof with a terminal group (TG) by incubating the modified antibody or antigen binding fragment thereof with an enzyme having phosphopantetheinyl transferase activity in the presence of a compound of Formula (H),

• • • thereby attaching a protected phosphopentathienyl group of Formula (H-a) to the peptide tag,

• • • wherein R₁-PG is a protected functional group R₁;
  • (c) deprotecting the protected phosphopentathienyl group to give an activated phosphopentathienyl group of Formula (D-a) attached to the peptide tag,

• • • wherein R₁ is a functional group;
  • and
  • (d) reacting the functional group R₁ of the activated phosphopentathienyl group with a compound of Formula (III-a),

X-L₂-L₃-L₄-TG   Formula (II-a)

• • • wherein X is a group which reacts with functional group R₁, wherein:
      • when X is a thiol, then R₁ is a thiol, a maleimide or a haloacetamide; or,
      • when X is a an azide, then R₁ is an alkyne, a triaryl phosphine, a cyclooctene or an oxanobornadiene; or,
      • when X is a a triaryl phosphine, then R₁ is an azide; or,
      • when X is a an oxanobornadiene, then R₁ is an azide; or,
      • when X is a an alkyne, then R₁ is an azide; or,
      • when X is a an alkene, then R₁ is an azide; or,
      • when X is a a cyclooctene, then R₁ is a diaryl tetrazine; or,
      • when X is a a diaryl tetrazine, then R₁ is a cyclooctene; or,
      • when X is a a monoaryl tetrazine, then R₁ is a norbornene; or,
      • when X is a a norbornene, then R₁ is a monoaryl tetrazine; or,
      • when X is a an aldehyde, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
      • when X is a a ketone, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
      • when X is a a hydroxylamine, then R₁ is an aldehyde or a ketone; or,
      • when X is a a hydrazine, then R₁ is an aldehyde or a ketone; or,
      • when X is a NH₂—NH—C(═O)—, then R₁ is an aldehyde or a ketone; or,
      • when X is a a haloacetamide, then R₁ is a thiol; or,
      • when X is a a maleimide, then R₁ is a thiol; thereby the terminal group is attached to the peptide tag by a linker having the structure according to Formula (II-b):

• • where the * denotes the phosphopantetheinyl moiety is attached to the peptide tag, and wherein A₁, X₂, L₂, L₃, L₄, R₂, PG and TG are as defined herein.
    Another aspect provided herein is the preparation of an immunoconjugate by a process comprising the steps of:
  • (a) providing a modified antibody or antigen binding fragment thereof, wherein the modified antibody or antigen binding fragment thereof comprises a peptide tag, and wherein the peptide tag is a substrate of an enzyme having phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof with a terminal group (TG) by incubating the modified antibody or antigen binding fragment thereof with an enzyme having phosphopantetheinyl transferase activity in the presence of a compound of Formula (J),

• • • thereby attaching a protected phosphopentathienyl group of Formula (J-a) to the peptide tag,

• • • wherein R₁—PG is a protected functional group R₁;
  • (c) deprotecting the protected phosphopentathienyl group to give an activated phosphopentathienyl group of Formula (E-a) attached to the peptide tag,

• • • wherein R₁ is a functional group;
  • and
  • (d) reacting the functional group R₁ of the activated phosphopentathienyl group with a compound of Formula (III-c),

X-L₃-L₄-TG   Formula (II-c)

• • • wherein X is a group which reacts with functional group R₁, wherein:
      • when X is a thiol, then R₁ is a thiol, a maleimide or a haloacetamide; or,
      • when X is a an azide, then R₁ is an alkyne, a triaryl phosphine, a cyclooctene or an oxanobornadiene; or,
      • when X is a a triaryl phosphine, then R₁ is an azide; or,
      • when X is a an oxanobornadiene, then R₁ is an azide; or,
      • when X is a an alkyne, then R₁ is an azide; or,
      • when X is a an alkene, then R₁ is an azide; or,
      • when X is a a cyclooctene, then R₁ is a diaryl tetrazine; or,
      • when X is a a diaryl tetrazine, then R₁ is a cyclooctene; or,
      • when X is a a monoaryl tetrazine, then R₁ is a norbornene; or,
      • when X is a a norbornene, then R₁ is a monoaryl tetrazine; or,
      • when X is a an aldehyde, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
      • when X is a a ketone, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
      • when X is a a hydroxylamine, then R₁ is an aldehyde or a ketone; or,
      • when X is a a hydrazine, then R₁ is an aldehyde or a ketone; or,
      • when X is a NH₂—NH—C(═O)—, then R₁ is an aldehyde or a ketone; or,
      • when X is a a haloacetamide, then R₁ is a thiol; or,
      • when X is a a maleimide, then R₁ is a thiol;
  • thereby the terminal group is attached to the peptide tag by a linker having the structure according to Formula (II-d):

• • where the * denotes the phosphopantetheinyl moiety is attached to the peptide tag, and wherein L₁, A₂, X₂, L₃, L₄, R₂, PG and TG are as defined herein.
    Another aspect provided herein is the preparation of an immunoconjugate by a process comprising the steps of:
  • (a) providing a modified antibody or antigen binding fragment thereof, wherein the modified antibody or antigen binding fragment thereof comprises a peptide tag, and wherein the peptide tag is a substrate of an enzyme having phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof with a terminal group (TG) by incubating the modified antibody or antigen binding fragment thereof with an enzyme having phosphopantetheinyl transferase activity in the presence of a compound of Formula (K),

• • • thereby attaching a protected phosphopentathienyl group of Formula (J-a) to the peptide tag,

• • • wherein R₁—PG is a protected functional group R₁;
  • (c) deprotecting the protected phosphopentathienyl group to give an activated phosphopentathienyl group of Formula (F-a) attached to the peptide tag,

• • • wherein R₁ is a functional group;
  • and
  • (d) reacting the functional group R₁ of the activated phosphopentathienyl group with a compound of Formula (II-e),

X-L₄-TG   Formula (II-e)

• • • wherein X is a group which reacts with functional group R₁, wherein:
      • when X is a thiol, then R₁ is a thiol, a maleimide or a haloacetamide; or,
      • when X is a an azide, then R₁ is an alkyne, a triaryl phosphine, a cyclooctene or an oxanobornadiene; or,
      • when X is a a triaryl phosphine, then R₁ is an azide; or,
      • when X is a an oxanobornadiene, then R₁ is an azide; or,
      • when X is a an alkyne, then R₁ is an azide; or,
      • when X is a an alkene, then R₁ is an azide; or,
      • when X is a a cyclooctene, then R₁ is a diaryl tetrazine; or,
      • when X is a a diaryl tetrazine, then R₁ is a cyclooctene; or,
      • when X is a a monoaryl tetrazine, then R₁ is a norbornene; or,
      • when X is a a norbornene, then R₁ is a monoaryl tetrazine; or,
      • when X is a an aldehyde, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
      • when X is a a ketone, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
      • when X is a a hydroxylamine, then R₁ is an aldehyde or a ketone; or,
      • when X is a a hydrazine, then R₁ is an aldehyde or a ketone; or,
      • when X is a NH₂—NH—C(═O)—, then R₁ is an aldehyde or a ketone; or,
      • when X is a a haloacetamide, then R₁ is a thiol; or,
      • when X is a a maleimide, then R₁ is a thiol;
  • thereby the terminal group is attached to the peptide tag by a linker having the structure according to Formula (III-f):

• • where the * denotes the phosphopantetheinyl moiety is attached to the peptide tag, and wherein L₁, L₂, A₃, X₂, L₄, R₂, PG and TG are as defined herein.
    Another aspect provided herein is the preparation of an immunoconjugate by a process comprising the steps of:
  • (a) providing a modified antibody or antigen binding fragment thereof, wherein the modified antibody or antigen binding fragment thereof comprises a peptide tag, and wherein the peptide tag is a substrate of an enzyme having phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof with a terminal group (TG) by incubating the modified antibody or antigen binding fragment thereof with an enzyme having phosphopantetheinyl transferase activity in the presence of a compound of Formula (L),

• • • thereby attaching a protected phosphopentathienyl group of Formula (L-a) to the peptide tag,

• • • wherein R₁—PG is a protected functional group R₁;
  • (c) deprotecting the protected phosphopentathienyl group to give an activated phosphopentathienyl group of Formula (G-a) attached to the peptide tag,

• • • wherein R₁ is a functional group;
  • and
  • (d) reacting the functional group R₁ of the activated phosphopentathienyl group with a compound of Formula (II-g),

X-TG   Formula (II-g)

• • • wherein X is a group which reacts with functional group R₁, wherein:
      • when X is a thiol, then R₁ is a thiol, a maleimide or a haloacetamide; or,
      • when X is a an azide, then R₁ is an alkyne, a triaryl phosphine, a cyclooctene or an oxanobornadiene; or,
      • when X is a a triaryl phosphine, then R₁ is an azide; or,
      • when X is a an oxanobornadiene, then R₁ is an azide; or,
      • when X is a an alkyne, then R₁ is an azide; or,
      • when X is a an alkene, then R₁ is an azide; or,
      • when X is a a cyclooctene, then R₁ is a diaryl tetrazine; or,
      • when X is a a diaryl tetrazine, then R₁ is a cyclooctene; or,
      • when X is a a monoaryl tetrazine, then R₁ is a norbornene; or,
      • when X is a a norbornene, then R₁ is a monoaryl tetrazine; or,
      • when X is a an aldehyde, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
      • when X is a a ketone, then R₁ is a hydroxylamine or a hydrazine or NH₂—NH—C(═O)—; or,
      • when X is a a hydroxylamine, then R₁ is an aldehyde or a ketone; or,
      • when X is a a hydrazine, then R₁ is an aldehyde or a ketone; or,
      • when X is a NH₂—NH—C(═O)—, then R₁ is an aldehyde or a ketone; or,
      • when X is a a haloacetamide, then R₁ is a thiol; or,
      • when X is a a maleimide, then R₁ is a thiol;
  • thereby the terminal group is attached to the peptide tag by a linker having the structure according to Formula (III-h):

• • where the * denotes the phosphopantetheinyl moiety is attached to the peptide tag, and wherein L₁, L₂, L₃, A₄, X₂, R₂, PG and TG are as defined herein

In certain embodiments of the above methods of preparation

• • A₁ is —C(═O)NH—, —NHC(═O)—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, or —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;
  • L₂ is a bond, -A₂-, or -A₂X²—;
  • L₃ is a bond, -A₃-, or -A₃X²—;
  • L₄ is a bond, -A₄-, -A₄X²—,

• • A₂ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NR⁴—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nS—, —(C(R⁴)₂)_nS—, —S(CH₂)_n—, —S(C(R⁴)₂)_n—, —(CH₂)_nNH—, —(C(R⁴)₂)_nNH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)NH(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;

• • A₃ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nS—, —(C(R⁴)₂)_nS—, —S(CH₂)_n—, —S(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)NH(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)NH(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)—, —(CH₂)_n(O(CH₂)_n)_mC(═O)—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mC(═O)—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;

• • A₄ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, or —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;
  • each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• • each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
  • each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
  • each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
  • R⁷ is independently selected from H, phenyl and pyridine;
  • R⁸ is independently selected from

• • R⁹ is independently selected from H and C_1-6haloalkyl;
  • each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9;
  • each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
  • TG is selected from a drug moiety, an affinity probe, a chelator, a spectroscopic probe, a radioactive probe, a lipid molecule, a polyethylene glycol, a polymer, a nanoparticle, a quantum dot, a liposome, a PLGA particle, and a polysaccharide.

In other embodiments of the above methods of preparation

• • A₁ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
  • L₂ is a bond, -A₂-, or -A₂X²—;
  • L₃ is a bond, -A₃-, or -A₃X²—;
  • L₄ is a bond, -A₄-, or -A₄X²—;

• • A₁ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
  • A₂ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m, ((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n— or

• • A₃ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n— or

• • A₄ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
  • each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• • each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
  • each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
  • each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
  • R⁷ is independently selected from H, phenyl and pyridine;
  • R⁸ is independently selected from

• • R⁹ is independently selected from H and C_1-6haloalkyl;
  • each n is independently selected from 1, 3, 4, 5, 6, 7, 8 and 9, and
  • each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9.
    In other embodiments of the above methods of preparation
  • L₁ is a bond, -A₁-, -A₁X²— or —X²—;
  • L₃ is a bond, -A₃-, or -A₃X²—;
  • L₄ is a bond, -A₄-, or -A₄X²—;

• • A₁ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
  • A₂ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—; or

• • A₃ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n— or

• • A₄ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
  • each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• • each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
  • each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
  • each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
  • R⁷ is independently selected from H, phenyl and pyridine;
  • R⁸ is independently selected from

• • R⁹ is independently selected from H and C_1-6haloalkyl;
  • each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
  • each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9.

Another aspect provided herein are conjugated antibodies or antibody fragment thereof, comprising the modified antibody or antibody fragment provided herein, wherein a serine residue of the peptide tag in the modified antibody or antibody fragment thereof is conjugated to a 4′-phosphopantetheine group having the structure of Formula (D-a), Formula (E-a), Formula (F-a) or Formula (G-a):

wherein:

• • L₁ is -A₁X²— or —X²—;
  • L₂ is a bond, -A₂-, or -A₂X²—;
  • L₃ is a bond, -A₃-, or -A₃X²—;
  • L₄ is a bond, -A₄-, -A₄X²—,

• • A₁ is —C(═O)NH—, —NHC(═O)—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, or —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;
  • A₂ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NR⁴—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nS—, —(C(R⁴)₂)_nS—, —S(CH₂)_n—, —S(C(R⁴)₂)_n—, —(CH₂)_nNH—, —(C(R⁴)₂)_nNH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)NH(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)NH(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—,

• • A₃ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nS—, —(C(R⁴)₂)_nS—, —S(CH₂)_n—, —S(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)NH(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)NH(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)—, —(CH₂)_n(O(CH₂)_n)_mC(═O)—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mC(═O)—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—,

• • A₄ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, or —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;
  • each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• • each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
  • each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
  • each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
  • R⁷ is independently selected from H, phenyl and pyridine;
  • R⁹ is independently selected from

• • R⁹ is independently selected from H and C_1-6haloalkyl;
  • each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9,
  • each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
  • R¹ is a thiol, a maleimide, a haloacetamide, an alkyne, a triaryl phosphine, a cyclooctene, an oxanobornadiene, an azide, a diaryl tetrazine, a norbornene, a monoaryl tetrazine, a hydroxylamine, a hydrazine, NH₂—NH—C(═O)—, an aldehyde or a ketone.

In certain embodiments of such conjugated antibodies or antibody fragments thereof, the 4′-phosphopantetheine group is

In certain embodiments of such conjugated antibodies or antibody fragments thereof, the conjugated serine has a structure selected from:

In other embodiments of such conjugated antibodies or antibody fragments thereof, the conjugated serine is

Another aspect provided herein are conjugated antibodies or antibody fragment thereof, comprising a modified antibody or antibody fragment thereof provided herein, wherein a serine residue of the peptide tag is conjugated to a modified 4′-phosphopantetheine group and the conjugated serine has a structure selected from:

wherein

• • L₁ is -A₁X²— or —X²—;
  • L₂ is a bond, -A₂-, or -A₂X²—;
  • L₃ is a bond, -A₃-, or -A₃X²—;
  • L₄ is a bond, -A₄-, -A₄X²—,

• • A₁ is —C(═O)NH—, —NHC(═O)—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, (O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, or —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;
  • A₂ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NR⁴—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nS—, —(C(R⁴)₂)_nS—, —S(CH₂)_n—, —S(C(R⁴)₂)_n—, —(CH₂)_nNH—, —(C(R⁴)₂)_nNH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)NH(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)NH(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n,

• • A₃ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —C₂C(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nS—, —(C(R⁴)₂)_nS—, —S(CH₂)_n—, —S(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)NH(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)NH(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)—, —(CH₂)_n(O(CH₂)_n)_mC(═O)—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mC(═O)—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—,

• • A₄ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, or —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;
  • each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• • each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
  • each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
  • each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
  • R⁷ is independently selected from H, phenyl and pyridine;
  • R⁸ is independently selected from

• • R⁹ is independently selected from H and C_1-6haloalkyl;
  • each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9,
  • each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
  • TG is a drug moiety, an affinity probe, a chelator, a spectroscopic probe, a radioactive probe, an imaging reagent, a lipid molecule, a polyethylene glycol, a polymer, a nanoparticle, a quantum dot, a liposome, a PLGA particle, a polysaccharide, an acetyl group, or a surface.

In certain embodiments of such conjugated antibodies or antibody fragments thereof, the conjugated serine is

of such conjugated antibodies or antibody fragments thereof, X₂ is

or —(CH₂)_nC(═O)NH—.

The present invention also provides pharmaceutical compositions comprising an effective amount of the immunoconjugate of the invention, or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable diluent, carrier or excipient.

The present invention provides a method of treating a disease, such as cancer, comprising administering to a mammal in need thereof an effective amount of an immunoconjugate of the invention. In some embodiments, the present invention provides immunoconjugates for use as a medicament. In some embodiments, the present invention provides use of an immunoconjugate in the manufacture of a medicament for treatment of cancer, autoimmune diseases, inflammatory diseases, infectious diseases (e.g., bacterial, fungus, virus), genetic disorders, cardiovascular diseases, and/or metabolic diseases.

The present invention provides methods of producing the immunoconjugates described herein. In one embodiment, the method comprises incubating the modified antibody or antibody fragment of invention, a 4′-phosphopantetheinyl transferase, and a terminal group linked to CoA under suitable conditions to promote formation of an immunoconjugate comprising the antibody or antibody fragment and the terminal group linked together by 4′-phosphopantetheine. In a specific embodiment, the suitable condition comprises a temperature between 4° C. to 37° C. and pH 6.5 to pH 9.0.

Definitions

The terms “alkenyl” or “alkene”, as used herein, refer to a branched or straight chain hydrocarbon having at least one carbon-carbon double bond. Atoms oriented about the double bond are in either the cis (Z) or trans (E) conformation. As used herein, the terms “C₂-C₄alkenyl”, “C₂-C₅alkenyl”, “C₂-C₆alkenyl”, “C₂-C₇alkenyl”, “C₂-C₈alkenyl”, “C₂-C₄alkene”, “C₂-C₅alkene”, “C₂-C₆alkene”, “C₂-C₇alkene”, and “C₂-C₈alkene” refer to a branched or straight chain hydrocarbon having at least one carbon-carbon double bond and containing at least 2, and at most 4, 5, 6, 7 or 8 carbon atoms, respectively. Non-limiting examples of alkenyl groups, as used herein, include ethenyl, ethane, epropenyl, propene, allyl (2-propenyl), 2-propene, butenyl, pentenyl, pentene, hexenyl, heptenyl, heptene, octenyl, nonenyl, nonene, decenyl, decene and the like. If not otherwise specified, an alkenyl group generally is a C₂-C₆ alkenyl.

The terms “alkynyl” or “alkyne”, as used herein, refer to a branched or straight chain hydrocarbon radical having at least one carbon-carbon triple bond. As used herein, the terms “C₂-C₄alkynyl”, “C₂-C₅alkynyl”, “C₂-C₆alkynyl”, “C₂-C₇alkynyl”, and “C₂-C₈alkynyl” refer to a branched or straight chain hydrocarbon radical having at least one carbon-carbon triple bond and containing at least 2, and at most 4, 5, 6, 7 or 8 carbon atoms, respectively. Non-limiting examples of alkynyl groups, as used herein, include ethynyl, propynyl, butynyl, pentynyl, hexynyl, heptynyl, octynyl, nonynyl, decynyl and the like. If not otherwise specified, an alkynyl group generally is a C₂-C₆ alkynyl.

The term “alkyl,” as used herein, refers to a saturated branched or straight chain hydrocarbon. As used herein, the terms “C₁-C₃alkyl”, “C₁-C₄alkyl”, “C₁-C₅alkyl”, “C₁-C₆alkyl”, “C₁-C₇alkyl” or “C₁-C₈alkyl” refer to saturated branched or straight chain hydrocarbon containing at least 1, and at most 3, 4, 5, 6, 7 or 8 carbon atoms, respectively. Non-limiting examples of alkyl groups as used herein include methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, sec-butyl, t-butyl, n-pentyl, isopentyl, hexyl, heptyl, octyl, nonyl, decyl and the like. If not otherwise specified, an alkyl group generally is a C₁-C₆ alkyl.

The term “alkoxy,” as used herein, refers to the group —OR_a, where R_a is an alkyl group as defined herein. As used herein, the terms “C₁-C₃alkoxy”, “C₁-C₄alkoxy”, “C₁-C₅alkoxy”, “C-C₆alkoxy”, “C₁-C₇alkoxy” and “C₁-C₈alkoxy” refer to an alkoxy group wherein the alkyl moiety contains at least 1, and at most 3, 4, 5, 6, 7 or 8, carbon atoms. Non-limiting examples of alkoxy groups, as used herein, include methoxy, ethoxy, n-propoxy, isopropoxy, n-butyloxy, t-butyloxy, pentyloxy, hexyloxy, heptyloxy, octyloxy, nonyloxy, decyloxy and the like.

The term “aryl”, as used herein, refers to monocyclic, bicyclic, and tricyclic ring systems having a total of six to fourteen ring members, wherein at least one ring in the system is aromatic. An aryl group also includes one or more aromatic rings fused to one or more non-aromatic hydrocarbon rings. Non-limiting examples of aryl groups, as used herein, include phenyl (Ph), naphthyl, fluorenyl, indenyl, azulenyl, anthracenyl and the like. An aryl group may contain one or more substituents and thus may be “optionally substituted”. Unless otherwise specified, aryl groups can have up to four substituents.

The term “cycloalkyl”, as used herein, refers to a saturated monocyclic, fused bicyclic, fused tricyclic or bridged polycyclic ring assembly. As used herein, the terms “C₃-C₅cycloalkyl”, “C₃-C₆cycloalkyl”, “C₃-C₇cycloalkyl”, “C₃-C₈cycloalkyl, “C₃-C₉cycloalkyl and “C₃-C₁₀cycloalkyl refer to a saturated monocyclic, fused bicyclic, fused tricyclic or bridged polycyclic ring assembly which contains at least 3, and at most 5, 6, 7, 8, 9 or 10, carbon atoms. Non-limiting examples of cycloalkyl groups, as used herein, include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, cyclooctyl, cyclononyl, cyclodecyl, decahydronaphthalenyl and the like. If not otherwise specified, a cycloalkyl group generally is a C₃-C₈ cycloalkyl.

The terms “cycloalkenyl” or “cycloalkene”, as used herein, refers to a monocyclic, fused bicyclic, fused tricyclic or bridged polycyclic ring assembly having at least one carbon-carbon double bond. Atoms oriented about the double bond are in either the cis (Z) or trans (E) conformation. A monocyclic cycloalkene can be fused to one or two aryl rings. Non-limiting examples of cycloalkenyl groups, as used herein, include cyclopropenyl, cyclobutenyl, cyclopentenyl, cyclohexenyl, cycloheptenyl, cyclooctenyl, cyclononenyl, cyclodecenyl, and the like. If not otherwise specified, a cycloalkenyl group generally is a C₅-C₈ cycloalkenyl.

The terms “cycloalkynyl” or “cycloalkyne”, as used herein, refers to a monocyclic, fused bicyclic, fused tricyclic or bridged polycyclic ring assembly having at least one carbon-carbon triple bond. A monocyclic cycloalkyne can be fused to one or two aryl rings. Non-limiting examples of cycloalkynyl groups, as used herein, include cyclopropynyl, cyclobutynyl, cyclopentynyl, cyclohexynyl, cycloheptynyl, cyclooctynyl, cyclononynyl, cyclodecynyl, and the like. If not otherwise specified, a cycloalkynyl group generally is a C₆-C₈ cycloalkynyl.

The term “heteroaryl,” as used herein, refers to a 5-6 membered heteroaromatic monocyclic ring having 1 to 4 heteroatoms independently selected from nitrogen, oxygen and sulfur, an 8-10 membered fused bicyclic ring having 1 to 4 heteroatoms independently selected from nitrogen, oxygen and sulfur as ring members and where at least one of the rings is aromatic, or a 12-14 membered fused tricyclic ring having 1 to 4 heteroatoms independently selected from nitrogen, oxygen and sulfur and where at least one of the rings is aromatic. Such fused bicyclic and tricyclic ring systems may be fused to one or more aryl, cycloalkyl, or heterocycloalkyl rings. Non-limiting examples of heteroaryl groups, as used herein, include 2- or 3-furyl; 1-, 2-, 4-, or 5-imidazolyl; 3-, 4-, or 5-isothiazolyl; 3-, 4-, or 5-isoxazolyl; 2-, 4-, or 5-oxazolyl; 4- or 5-1,2,3-oxadiazolyl; 2- or 3-pyrazinyl; 1-, 3-, 4-, or 5-pyrazolyl; 3-, 4-, 5- or 6-pyridazinyl; 2-, 3-, or 4-pyridyl; 2-, 4-, 5- or 6-pyrimidinyl; 1-, 2- or 3-pyrrolyl; 1- or 5-tetrazolyl; 2- or 5-1,3,4-thiadiazolyl; 2-, 4-, or 5-thiazolyl; 2- or 3-thienyl; 2-, 4- or 6-1,3,5-triazinyl; 1-, 3- or 5-1,2,4-triazolyl; 1-, 4- or 5-1,2,3-triazolyl; 1-, 2-, 3-, 4-, 5-, 6-, 7-, 8-, or 9-acridinyl; 1-, 3-, 4-, 5-, 6-, 7-, 8-, 9-, or 10-benzo[g]isoquinoline; 2-, 4-, 5-, 6-, or 7-benzoxazolyl; 1-, 2-, 4-, 5-, 6-, or 7-benzimidazolyl; 2-, 4-, 5-, 6-, or 7-benzothiazolyl; 2-, 3-, 4-, 5-, 6-, 7-benzo[b]thienyl; 2-, 3-, 4-, 5-, 6-, 7-, 8-, 9-benzo[b]oxepine; 2-, 4-, 5-, 6-, 7-, or 8-benzoxazinyl; 1-, 2-, 3-, 4-, 5-, 6-, 7-, 8, or 9-carbazolyl; 3-, 4-, 5-, 6-, 7-, or 8-cinnolinyl; 2-, 4-, or 5-4H-imidazo[4,5-d] thiazolyl; 2-, 3-, 5-, or 6-imidazo[2,1-b] thiazolyl; 2-, 3-, 6-, or 7-imidazo[1,2-b][1,2,4]triazinyl; 1-, 3-, 4-, 5-, 6-, or 7-indazolyl; 1-, 2-, 3-, 5-, 6-, 7-, or 8-indolizinyl; 1-, 2-, 3-, 4-, 5-, 6-, or 7-indolyl; 1-, 2-, 3-, 4-, 5-, 6- or 7-isoindolyl; 1-, 3-, 4-, 5-, 6-, 7-, or 8-isoquinoliyl; 2-, 3-, 4-, 5-, 6-, or 7-naphthyridinyl; 1-, 2-, 4-, 5-, 6-, 7-, 8-, or 9-perimidinyl; 1-, 2-, 3-, 4-, 6-, 7-, 8-, 9-, or 10-phenanthridinyl; 1-, 2-, 3-, 4- , 5-, 6-, 7-, 8-, 9-, or 10-phenathrolinyl; 1-, 2-, 3-, 4-, 6-, 7-, 8-, or 9-phenazinyl; 1-, 2-, 3-, 4-, 6-, 7-, 8-, 9-, or 10-phenothiazinyl; 1-, 2-, 3-, 4-, 6-, 7-, 8-, 9-, or 10-phenoxazinyl; 1-, 4-, 5-, 6-, 7-, or 8-phthalazinyl; 2-, 4-, 6-, or 7-pteridinyl; 2-, 6-, 7-, or 8-purinyl; 2-, 3-, 5-, 6-, 7-, 8-, 9-, 10-, or 11-7H-pyrazino[2,3-c]carbazolyl; 2-, 3-, 5-, 6-, or 7-furo[3,2-b]-pyranyl; 1-, 3-, or 5-1H-pyrazolo[4,3-d]-oxazolyl; 2-, 3-, 5-, or 8-pyrazino[2,3-d]pyridazinyl; 1-, 2-, 3-, 4-, 5-, or 8-5H-pyrido[2,3-d]-o-oxazinyl; 1-, 2-, 3-, 4-, 6-, 7-, 8-, or 9-quinolizinyl; 2-, 3-, 4-, 5-, 6-, 7-, or 8-quinolinyl; 2-, 3-, 4-, 5-, 6-, 7-, or 8-quinazolinyl; 2-, 3-, 4-, or 5-thieno[2,3-b]furanyl, and 1-, 3-, 6-, 7-, 8-, or 9-furo[3,4-c]cinnolinyl.

The term “heteroatoms,” as used herein, refers to nitrogen (N), oxygen (O) or sulfur (S) atoms.

The term “heterocycloalkyl,” as used herein refers to a to saturated 3-8 membered monocyclic hydrocarbon ring structure, a saturated 6-9 membered fused bicyclic hydrocarbon ring structure, or a saturated 10-14 membered fused tricyclic hydrocarbon ring structure, wherein one to four of the ring carbons of the hydrocarbon ring structure are replaced by one to four groups independently selected from —O—, —NR—, and —S—, wherein R is hydrogen, C₁-C₄alkyl or an amino protecting group. Non-limiting examples of heterocycloalkyl groups, as used herein, include aziridinyl, aziridin-1-yl, aziridin-2-yl, aziridin-3-yl, oxiranyl, oxiran-2-yl, oxiran-3-yl, thiiranyl, thiiran-2-yl, thiiran-3-yl, azetadinyl, azetadin-1-yl, azetadin-2-yl, azetadin-3-yl, oxetanyl, oxetan-2-yl, oxetan-3-yl, oxetan-4-yl, thietanyl, thietan-2-yl, thietan-3-yl, thietan-4-yl, pyrrolidinyl, pyrrolidin-1-yl, pyrrolidin-2-yl, pyrrolidin-3-yl, pyrrolidin-4-yl, pyrrolidin-5-yl, tetrahydrofuranyl, tetrahydrofuran-2-yl, tetrahydrofuran-3-yl, tetrahydrofuran-4-yl, tetrahydrofuran-5-yl, tetrahydrothienyl, tetrahydrothien-2-yl, tetrahydrothien-3-yl, tetrahydrothien-4-yl, tetrahydrothien-5-yl, piperidinyl, piperidin-1-yl, piperidin-2-yl, piperidin-3-yl, piperidin-4-yl, piperidin-5-yl, piperidin-6-yl, tetrahydropyranyl, tetrahydropyran-2-yl, tetrahydropyran-3-yl, tetrahydropyran-4-yl, tetrahydropyran-5-yl, tetrahydropyran-6-yl, tetrahydrothiopyranyl, tetrahydrothiopyran-2-yl, tetrahydrothiopyran-3-yl, tetrahydrothiopyran-4-yl, tetrahydrothiopyran-5-yl, tetrahydrothiopyran-6-yl, piperazinyl, piperazin-1-yl, piperazin-2-yl, piperazin-3-yl, piperazin-4-yl, piperazin-5-yl, piperazin-6-yl, morpholinyl, morpholin-2-yl, morpholin-3-yl, morpholin-4-yl, morpholin-5-yl, morpholin-6-yl, thiomorpholinyl, thiomorpholin-2-yl, thiomorpholin-3-yl, thiomorpholin-4-yl, thiomorpholin-5-yl, thiomorpholin-6-yl, oxathianyl, oxathian-2-yl, oxathian-3-yl, oxathian-5-yl, oxathian-6-yl, dithianyl, dithian-2-yl, dithian-3-yl, dithian-5-yl, dithian-6-yl, azepanyl, azepan-1-yl, azepan-2-yl, azepan-3-yl, azepan-4-yl, azepan-5-yl, azepan-6-yl, azepan-7-yl, oxepanyl, oxepan-2-yl, oxepan-3-yl, oxepan-4-yl, oxepan-5-yl, oxepan-6-yl, oxepan-7-yl, thiepanyl, thiepan-2-yl, thiepan-3-yl, thiepan-4-yl, thiepan-5-yl, thiepan-6-yl, thiepan-7-yl, dioxolanyl, dioxolan-2-yl, dioxolan-4-yl, dioxolan-5-yl, thioxanyl, thioxan-2-yl, thioxan-3-yl, thioxan-4-yl, thioxan-5-yl, dithiolanyl, dithiolan-2-yl, dithiolan-4-yl, dithiolan-5-yl, pyrrolinyl, pyrrolin-1-yl, pyrrolin-2-yl, pyrrolin-3-yl, pyrrolin-4-yl, pyrrolin-5-yl, imidazolinyl, imidazolin-1-yl, imidazolin-3-yl, imidazolin-4-yl, imidazolin-5-yl, imidazolidinyl, imidazolidin-1-yl, imidazolidin-2-yl, imidazolidin-3-yl, imidazolidin-4-yl, imidazolidin-4-yl, pyrazolinyl, pyrazolin-1-yl, pyrazolin-3-yl, pyrazolin-4-yl, pyrazolin-5-yl, pyrazolidinyl, pyrazolidin-1-yl, pyrazolidin-2-yl, pyrazolidin-3-yl, pyrazolidin-4-yl, pyrazolidin-5-yl, hexahydro-1,4-diazepinyl, dihydrofuranyldihydropyranyl, 1,2,3,6-tetrahydropyridinyl, 2H-pyranyl, 4H-pyranyl, dihydropyranyl, dihydrothienyl, dihydrofuranyl, 3-azabicyclo[3.1.0]hexanyl, 3-azabicyclo[4.1.0]heptanyl, pyrrolidinyl-2-one, piperidinyl-3-one piperidinyl-2-one, piperidinyl-4-one, and 2H-pyrrolyl.

The term “optionally substituted”, as used herein, means that the referenced group may or may not be substituted with one or more additional group(s) in place of one or more hydrogen atoms of the unsubstituted group. The number of such groups that can be present ranges from one up to the number of hydrogen atoms on the unsubstituted group. The optional substituents, unless otherwise specified, are individually and independently selected from alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl, heterocycloalkyl, hydroxyl, alkoxy, mercaptyl, cyano, halo, carbonyl, thiocarbonyl, isocyanato, thiocyanato, isothiocyanato, nitro, perhaloalkyl, perfluoroalkyl, and amino, including mono- and di-substituted amino groups, and the protected derivatives thereof. Non-limiting examples of optional substituents include, halo (particularly F, Cl and Br), —CN, —OR, —R, —NO₂, —C(═O)R, —OC(═O)R, —C(═O)OR, —OC(═O)NHR, —C(═O)N(R)₂, —SR—, —S(═O)R, —S(═O)₂R, —NHR, —N(R)₂, —NHC(═O)R, —NRC(═O)R, —NRC(S)R, NHC(═O)OR, —NRCO₂R, —NRC(═O)N(R)₂, —NRC(S)N(R)₂, —NRNRC(═O)R, —NRNRC(═O)N(R)₂, —NRNRCO₂R, —C(═O)NH—, S(═O)₂NHR, —S(═O)₂N(R)₂, —NHS(═O)₂, —NHS(═O)₂R, —C(═O)_nC(═O)R, —C(═O)CH₂C(═O)R, —C(S)R, —C(═O)N(R)₂, —C(S)N(R)₂, —OC(═O)N(R)₂, —C(═O)N(OR)R, —C(NOR)R, —S(═O)₃R, —NRSO₂N(R)₂, —NRSO₂R, —N(OR)R, —C(═NH)—N(R)₂, —P(═O)₂R, —PO(R)₂, —OPO(R)₂, —(CH₂)_0-2NHC(═O)R, phenyl (Ph) optionally substituted with R, —O(Ph) optionally substituted with R, —(CH₂)_1-2(Ph), optionally substituted with R, —CH═CH(Ph), optionally substituted with R, C₁-C₆ alkyl, C₁-C₆ alkoxy, aryl, heteroaryl, cycloalkyl, heterocycloalkyl, halo-substituted C₁-C₆alkyl, halo-substituted C₁-C₆alkoxy, where each R is independently selected from H, C₁-C₆ alkyl, C₂-C₆ alkenyl, C₂-C₆ alkynyl, C₁-C₆ alkoxy, aryl, heteroaryl, C_3-8 cycloalkyl, C_3-8 heterocycloalkyl, halo-substituted C₁-C₆alkyl, halo-substituted C₁-C₆alkoxy; and two R groups on the same or on adjacent connected atoms can be taken together to form a 5-6 membered ring optionally containing an additional N, O or S as a ring member. Suitable substituents for alkyl, cycloalkyl, and heterocycloalkyl groups can further include ═CHR, ═O (oxo) and ═N—R. Preferred substituents for an aryl or heteroaryl group are selected from F, Cl, Br, CN, —NR′₂, hydroxy, C₁-C₄ alkyl, C₁-C₄ haloalkyl, C₁-C₄ alkoxy, C₁-C₄ haloalkoxy, C₁-C₄ alkoxy-C₁-C₄alkyl, —COOR′, —CONR′₂, —SR′, and —SO₂R′, where each R′ is H or C₁-C₄ alkyl. Preferred substituents for an alkyl, cycloalkyl or heterocycloalkyl group are selected from oxo (═O), F, Cl, Br, CN, —NR′₂, hydroxy, C₁-C₄ alkyl, C₁-C₄ haloalkyl, C₁-C₄ alkoxy, C₁-C₄ haloalkoxy, C₁-C₄ alkoxy-C₁-C₄alkyl, —COOR′, —CONR′₂, —SR′, and —SO₂R′, where each R′ is H or C₁-C₄ alkyl.

The term “amino acid” refers to naturally occurring, synthetic, and unnatural amino acids, as well as amino acid analogs and amino acid mimetics that function in a manner similar to the naturally occurring amino acids. Naturally occurring amino acids are those encoded by the genetic code, as well as those amino acids that are later modified, e.g., hydroxyproline, γ-carboxyglutamate, and O-phosphoserine. Amino acid analogs refer to compounds that have the same basic chemical structure as a naturally occurring amino acid, i.e., an α-carbon that is bound to a hydrogen, a carboxyl group, an amino group, and an R group, e.g., homoserine, norleucine, methionine sulfoxide, methionine methyl sulfonium. Such analogs have modified R groups (e.g., norleucine) or modified peptide backbones, but retain the same basic chemical structure as a naturally occurring amino acid. Amino acid mimetics refers to chemical compounds that have a structure that is different from the general chemical structure of an amino acid, but that functions in a manner similar to a naturally occurring amino acid.

The term “unnatural amino acid”, as used herein, is intended to represent amino acid structures that cannot be generated biosynthetically in any organism using unmodified or modified genes from any organism, whether the same or different. In addition, it is understood that such “unnatural amino acids” require a modified tRNA and a modified tRNA synthetase (RS) for incorporation into a protein. These “selected” orthogonal tRNA/RS pair are specific for the unnatural amino acid and are generated by a selection process as developed by Schultz et al. (see, e.g., Liu et al., Annu. Rev. Biochem. 79:413-444, 2010) or a similar procedure. The term “unnatural amino acid” does not include the natural occurring 22^nd proteinogenic amino acid pyrrolysine (Pyl) as well as its demethylated analog pyrroline-carboxy-lysine (Pcl), because incorporation of both residues into proteins is mediated by the unmodified, naturally occurring pyrrolysyl-tRNA/tRNA synthetase pair (see, e.g., Ou et al., Proc. Natl. Acad. Sci. USA. 108:10437-10442, 2011).

The term “antibody” as used herein refers to a polypeptide of the immunoglobulin family that is capable of binding a corresponding antigen non-covalently, reversibly, and in a specific manner. For example, a naturally occurring IgG antibody is a tetramer comprising at least two heavy (H) chains and two light (L) chains inter-connected by disulfide bonds. Each heavy chain is comprised of a heavy chain variable region (abbreviated herein as V_H) and a heavy chain constant region. The heavy chain constant region is comprised of three domains, CH1, CH2 and CH3. Each light chain is comprised of a light chain variable region (abbreviated herein as VL) and a light chain constant region. The light chain constant region is comprised of one domain, C_L. The V_H and V_L regions can be further subdivided into regions of hypervariability, termed complementarity determining regions (CDR), interspersed with regions that are more conserved, termed framework regions (FR). Each V_H and V_L is composed of three CDRs and four FRs arranged from amino-terminus to carboxy-terminus in the following order: FR1, CDR1, FR2, CDR2, FR3, CDR3, and FR4. The variable regions of the heavy and light chains contain a binding domain that interacts with an antigen. The constant regions of the antibodies may mediate the binding of the immunoglobulin to host tissues or factors, including various cells of the immune system (e.g., effector cells) and the first component (Clq) of the classical complement system.

The term “antibody” includes, but is not limited to, monoclonal antibodies, human antibodies, humanized antibodies, camelid antibodies, chimeric antibodies, and anti-idiotypic (anti-Id) antibodies (including, e.g., anti-Id antibodies to antibodies of the invention). The antibodies can be of any isotype/class (e.g., IgG, IgE, IgM, IgD, IgA and IgY), or subclass (e.g., IgG1, IgG2, IgG3, IgG4, IgA1 and IgA2).

Both the light and heavy chains are divided into regions of structural and functional homology. The terms “constant” and “variable” are used functionally. In this regard, it will be appreciated that the variable domains of both the light (V_L) and heavy (V_H) chain portions determine antigen recognition and specificity. Conversely, the constant domains of the light chain (C_L) and the heavy chain (CH1, CH2 or CH3) confer important biological properties such as secretion, transplacental mobility, Fc receptor binding, complement binding, and the like. By convention, the numbering of the constant region domains increases as they become more distal from the antigen binding site or amino-terminus of the antibody. The N-terminus is a variable region and at the C-terminus is a constant region; the CH3 and C_L domains actually comprise the carboxy-terminal domains of the heavy and light chain, respectively. The term “antigen binding fragment”, as used herein, refers to one or more portions of an antibody that retain the ability to specifically interact with (e.g., by binding, steric hindrance, stabilizing/destabilizing, spatial distribution) an epitope of an antigen. Examples of binding fragments include, but are not limited to, single-chain Fvs (scFv), disulfide-linked Fvs (sdFv), Fab fragments, F(ab′) fragments, a monovalent fragment consisting of the V_L, V_H, C_L and CH1 domains; a F(ab)₂ fragment, a bivalent fragment comprising two Fab fragments linked by a disulfide bridge at the hinge region; a Fd fragment consisting of the V_H and CH1 domains; a Fv fragment consisting of the V_L and V_H domains of a single arm of an antibody; a dAb fragment (Ward et al., Nature 341:544-546, 1989), which consists of a V_H domain; and an isolated complementarity determining region (CDR), or other epitope-binding fragments of an antibody.

Furthermore, although the two domains of the Fv fragment, V_L and V_H, are coded for by separate genes, they can be joined, using recombinant methods, by a synthetic linker that enables them to be made as a single protein chain in which the V_L and V_H regions pair to form monovalent molecules (known as single chain Fv (“scFv”); see, e.g., Bird et al., Science 242:423-426, 1988; and Huston et al., Proc. Natl. Acad. Sci. 85:5879-5883, 1988). Such single chain antibodies are also intended to be encompassed within the term “antigen binding fragment.” These antigen binding fragments are obtained using conventional techniques known to those of skill in the art, and the fragments are screened for utility in the same manner as are intact antibodies.

Antigen binding fragments can also be incorporated into single domain antibodies, maxibodies, minibodies, nanobodies, intrabodies, diabodies, triabodies, tetrabodies, v-NAR and bis-scFv (see, e.g., Hollinger and Hudson, Nature Biotechnology 23:1126-1136, 2005). Antigen binding fragments can be grafted into scaffolds based on polypeptides such as fibronectin type III (Fn3) (see U.S. Pat. No. 6,703,199, which describes fibronectin polypeptide monobodies). Antigen binding fragments can be incorporated into single chain molecules comprising a pair of tandem Fv segments (V_H-CH1-V_H-CH1) which, together with complementary light chain polypeptides, form a pair of antigen binding regions (Zapata et al., Protein Eng. 8:1057-1062, 1995; and U.S. Pat. No. 5,641,870).

The term “monoclonal antibody” or “monoclonal antibody composition” as used herein refers to polypeptides, including antibodies and antigen binding fragments that have substantially identical amino acid sequence or are derived from the same genetic source. This term also includes preparations of antibody molecules of single molecular composition. A monoclonal antibody composition displays a single binding specificity and affinity for a particular epitope.

The term “human antibody”, as used herein, includes antibodies having variable regions in which both the framework and CDR regions are derived from sequences of human origin. Furthermore, if the antibody contains a constant region, the constant region also is derived from such human sequences, e.g., human germline sequences, or mutated versions of human germline sequences or antibody containing consensus framework sequences derived from human framework sequences analysis, for example, as described in Knappik et al., J. Mol. Biol. 296:57-86, 2000).

The human antibodies of the invention may include amino acid residues not encoded by human sequences (e.g., mutations introduced by random or site-specific mutagenesis in vitro or by somatic mutation in vivo, or a conservative substitution to promote stability or manufacturing).

The term “humanized” antibody, as used herein, refers to an antibody that retains the reactivity of a non-human antibody while being less immunogenic in humans. This can be achieved, for instance, by retaining the non-human CDR regions and replacing the remaining parts of the antibody with their human counterparts. See, e.g., Morrison et al., Proc. Natl. Acad. Sci. USA, 81:6851-6855 (1984); Morrison and Oi, Adv. Immunol., 44:65-92 (1988); Verhoeyen et al., Science, 239:1534-1536 (1988); Padlan, Molec. Immun., 28:489-498 (1991); Padlan, Molec. Immun., 31(3):169-217 (1994).

The term “recognize” as used herein refers to an antibody or antigen binding fragment thereof that finds and interacts (e.g., binds) with its epitope, whether that epitope is linear or conformational. The term “epitope” refers to a site on an antigen to which an antibody or antigen binding fragment of the invention specifically binds. Epitopes can be formed both from contiguous amino acids or noncontiguous amino acids juxtaposed by tertiary folding of a protein. Epitopes formed from contiguous amino acids are typically retained on exposure to denaturing solvents, whereas epitopes formed by tertiary folding are typically lost on treatment with denaturing solvents. An epitope typically includes at least 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14 or 15 amino acids in a unique spatial conformation. Methods of determining spatial conformation of epitopes include techniques in the art, for example, x-ray crystallography and 2-dimensional nuclear magnetic resonance (see, e.g., Epitope Mapping Protocols in Methods in Molecular Biology, Vol. 66, G. E. Morris, Ed. (1996)).

The term “affinity” as used herein refers to the strength of interaction between antibody and antigen at single antigenic sites. Within each antigenic site, the variable region of the antibody “arm” interacts through weak non-covalent forces with antigen at numerous sites; the more interactions, the stronger the affinity.

The term “isolated antibody” refers to an antibody that is substantially free of other antibodies having different antigenic specificities. An isolated antibody that specifically binds to one antigen may, however, have cross-reactivity to other antigens. Moreover, an isolated antibody may be substantially free of other cellular material and/or chemicals.

The term “conservatively modified variant” applies to both amino acid and nucleic acid sequences. With respect to particular nucleic acid sequences, conservatively modified variants refers to those nucleic acids which encode identical or essentially identical amino acid sequences, or where the nucleic acid does not encode an amino acid sequence, to essentially identical sequences. Because of the degeneracy of the genetic code, a large number of functionally identical nucleic acids encode any given protein. For instance, the codons GCA, GCC, GCG and GCU all encode the amino acid alanine. Thus, at every position where an alanine is specified by a codon, the codon can be altered to any of the corresponding codons described without altering the encoded polypeptide. Such nucleic acid variations are “silent variations,” which are one species of conservatively modified variations. Every nucleic acid sequence herein which encodes a polypeptide also describes every possible silent variation of the nucleic acid. One of skill will recognize that each codon in a nucleic acid (except AUG, which is ordinarily the only codon for methionine, and TGG, which is ordinarily the only codon for tryptophan) can be modified to yield a functionally identical molecule. Accordingly, each silent variation of a nucleic acid that encodes a polypeptide is implicit in each described sequence.

For polypeptide sequences, “conservatively modified variants” include individual substitutions, deletions or additions to a polypeptide sequence which result in the substitution of an amino acid with a chemically similar amino acid. Conservative substitution tables providing functionally similar amino acids are well known in the art. Such conservatively modified variants are in addition to and do not exclude polymorphic variants, interspecies homologs, and alleles of the invention. The following eight groups contain amino acids that are conservative substitutions for one another: 1) Alanine (A), Glycine (G); 2) Aspartic acid (D), Glutamic acid (E); 3) Asparagine (N), Glutamine (Q); 4) Arginine (R), Lysine (K); 5) Isoleucine (I), Leucine (L), Methionine (M), Valine (V); 6) Phenylalanine (F), Tyrosine (Y), Tryptophan (VV); 7) Serine (S), Threonine (T); and 8) Cysteine (C), Methionine (M) (see, e.g., Creighton, Proteins (1984)).

In some embodiments, the term “conservative sequence modifications” are used to refer to amino acid modifications that do not significantly affect or alter the binding characteristics of the antibody containing the amino acid sequence.

The term “optimized” as used herein refers to a nucleotide sequence has been altered to encode an amino acid sequence using codons that are preferred in the production cell or organism, generally a eukaryotic cell, for example, a yeast cell, a Pichia cell, a fungal cell, a Trichoderma cell, a Chinese Hamster Ovary cell (CHO) or a human cell. The optimized nucleotide sequence is engineered to retain completely or as much as possible the amino acid sequence originally encoded by the starting nucleotide sequence, which is also known as the “parental” sequence.

The terms “percent identical” or “percent identity,” in the context of two or more nucleic acids or polypeptide sequences, refers to two or more sequences or subsequences that are the same. Two sequences are “substantially identical” if two sequences have a specified percentage of amino acid residues or nucleotides that are the same (i.e., 60% identity, optionally 65%, 70%, 75%, 80%, 85%, 90%, 95%, or 99% identity over a specified region, or, when not specified, over the entire sequence), when compared and aligned for maximum correspondence over a comparison window, or designated region as measured using one of the following sequence comparison algorithms or by manual alignment and visual inspection. Optionally, the identity exists over a region that is at least about 50 nucleotides (or 10 amino acids) in length, or more preferably over a region that is 100 to 500 or 1000 or more nucleotides (or 20, 50, 200 or more amino acids) in length.

For sequence comparison, typically one sequence acts as a reference sequence, to which test sequences are compared. When using a sequence comparison algorithm, test and reference sequences are entered into a computer, subsequence coordinates are designated, if necessary, and sequence algorithm program parameters are designated. Default program parameters can be used, or alternative parameters can be designated. The sequence comparison algorithm then calculates the percent sequence identities for the test sequences relative to the reference sequence, based on the program parameters.

A “comparison window”, as used herein, includes reference to a segment of any one of the number of contiguous positions selected from the group consisting of from 20 to 600, usually about 50 to about 200, more usually about 100 to about 150 in which a sequence may be compared to a reference sequence of the same number of contiguous positions after the two sequences are optimally aligned. Methods of alignment of sequences for comparison are well known in the art. Optimal alignment of sequences for comparison can be conducted, e.g., by the local homology algorithm of Smith and Waterman, Adv. Appl. Math. 2:482c (1970), by the homology alignment algorithm of Needleman and Wunsch, J. Mol. Biol. 48:443 (1970), by the search for similarity method of Pearson and Lipman, Proc. Natl. Acad. Sci. USA 85:2444 (1988), by computerized implementations of these algorithms (GAP, BESTFIT, FASTA, and TFASTA in the Wisconsin Genetics Software Package, Genetics Computer Group, 575 Science Dr., Madison, Wis.), or by manual alignment and visual inspection (see, e.g., Brent et al., Current Protocols in Molecular Biology, 2003).

Two examples of algorithms that are suitable for determining percent sequence identity and sequence similarity are the BLAST and BLAST 2.0 algorithms, which are described in Altschul et al., Nuc. Acids Res. 25:3389-3402, 1977; and Altschul et al., J. Mol. Biol. 215:403-410, 1990, respectively. Software for performing BLAST analyses is publicly available through the National Center for Biotechnology Information. This algorithm involves first identifying high scoring sequence pairs (HSPs) by identifying short words of length W in the query sequence, which either match or satisfy some positive-valued threshold score T when aligned with a word of the same length in a database sequence. T is referred to as the neighborhood word score threshold (Altschul et al., supra). These initial neighborhood word hits act as seeds for initiating searches to find longer HSPs containing them. The word hits are extended in both directions along each sequence for as far as the cumulative alignment score can be increased. Cumulative scores are calculated using, for nucleotide sequences, the parameters M (reward score for a pair of matching residues; always >0) and N (penalty score for mismatching residues; always <0). For amino acid sequences, a scoring matrix is used to calculate the cumulative score. Extension of the word hits in each direction are halted when: the cumulative alignment score falls off by the quantity X from its maximum achieved value; the cumulative score goes to zero or below, due to the accumulation of one or more negative-scoring residue alignments; or the end of either sequence is reached. The BLAST algorithm parameters W, T, and X determine the sensitivity and speed of the alignment. The BLASTN program (for nucleotide sequences) uses as defaults a word length (W) of 11, an expectation (E) or 10, M=5, N=−4 and a comparison of both strands. For amino acid sequences, the BLASTP program uses as defaults a word length of 3, and expectation (E) of 10, and the BLOSUM62 scoring matrix (see Henikoff and Henikoff, (1989) Proc. Natl. Acad. Sci. USA 89:10915) alignments (B) of 50, expectation (E) of 10, M=5, N=−4, and a comparison of both strands.

The BLAST algorithm also performs a statistical analysis of the similarity between two sequences (see, e.g., Karlin and Altschul, Proc. Natl. Acad. Sci. USA 90:5873-5787, 1993). One measure of similarity provided by the BLAST algorithm is the smallest sum probability (P(N)), which provides an indication of the probability by which a match between two nucleotide or amino acid sequences would occur by chance. For example, a nucleic acid is considered similar to a reference sequence if the smallest sum probability in a comparison of the test nucleic acid to the reference nucleic acid is less than about 0.2, more preferably less than about 0.01, and most preferably less than about 0.001.

The percent identity between two amino acid sequences can also be determined using the algorithm of E. Meyers and W. Miller, Comput. Appl. Biosci. 4:11-17, 1988) which has been incorporated into the ALIGN program (version 2.0), using a PAM120 weight residue table, a gap length penalty of 12 and a gap penalty of 4. In addition, the percent identity between two amino acid sequences can be determined using the Needleman and Wunsch, J. Mol. Biol. 48:444-453, 1970) algorithm which has been incorporated into the GAP program in the GCG software package (available at www.gcg.com), using either a Blossom 62 matrix or a PAM250 matrix, and a gap weight of 16, 14, 12, 10, 8, 6, or 4 and a length weight of 1, 2, 3, 4, 5, or 6.

Other than percentage of sequence identity noted above, another indication that two nucleic acid sequences or polypeptides are substantially identical is that the polypeptide encoded by the first nucleic acid is immunologically cross reactive with the antibodies raised against the polypeptide encoded by the second nucleic acid, as described below. Thus, a polypeptide is typically substantially identical to a second polypeptide, for example, where the two peptides differ only by conservative substitutions. Another indication that two nucleic acid sequences are substantially identical is that the two molecules or their complements hybridize to each other under stringent conditions, as described below. Yet another indication that two nucleic acid sequences are substantially identical is that the same primers can be used to amplify the sequence.

The term “nucleic acid” is used herein interchangeably with the term “polynucleotide” and refers to deoxyribonucleotides or ribonucleotides and polymers thereof in either single- or double-stranded form. The term encompasses nucleic acids containing known nucleotide analogs or modified backbone residues or linkages, which are synthetic, naturally occurring, and non-naturally occurring, which have similar binding properties as the reference nucleic acid, and which are metabolized in a manner similar to the reference nucleotides. Examples of such analogs include, without limitation, phosphorothioates, phosphoramidates, methyl phosphonates, chiral-methyl phosphonates, 2-O-methyl ribonucleotides, peptide-nucleic acids (PNAs).

Unless otherwise indicated, a particular nucleic acid sequence also implicitly encompasses conservatively modified variants thereof (e.g., degenerate codon substitutions) and complementary sequences, as well as the sequence explicitly indicated. Specifically, as detailed below, degenerate codon substitutions may be achieved by generating sequences in which the third position of one or more selected (or all) codons is substituted with mixed-base and/or deoxyinosine residues (Batzer et al., (1991) Nucleic Acid Res. 19:5081; Ohtsuka et al., (1985) J. Biol. Chem. 260:2605-2608; and Rossolini et al., (1994) Mol. Cell. Probes 8:91-98).

The term “operably linked” in the context of nucleic acids refers to a functional relationship between two or more polynucleotide (e.g., DNA) segments. Typically, it refers to the functional relationship of a transcriptional regulatory sequence to a transcribed sequence. For example, a promoter or enhancer sequence is operably linked to a coding sequence if it stimulates or modulates the transcription of the coding sequence in an appropriate host cell or other expression system. Generally, promoter transcriptional regulatory sequences that are operably linked to a transcribed sequence are physically contiguous to the transcribed sequence, i.e., they are cis-acting. However, some transcriptional regulatory sequences, such as enhancers, need not be physically contiguous or located in close proximity to the coding sequences whose transcription they enhance.

The terms “polypeptide” and “protein” are used interchangeably herein to refer to a polymer of amino acid residues. The terms apply to amino acid polymers in which one or more amino acid residue is an artificial chemical mimetic of a corresponding naturally occurring amino acid, as well as to naturally occurring amino acid polymers and non-naturally occurring amino acid polymer. Unless otherwise indicated, a particular polypeptide sequence also implicitly encompasses conservatively modified variants thereof.

The term “immunoconjugate” or “antibody conjugate” as used herein refers to the linkage of an antibody or an antigen binding fragment thereof with another agent, such as a chemotherapeutic agent, a toxin, an immunotherapeutic agent, an imaging probe, a spectroscopic probe, and the like. The linkage can be covalent bonds, or non-covalent interactions such as through electrostatic forces. Various linkers, known in the art, can be employed in order to form the immunoconjugate. Additionally, the immunoconjugate can be provided in the form of a fusion protein that may be expressed from a polynucleotide encoding the immunoconjugate. As used herein, “fusion protein” refers to proteins created through the joining of two or more genes or gene fragments which originally coded for separate proteins (including peptides and polypeptides). Translation of the fusion gene results in a single protein with functional properties derived from each of the original proteins.

The term “subject” includes human and non-human animals. Non-human animals include all vertebrates, e.g., mammals and non-mammals, such as non-human primates, sheep, dog, cow, chickens, amphibians, and reptiles. Except when noted, the terms “patient” or “subject” are used herein interchangeably.

The term “cytotoxin”, or “cytotoxic agent” as used herein, refer to any agent that is detrimental to the growth and proliferation of cells and may act to reduce, inhibit, or destroy a cell or malignancy.

The term “anti-cancer agent” as used herein refers to any agent that can be used to treat a cell proliferative disorder such as cancer, including but not limited to, cytotoxic agents, chemotherapeutic agents, radiotherapy and radiotherapeutic agents, targeted anti-cancer agents, and immunotherapeutic agents.

The term “terminal group (TG)” as used herein refers to a chemical moiety or a surface that is conjugated to the antibody or antigen binding fragment of the invention. For example, a terminal group can be a drug moiety selected from an anti-cancer agent, an anti-inflammatory agent, an antifungal agent, an antibacterial agent, an anti-parasitic agent, an anti-viral agent, an anesthetic agent. In certain embodiments a drug moiety is selected from a V-ATPase inhibitor, a HSP90 inhibitor, an IAP inhibitor, an mTor inhibitor, a microtubule stabilizer, a microtubule destabilizers, an auristatin, a dolastatin, a maytansinoid, a MetAP (methionine aminopeptidase), an inhibitor of nuclear export of proteins CRM1, a DPPIV inhibitor, an inhibitors of phosphoryl transfer reactions in mitochondria, a protein synthesis inhibitor, a kinase inhibitor, a CDK2 inhibitor, a CDK9 inhibitor, a proteasome inhibitor, an EG5 inhibitor, an HDAC inhibitor, a DNA damaging agent, a DNA alkylating agent, a DNA intercalator, a DNA minor groove binder and a DHFR inhibitor. Suitable examples include auristatins such as MMAE and MMAF; calicheamycins such as gamma-calicheamycin; and maytansinoids such as DM1 and DM4. Methods for attaching each of these to a linker compatible with the antibodies and method of the invention are known in the art. See, e.g., Singh et al., Therapeutic Antibodies: Methods and Protocols, vol. 525, 445-457 (2009). In addition a terminal group can be a biophysical probe, a fluorophore, a spin label, an infrared probe an affinity probe, a chelator, a spectroscopic probe, a radioactive probe, a lipid molecule, a polyethylene glycol, a polymer, a spin label, DNA, RNA, a protein, a peptide, a surface, an antibody, an antibody fragment, a nanoparticle, a quantum dot, a liposome, a PLGA particle, or a polysaccharide. In embodiments wherein the terminal group is a surface, such solid supports include, but are not limited to, glass, cellulose, polyacrylamide, nylon, polystyrene, polyvinyl chloride or polypropylene.

“Tumor” refers to neoplastic cell growth and proliferation, whether malignant or benign, and all pre-cancerous and cancerous cells and tissues.

The term “anti-tumor activity” means a reduction in the rate of tumor cell proliferation, viability, or metastatic activity. A possible way of showing anti-tumor activity is to show a decline in growth rate of abnormal cells that arises during therapy or tumor size stability or reduction. Such activity can be assessed using accepted in vitro or in vivo tumor models, including but not limited to xenograft models, allograft models, MMTV models, and other known models known in the art to investigate anti-tumor activity.

The term “malignancy” refers to a non-benign tumor or a cancer. As used herein, the term “cancer” includes a malignancy characterized by deregulated or uncontrolled cell growth. Exemplary cancers include: carcinomas, sarcomas, leukemias, and lymphomas.

The term “cancer” includes primary malignant tumors (e.g., those whose cells have not migrated to sites in the subject's body other than the site of the original tumor) and secondary malignant tumors (e.g., those arising from metastasis, the migration of tumor cells to secondary sites that are different from the site of the original tumor).

The term “insertion” in the context of inserting a peptide tag into an antibody means the incorporation of a peptide tag between two specific residues of an antibody. The total number of residues of the antibody is increased by the number of inserted tag residues.

The term “grafting” in the context of incorporating a peptide tag into an antibody refers to the incorporation of a peptide tag into an antibody by mutagenesis. For instance, a short stretch of amino acid residues within a non-CDR loop is substituted by a peptide sequence. In this case, the total number of residues of the antibody remains unchanged. In some embodiments, the term “grafting” also encompasses a combination of substitution and insertion of peptide tag residues. For example, one part of the peptide tag is incorporated by substitution of structural loop residues, while the remaining part is inserted between specific residues of the non-CDR loop. The total number of residues of the IgG antibody is increased by a number that is smaller than the number of tag residues.

BRIEF DESCRIPTION OF THE FIGURES

FIG. 1. Schematic description of 4′-phosphopantetheinyl transferase (PPTase)-mediated generation of ADCs.

FIG. 2A-2B. Design of IgG1 constructs which contain peptide tags for site-specific antibody labeling via post-translational 4′-phosphopantetheinylation. (A) IgG1 constructs contain peptide tags (underlined) in the V_H, CH1, and CH3 domains. (B) IgG1 constructs contain peptide tags (underlined) in the CH3, V_L, and C_L domains. Designed constructs that were successfully cloned are marked by a plus (+) sign in the left column. Unsuccessful cloning is indicated by a minus (−) sign. Successfully cloned constructs are grouped as non-expressors (−) and expressors (+) (middle column). Expressors which do not show any detectable Sfp-catalyzed product formation in the presence of CoA-MC-MMAF substrate (acetyl-CoA substrate was used for SEQ ID NOs: 28, 105, 118, 120, 123, and 126) are marked with a minus (−) sign in the right column. Very low but detectable formation of the respective MC-MMAF ADC is indicated with a plus (+) symbol. Significantly more efficient but non-quantitative MC-MMAF ADC formation is indicated by a double plus (++) sign. Quantitatively generated MC-MMAF ADCs with two terminal groups (TGs) are classified with a triple plus (+++) rating (according to HPLC analysis).

FIG. 3A-3B. (A) Sequence of CH1 domain, CH2 domain, CH3 domain, and hinge region of the Ig gamma 1 heavy chain. (B) Sequence of C_L domain of the Ig kappa light chain. Underlined amino acids are structural loops. Amino acid positions are numbered according to the EU numbering system as described in Edelman et al., Proc. Natl. Acad. USA 63:78-85 (1969). X′₁, X′₂, X′₃, X′₄, X′₅, and X′₆ indicate residues that are present at allotypic positions within the IgG1 subclass and the kappa isotype (according to Jefferis et al., MAbs. 1:332-338 (2009)).

FIG. 4A-4B. (A) Sequence alignment of CH1 domain, CH2 domain, CH3 domain, and hinge region of the four human Ig gamma subclasses with Trastuzumab. (B) Sequence alignment of C_L domain with Trastuzumab. Underlined residues belong to structural loops (see also FIG. 3). Boxed residues indicate allotypic positions according to Jefferis et al., MAbs. 1:332-338 (2009). For simplicity, only the allotypic positions within the IgG1 subclass and the kappa isotype are shown. Protein sequences of the human Ig gamma subclasses and the human kappa isotype are derived from the UniProt database (entry numbers P01857, P01859, P01860, P01861, and P01834).

FIG. 5A-5H. HPLC characterization of Sfp-catalyzed ADC formation. (A) HPLC trace confirming the near quantitative formation of the immunoconjugate anti-hHER2-HC-T359-GDS-ppan-MC-MMAF-LSWLLRLLN-K360. (B) HPLC trace confirming the near quantitative formation of the immunoconjugate anti-hHER2-HC-E388-GDS-ppan-MC-MMAF-LSWLLRLLN-N389. (C) HPLC trace confirming the near quantitative formation of the immunoconjugate anti-hHER2-HC-V2-DS-ppan-MC-MMAF-LEFIASKLA-Q3. (D) HPLC trace confirming the quantitative formation of the immunoconjugate anti-hHER2-HC-V2-GDS-ppan-MC-MMAF-LSWLLRLLN-Q3. (E) HPLC trace confirming the near quantitative formation of the immunoconjugate anti-hHER2-HC-E388-DS-ppan-MC-MMAF-LEFIASKL-N389. (F) HPLC trace confirming the quantitative formation of the immunoconjugate anti-hHER2-HC-E388-DS-ppan-MC-MMAF-LEFIASKLA-N389. (G) HPLC trace confirming the near quantitative formation of the immunoconjugate mAb2-HC-T359-GDS-ppan-MC-MMAF-LSWLLRLLN-K360. (H) HPLC trace exemplifying partial formation of the immunoconjugate anti-hHER2-LC-12-DS-ppan-MC-MMAF-LEFIASKLA-Q3.

FIG. 6A-6C. Characterization of three trastuzumab immunoconjugates by analytical size-exclusion chromatography (AnSEC) exemplifies the formation of monomeric, non-aggregated ADCs. (A) AnSEC analysis of the immunoconjugate anti-hHER2-HC-V2-GDS-ppan-MC-MMAF-LSWLLRLLN-Q3. (B) AnSEC analysis of the immunoconjugate anti-hHER2-HC-E388-DS-ppan-MC-MMAF-LEFIASKLA-N389. (C) AnSEC analysis of the immunoconjugate anti-hHER2-HC-E388-DS-ppan-MC-MMAF-LEFIASKL-N389.

FIG. 7. HPLC characterization of unsuccessful labeling of trastuzumab with incorporation of a peptide tag at a specific location. HPLC trace indicating no conjugation between anti-hHER2-HC-S190D-S191-S192L-L193E-G194F-T1951-Q196A-T197S-Y198K-1199L and CoA-MC-MMAF.

FIG. 8A-8B. HPLC characterization of the labeling of mixed grafting/insertion constructs with CoA-MC-MMAF. (A) HPLC trace indicating partial formation of the immunoconjugate anti-hHER2-HC-S63-ppan-MC-MMAF-V64L-EFIASKLA-K65. (B) HPLC trace indicating no formation of the immunoconjugate anti-hHER2-LC-S76D-S77-ppan-MC-MMAF-L78-EFIASKLA-Q79.

FIG. 9A-9B. HPLC characterization of fluorophore attachment to IgGs. (A) HPLC trace confirming the near quantitative formation of the antibody-fluorophore conjugate anti-hHER2-HC-P189G-S190D-S191-ppan-maleimidoethylamido-TMR-S192L-L193S-G194W-T195L. The extensive overlap between the HPLC traces monitored at 280 and 555 nm indicates near quantitative fluorophore conjugation. (B) HPLC trace confirming the near quantitative formation of the antibody-fluorophore conjugate anti-hHER2-HC-T359-GDS-ppan-maleimidoethylamido-TMR-LSWLLRLLN-K360. The extensive overlap between the HPLC traces monitored at 280 and 555 nm indicates near quantitative fluorophore conjugation.

FIG. 10A-10B. HPLC characterization of antibody labeling with hydrolyzed maleimido- or bromoacetyl thioether-linked cytotoxins. (A) HPLC trace confirming the near quantitative conjugation of maleimide-ring-opened CoA-MC-MMAF to hHER2-HC-T359-GDSLSWLLRLLN-K360. (B) HPLC trace confirming the near quantitative conjugation of CoA-Ac-Ahx-MMAF to hHER2-HC-T359-GDSLSWLLRLLN-K360.

FIG. 11A-11B. HPLC characterization of antibody labeling with cytotoxins connected via a cleavable linker. (A) HPLC trace confirming the near quantitative conjugation of CoA-MC-Val-Cit-PABC-MMAF to anti-hHER2-HC-T359-GDSLSWLLRLLN-K360. (B) HPLC trace confirming the near quantitative conjugation of CoA-MC-Val-Cit-PABC-MMAF to anti-hHER2-HC-E388-GDSLSWLLRLLN-N389.

FIG. 12. Optimization of 4′-phosphopantetheinyl transferase (PPTase)-catalyzed ADC formation as a function of pH. The bar graph representation shows the amount of generated ADC with a drug-to-antibody ratio (DAR) of 2 as a function of pH. The data is based on the HPLC analysis (280 nm) of the reaction of CoA-MC-MMAF with either anti-hHER2-HC-T359-GDSLSWLLRLLN-K360 or anti-hHER2-HC-E388-GDSLSWLLRLLN-N389 at a pH range of 5.0 to 10.0.

FIG. 13A-13C. Optimization of conjugation reaction as a function of Sfp enzyme concentration in 50 mM HEPES buffer (pH 7.5) containing 2.5 μM antibody, 50 μM CoA-MC-MMAF, and 10 mM MgCl₂ (37° C., 16 hours). (A) Deconvoluted mass spectrum showing primarily unconjugated anti-hHER2-HC-E388-GDSLSWLLRLLN-N389 at an Sfp concentration of 0.1 μM. (B) Deconvoluted mass spectrum showing near quantitative ADC formation of anti-hHER2-HC-E388-GDS-ppan-MC-MMAF-LSWLLRLLN-N389 at an Sfp concentration of 0.25 μM. (C) Deconvoluted mass spectrum showing near quantitative ADC formation of anti-hHER2-HC-E388-GDS-ppan-MC-MMAF-LSWLLRLLN-N389 at an Sfp concentration of 0.5 μM.

FIG. 14A-14B. Optimization of enzymatic conjugation reaction as a function of CoA-MC-MMAF substrate concentration at pH 8.0. (A) The HPLC traces represent three conjugation reactions with 2.5 μM anti-hHER2-HC-E388-GDSLSWLLRLLN-N389 that contained 2.5 μM (top trace), 7.5 μM (middle trace), or 25 μM (bottom trace) of CoA-MC-MMAF. The peak at a retention time of 4.9 min corresponds to unlabeled antibody (DAR=0), the peak at 5.3 min to mono-labeled antibody (DAR=1), and the peak at 5.7 min to bi-labeled antibody (DAR=2). (B) The bar graph representation shows the amount of generated ADC with a DAR of 2 as a function of CoA-MC-MMAF substrate concentration. The titration series was performed at an Sfp enzyme concentration of either 0.25 μM (black bars) or 1.0 μM (white bars).

FIG. 15A-15C. Thermal stability of peptide-tagged ADCs as measured by differential scanning fluorometry (DSF) using SYPRO Orange gel stain. (A) Determination of the thermal stability of the immunoconjugate anti-hHER2-HC-T359-GDS-ppan-MC-MMAF-LSWLLRLLN-K360. Two transition temperatures of 68.5 and 81.5 degrees Celsius are observed by DSF (average of two measurements). (B) Determination of the thermal stability of the immunoconjugate anti-hHER2-HC-E388-GDS-ppan-MC-MMAF-LSWLLRLLN-N389. Two transition temperatures of 66.3 and 81.0 degrees Celsius are observed by DSF (single measurement). (C) Determination of the thermal stability of unmodified Trastuzumab IgG1 (anti-hHER2) which was used as reference for comparison with peptide-tagged ADCs. Two transition temperatures of 69.7 and 81.1 degrees Celsius are observed by DSF (average of two measurements).

FIG. 16A-16B. Pharmacokinetic (PK) study of two peptide-tagged Trastuzumab immunoconjugates. Plasma titers of both ADCs were determined by capturing the respective immunoconjugates with plate-absorbed human HER2 (extracellular domains 3-4) followed by detection with anti-human IgG and anti-MMAF antibodies. (A) Comparison of plasma titers of anti-hHER2-HC-T359-GDS-ppan-MC-MMAF-LSWLLRLLN-K360 and unmodified Trastuzumab (anti-hHER2) antibody by ELISA. The plasma titer of the immunoconjugate exhibits a rapid decay within 4 days. (B) Comparison of plasma titers of anti-hHER2-HC-E388-GDS-ppan-MC-MMAF-LSWLLRLLN-N389 and unmodified Trastuzumab (anti-hHER2) antibody by ELISA. The plasma titer of the immunoconjugate closely parallels the control titer of the unmodified anti-hHER2 antibody within a 14 day period.

FIG. 17. In vitro cell-killing assay of peptide-tagged immunoconjugates using the HER2-expressing MDA-231 cell line. Plots are based on cell viability measurements using the Cell Titer Glo Luminescent Cell Viability Assay (Promega).

FIG. 18A-18B. Enzymatic generation of ADCs with a DAR of 4. (A) ADCs with a DAR of 4 can be generated by incorporating multiple peptide tags into an antibody, such as the ybbR- and the S6-tags. (B) HPLC analysis of Sfp-catalyzed conjugation of CoA-MC-MMAF to Trastuzumab IgG containing an S6 tag in the V_H domain as well as a ybbR tag in the CH3 domain (anti-hHER2-HC-V2-GDSLSWLLRLLN-Q3-E388-DSLEFIASKLA-N389). Room temperature incubation of 2.5 μM of antibody and 50 μM of CoA substrate in the presence of 1 μM of Sfp enzyme leads to near quantitative formation of an ADC with a DAR of 4 (t_R=6.1 min, bottom trace). The top trace represents the corresponding uncoupled antibody (DAR=0, t_R=5.2 min).

FIG. 19A-19F. Pharmacokinetic profiles of peptide-tagged trastuzumab immunoconjugates displaying high and low AUC IgG values. Each of the six peptide-tagged ADCs corresponding to SEQ ID NO:248 (A), SEQ ID NO:33 (B), SEQ ID NO:251 (C), SEQ ID NO:218 (D), SEQ ID NO:202 (E), and SEQ ID NO:244 (F) was administered intravenously into three mice at a single dose of 1 mg/kg. After collection of plasma samples over a time period of 340 hours, trastuzumab ADC molecules were captured by using the immobilized extracellular domain of human HER2. Plasma titers were then determined by two ELISA formats based on either anti-MMAF or anti-hlgG antibodies. While the first format provides readout on the concentration of “intact” ADC, the latter format generates a signal proportional to the concentration of total IgG, comprising both conjugated and unconjugated trastuzumab molecules. A-C exemplify PK curves of peptide-tagged MMAF ADCs displaying high AUC IgG values, whereas D-F show examples of immunoconjugates exhibiting very low AUC IgG values. In all cases, anti-MMAF and anti-hlgG titers closely parallel each other indicating negligible deconjugation of the MMAF payload during the time course of the PK study.

FIG. 20. In vivo efficacy study of the ybbR-tagged trastuzumab ADC anti-hHER2-HC-E388-DS-ppan-MC-MMAF-LEFIASKLA-N389 (SEQ ID NO:129) in immune-deficient nude mice implanted with a human tumor cell line. The xenograft tumor model was performed with nu/nu mice which were subcutaneously administered with the HER2-dependent breast cancer cell line MDA-MB231 clone 16. After the tumor has grown to a size of about 200 mm³, single doses of 3 mg/kg (▴), 5 mg/kg () of the ybbR-tagged ADC or vehicle alone (−) were intravenously injected into nine mice per treatment group. The vertical arrow indicates the time point of ADC administration. Weekly monitoring of tumor growth revealed that both dose levels resulted in tumor regression demonstrating in vivo efficacy of the peptide-tagged ADC.

DETAILED DESCRIPTION

The present invention provides methods of site-specific labeling of antibodies, using proteins having 4′-phosphopantetheinyl transferase activity (“PPTases”) that catalyze post-translational modification of peptide sequences (“peptide tags”) incorporated into one or more specific sites of an antibody of interest. Enzymatic labeling under ambient reaction conditions enables quantitative and irreversible covalent modification of a specific serine residue within the peptide tags incorporated into the antibody, and thus creates desirable antibody conjugates.

Given the broad substrate tolerance of PPTases, site-specific antibody labeling according to the present invention can be achieved with a variety of chemically accessible labeling reagents, such as anti-cancer agents, fluorophores, peptides, sugars, detergents, polyethylene glycols, immune potentiators, radio-imaging probes, prodrugs, and other molecules. Furthermore, PPTases can be used to immobilize peptide-tagged antibodies on solid support, such as polystyrene nanoparticles and gold surfaces (see, e.g., Wong et al., Org. Biomol. Chem. 8: 782-787, 2010; Wong et al., Nanoscale 4:659-666, 2012, for methodology of immobilization of functional enzymes).

Accordingly, the present invention provides methods of preparation of homogeneous immunoconjugates with a defined drug-to-antibody ratio for use in cancer therapy, and immunoconjugates prepared thereby, as well as pharmaceutical compositions comprising these immunoconjugates. The methods of the instant invention can be used in combination with other conjugation methods known in the art.

1. Antibody Engineering

Site-Specific Labeling

A “structural loop” or “non-CDR-loop” according to the present invention is to be understood in the following manner: antibodies are made of domains with immunoglobulin folds. In essence, anti-parallel beta sheets are connected by loops to form a compressed antiparallel beta barrel. In the variable region, some of the loops of the domains contribute essentially to the specificity of the antibody, i.e., the binding to an antigen. These loops are called “CDR-loops.” All other loops of antibody domains are rather contributing to the structure of the molecule and/or the effector function. These loops are defined herein as “structural loops” or “non-CDR-loops.”

The antibodies (e.g., a parent or native antibody, optionally containing one or more non-naturally occurring amino acids) of the present invention are numbered according to the EU numbering system as set forth in Edelman et al., Proc. Natl. Acad. USA 63:78-85 (1969). Human IgG1 constant region is used as a representative throughout the application. However, the invention is not limited to human IgG1; corresponding amino acid positions can be readily deduced by sequence alignment. For example, FIG. 3 (A) shows IgG1 heavy chain constant region where the structural loops are underlined, these underlined structural loops can be readily identified for IgG2, IgG3, and IgG4 as shown in the sequence alignment of FIG. 4 (A). FIG. 3 (B) shows the light chain constant region where the structural loops are underlined. For the light chain constant region, IgG1, IgG2, IgG3 and IgG4 are the same. Table 1 below lists the amino acid positions in the structural loop of IgG1, IgG2, IgG3 and IgG4, respectively.

TABLE 1
Identified Structural Loop Positions (IgG1 according to EU numbering)
	IgG1	IgG2	IgG3	IgG4
Heavy	119(S)120(T)121(K)	119(S)120(T)121(K)	119(S)120(T)121(K)	119(S)120(T)121(K)
Chain	131(S)132(S)133(K)	131(C)132(S)133(R)	131(C)132(S)133(R)	131(C)132(S)133(R)
	134(S)135(T)136(S)	134(S)135(T)136(S)	134(S)135(T)136(S)	134(S)135(T)136(S)
	137(G)138(G)139(T)	137(E)138(S)139(T)	137(G)138(G)139(T)	137(E)138(S)139(T)
	152(E)153(P)154(V)	152(E)153(P)154(V)	152(E)153(P)154(V)	152(E)153(P)154(V)
	159(N)160(S)161(G)	159(N)160(S)161(G)	159(N)160(S)161(G)	159(N)160(S)161(G)
	162(A)163(L)164(T)	162(A)163(L)164(T)	162(A)163(L)164(T)	162(A)163(L)164(T)
	165(S)166(G)	165(S)166(G)	165(S)166(G)	165(S)166(G)
	171(P)172(A)	171(P)172(A)	171(P)172(A)	171(P)172(A)
	176(S)177(S)178(G)	176(S)177(S)178(G)	176(S)177(S)178(G)	176(S)177(S)178(G)
	189(P)190(S)191(S)	189(P)190(S)191(S)	189(P)190(S)191(S)	189(P)190(S)191(S)
	192(S)193(L)194(G)	192(N)193(F)194(G)	192(S)193(L)194(G)	192(S)193(L)194(G)
	195(T)196(Q)197(T)	195(T)196(Q)197(T)	195(T)196(Q)197(T)	195(T)196(K)197(T)
	205(K)206(P)207(S)	205(K)206(P)207(S)	205(K)206(P)207(S)	205(K)206(P)207(S)
	208(N)	208(N)	208(N)	208(N)
	230(P)231(A)232(P)	227(P)228(A)229(P)	277(P)278(A)279(P)	227(P)228(A)229(P)
	233(E)234(L)235(L)	230(P)231(V)232(A)	280(E)281(L)282(L)	230(E)231(F)232(L)
	236(G)236(G)	233(G)	283(G)284(G)	233(G)234(G)
	244(P)245(P)246(K)	240(P)241(P)242(K)	291(P)292(P)293(K)	241(P)242(P)243(K)
	253(I)254(S)255(R)	249(I)250(S)251(R)	300(I)301(S)302(R)	250(I)251(S)252(R)
	256(T)257(P)258(E)	252(T)253(P)254(E)	303(T)304(P)305(E)	253(T)254(P)255(E)
	267(S)268(H)269(E)	263(S)264(H)265(E)	314(S)315(H)316(E)	264(S)265(Q)266(E)
	270(D)271(P)272(E)	266(D)267(P)268(E)	317(D)318(P)319(E)	267(D)268(P)269(E)
	280(D)281(G)	276(D)277(G)	327(D)328(G)	277(D)278(G)
	285(H)286(N)287(A)	281(H)282(N)283(A)	332(H)333(N)334(A)	282(H)283(N)284(A)
	291(P)292(R)	287(P)288(R)	338(P)339(R)	288(P)289(R)
	295(Q)296(Y)297(N)	291(Q)292(F)293(N)	342(Q)343(Y)344(N)	292(Q)293(F)294(N)
	298(S)299(T)	294(S)295(T)	345(S)346(T)	295(S)296(T)
	307(T)308(V)309(L)	303(T)304(V)305(V)	354(T)355(V)356(L)	304(T)305(V)306(L)
	310(H)311(Q)	306(H)307(Q)	357(H)358(Q)	307(H)308(Q)
	315(N)316(G)317(K)	311(N)312(G)313(K)	362(N)363(G)364(K)	312(N)313(G)314(K)
	318(E)	314(E)	365(E)	315(E)
	326(K)327(A)328(L)	322(K)323(G)324(L)	373(K)374(A)375(L)	323(K)324(G)325(L)
	329(P)330(A)331(P)	325(P)326(A)327(P)	376(P)377(A)378(P)	326(P)327(S)328(S)
	339(A)340(K)341(G)	335(T)336(K)337(G)	386(T)387(K)388(G)	336(A)337(K)338(G)
	342(Q)343(P)344(R)	338(Q)339(P)340(R)	389(Q)390(P)391(R)	339(Q)340(P)341(R)
	345(E)	341(E)	392(E)	342(E)
	355(R)356(D/E)	351(R)352(E)353(E)	402(R)403(E)404(E)	352(Q)353(E)354(E)
	357(E)358(L/M)	354(M)355(T)356(K)	405(M)406(T)407(K)	355(M)356(T)357(K)
	359(T)360(K)361(N)	357(N)	408(N)	358(N)
	384(N)385(G)	380(N)381(G)	431(S)432(G)	381(N)382(G)
	388(E)389(N)390(N)	384(E)385(N)386(N)	435(E)436(N)437(N)	385(E)386(N)387(N)
	394(T)395(P)396(P)	390(T)391(P)392(P)	441(T)442(P)443(P)	391(T)392(P)393(P)
	399(D)400(S)401(D)	395(D)396(S)397(D)	446(D)447(S)448(D)	396(D)397(S)398(D)
	402(G)	398(G)	449(G)	399(G)
	415(S)416(R)	411(S)412(R)413(W)	462(S)463(R)464(W)	412(S)413(R)414(W)
	417(W)418(Q)	414(Q)415(Q)416(G)	465(Q)466(Q)467(G)	415(Q)416(E)417(G)
	419(Q)420(G)	417(N)418(V)	468(N)469(I)	418(N)419(V)
	421(N)422(V)
	433(H)434(N)435(H)	429(H)430(N)431(H)	480(H)481(N)482(R)	430(H)431(N)432(H)
	442(S)443(L)444(S)	438(S)439(L)440(S)	489(S)490(L)491(S)	439(S)440(L)441(S)
	445(P)446(G)	441(P)442(G)	492(P)493(G)	442(L)443(G)
Light	109(T)110(V)111(A)	109(T)110(V)111(A)	109(T)110(V)111(A)	109(T)110(V)111(A)
Chain	112(A)	112(A)	112(A)	112(A)
	119(P)120(P)121(S)	119(P)120(P)121(S)	119(P)120(P)121(S)	119(P)120(P)121(S)
	122(D)123(E)	122(D)123(E)	122(D)123(E)	122(D)123(E)
	140(Y)141(P)142(R)	140(Y)141(P)142(R)	140(Y)141(P)142(R)	140(Y)141(P)142(R)
	143(E)144(A)	143(E)144(A)	143(E)144(A)	143(E)144(A)
	151(D)152(N)153(A)	151(D)152(N)153(A)	151(D)152(N)153(A)	151(D)152(N)153(A)
	154(L)155(Q)156(S)	154(L)155(Q)156(S)	154(L)155(Q)156(S)	154(L)155(Q)156(S)
	161(E)162(S)163(V)	161(E)162(S)163(V)	161(E)162(S)163(V)	161(E)162(S)163(V)
	164(T)165(E)166(Q)	164(T)165(E)166(Q)	164(T)165(E)166(Q)	164(T)165(E)166(Q)
	167(D)168(S)	167(D)168(S)	167(D)168(S)	167(D)168(S)
	197(T)198(H)199(Q)	197(T)198(H)199(Q)	197(T)198(H)199(Q)	197(T)198(H)199(Q)
	200(G)201(L)202(S)	200(G)201(L)202(S)	200(G)201(L)202(S)	200(G)201(L)202(S)
	203(S)204(P)	203(S)204(P)	203(S)204(P)	203(S)204(P)
	207(K)208(S)	207(K)208(S)	207(K)208(S)	207(K)208(S)

FIG. 3 as well as SEQ ID NOs 25 and 93 represent the sequences of the Ig kappa light chain constant region and the Ig gamma-1 heavy chain constant region, respectively. X′₁, X′₂, X′₃, X′₄, X′₅, and X′₆ in SEQ ID NOs: 25 and 93 indicate residues that are present at allotypic positions within the IgG1 subclass and the kappa isotype (according to Jefferis et al., MAbs. 1:332-338 (2009)). X′₁ can be Arg or Lys, X′₂ can be Asp or Glu, X′₃ can be Leu or Met, X′₄ can be Ala or Gly, X′₅ can be Val or Ala, and X′₆ can be Leu or Val.

Because of the high sequence homology of constant regions of IgG1, IgG2, IgG3 and IgG4 antibodies, findings of the invention are not limited to any specific antibodies. In addition, the findings of the invention are not limited to using PPTases. The positions in the antibody structural loops identified herein can also be used for incorporating other peptide tags, which are substrates for other enzymatic conjugation approaches such as the enzyme biotin protein ligase (BPL), transglutaminases, and formylglycine forming enzymes.

In one aspect, the present invention provides immunoconjugates comprising a modified antibody or an antigen binding fragment thereof, and a terminal group, wherein said modified antibody or antigen binding fragment thereof comprises a peptide tag that by itself is a substrate of a 4′-phosphopantetheinyl transferase, and wherein said peptide tag is located within a structural loop, or C- or N-terminus of the modified antibody or antigen binding fragment thereof. The present invention also provides modified antibodies or antigen binding fragments thereof comprising a peptide tag that is a substrate of a 4′-phosphopantetheinyl transferase, and wherein said peptide tag is located within a structural loop, or C- or N-terminus of the antibody or antigen binding fragment thereof. In a specific embodiment, said peptide tag is one or more peptides selected from those described in Table 2. In one aspect, the peptide tag is inserted between two amino acids of a structural loop of said antibody or antigen binding fragment thereof. In another aspect, the peptide tag is grafted into a structural loop, C- or N-terminus of said antibody or antigen binding fragment thereof, wherein the peptide tag replaces one or more amino acids of the parent antibody or antigen binding fragment thereof. In one aspect, the structural loop refers to a structural loop located at the CH1, CH2, CH3, or C_L region of said antibody or antigen binding fragment thereof. The modified antibody heavy chain and/or light chain (or antigen binding fragment thereof) may contain 1, 2, 3, 4, 5, 6, 7, 8, or more protein tags in its structural loops. In one aspect, the modified antibodies or antigen binding fragments contain 2, 4, 6, 8, or more protein tags in its structural loops. In another aspect, said 4′-phosphopantetheinyl transferase is Sfp, AcpS, T. maritima PPTase, human PPTase, or a mutant form thereof that retains the 4′-phosphopantetheinyl transferase activity. In one aspect, said 4′-phosphopantetheinyl transferase originates from Homo sapiens, Bacillus subtilis, Escherichia coli, Thermotoga maritima, Clostridium thermocellum, as well as any other mammalian, bacterial or fungal genome. In another aspect, said 4′-phosphopantetheinyl transferase is a homologous protein to Sfp, AcpS, Tmaritima PPTase, human PPTase, or a mutant thereof. In one embodiment, said 4′-phosphopantetheinyl transferase is from a thermophilic organism. In some embodiments, the parental antibody (antibody without incorporating the peptide tag) is an IgG, IgM, IgE, or IgA antibody. In some embodiments, the parental antibody is an IgG1 antibody. In some other embodiments, the parental antibody is an IgG2, IgG3, or IgG4 antibody.

“A substrate of 4′-phosphopantetheinyl transferase” as used herein means the structure being described can serve as an acceptor for a 4′-phosphopantetheine (ppan) or modified ppan group as illustrated in Scheme Ia herein when contacted with 4′-phosphopantetheinyl transferase and CoA or a CoA analog having a terminal group attached to it.

In one aspect, the present invention provides immunoconjugates comprising a modified antibody or an antigen binding fragment thereof, and a terminal group, wherein said modified antibody or antigen binding fragment thereof comprises a CH1, CH2, CH3, and/or C_L region, and wherein said CH1, CH2, CH3, and/or C_L region further comprises a peptide tag that by itself is a substrate of a 4′-phosphopantetheinyl transferase. The present invention also provides modified antibodies or antigen binding fragments thereof comprising a CH1, CH2, CH3, and/or C_L region, and wherein said CH1, CH2, CH3, and/or C_L region further comprises a peptide tag that is a substrate of a 4′-phosphopantetheinyl transferase. In some embodiments, said peptide tag is one or more peptides selected from those described in Table 2. In some embodiments, the peptide tag is inserted between two amino acids of a structural loop of said antibody or antigen binding fragment thereof. In some embodiments, the peptide tag is grafted into a structural loop of said antibody or antigen binding fragment thereof. The modified antibody heavy chain and/or light chain (or antigen binding fragment thereof) may contain 1, 2, 3, 4, 5, 6, 7, 8, or more protein tags in its structural loops. In some embodiments, the modified antibodies or antigen binding fragments contain 2, 4, 6, 8, or more protein tags in its structural loops. In some embodiments, said 4′-phosphopantetheinyl transferase is Sfp, AcpS, T. maritima PPTase, human PPTase, or a mutant form thereof that retains the 4′-phosphopantetheinyl transferase activity. In some embodiments, said 4′-phosphopantetheinyl transferase originates from Homo sapiens, Bacillus subtilis, Escherichia coli, Thermotoga maritima, Clostridium thermocellum, as well as any other mammalian, bacterial or fungal genome. In some embodiments, said 4′-phosphopantetheinyl transferase is a homologous protein to Sfp, AcpS, Tmaritima PPTase, or a mutant thereof. In one embodiment, said 4′-phosphopantetheinyl transferase is from a thermophilic organism. In some embodiments, the parental antibody is an IgG, IgM, IgE, or IgA antibody. In a specific embodiment, the parental antibody is an IgG1 antibody. In some embodiments, the parental antibody is an IgG2, IgG3, or IgG4 antibody.

As used herein, “retains” activity means the enzyme being described maintains at least about 10% of the activity of the reference material, which is the B. subtilis Sfp 4′-phosphopantetheinyl transferase (see, e.g., Quadri et al., Biochemistry 37: 1585-1595 (1998)). For example, a different 4′-phosphopantetheinyl transferase or a mutant form of the enzyme retains at least about 10% of the 4′-phosphopantetheinyl transferase activity compared to Sfp under identical reaction conditions, i.e., using the same CoA substrate, the same peptide-tagged antibody, identical buffer conditions, identical substrate and enzyme concentrations, the same temperature, and the same reaction duration.

In one aspect, the present invention provides immunoconjugates comprising a modified antibody or an antigen binding fragment thereof, and a terminal group, wherein said modified antibody or antigen binding fragment thereof comprises a peptide tag that by itself is a substrate of a 4′-phosphopantetheinyl transferase, and wherein said peptide tag is inserted between positions 2 and 3 of the V_H domain, positions 63 and 64 of the V_H domain, positions 64 and 65 of the V_H domain, positions 138 and 139 of the CH1 domain, positions 197 and 198 of the CH1 domain, positions 359 and 360 of the CH3 domain, positions 388 and 389 of the CH3 domain, the C-terminus of the CH3 domain (after Lys447), and/or positions 2 and 3 of the V_L domain of a parental antibody or antigen binding fragment thereof. In another aspect, the present invention provides immunoconjugates comprising a modified antibody or antigen binding fragment thereof, and a terminal group, wherein said modified antibody or antigen binding fragment thereof comprises a peptide tag that by itself is a substrate of a 4′-phosphopantetheinyl transferase, and wherein the peptide tag is inserted between amino acid residues 2 and 3 of the VH or VL domain, or between amino acid residue 110 and 111 of the light chain, or between 119 and 120, or between 120 and 121, or between 135 and 136, or between 136 and 137, or between 138 and 139, or between 164 and 165, or between 165 and 166, or between 194 and 195 of the CH1 domain, or between 388 and 389, or between 445 and 446, or between 446 and 447 of the CH3 domain of a parental antibody or antigen binding fragment thereof. In some embodiments, the peptide tag is inserted between amino acid residue 110 and 111 of the light chain, or between 119 and 120, or between 120 and 121, or between 135 and 136, or between 136 and 137, or between 138 and 139, or between 165 and 166 of the CH1 domain, or between 388 and 389 of the CH3 domain of a parental antibody or antigen binding fragment thereof,

In one aspect, the invention provides immunoconjugates comprising a modified antibody or an antigen binding fragment thereof, and a terminal group, wherein said modified antibody or antigen binding fragment thereof comprises SEQ ID NO: 103, SEQ ID NO: 109, SEQ ID NO:113, SEQ ID NO:121, SEQ ID NO:122, SEQ ID NO:127, SEQ ID NO:129, SEQ ID NO:130, SEQ ID NO:131, and/or SEQ ID NO:141. In another aspect, the invention provides immunoconjugates comprising a modified antibody or an antigen binding fragment thereof, and a terminal group, wherein said modified antibody or antigen binding fragment comprises comprises SEQ ID NO:26, SEQ ID NO:27, SEQ ID NO:32, SEQ ID NO:63, SEQ ID NO:94, SEQ ID NO:95, SEQ ID NO:96, SEQ ID NO:126, SEQ ID NO:127, SEQ ID NO:129, SEQ ID NO:130, SEQ ID NO:131, SEQ ID NO:132, SEQ ID NO:139, SEQ ID NO:149, SEQ ID NO:151, SEQ ID NO:152, SEQ ID NO:157, SEQ ID NO:158, SEQ ID NO:160, SEQ ID NO:168, SEQ ID NO:169, SEQ ID NO:178, SEQ ID NO:248, SEQ ID NO:250, SEQ ID NO:251, SEQ ID NO:256, SEQ ID NO:257, SEQ ID NO:259, SEQ ID NO:267, SEQ ID NO:268, SEQ ID NO:277, SEQ ID NO:348, SEQ ID NO:349, SEQ ID NO:356, SEQ ID NO:358, SEQ ID NO:359, SEQ ID NO:364, SEQ ID NO:365, SEQ ID NO:367, SEQ ID NO:373, SEQ ID NO:374, SEQ ID NO:380, SEQ ID NO:384, SEQ ID NO:386, SEQ ID NO:387, or SEQ ID NO:388. In some embodiments, the modified antibody or antigen binding fragment comprises SEQ ID NO:32, SEQ ID NO:63, SEQ ID NO:127, SEQ ID NO:129, SEQ ID NO:132, SEQ ID NO:151, SEQ ID NO:152, SEQ ID NO:157, SEQ ID NO:158, SEQ ID NO:160, SEQ ID NO:169, SEQ ID NO:250, SEQ ID NO:251, SEQ ID NO:256, SEQ ID NO:257, SEQ ID NO:259, SEQ ID NO:268, SEQ ID NO:358, SEQ ID NO:359, SEQ ID NO:364, SEQ ID NO:365, SEQ ID NO:367, SEQ ID NO:374, or SEQ ID NO:384.

With respect to the immunoconjugates described herein, in one aspect, said peptide tag is one or more peptides selected from those described in Table 2. The modified antibody heavy chain and/or light chain (or antigen binding fragment thereof) may contain 1, 2, 3, 4, 5, 6, 7, 8, or more protein tags in its structural loops. In one embodiment, the modified antibodies or antigen binding fragments contain 2, 4, 6, 8, or more protein tags in its structural loops. In another embodiment, said 4′-phosphopantetheinyl transferase is Sfp, AcpS, T. maritima PPTase, human PPTase, or a mutant form thereof that retains the 4′-phosphopantetheinyl transferase activity. In one embodiment, said 4′-phosphopantetheinyl transferase originates from Homo sapiens, Bacillus subtilis, Escherichia coli, Thermotoga maritima, Clostridium thermocellum, as well as any other mammalian, bacterial or fungal genome. In a specific embodiment, said 4′-phosphopantetheinyl transferase is Sfp and the peptide tag is selected from GDSLSWLLRLLN (SEQ ID NO:1), GDSLSWL (SEQ ID NO:2), DSLEFIASKLA (SEQ ID NO:9), GDSLDMLEWSLM (SEQ ID NO:10), DSLEFIASKL (SEQ ID NO:18), and DSLEFIASK (SEQ ID NO:19). In one embodiment, the parental antibody is an IgG, IgM, IgE, or IgA antibody. In a specific embodiment, the parental antibody is an IgG1 antibody. In another specific embodiment, the parental antibody is an IgG2, IgG3, or IgG4 antibody.

In another aspect, the present invention provides immunoconjugates comprising a modified antibody or an antigen binding fragment thereof, and a terminal group, wherein said modified antibody or antigen binding fragment thereof comprises a peptide tag that by itself is a substrate of a 4′-phosphopantetheinyl transferase, and wherein said peptide tag is grafted into a structural loop, or C- or N-terminus of the antibody or antigen binding fragment thereof. In a specific embodiment, said peptide tag is grafted at amino acid positions from 62 to 64 of the V_H domain (mutations at amino acids 62 and 63, and insertion of the rest of the peptide tag between amino acids 63 and 64), at amino acid positions from 62 to 65 of the V_H domain (mutations at amino acids 62-64, and insertion of the rest of the peptide tag between amino acids 64 and 65); at amino acid positions from 133 to 139 of the CH1 domain (mutations of amino acids 133-138, and insertion of the rest of the peptide tag between amino acids 138-139), amino acid positions from 189 to 195 of the CH1 domain, and/or amino acid positions from 190 to 198 of the CH1 domain (mutations from amino acids 190-197, and insertion of the rest of the peptide tag between 197 and 198) of a parental antibody or antigen binding fragment thereof. In one embodiment, said peptide tag is one or more peptides selected from those described in Table 2. The modified antibody heavy chain and/or light chain (or antigen binding fragment thereof) may contain 1, 2, 3, 4, 5, 6, 7, 8, or more protein tags in its structural loops. In one embodiment, the modified antibodies or antigen binding fragments contain 2, 4, 6, 8, or more protein tags in its structural loops. In another embodiment, said 4′-phosphopantetheinyl transferase is Sfp, AcpS, T. maritima PPTase, human PPTase, or a mutant form thereof that retains the 4′-phosphopantetheinyl transferase activity. In one embodiment, said 4′-phosphopantetheinyl transferase originates from Homo sapiens, Bacillus subtilis, Escherichia coli, Thermotoga maritima, Clostridium thermocellum, as well as any other mammalian, bacterial or fungal genome. In a specific embodiment, said 4′-phosphopantetheinyl transferase is Sfp and the peptide tag is selected from GDSLSWLLRLLN (SEQ ID NO:1), GDSLSWL (SEQ ID NO:2), DSLEFIASKLA (SEQ ID NO:9), GDSLDMLEWSLM (SEQ ID NO:10), DSLEFIASKL (SEQ ID NO:18), and DSLEFIASK (SEQ ID NO:19). In one embodiment, the parental antibody is an IgG, IgM, IgE, or IgA antibody. In a specific embodiment, the parental antibody is an IgG1 antibody. In another specific embodiment, the parental antibody is an IgG2, IgG3, or IgG4 antibody.

In another aspect, the present invention provides modified antibodies or antigen binding fragments thereof comprising a peptide tag that is a substrate of a 4′-phosphopantetheinyl transferase, and wherein said peptide tag is inserted between positions 2 and 3 of the V_H domain, positions 63 and 64 of the V_H domain, positions 64 and 65 of the V_H domain, positions 138 and 139 of the CH1 domain, positions 197 and 198 of the CH1 domain, positions 359 and 360 of the CH3 domain, positions 388 and 389 of the CH3 domain, the C-terminus of the CH3 domain (after Lys447), and/or positions 2 and 3 of the V_L domain of a parental antibody or antigen binding fragment thereof. In another aspect, the peptide tag is inserted between amino acid residues 2 and 3 of the VH or VL domain, or between amino acid residue 110 and 111 of the light chain, or between 119 and 120, or between 120 and 121, or between 135 and 136, or between 136 and 137, or between 138 and 139, or between 164 and 165, or between 165 and 166, or between 194 and 195 of the CH1 domain, or between 388 and 389, or between 445 and 446, or between 446 and 447 of the CH3 domain of a parental antibody or antigen binding fragment thereof. In some embodiments, the peptide tag is inserted between amino acid residue 110 and 111 of the light chain, or between 119 and 120, or between 120 and 121, or between 135 and 136, or between 136 and 137, or between 138 and 139, or between 165 and 166 of the CH1 domain, or between 388 and 389 of the CH3 domain of a parental antibody or antigen binding fragment thereof.

In another aspect, the present invention provides a modified antibody or antigen binding fragment thereof comprising SEQ ID NO: 103, SEQ ID NO: 109, SEQ ID NO:113, SEQ ID NO:121, SEQ ID NO:122, SEQ ID NO:127, SEQ ID NO:129, SEQ ID NO:130, SEQ ID NO:131, and/or SEQ ID NO:141. In another aspect, the present invention provides a modified antibody or antigen binding fragment thereof comprising SEQ ID NO:26, SEQ ID NO:27, SEQ ID NO:32, SEQ ID NO:63, SEQ ID NO:94, SEQ ID NO:95, SEQ ID NO:96, SEQ ID NO:126, SEQ ID NO:127, SEQ ID NO:129, SEQ ID NO:130, SEQ ID NO:131, SEQ ID NO:132, SEQ ID NO:139, SEQ ID NO:149, SEQ ID NO:151, SEQ ID NO:152, SEQ ID NO:157, SEQ ID NO:158, SEQ ID NO:160, SEQ ID NO:168, SEQ ID NO:169, SEQ ID NO:178, SEQ ID NO:248, SEQ ID NO:250, SEQ ID NO:251, SEQ ID NO:256, SEQ ID NO:257, SEQ ID NO:259, SEQ ID NO:267, SEQ ID NO:268, SEQ ID NO:277, SEQ ID NO:348, SEQ ID NO:349, SEQ ID NO:356, SEQ ID NO:358, SEQ ID NO:359, SEQ ID NO:364, SEQ ID NO:365, SEQ ID NO:367, SEQ ID NO:373, SEQ ID NO:374, SEQ ID NO:380, SEQ ID NO:384, SEQ ID NO:386, SEQ ID NO:387, or SEQ ID NO:388. In some embodiments, the present invention provides a modified antibody or antigen binding fragment thereof comprising SEQ ID NO:32, SEQ ID NO:63, SEQ ID NO:127, SEQ ID NO:129, SEQ ID NO:132, SEQ ID NO:151, SEQ ID NO:152, SEQ ID NO:157, SEQ ID NO:158, SEQ ID NO:160, SEQ ID NO:169, SEQ ID NO:250, SEQ ID NO:251, SEQ ID NO:256, SEQ ID NO:257, SEQ ID NO:259, SEQ ID NO:268, SEQ ID NO:358, SEQ ID NO:359, SEQ ID NO:364, SEQ ID NO:365, SEQ ID NO:367, SEQ ID NO:374, or SEQ ID NO:384.

In one aspect, said peptide tag is one or more peptides selected from those described in Table 2. The antibody heavy chain and/or light chain (or antigen binding fragment thereof) may contain 1, 2, 3, 4, 5, 6, 7, 8, or more protein tags in its structural loops. In some embodiments, the antibodies or antigen binding fragments contain 2, 4, 6, 8, or more protein tags in its structural loops. In some embodiments, said 4′-phosphopantetheinyl transferase is Sfp, AcpS, T. maritima PPTase, human PPTase, or a mutant form thereof that retains the 4′-phosphopantetheinyl transferase activity. In some embodiments, said 4′-phosphopantetheinyl transferase originates from Homo sapiens, Bacillus subtilis, Escherichia coli, Thermotoga maritima, Clostridium thermocellum, as well as any other mammalian, bacterial or fungal genome. In a specific embodiment, said 4′-phosphopantetheinyl transferase is Sfp and the peptide tag is selected from GDSLSWLLRLLN (SEQ ID NO:1), GDSLSWL (SEQ ID NO:2), DSLEFIASKLA (SEQ ID NO:9), GDSLDMLEWSLM (SEQ ID NO:10), DSLEFIASKL (SEQ ID NO:18), and DSLEFIASK (SEQ ID NO:19). In some embodiments, the parental antibody is an IgG, IgM, IgE, or IgA antibody. In a specific embodiment, the parental antibody is an IgG1 antibody. In some embodiments, the parental antibody is an IgG2, IgG3, or IgG4 antibody.

In another aspect, the present invention provides modified antibodies or antigen binding fragments thereof comprising a peptide tag that is a substrate of a 4′-phosphopantetheinyl transferase, and wherein said peptide tag is grafted into a structural loop, or C- or N-terminus of the antibody or antigen binding fragment thereof. In some embodiments, said peptide tag is grafted at amino acid positions from 62 to 64 of the V_H domain (mutations at amino acids 62 and 63, and insertion of the rest of the peptide tag between amino acids 63 and 64), at amino acid positions from 62 to 65 of the V_H domain (mutations at amino acids 62-64, and insertion of the rest of the peptide tag between amino acids 64 and 65); at amino acid positions from 133 to 139 of the CH1 domain (mutations of amino acids 133-138, and insertion of the rest of the peptide tag between amino acids 138-139), amino acid positions from 189 to 195 of the CH1 domain, and/or amino acid positions from 190 to 198 of the CH1 domain (mutations from amino acids 190-197, and insertion of the rest of the peptide tag between 197 and 198) of a parental antibody or antigen binding fragment thereof. In one embodiment, said peptide tag is one or more peptides selected from those described in Table 2. The modified antibody heavy chain and/or light chain (or antigen binding fragment thereof) may contain 1, 2, 3, 4, 5, 6, 7, 8, or more protein tags in its structural loops. In one embodiment, the modified antibodies or antigen binding fragments contain 2, 4, 6, 8, or more protein tags in its structural loops. In another embodiment, said 4′-phosphopantetheinyl transferase is Sfp, AcpS, T. maritima PPTase, human PPTase, or a mutant form thereof that retains the 4′-phosphopantetheinyl transferase activity. In one embodiment, said 4′-phosphopantetheinyl transferase originates from Homo sapiens, Bacillus subtilis, Escherichia coli, Thermotoga maritima, Clostridium thermocellum, as well as any other mammalian, bacterial or fungal genome. In some embodiments, said 4′-phosphopantetheinyl transferase is Sfp and the peptide tag is selected from GDSLSWLLRLLN (SEQ ID NO:1), GDSLSWL (SEQ ID NO:2), DSLEFIASKLA (SEQ ID NO:9), GDSLDMLEWSLM (SEQ ID NO:10), DSLEFIASKL (SEQ ID NO:18), and DSLEFIASK (SEQ ID NO:19). In one embodiment, the parental antibody is an IgG, IgM, IgE, or IgA antibody. In a specific embodiment, the parental antibody is an IgG1 antibody. In some embodiments, the parental antibody is an IgG2, IgG3, or IgG4 antibody.

In certain aspects, the modified antibodies provided herein are engineered to contain one or more orthogonal conjugation sites. Such orthogonal conjugation sites include, but are not limited to, a substrate of Sfp 4′-phosphopantetheinyl transferase, a substrate of AcpS 4′-phosphopantetheinyl transferase, T. maritima 4′-phosphopantetheinyl transferase, human 4′-phosphopantetheinyl transferase, a lysine, a cysteine, a tyrosine, a histidine, an unnatural amino acid, pyrrolysine and pyrroline-carboxy-lysine. The orthogonal conjugation sites may also be peptide sequences that can be enzymatically or chemically modified, e.g., a tetracysteine tag, a LPXTG-sortase peptide (X is any amino acid), a biotin acceptor peptide, a CXPXR-aldehyde tag (X is any amino acid), or a His tag. In certain embodiments, such engineered antibodies are labeled using the methods of the invention in combination with other conjugation methods known in the art including, but not limited to, chemoselective conjugation through cysteine, lysine, histidine, tyrosine, formyl-glycine, pyrrolysine, pyrroline-carboxylysine and unnatural amino acids.

In certain aspects, the enzymes Sfp and AcpS are used for orthogonal site-specific labeling of the same or two different labels onto an antibody engineered to contain an S-series peptide (for example, S1, S2, S3, S4, S5, S6 and S7) and an A-series peptide (for example, A1, A-1, A-2, A-3, A-4 and A-6) located in the VH, VL, CH1, CH2, CH3, or C_L region of the antibody (see also Table 2).

In other aspects, the enzymes Sfp and AcpS are used for orthogonal site-specific labeling of two different labels onto an antibody engineered to contain an ybbR-series peptide (for example, ybbR11, ybbR12 and ybbR13) and an A-series peptide (for example, A1, A-1, A-2, A-3, A-4 and A-6) located in the CH1, CH2, CH3, or C_L region of the antibody.

In other aspects, the enzymes Sfp or AcpS are used for orthogonal site-specific labeling onto an antibody engineered to contain an ybbR-series peptide (for example, ybbR11, ybbR12 and ybbR13) and an A-series peptide (for example, A1, A-1, A-2, A-3, A-4 and A-6) located in the VH, VL, CH1, CH2, CH3, or C_L region of the antibody in combination with other conjugation methods. Such methods include but are not limited to conjugation to lysine, cysteine, tyrosine, histidine, formyl glycine, unnatural amino acids, pyrrolysine and/or pyrroline-carboxy-lysine. Such methods can be used to attached the same or different labels than used for the enzymatic conjugation through Sfp or AcpS.

Proteins Having 4′-Phosphopantetheinyl Transferase Activity and Peptide Substrates

As used herein, the terms “4′-phosphopantetheinyl transferase” (PPTases) and “protein having 4′-phosphopantetheinyl transferase activity” are used interchangeably and refer to any protein or a fragment thereof, which is capable of transferring a ppan group from a donor molecule, such as coenzyme A (CoA) or an analog thereof, to a substrate, such as a peptide tag or an acyl carrier protein.

PPTases are enzymes which catalyze post-translational modification of carrier proteins associated with fatty acid synthases (FASs), polyketide synthases (PKSs) and nonribosomal peptide synthetases (NRPSs). These carrier proteins are commonly referred to as ACP, acyl carrier proteins (FASs and PKSs) or to as PCP, peptidyl carrier proteins (NRPSs). ACPs and PCPs consist of about 80 amino acids and are usually integrated as domains in FAS, PKS, or NRPS multienzyme complexes. In some instances, ACPs and PCPs are also found as free-standing autonomously folded proteins. The ACP is essential for fatty acid and polyketide biosynthesis, because it carries the corresponding metabolic intermediates via covalent attachment to its flexible ppan prosthetic group. The PCP carries out the analogous function in nonribosomal peptide synthesis by transporting peptide intermediates between active sites in NRPS multienzyme complexes. PPTases have been classified into three groups, based on sequence and structural similarity and substrate specificity. Members of the first group of PPTases, for example, AcpS of Escherichia coli, are about 120 amino acid residues long, function as homotrimers, and have fairly narrow substrate specificities limited to, for example, to the acetyl carrier proteins (ACPs) of type II FAS and PKS systems. Members of the second group, exemplified by Sfp of Bacillus subtilis or the human PPTase, function as monomers, and have been reported to have broad substrate specificities that include carrier proteins associated with NRPs, FASs and PKSs. (see, e.g., Suo et al., Proc. Natl. Acad. Sci. USA3 98:99-104, 2001; Quadri et al., Biochem., 37:1585-95, 1998; Liu et al., Arch. Microbiol, 183:37-44, 2005; Joshi et al., J. Biol. Chem., 278:33142-33149, 2003). The third group includes PPTases that are attached covalently to the type I FASs, such as those associated with the yeast cytosolic FAS. (see, e.g., Fichtlscherer et al., Eur. J. Biochem., 267:2666-71, 2000).

According to the present invention, PPTases include naturally occurring proteins having 4′-phosphopantetheinyl transferase activity, including but not limited to, AcpS from E. coli (type I PPTase) and Sfp from B. subtilis (type II PPTase), integrated PPTase domains (type III PPTase) associated with fatty acid synthases (FAS) from S. cerevisiae, S. pombe, C. albacans, E. nidulans, and P. patulum, EntD from E. coli, S. flexneri, S. typhimurium and S. austin, Psf-1 from B. pumilus, Gsp from B. brevis, Hetl from Anabaena sp., Lys5 from S. cerevisiae, Lpa-14 from B. subtilis and 0195 from E. coli, PPTase (NP_228501) of T. maritima MSB8, PPTase (NP_056238) of Homo sapiens, and homologs and mutants thereof. PPTases of the present invention also include proteins having 4′-phosphopantetheinyl transferase activity from species other than the ones described above, as well as those artificially or recombinantly produced proteins, which are capable of 4′-phospopantetheinylating a peptide moiety described herein. Sfp and AcpS represent two classes of 4′-phosphopantetheinyl transferases that show differences both in their substrate specificity for the carrier protein domains and in their structures (Flugal et al., J. Biol. Chem., 275:959-968, 2000; Lambalot et al., Chem. Biol., 3:923-936, 1996). The Sfp class of pseudodimeric PPTases are about 230 residues in size and the crystal structure of Sfp suggests it has a twofold symmetry with the N- and the C-terminal halves of the molecule adopting similar folds, with the active site of the enzyme at the interface (Hodneland et al., Proc. Natl. Acad. Sci. USA, 99:5048-5052, 2002; Koglin et al., Science, 312:273-276, 2006). In contrast, AcpS is about 120 residues in length, about half the size of Sfp, and the crystal structures of AcpS show that the enzyme assembles into trimers and the ACP and CoA binding sites are formed at the interface between each monomer (Reuter et al., Embo. J., 18:6823-6831, 1999; Chirgadze et al., Embo. J., 19:5281-5287, 2000). It has been reported that Sfp exhibits a much broader substrate specificity than AcpS in that Sfp can modify both PCP and ACP domains from nonribosomal peptides synthetases, polyketide synthases, and fatty acid synthases, while AcpS modifies only ACP (Flugel et al., J. Biol. Chem., 275:959-968, 2000; Parris et al., Structure, 8:883-895, 2000; Mofid et al., J. Biol. Chem., 277:17023-17031, 2002).

ACP and PCP substrates of both kinds of PPTases adopt similar folds as four-helix bundle proteins with the serine residue to be modified by the ppan prosthetic group at the top of the second alpha-helix, which has been shown to play an important role for interacting with Sfp and AcpS (Hodneland et al., Proc. Natl. Acad. Sci. USA, 99:5048-5052, 2002; Chirgadze et al., Embo. J., 19:5281-5287, 2000; Quadri et al., Biochem., 37:1585-1595, 1998; Li et al., Biochem., 42:4648-4657, 2003). Although there is not an obvious consensus sequence difference between PCPs and ACPs, the most significant difference between the two is the electrostatic surface potential of the carrier proteins, with a neutral protein surface for PCPs and a negatively charged acidic surface for ACP domains in FAS and PKS systems (Parris et al., Structure, 8:883-895, 2000).

Groups of short peptides have been identified as efficient substrates for PPTases. For example, ybbR13 is an 11 amino acid residue peptide, which is a substrate of Sfp (J. Yin et al., Proc. Natl. Acad. Sci. USA, 102:15815-15820, 2005; Z. Zhou et al., ACS Chem Biol., 2:337-346, 2007; Z. Zhou et al., J. Am. Chem. Soc., 130: 9925-9930, 2008). The ybbR13 peptide (DSLEFIASKLA) was isolated from a phage displayed library of the B. subtilis genome (J. Yin et al., Proc. Natl. Acad. Sci. USA, 102:15815-15820, 2005). A part of the sequence of the ybbR13 peptide is derived from a B. subtilis open reading frame, called ybbR, and it includes the (H/D)S(L/I) tri-peptide sequence at the N-terminus, which is conserved in known substrates of PPTases such as ACPs, PCPs, and aryl carrier proteins (ArCPs). The ybbR peptide does not include the amino acid sequence, DxFFxxLGG at its N-terminus, which is found to be conserved in PCPs. Modifications and variants of the ybbR13 peptide have been described which can be used as substrates in 4′-phosphopantetheinylation reactions for site specific labeling (J. Yin et al., Proc. Natl. Acad. Sci. USA, 102:15815-15820, 2005). Additional peptide substrates for PPTases are the S series of peptides and the A series of peptides, designated as “S” or “A” based on their reactivity with Sfp or AcpS, respectively (Z. Zhou et al. ACS Chem Biol., 2:337-346, 2007 and Z. Zhou et al. J. Am. Chem. Soc., 130:9925-9930, 2008). Exemplary S series of peptides include, but are not limited to, S6, which is an efficient substrate for Sfp, and exemplary A series of peptides include, but are not limited to, A1, which is an efficient substrate for AcpS. Both S6 and A1 peptides are 12 amino acid residues in length.

Examples of peptide substrates are listed in Table 2 below. According to the present invention, these short peptide tags can be used for the site-specific labeling of target proteins (including antibodies) in reactions catalyzed by PPTases. Additionally, a pairing of peptide tags and respective PPTases described herein, e.g., ybbR13/Sfp or S6/Sfp and A1/AcpS, can also be used for orthogonal site-specific labeling of one (or multiple) target proteins, e.g., in cell lysates or on the surface of live cells.

TABLE 2
PPTase peptide substrate examples. The
modified serine residue is underlined.
		SEQ
		ID
	Sequence	NO:	Name
	GDSLSWLLRLLN	1	S6
	GDSLSWL	2	S6 truncate
	GDSLSWLVRCLN	3	S1
	GDSLSWLLRCLN	4	S2
	GDSLSWLVRLLN	5	S3
	GDSLSWLLRSLN	6	S7
	GSQDVLDSLEFIASKLA	7	Ybbr11
	VLDSLEFIASKLA	8	Ybbr12
	DSLEFIASKLA	9	Ybbr13
	GDSLDMLEWSLM	10	A1
	GDSLDMLEWSL	11	A-1
	GDSLDMLEWS	12	A-2
	GDSLDMLEW	13	A-3
	DSLDMLEW	14	A-4
	GDSLDM	15	A-6
	LDSVRMMALAAR	16	E0
	LDSLDMLEWSLR	17	E2
	DSLEFIASKL	18	ybbR truncate 1
	DSLEFIASK	19	ybbR truncate 2
	DVLDSLEFI	20	ybbR8
	VLDSLEFIAS	21	ybbR14

Accordingly, the present invention provides engineered antibodies which contain one or more of the peptide tags listed in Table 2, and methods of labeling such antibodies, e.g., conjugating with a cytotoxin. The labeling chemistry is illustrated below and in the Examples.

2. Labeling Chemistry

The modified antibody or antigen binding fragment thereof provided herein are site-specifically labeled by post-translational modification of the short peptide tag (inserted or grafted or combination thereof) using PPTases or mutants thereof, including, but not limited to, Sfp, AcpS, human PPTase or T. maritima PPTase. Such post-translational modifications involve a PPTase catalyzed reaction between a conserved serine residue in the short peptide tag and a 4′-phosphopantetheinyl (ppan) group of coenzyme A (CoA) or a coenzyme A analogue. In this reaction, the ppan prosthetic group of CoA, or modified ppan prosthetic group of the CoA analogue, is attached to the short peptide tag through the formation of a phosphodiester bond with the hydroxyl group of the conserved serine residue of the short peptide tag which has been incorporated (i.e. inserted or grafted or combination thereof) into the antibody. The ppan or modified ppan is linked to a terminal group (TG) and the formation of the phosphodiester bond thereby conjugates the terminal group (TG) to the modified antibody or antigen binding fragment thereof via a linker which includes the ppan or modified ppan moiety.

In certain embodiments the modified antibodies or antigen binding fragment thereof provided herein are labeled by a one-step method wherein the post-translational modification occurs by reacting a CoA linked to a terminal group (TG), or a CoA analogue linked to a terminal group (TG), with the conserved serine of the short peptide tag engineered into the antibody, as shown in Schemes (Ia)-(Ic) below. Alternatively, in other embodiments of the post-translational modification of the modified antibodies or antigen binding fragment thereof provided herein, the modified antibodies or antigen binding fragment thereof are labeled by a two-step method wherein the post-translational modification involves first reacting an activated CoA or an activated CoA analogue with the conserved serine of the short peptide tag engineered into the antibody, followed by reacting a functionalized terminal group (TG) with the reactive group on the activated CoA or an activated CoA. Such two-step methods are illustrated in Schemes (IIa)-(IIf) below. In other embodiments of the post-translational modification of the modified antibodies or antigen binding fragment thereof provided herein, the modified antibodies or antigen binding fragment thereof are labeled by a three-step method, whereinthe post-translational modification involves first reacting a CoA having a protected ppan prosthetic group, or a CoA analogue having protected ppan prosthetic group, with the conserved serine of the short peptide tag engineered into the antibody, thereby attaching the CoA or CoA analogue to the antibody. In the second step the protected ppan prosthetic group is deprotected thereby generating a reactive functional group on the protected ppan prosthetic group. In the third step, this reactive functional group is linked to a terminal group (TG), thereby attaching the terminal group to the modified antibody or antigen binding fragment thereof. Such three-step methods are illustrated in Schemes (IIIa)-(IIIf) below

One-Step Method

The One-step method used to label the modified antibodies or antigen binding fragment thereof provided herein is shown in Scheme (Ia):

• • where:
• R₂ is H or —P(═O)(OH)₂;
• Linker Unit (LU) is a chemical moiety that links the terminal group (TG) to the modified ppan prosthetic group of the CoA analogue and
• terminal group (TG) is a drug moiety selected from an anti-cancer agent, an anti-inflammatory agent, an antifungal agent, an antibacterial agent, an anti-parasitic agent, an anti-viral agent, and an anesthetic agent, a biophysical probe, a fluorophore, an affinity probe, a chelator, a spectroscopic probe, a radioactive probe, a lipid molecule, a polyethylene glycol, a polymer, a spin label, DNA, RNA, a protein, a peptide, an antibody, an antibody fragment, a nanoparticle, a quantum dot, a liposome, a PLGA particle, a polysaccharide, or a surface.
• In certain embodiments the Linker Unit (LU) comprises a linker selected from a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker, a photo-cleavable linker or any combination thereof, and the Linker Unit (LU) optionally contains a self-immolative spacer.
• In certain embodiments the Linker Unit (LU) is -L₁-L₂-L₃-L₄-, wherein
• L₁ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker;
• L₂ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker;
• L₃ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker, and
• L₄ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker, a photo-cleavable linker or a self-immolative spacer.
• In certain embodiments the Linker Unit (LU) is -L₁-L₂-L₃-L₄-, wherein
• L₁ is a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker;
• L₂ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker;
• L₃ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker, and
• L₄ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker, a photo-cleavable linker or a self-immolative spacer.
• In certain embodiments the Linker Unit (LU) is -L₁-L₂-L₃-L₄-, wherein
• L₁ is a bond, -A₁-, -A₁X²— or —X²—; where:
  • A₁ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, or —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;
  • each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• • each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
  • each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
  • each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
  • R⁷ is independently selected from H, phenyl and pyridine;
  • R⁸ is independently selected from

• • R⁹ is independently selected from H and C_1-6haloalkyl;
  • each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
  • each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9;
• L₂ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker;
• L₃ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker, and
• L₄ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker, a photo-cleavable linker or a self-immolative spacer.
• In certain embodiments, L₁ is C(═O)—CH₂CH₂—NH—C(═O)—CH₂CH₂—S—, so LU is —C(═O)—CH₂CH₂—NH—C(═O)—CH₂CH₂—S-L₂-L₃-L₄-.
• In certain embodiments the Linker Unit (LU) is -L₁-L₂-L₃-L₄-, wherein
• L₁ is a bond, -A₁-, -A₁X²— or —X²—; where:
  • A₁ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(CH₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —S(CH₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)(CH₂)_n—, —(CH₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
  • each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• • each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
  • each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
  • each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
  • R⁷ is independently selected from H, phenyl and pyridine;
  • R⁸ is independently selected from

• • R⁹ is independently selected from H and C_1-6haloalkyl;
  • each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
  • each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9;
• L₂ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker;
• L₃ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker;
• L₄ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker, a photo-cleavable linker or a self-immolative spacer.
• In certain embodiments the Linker Unit (LU) is -L₁-L₂-L₃-L₄-, wherein
• L₁ is a bond, -A₁-, -A₁X²— or —X²—; where:
  • A₁ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
  • each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• • each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
  • each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
  • each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
  • R⁷ is independently selected from H, phenyl and pyridine;
  • R⁸ is independently selected from

• • R⁹ is independently selected from H and C_1-6haloalkyl;
  • each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
  • each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9;
• L₂ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker;
• L₃ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker or a photo-cleavable linker, and
• L₄ is a bond, a non-enzymatically cleavable linker, a non-cleavable linker, an enzymatically cleavable linker, a photo stable linker, a photo-cleavable linker or a self-immolative spacer.
• In certain embodiments the Linker Unit (LU) is -L₁-L₂-L₃-L₄-, wherein
• L₁ is a bond, -A₁-, -A₁X²— or —X²—; where:
  • A₁ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—; each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• • each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
  • each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
  • each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
  • R⁷ is independently selected from H, phenyl and pyridine;
  • R⁸ is independently selected from

• • R⁹ is independently selected from H and C_1-6haloalkyl;
  • each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
  • each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9;
• L₂ is a bond, a non-enzymatically cleavable linker or a non-cleavable linker;
• L₃ is a bond, a non-enzymatically cleavable linker or a non-cleavable linker;
• L₄ is a bond, an enzymatically cleavable linker or a self-immolative spacer.
• In certain embodiments the Linker Unit (LU) is -L₁-L₂-L₃-L₄-, wherein
• L₁ is a bond, -A₁-, -A₁X²— or —X²—;
• L₂ is a bond, -A₂-, or -A₂X²—;
• L₃ is a bond, -A₃-, or -A₃X²—;
• L₄ is a bond, -A₄-, -A₄X²—,

• A₁ is —C(═O)NH—, —NHC(═O)—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, or —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;
• A₂ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NR⁴—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nS—, —(C(R⁴)₂)_nS—, —S(CH₂)_n—, —S(C(R⁴)₂)_n—, —(CH₂)_nNH—, —(C(R⁴)₂)_nNH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, (C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)NH(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)NH(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—,

• A₃ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nS—, —(C(R⁴)₂)_nS—, —S(CH₂)_n—, —S(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)NH(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)NH(C(R⁴)₂)_n—, —(CH₂)_n(O(CH₂)_n)_mOC(═O)—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mOC(═O)—, —(CH₂)_n(O(CH₂)_n)_mC(═O)—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mC(═O)—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—,

• A₄ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_n—, —(O(CH₂)_n)_m—, —(O(C(R⁴)₂)_n)_m—, —((CH₂)_nO)_m—, —(((C(R⁴)₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(((C(R⁴)₂)_nO)_mC(R⁴)₂)_n—, —(CH₂)_nC(═O)NH—, —(C(R⁴)₂)_nC(═O)NH—, —(CH₂)_nNHC(═O)—, —(C(R⁴)₂)_nNHC(═O)—, —NHC(═O)(CH₂)_n—, —NHC(═O)(C(R⁴)₂)_n—, —C(═O)NH(CH₂)_nS—, —C(═O)NH(C(R⁴)₂)_nS—, —S(CH₂)_nC(═O)NH—, —S(C(R⁴)₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)NH(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —C(═O)(CH₂)_n—, —C(═O)(C(R⁴)₂)_n—, —(CH₂)_nC(═O)—, —(C(R⁴)₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_n(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(C(R⁴)₂)_nNHC(═O)(C(R⁴)₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(C(R⁴)₂)_nNH((C(R⁴)₂)_nO)_m(C(R⁴)₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, or —(O(C(R⁴)₂)_n)_mNHC(═O)(C(R⁴)₂)_n—;
• each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
• each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
• each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
• R⁷ is independently selected from H, phenyl and pyridine;
• R⁸ is independently selected from

• R⁹ is independently selected from H and C_1-6haloalkyl;
• each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
• each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9.
• In certain embodiments the Linker Unit (LU) is -L₁-L₂-L₃-L₄-, wherein
• L₁ is a bond, -A₁-, -A₁X²— or —X²—;
• L₂ is a bond, -A₂-, or -A₂X²—;
• L₃ is a bond, -A₃-, or -A₃X²—;
• L₄ is a bond, -A₄-, -A₄X²—,

• A₁ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —(O(CH₂)_n)_m, —((CH₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(CH₂)_nC(═O)NH—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nS—, —S(CH₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)(CH₂)_n—, —(CH₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
• A₂ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —(O(CH₂)_n)_m, —((CH₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(CH₂)_nC(═O)NH—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nS—, —S(CH₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)(CH₂)_n—, —(CH₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n— or

• A₃ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(CH₂)_nC(═O)NH—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nS—, —S(CH₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)(CH₂)_n—, —(CH₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n— or

• A₄-C(═O)NH—, —C(═O)NH(CH₂)_n—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m—, —((CH₂)_nO)_m(CH₂)_n—, —(CH₂)_nC(═O)NH—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nS—, —S(CH₂)_nC(═O)NH—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —C(═O)(CH₂)_n—, —(CH₂)_nC(═O)—, —(CH₂)_n(O(CH₂)_n)_mNHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
• each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
• each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
• each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
• each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9.
• In certain embodiments the Linker Unit (LU) is -L₁-L₂-L₃-L₄-, wherein
• L₁ is a bond, -A₁-, -A₁X²— or —X²—;
• L₂ is a bond, -A₂-, or -A₂X²—;
• L₃ is a bond, -A₃-, or -A₃X²—;
• L₄ is a bond, -A₄-, -A₄X²—, H

• A₁ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—;
• A₂ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n— or

• A₃ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m—, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n—, —(O(CH₂)_n)_mNHC(═O)(CH₂)_n— or

• A₄ is —C(═O)NH—, —C(═O)NH(CH₂)_n—, —C(═O)NH(CH₂)_nS—, —(O(CH₂)_n)_m, —((CH₂)_nO)_m(CH₂)_n—, —NHC(═O)(CH₂)_n—, —(CH₂)_nNHC(═O)—, —C(═O)NH(CH₂)_nNHC(═O)(CH₂)_n—, —(CH₂)_nNH((CH₂)_nO)_m(CH₂)_n— or —(O(CH₂)_n)_mNHC(═O)(CH₂)_n—; each X² is independently selected from a bond,

—S—, —Si(OH)₂O—,

—CHR⁴(CH₂)_nC(═O)NH—, —CHR⁴(CH₂)_nNHC(═O)—, —C(═O)NH— and —NHC(═O)—;

• each R⁴ is independently selected from H, C_1-4alkyl, —C(═O)OH and —OH,
• each R⁵ is independently selected from H, C_1-4alkyl, phenyl or C_1-4alkyl substituted with 1 to 3 —OH groups;
• each R⁶ is independently selected from H, fluoro, benzyloxy substituted with —C(═O)OH, benzyl substituted with —C(═O)OH, C_1-4alkoxy substituted with —C(═O)OH and C_1-4alkyl substituted with —C(═O)OH;
• R⁷ is independently selected from H, phenyl and pyridine;
• R⁸ is independently selected from

• R⁹ is independently selected from H and C_1-6haloalkyl;
• each n is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9, and
• each m is independently selected from 1, 2, 3, 4, 5, 6, 7, 8 and 9.

In certain embodiments of any of the compounds or methods described herein, L₁ is —C(═O)—NH—CH₂—CH₂—S-[L₂-L₃-L₄-TG]. (Portions of these formulas depicted in brackets such as [L₂-L₃-L₄-TG] are added to the formula being described in order to identify which open valence of the formula is attached to the bracket-enclosed part of the remainder of the structure.)

In certain embodiments of any of the compounds or methods described herein, L₂ is selected from:

In certain embodiments of any of the compounds or methods described herein, L₃ is selected from —(CH₂)_2-6—C(═O)—[L₄-TG]; —(CH₂)_2-6—NH-[L₄-TG]; —(CH₂)_2-6—S-[L₄-TG]; —(CH₂)_2-6—Z-[L₄-TG]; and —(CH₂)_2-6—Z—C(═O)—[L₄-TG], where Z is O, NH or S.

In certain embodiments of any of the compounds or methods described herein, L₄ is a bond or a val-cit linker of this formula:

When L₄ is a val-cit linker, L₃ is preferably —(CH₂)_2-6—C(═O)—.

In certain embodiments of any of the compounds or methods described herein, TG is a maytansinoid such as DM1 or DM4, or a dolostatin 10 compound, e.g. auristatins MMAF or MMAE, or a calicheamicin such as N-acetyl-γ-calicheamicin, or a label or dye such as rhodamine or tetramethylrhodamine.

As used herein, a “linker” is any chemical moiety that is capable of linking an antibody or a fragment thereof to a terminal group. Linkers can be susceptible to cleavage, such as, acid-induced cleavage, light-induced cleavage, peptidase-induced cleavage, esterase-induced cleavage, and disulfide bond cleavage, at conditions under which the compound or the antibody remains active. Alternatively, linkers can be substantially resistant to cleavage. A linker may or may not include a self-immolative spacer.

Non-limiting examples of the non-enzymatically cleavable linkers as used herein to conjugate a terminal group (TG) to the modified antibodies or antigen binding fragment thereof provided herein include, acid-labile linkers, linkers containing a disulfide moiety, linkers containing a triazole moiety, linkers containing a hydrazine moiety, linkers containing a thioether moiety, linkers containing a diazo moiety, linkers containing an oxime moiety, linkers containing an amide moiety and linkers containing an acetamide moiety.

Non-limiting examples of the enzymatically cleavable linkers as used herein to conjugate a terminal group (TG) to the modified antibodies or antigen binding fragment thereof provided herein include, but are not limited to, linkers which are cleaved by a protease, linkers which are cleaved by an amidase, and linkers which are cleaved by 3-glucuronidase.

In certain embodiments, such enzyme cleavable linkers are linkers which are cleaved by cathepsin, including cathepsin Z, cathepsin B, cathepsin H and cathepsin C. In certain embodiments the enzymatically cleavable linker is a dipeptide cleaved by cathepsin, including dipeptides cleaved by cathepsin Z, cathepsin B, cathepsin H or cathepsin C. In certain embodiments the enzymatically cleavable linker is a cathepsin B-cleavable peptide linker. In certain embodiments the enzymatically cleavable linker is a cathepsin B-cleavable dipeptide linker. In certain embodiments the enzymatically cleavable linker is a cathepsin B-cleavable dipeptide linker is valine-citrulline or phenylalanine-lysine. Other non-limiting examples of the enzymatically cleavable linkers as used herein conjugate a terminal group (TG) to the modified antibodies or antigen binding fragment thereof provided herein include, but are not limited to, linkers which are cleaved by β-glucuronidase, e.g.,

See Ducry et al, Bioconjugate Chem, vol. 21(1), 5-13 (2010).

“Self-immolative spacers” are bifunctional chemical moieties covalently linked at one termini to a first chemical moiety and at the other termini to a second chemical moiety, thereby forming a stable tripartate molecule. Upon cleavage of a bond between the self-immolative spacer and the first chemical moiety, self-immolative spacers undergoing rapid and spontaneous intramolecular reactions and thereby separate from the second chemical moiety. These intramolecular reactions generally involve electronic rearrangements such as 1,4, or 1,6, or 1,8 elimination reactions or cyclizations to form highly favored five- or six-membered rings. In certain embodiments of the present invention, the first moiety is an enzyme cleavable linker and this cleavage results from an enzymatic reaction, while in other embodiments the first moiety is an acid labile linker and this cleavage occurs due to a change in pH. As applied to the present invention, the second moiety is the “Label” group as defined herein. In certain embodiments, cleavage of the first moiety from the self-immolative spacer results from cleavage by a proteolytic enzyme, while in other embodiments it results from cleaved by a hydrolase. In certain embodiments, cleavage of the first moiety from the self-immolative spacer results from cleavage by a cathepsin enzyme.

In certain embodiments, the enzyme cleavable linker is a peptide linker and the self-immolative spacer is covalently linked at one of its ends to the peptide linker and covalently linked at its other end to a drug moiety. This tripartite molecule is stable and pharmacologically inactive in the absence of an enzyme, but which is enzymatically cleavable by enzyme at the bond covalently linking the spacer moiety and the peptide moiety. The peptide moiety is cleaved from the tripartate molecule which initiates the self-immolating character of the spacer moiety, resulting in spontaneous cleavage of the bond covalently linking the spacer moiety to the drug moiety, to thereby effect release of the drug in pharmacologically active form.

Non-limiting examples of the self-immolative spacer optionally used in the conjugation of a terminal group (TG) to the modified antibodies or antigen binding fragment thereof provided herein include, but are not limited to, moieties which include a benzyl carbonyl moiety, a benzyl ether moiety, a 4-aminobutyrate moiety, a hemithioaminal moiety or a N-acylhemithioaminal moiety.

Other examples of self-immolative spacers include, but are not limited to, p-aminobenzyloxycarbonyl groups, aromatic compounds that are electronically similar to the p-aminobenzyloxycarbonyl group, such as 2-aminoimidazol-5-methanol derivatives and ortho or para-aminobenzylacetals. In certain embodiments, self-immolative spacers used herein which undergo cyclization upon amide bond hydrolysis, include substituted and unsubstituted 4-aminobutyric acid amides and 2-aminophenylpropionic acid amides.

In certain embodiments, the self-immolative spacer is

while in other embodiments the self-immolative spacer is

where n is 1 or 2. In other embodiments the self-immolative spacer is

where n is 1 or 2. In other embodiments the self-immolative spacer is

where n is 1 or 2. In other embodiments the self-immolative spacer is

where n is 1 or 2. In other embodiments the self-immolative spacer is

where n is 1 or 2.

Scheme (Ib) illustrates the post-translational modification of the modified antibodies or antigen binding fragment thereof provided herein wherein the Linker Unit (LU) is -L₁-L₂-L₃-L₄-.

where R₂, L₁, L₂, L₃, L₄ and TG are as defined herein.

The CoA analogues of Scheme (Ia) and Scheme (Ib) may be obtained by total chemical synthesis, however the CoA analogues of Scheme (Ia) and Scheme (Ib) are preferably obtained by a chemoenzymatic process wherein pantetheine analogues are chemically synthesized and then biosynthetically converted into the corresponding CoA analogue (see Kristine M. Clarke et al., “In Vivo Reporter Labeling of Proteins via Metabolic Delivery of Coenzyme A Analogues”, J. Am. Chem. Soc., 2005, 127, p. 11234-11235 and Jordan L. Meier et al., “Synthesis and Evaluation of Bioorthogonal Pantetheine Analogues for in Vivo Protein Modification”, J. Am. Chem. Soc., 2006, 128, p. 12174-12184). The biosynthetic conversion for CoA analogues of Scheme (Ia) is shown below:

while the biosynthetic conversion for CoA analogues of Scheme (Ib) is shown below:

where LU, L₁, L₂, L₃, L₄ and TG are as defined herein.

In certain embodiments the biosynthetic conversion occurs “in-vivo”, wherein the pantetheine analogue enters a cell from the surrounding media whereby once inside the cell it is converted by the CoA enzymatic pathway into the corresponding CoA analogue. In a specific embodiment, E. coli is used for the biosynthetic conversion of pantetheine analogues into the corresponding CoA analogues, wherein the pantetheine analogue enters E. coli from the surrounding media and once inside the cell the pantetheine analogue is initially phosphorylated by the pantothenate kinase (PanK or CoaA) using adenosine-5′-triphosphate (ATP), then adenylated by the phosphopantetheine adenylyltransferase (PPAT or CoaD) to give the dephospho-CoA analogue and then further phosphorylated by the dephosphocoenzyme A kinase (DPCK or CoaE) to yield the CoA analogue.

In other embodiments the biosynthetic conversion occurs “in-vitro”, wherein the enzymatic CoA pathway is reconstituted with the pantetheine analogue, whereby it is converted “in-vitro” by the reconstituted CoA enzymatic pathway into the corresponding CoA analogue. In a specific embodiment of “in-vitro” conversion, the reconstituted CoA enzymatic pathway is the E. coli CoA enzymatic pathway, wherein the pantetheine analogue is initially phosphorylated by CoaA and ATP, then adenylated by CoaD to give the dephospho-CoA analogue and then further phosphorylated by CoaE to yield the CoA analogue.

In certain embodiments the Linker Unit (LU) is —C(═O)NH(CH₂)₂S-L₂-L₃-L₄- and R₂ is —P(═O)(OH)₂, and in such an embodiment the terminal group is linked to CoA. Scheme (Ic) illustrates the post-translational modification of the modified antibodies or antigen binding fragment thereof provided herein for the specific embodiment wherein the PPTase catalyzes the reaction between the conserved serine residue in the incorporated short peptide tag and a terminal group (TG) linked to coenzyme A (CoA):

where L₂, L₃, L₄ and TG are as defined herein

In certain embodiments, the modified antibodies or antigen binding fragment thereof provided herein are site-specifically labeled by a one-step method as shown in Scheme (Ia), Scheme (Ib) and Scheme (Ic), wherein a terminal group linked to CoA or a CoA analogue reacts with the conserved serine of the short peptide tag engineered into the antibody.

The one step method includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a small peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity, and
  • (b) labeling the modified antibody or antigen binding fragment thereof with a terminal group by incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a compound having the structure of Formula (A):

• wherein:
• R₂, Linker Unit (LU) and TG are as described herein.

In such One-Step methods using a compound of Formula (A) the terminal group (TG) is thereby conjugated to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (I-a). The linker of Formula (I-a) is attached to the small peptide tag by a phosphodiester bond formed between the 4′-phosphopantetheinyl moiety and the hydroxyl group of the conserved serine residue of the short peptide tag engineered into the antibody:

where LU is as defined herein and the * denotes that the 4′-phosphopantetheinyl moiety is attached to the small peptide tag.

In certain embodiments, the one step method includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a small peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity, and
  • (b) labeling the modified antibody or antigen binding fragment thereof with a terminal group by incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a compound having the structure of Formula (B):

where R₂, L₁, L₂, L₃, L₄ and TG are as defined herein.

In such One-Step methods using a compound of Formula (B) described above the terminal group is thereby attached to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (I-b). The linker of Formula (I-b) is attached to the small peptide tag by a phosphodiester bond formed between the 4′-phosphopantetheinyl moiety and the hydroxyl group of the conserved serine residue of the short peptide tag engineered into the antibody:

where L₁, L₂, L₃ and L₄ are as defined herein and the * denotes that the 4′-phosphopantetheinyl moiety is attached to the small peptide tag.
In other embodiments, the one step method includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a small peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity, and
  • (b) labeling the modified antibody or antigen binding fragment thereof with a terminal group by incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a compound having the structure of Formula (C):

where L₂, L₃, L₄ and TG are as defined herein.

In such One-Step methods using a compound of Formula (C) described above the terminal group is thereby attached to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (I-c). The linker of Formula (I-c) is attached to the small peptide tag by a phosphodiester bond formed between the 4′-phosphopantetheinyl moiety and the hydroxyl group of the conserved serine residue of the short peptide tag engineered into the antibody:

where L₂, L₃ and L₄ are as defined herein and the * denotes that the 4′-phosphopantetheinyl moiety is attached to the small peptide tag.

In certain embodiments of the One-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted with a compound having the structure of Formula (A), Formula (B) or Formula (C) and a 4′-phosphopantetheinyl transferase enzyme that is co-expressed in the same cell as the expressed modified antibody or antigen binding fragment thereof. In certain embodiments of the One-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted in the cell culture media with a compound having the structure of Formula (A), Formula (B) or Formula (C) and 4′-phosphopantetheinyl transferase enzyme produced in the same or in another cell. In certain embodiments of the One-Step Methods described herein, the 4′-phosphopantetheinyl transferase enzyme is immobilized on solid support. In certain embodiments the solid support is optionally comprised of a polymer on a bead or a column.

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is -A₁X²—, L₂ is a bond, L₃ is a bond, L₄ is -A₄-, A₁ is —C(═O)NH(CH₂)_nS—, A₄ is —(CH₂)_nNHC(═O)—, and X² is

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is -A₁X²—, L₂ is a bond, L₃ is a bond, L₄ is -A₄-, A₁ is —C(═O)NH(CH₂)_nS—, A₄ is —(CH₂)_nNHC(═O)—; X² is

and TG is a fluorescent probe.

In certain embodiments of the compound of Formula (B) is

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is -A₁X²—, L₂ is a bond, L₃ is a bond, L₄ is -A₄-, A₁ is —C(═O)NH(CH₂)_nS—, A₄ is —(CH₂)_nC(═O)—, and X² is

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is -A₁X²—, L₂ is a bond, L₃ is a bond, L₄ is -A₄-, A₁ is —C(═O)NH(CH₂)_nS—, A₄ is —(CH₂)_nC(═O)—; X² is

and TG is a drug moiety.

In certain embodiments the compound of Formula (B) is

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is -A₁X²—, L₂ is -A₂-, L₃ is -A₃-, L₄ is

A₁ is —C(═O)NH(CH₂)_nS—, A₂ is —(CH₂)_nC(═O, A₃ is

and X² is

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is -A₁X²—, L₂ is -A₂-, L₃ is -A₃-, L₄ is

A₁ is —C(═O)NH(CH₂)_nS—, A₂ is —(CH₂)_nC(═O, A₃ is

X² is

and TG is a drug moiety.

In certain embodiments the compound of Formula (B) is

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is a -A₁X²—, L₂ is a bond-, L₃ is -A₃-, L₄ is a bond, A₁ is —C(═O)NH(CH₂)_nS—, A₃ is —(CH₂)_nC(═O)—, and X² is —(CH₂)_nC(═O)NH—.

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is a -A₁X²—, L₂ is a bond-, L₃ is -A₃-, L₄ is a bond, A₁ is —C(═O)NH(CH₂)_nS—, A₃ is —(CH₂)_nC(═O)—, X² is —(CH₂)_nC(═O)NH—, and TG is a drug moiety.

In certain embodiments the compound of Formula (B) is

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is a -A₁X²—, L₂ is a bond, L₃ is -A₃-, L₄ is a bond, A₁ is —C(═O)NH(CH₂)_nS, A₃ is —(CH₂)_nC(═O)—, X² is —CHR⁴(CH₂)_nC(═O)NH—, and R⁴ is —C(═O)OH.

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is a -A₁X²—, L₂ is a bond, L₃ is -A₃-, L₄ is a bond, A₁ is —C(═O)NH(CH₂)_nS, A₃ is —(CH₂)_nC(═O)—, X² is —CHR⁴(CH₂)_nC(═O)NH—, R⁴ is —C(═O)OH, and TG is a drug moiety.

In certain embodiments the compound of Formula (B) is

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is -A₁X²—, where A₁ is —C(═O)NH(CH₂)_nS— and X² is —(CH₂)_nC(═O)NH—; L₂ is a bond; L₃ is a bond, and L₄ is -A₄- wherein A₄ is —(CH₂)_nNHC(═O)—.

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is -A₁X²—, wherein A₁ is —C(═O)NH(CH₂)_nS— and X² is —(CH₂)_nC(═O)NH—; L₂ is a bond; L₃ is a bond; L₄ is -A₄-, wherein A₄ is —(CH₂)_nC(═O)—.

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is -A₁X²—, wherein A₁ is —C(═O)NH(CH₂)_nS— and X² is —(CH₂)_nC(═O)NH—; L₂ is -A₂-, wherein A₂ is —(CH₂)_nC(═O; L₃ is -A₃-, wherein A₃ is

and L₄ is

In certain embodiments of methods, compounds and immunoconjugates provided herein: L₁ is a -A₁X²—, wherein A₁ is —C(═O)NH(CH₂)_nS— and X² is —(CH₂)_nC(═O)NH—; L₂ is a bond-; L₃ is -A₃-, wherein A₃ is —(CH₂)_nC(═O)—, and L₄ is a bond.

Two-Step Method

Alternatively, the modified antibodies or antigen binding fragment thereof provided herein are site-specifically labeled by a two-step method, wherein, in the first step the ppan prosthetic group of CoA, or modified ppan prosthetic group of the CoA analogue, which contain a functional group (R₁), is attached to the short peptide tag by a phosphodiester bond formed between the 4′-phosphopantetheinyl moiety and the hydroxyl group of the conserved serine residue of the short peptide tag which has been incorporated into the antibody. In the second step a terminal group (TG) linked, or directly attached to, a group which is reactive with the functional group (R₁) is reacted with the functional group (R₁) on the ppan prosthetic group of CoA, or on the modified ppan prosthetic group of the CoA analogue, thereby directly attaching the terminal group to the modified antibody or antigen binding fragment thereof or attaching the terminal group to the modified antibody or antigen binding fragment thereof via a Linker Unit (LU).

One embodiment of the Two-Step Method is shown in Scheme (IIa).

wherein X and a corresponding R₁ are as given below in Table 3, and where R₂, A₁, L₂, X₂, L₃, L₄ and TG are as defined herein:

TABLE 3
X                    R1
a thiol              a thiol, a maleimide or a haloacetamide
an azide             an alkyne, a triaryl phosphine, a cyclooctene or an
a triaryl phosphine  oxanobornadiene
                     an azide
an oxanobornadiene   an azide
an alkyne            an azide
an alkene            an azide
a cyclooctene        a diaryl tetrazine
a diaryl tetrazine   a cyclooctene
a monoaryl tetrazine a norbornene
a norbornene         a monoaryl tetrazine
an aldehyde          a hydroxylamine or a hydrazine or
                     NH2—NH—C(═O)—
a ketone             a hydroxylamine or a hydrazine or
                     NH2—NH—C(═O)—
a hydroxylamine      an aldehyde or a ketone
a hydrazine          an aldehyde or a ketone
NH2—NH—C(═O)—        an aldehyde or a ketone
a haloacetamide      a thiol
a maleimide          a thiol

The alkene, alkyne, triaryl phosphine, cyclooctene, oxanobornadiene, diaryl tetrazine, monoaryl tetrazine and norbornene of X and R₁ are optionally substituted.
The Two-Step Method of Scheme (IIa) includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof by:
    • incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a compound of Formula (D),

• • • • thereby attaching an activated 4′-phosphopantetheinyl group of Formula (D-a) to the peptide tag;

• • and
  • (c) reacting the activated 4′-phosphopantetheinyl group with a compound of Formula (IIa):

X-L₂-L₃-L₄-TG   Formula (III-a),

where X, R₁, R₂, A₁, L₂, L₃, L₄ and TG are as defined herein.

As a result of the Two-Step Method of Scheme (IIa) the Terminal group is attached to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (IIb):

where A₁, X₂, L₂, L₃ and L₄ are as defined herein and the * denotes that the modified 4′-phosphopantetheinyl moiety is attached to the small peptide tag.

Another embodiment of the Two-Step Method is shown in Scheme (IIb).

where X, R₁, R₂, L₁, A₂, X₂, L₃, L₄ and TG are as defined herein.
The Two-Step Method of Scheme (IIb) includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a short peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof by:
    • incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a compound of Formula (E),

• • • • thereby attaching an activated 4′-phosphopantetheinyl group of Formula (E-a) to the short peptide tag;

• • and
  • (c) reacting the activated 4′-phosphopantetheinyl group with a compound of Formula (II-c):

X-L₃-L₄-TG   Formula (III-c),

where X, R₁, R₂, L₁, A₂, L₃, L₄ and TG are as defined herein.

As a result of the Two-Step Method of Scheme (IIb) the terminal group is attached to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (II-d):

where L₁, A₂, X₂, L₃ and L₄ are as defined herein and the * denotes that the modified 4′-phosphopantetheinyl moiety is attached to the small peptide tag.

Another embodiment of the Two-Step Method is shown in Scheme (II-c).

where X, R₁, R₂, L₁, L₂, X₂, A₃, L₄ and TG are as defined herein.
The Two-Step Method of Scheme (IIc) includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a short peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof by:
    • incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a compound of Formula (F),

• • • • thereby attaching an activated 4′-phosphopantetheinyl group of Formula (F-a) to the short peptide tag;

• • and
  • (c) reacting the activated 4′-phosphopantetheinyl group with a compound of Formula (IIe):

X-L₄-TG   Formula (II-e),

where X, R₁, R₂, L₁, L₂, L₃, L₄ and TG are as defined herein.

As a result of the Two-Step Method of Scheme (IIc) the terminal group is attached to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (III-f):

where L₁, L₂, A₃, X₂ and L₄ are as defined herein and the * denotes that the modified 4′-phosphopantetheinyl moiety is attached to the small peptide tag.

Another embodiment of the Two-Step Method is shown in Scheme (IId).

where X, R₁, R₂, L₁, L₂, L₃, A₄, X₂ and TG are as defined herein.
The Two-Step Method of Scheme (IId) includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a short peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof by:
    • incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a compound of Formula (G),

• • • • thereby attaching an activated 4′-phosphopantetheinyl of Formula (G-a) to the short peptide tag;

• • and
  • (c) reacting the activated 4′-phosphopantetheinyl group with a compound of Formula (II-g):

X-TG   Formula (II-g),

where X, R₁, R₂, L₁, L₂, L₃, L₄ and TG are as defined herein.

As a result of the Two-Step Method of Scheme (IId) the terminal group is attached to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (III-h):

where L₁, L₂, L₃, A₄ and X₂ are as defined herein and the * denotes that the modified 4′-phosphopantetheinyl moiety is attached to the small peptide tag.

In certain embodiments of the Two-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted with a compound having the structure of Formula (D), Formula (E), Formula (F) or Formula (G) and a 4′-phosphopantetheinyl transferase enzyme that is co-expressed in the same cell as the expressed modified antibody or antigen binding fragment thereof. In certain embodiments of the Two-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted in the cell culture media with a compound having the structure of Formula (D), Formula (E), Formula (F) or Formula (G) and 4′-phosphopantetheinyl transferase enzyme produced in the same or in another cell. In certain embodiments of the Two-Step Methods described herein, the 4′-phosphopantetheinyl transferase enzyme is immobilized on solid support. In certain embodiments the solid support is optionally comprised of a polymer on a bead or a column.

Table 4 shows certain embodiments of the activated 4′-phosphopantetheinyl groups of Formula (D-a) and compounds of Formula (III-a) used in the Two-step methods and the Three-step methods described herein and the resulting modified serine located in the modified antibody or antigen binding fragment thereof. Note A₁, L₂, L³, L₄, R₅, R₆, R₇, R₈ and TG are as defined herein, and Y is

TABLE 4
X—L2—L3—L4—TG Formula (IIa)
HC≡C—L2—L3—L4—TG
HC≡C—L2—L3—L4—TG
N3—L2—L3—L4—TG
N3—L2—L3—L4—TG
NH2—O—L2—L3—L4—TG
NH2—O—L2—L3—L4—TG
CH3C(═O)—L2—L3—L4—TG
HC(═O)—L2—L3—L4—TG
HS—L2—L3—L4—TG
HS—L2—L3—L4—TG
HS—L2—L3—L4—TG
NH2—NH—C(═O)—L2—L3—L4—TG
NH2—NH—C(═O)—L2—L3—L4—TG
R5C(═O)—L2—L3—L4—TG
HC(═O)—L2—L3—L4—TG
HS—L2—L3—L4—TG
N3—L2—L3—L4—TG
N3—L2—L3—L4—TG
N3—L2—L3—L4—TG
N3—L2—L3—L4—TG
N3—L2—L3—L4—TG

Table 5 shows certain embodiments of the activated 4′-phosphopantetheinyl groups of Formula (E-a) and compounds of Formula (III-c) used in the Two-step methods and the Three-step methods described herein and the resulting modified serine located in the modified antibody or antigen binding fragment thereof. Note L₁, A₂, L₃, L₄, R₅, R₆, R₇, R₈ and TG are as defined herein, and Y is

TABLE 5
X—L3—L4—TG Formula (II-c)
HC≡C—L3—L4—TG
HC≡C—L3—L4—TG
N3—L3—L4—TG
N3—L3—L4—TG
NH2—O—L3—L4—TG
NH2—O—L3—L4—TG
CH3C(═O)—L3—L4—TG
HC(═O)—L3—L4—TG
HS—L3—L4—TG
HS—L3—L4—TG
HS—L3—L4—TG
NH2—NH—C(═O)—L3—L4—TG
NH2—NH—C(═O)—L3—L4—TG
R5C(═O)—L3—L4—TG
HC(═O)—L3—L4—TG
SH—L3—L4—TG
N3—L3—L4—TG
N3—L3—L4—TG
N3—L3—L4—TG
N3—L3—L4—TG
N3—L3—L4—TG

Table 6 shows certain embodiments of the activated 4′-phosphopantetheinyl groups of Formula (F-a) and compounds of Formula (II-e) used in the Two-step methods and the Three-step methods described herein and the resulting modified serine located in the modified antibody or antigen binding fragment thereof. Note L₁, L₂, A₃, L₄, R₅, R₆, R₇, R₈ and TG are as defined herein, and Y is

TABLE 6
X—L4—TG Formula (II-e)
HC≡C—L4—TG
HC≡C—L4—TG
N3—L4—TG
N3—L4—TG
NH2—O—L4—TG
NH2—O—L4—TG
CH3C(═O)—L4—TG
HC(═O)—L4—TG
HS—L4—TG
HS—L4—TG
HS—L4—TG
NH2—NH—C(═O)—L4—TG
NH2—NH—C(═O)—L4—TG
R5C(═O)—L4—TG
HC(═O)—L4—TG
HS—L4—TG
N3—L4—TG
N3—L4—TG
N3—L4—TG
N3—L4—TG
N3—L4—TG

Table 7 shows certain embodiments of the activated 4′-phosphopantetheinyl groups of Formula (G-a) and compounds of Formula (II-g) used in the Two-step methods and the Three-step methods described herein and the resulting modified serine located in the modified antibody or antigen binding fragment thereof. Note L₁, L₂, L₃, A₄, R₅, Re, R₇, R₈ and TG are as defined herein, and Y is

TABLE 7
X—TG Formula (II-g)
HC≡—C—TG
HC≡—C—TG
N3—TG
N3—TG
NH2—O—TG
NH2—O—TG
CH3C(═O)—TG
HC(═O)—TG
HS—TG
HS—TG
HS—TG
NH2—NH—C(═O)—TG
NH2—NH—C(═O)—TG
R5C(═O)—TG
HC(═O)—TG
HS—TG
N3—TG
N3—TG
N3—TG
N3—TG
N3—TG

Three-Step Method

Alternatively, the modified antibodies or antigen binding fragment thereof provided herein are site-specifically labeled by a three-step method, wherein, in the first step a protected ppan prosthetic group of CoA, or a protected modified ppan prosthetic group of the CoA analogue, is attached to the short peptide tag by a phosphodiester bond formed between the 4′-phosphopantetheinyl moiety and the hydroxyl group of the conserved serine residue of the short peptide tag incorporated into the antibody. In the second step the protected ppan prosthetic group of CoA, or protected modified ppan prosthetic group of the CoA analogue, is deprotected; thereby generating a reactive functional group (R₁). In the third step a terminal group (TG) linked, or directly attached to, a group which is reactive with the functional group (R₁) is reacted with the functional group (R₁) on the ppan prosthetic group of CoA, or on the modified ppan prosthetic group of the CoA analogue, thereby directly attaching the terminal group to the modified antibody or antigen binding fragment thereof or attaching the terminal group to the modified antibody or antigen binding fragment thereof via a Linker Unit (LU).

One embodiment of the Three-Step Method is shown in Scheme (IIIa).

wherein X and a corresponding R₁ are as given in Table 3, and where PG is a protecting group and R₂, A₁, L₂, X₂, L₃, L₄ and TG are as defined herein.
The Three-Step Method of Scheme (IIIa) includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a short peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof by:
    • incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a compound of Formula H,

• • • • thereby attaching a protected 4′-phosphopantetheinyl group of Formula (H-a) to the short peptide tag;

• • (c) deprotecting the protected 4′-phosphopantetheinyl group to give an activated 4′-phosphopantetheinyl group of Formula (D-a)

• • and
  • (d) reacting the activated 4′-phosphopantetheinyl group with a compound of Formula (IIa):

X-L₂-L₃-L₄-TG   Formula (III-a),

where PG is a protecting group and X, R₁, R₂, A₁, L₂, L₃, L₄ and TG are as defined herein.

As a result of the Three-Step Method of Scheme (IIIa) the terminal group is attached to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (IIb):

where A₁, X₂, L₂, L₃ and L₄ are as defined herein and the * denotes that the modified 4′-phosphopantetheinyl moiety is attached to the small peptide tag.

Another embodiment of the Three-Step Method is shown in Scheme (IIIb).

where PG is a protecting group and X, R₁, R₂, L₁, A₂, X₂, L₃, L₄ and TG are as defined herein.
The Three-Step Method of Scheme (IIIb) includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a short peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity;
  • (b) labeling modified antibody or antigen binding fragment thereof by:
    • incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a compound of Formula (J),

• • • • thereby attaching an protected 4′-phosphopantetheinyl group of Formula (I-a) to the short peptide tag;

• • (c) deprotecting the protected 4′-phosphopantetheinyl group to give an activated 4′-phosphopantetheinyl group of Formula (E-a)

• • and
  • (d) reacting the activated 4′-phosphopantetheinyl group with a compound of Formula (II-c):

X-L₃-L₄-TG   Formula (II-c),

where PG is a protecting group and X, R₁, R₂, L₁, A₂, L₃, L₄ and TG are as defined herein.

As a result of the Three-Step Method of Scheme (IIIb) the terminal group is attached to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (II-d):

where L₁, A₂, X₂, L₃ and L₄ are as defined herein and the * denotes that the modified 4′-phosphopantetheinyl moiety is attached to the small peptide tag.

Another embodiment of the Three-Step Method is shown in Scheme (IIIc).

where PG is a protecting group and X, R₁, R₂, L₁, L₂, X₂, A₃, L₄ and TG are as defined herein.
The Three-Step Method of Scheme (IIIc) includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a short peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof by:
    • incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a compound of Formula (K),

• • • • thereby attaching an protected 4′-phosphopantetheinyl group of Formula (K-a) to the short peptide tag;

• • (c) deprotecting the protected 4′-phosphopantetheinyl group to give an activated 4′-phosphopantetheinyl group of Formula (F-a)
  • and

• • (d) reacting the activated 4′-phosphopantetheinyl group with a compound of Formula (IIe):

X-L₄-TG   Formula (II-e),

where PG is a protecting group and X, R₁, R₂, L₁, L₂, L₃, L₄ and TG are as defined herein.

As a result of the Two-Step Method of Scheme (IIIc) the terminal group is attached to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (III-f):

where L₁, L₂, A₃, X₂ and L₄ are as defined herein and the * denotes that the modified 4′-phosphopantetheinyl moiety is attached to the small peptide tag.

Another embodiment of the Three-Step Method is shown in Scheme (IIId).

where PG is a protecting group and X, R₁, R₂, L₁, L₂, L₃, A₄, X₂ and TG are as defined herein.
The Three-Step Method of Scheme (IIId) includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a short peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof by:
    • incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a compound of Formula (L),

• • • • thereby attaching an activated 4′-phosphopantetheinyl of Formula (L-a) to the short peptide tag;

• • (c) deprotecting the protected 4′-phosphopantetheinyl group to give an activated 4′-phosphopantetheinyl group of Formula (G-a)

• • and
  • (d) reacting the activated 4′-phosphopantetheinyl group with a compound of Formula (II-g):

X-TG   Formula (II-g),

where PG is a protecting group X, R₁, R₂, L₁, L₂, L₃, L₄ and TG are as defined herein.

As a result of the Three-Step Method of Scheme (IIId) the terminal group is attached to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (III-h):

where L₁, L₂, L₃, A₄ and X₂ are as defined herein and the * denotes that the modified 4′-phosphopantetheinyl moiety is attached to the small peptide tag.

Scheme (IIIe) shows a certain embodiment of the Three-Step Method where the modified antibodies or antigen binding fragment thereof provided herein are site-specifically labeled by a CoA analogue where the thiol of the 4′-phosphopantetheinyl prosthetic group is protected. In step 1 the protected CoA analogue reacts with the conserved serine of the short peptide tag engineered into the antibody thereby attaching the prosthetic group containing the protected thiol to the short peptide tag through the formation of a phosphodiester bond with the hydroxyl group of the conserved serine residue of the short peptide tag. In the second step the thiol protecting group is removed and the resulting modified antibody or antigen binding fragment thereof having a pendant 4′-phosphopantetheinyl group is reacted with a thiol reactive group linked to a terminal group (TG).

where X_SH, protecting group (PG), R₂, A₂, L₃, L₄ and TG are as defined herein.

Scheme (IIIf) shows a certain embodiment of the Three-Step Method where the modified antibodies or antigen binding fragment thereof provided herein are site-specifically labeled using a CoA where the thiol of the 4′-phosphopantetheinyl prosthetic group is protected. In step 1 the protected CoA reacts with the conserved serine of the short peptide tag engineered into the antibody thereby attaching the prosthetic group containing the protected thiol to the short peptide tag through the formation of a phosphodiester bond with the hydroxyl group of the conserved serine residue of the short peptide tag. In the second step the thiol protecting group is removed and the resulting modified antibody or antigen binding fragment thereof having a pendant 4′-phosphopantetheinyl group is reacted with a thiol reactive group linked to a terminal group (TG).

where X_SH, protecting group (PG), R₂, A₂, L₃, L₄ and TG are as defined herein.
In the Three-Step Method of Scheme (IIIe) and Scheme (IIIf), the thiol protecting group includes, but is not limited to, acetyl, acetamidomethyl, benzyl, 4-methylbenzyl, 4-methoxybenzyl, trityl, methoxytrityl, t-butyl, t-butylthiol and 3-nitro-2-pyridinesulphenyl. The thiol reactive group of Scheme (IIIe) and Scheme (IIIf) includes, but is not limited to, maleimide, a haloacetyl, a haloacetamide, a pyridyldisulfide and a vinyl sulfone.
The Three-Step Method of Scheme (IIIf) includes the steps of:

• • (a) providing a modified antibody or antigen binding fragment thereof which has been engineered to contain a short peptide tag, and wherein the peptide tag is a substrate of an enzyme having 4′-phosphopantetheinyl transferase activity;
  • (b) labeling the modified antibody or antigen binding fragment thereof by:
    • (i) incubating the modified antibody or antigen binding fragment thereof with an enzyme having 4′-phosphopantetheinyl transferase activity in the presence of a thiol protected coenzyme A, thereby attaching the thiol protected prosthetic group of coenzyme A to the short peptide tag;
    • (ii) deprotecting the thiol group thereby forming a 4′-phosphopantetheinyl group having a pendant thiol,
    • and
    • (iii) reacting the pendant thiol of the 4′-phosphopantetheinyl group with a compound of Formula (IIIf):

X_SH-L₂-L₃-L₄-TG   Formula (IIIf).

where X_SH is a thiol reactive group including, but not limited to, a maleimide, a haloacetyl, a haloacetamide, a pyridyldisulfide and a vinyl sulfone. A₂, L₃, L₄ and TG are as defined herein. In addition, in the Two-Step Method of Scheme (IIf) the terminal group is attached to the modified antibody or antigen binding fragment thereof via a linker having the structure according to Formula (III-a):

The * denotes the 4′-phosphopantetheinyl moiety is attached to the small peptide tag and L₂, L₃, L₄ and TG are as defined herein. In this embodiment X₂ is a group formed by reaction of X_SH and the pendant thiol, including, but not limited to,

and —S—S—.

In certain embodiments X_SH-L₂-L₃-L₄-TG is

wherein:

X₁ is a bond, —C(═O)—, —NH—, —NHC(═O)—, —(C(═O)NH(CH₂)_n)_m—,

In other embodiments X_SH-L₂-L₃-L₄-TG is

In certain embodiments of the Three-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted with a compound having the structure of Formula (H), Formula (J), Formula (K) or Formula (L) and a 4′-phosphopantetheinyl transferase enzyme that is co-expressed in the same cell as the expressed modified antibody or antigen binding fragment thereof. In certain embodiments of the Two-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted in the cell culture media with a compound having the structure of Formula (H), Formula (J), Formula (K) or Formula (L) and 4′-phosphopantetheinyl transferase enzyme co-expressed by the same or another cell. In certain embodiments of the Two-Step Methods described herein, the 4′-phosphopantetheinyl transferase enzyme is immobilized on solid support. In certain embodiments the solid support is optionally comprised of a polymer on a bead or a column.

In certain embodiments of the Three-Step Method, the modified antibody or antigen binding fragment thereof will be contacted with a 4′-phosphopantetheinyl transferase enzyme that is coexpressed in the same cell. In certain embodiments of the Three-Step Method, the thiol protected coenzyme A is acetyl-coenzyme A. In certain embodiments of the Three-Step Method, the modified antibody or antigen binding fragment thereof is contacted in the cell culture media with the thiol protected coenzyme A and a 4′-phosphopantetheinyl transferase enzyme co-expressed by the same or another cell. In certain embodiments of the Three-Step Method, the 4′-phosphopantetheinyl transferase enzyme is immobilized on solid support. The solid support is optionally comprised of a polymer on a bead or a column.

In certain embodiments of the One-Step Method, Two-Step Methods or the Three-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted, depending on the Method used, with a compound having the structure of Formula (A), Formula (B), Formula (C), Formula (D), Formula (E), Formula (F), Formula (G), Formula (H), Formula (J), Formula (K) or Formula (L) and a 4′-phosphopantetheinyl transferase enzyme at temperatures between 0 and 37 degree Celsius in buffer or media adjusted to pH values between 3 and 10, preferably between 7 and 9 and most preferably around 8, for reaction times between 5 mins and 48 hours.

In certain embodiments of the One-Step Method, Two-Step Methods or the Three-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted, depending on the Method used, with a compound having the structure of Formula (A), Formula (B), Formula (C), Formula (D), Formula (E), Formula (F), Formula (G), Formula (H), Formula (J), Formula (K) or Formula (L) in the presence of 4′-phosphopantetheinyl transferase in solution. In other embodiments of the One-Step Method, Two-Step Methods or the Three-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted, depending on the Method used, with a compound having the structure of Formula (A), Formula (B), Formula (C), Formula (D), Formula (E), Formula (F), Formula (G), Formula (H), Formula (J), Formula (K) or Formula (L) in the presence of 4′-phosphopantetheinyl transferase in cell media. In certain embodiments of the One-Step Method, Two-Step Methods or the Three-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted, depending on the Method used, with a compound having the structure of Formula (A), Formula (B), Formula (C), Formula (D), Formula (E), Formula (F), Formula (G), Formula (H), Formula (J), Formula (K) or Formula (L) in the presence of 4′-phosphopantetheinyl transferase inside a cell.

In certain embodiments of the One-Step Method, Two-Step Methods or the Three-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted, depending on the Method used, with a compound having the structure of Formula (A), Formula (B), Formula (C), Formula (D), Formula (E), Formula (F), Formula (G), Formula (H), Formula (J), Formula (K) or Formula (L) in the presence of 4′-phosphopantetheinyl transferase, wherein the 4′-phosphopantetheinyl transferase is immobilized on a surface. In certain embodiments the surface is polymer bead.

In certain embodiments of the One-Step Method, Two-Step Methods or the Three-Step Methods described herein, the modified antibody or antigen binding fragment thereof is contacted, depending on the Method used, with a compound having the structure of Formula (A), Formula (B), Formula (C), Formula (D), Formula (E), Formula (F), Formula (G), Formula (H), Formula (J), Formula (K) or Formula (L) in the presence of 4′-phosphopantetheinyl transferase, wherein the modified antibody or antigen binding fragment thereof is immobilized on a surface. In certain embodiments the surface is polymer bead.

In certain embodiments, the modified antibody or antigen binding fragment thereof provided herein are labeled with a terminal group (“TG”)-to-antibody ratio of 1, 2, 3, 4, 5, 6, 7, or 8, wherein the modified antibody or antigen binding fragment thereof contains 1, 2, 3, 4, 5, 6, 7, or 8 short peptide tags located in the structural loop of the antibody and where the short peptide tags are substrates of Sfp 4′-phosphopantetheinyl transferase, AcpS 4′-phosphopantetheinyl transferase, T. maritima 4′-phosphopantetheinyl transferase, C. thermocellum 4′-phosphopantetheinyl transferase, human 4′-phosphopantetheinyl transferase, or a mutant form thereof. For example, a TG-to-antibody ratio of 4 is achieved by conjugating the terminal group to four copies of inserted S6 tags, or to four copies of inserted ybbR tags or to four copies of inserted A1 tags, or to a combination of two copies of inserted S6 tags and two copies of inserted ybbR tags. In certain embodiments, the modified antibodies or antigen binding fragment thereof provided herein are labeled with two different terminal groups using two different peptide tags and two different 4′-phosphopantetheinyl transferases. By way of example, two copies of the A1 tag are conjugated to a first terminal group using the AcpS 4′-phosphopantetheinyl transferase. Then a second terminal group is attached to two copies of an S6 tag using the Sfp 4′-phosphopantetheinyl transferase (see, e.g., Zhou et al., ACS Chem. Biol. 2:337-346, 2007).

In certain embodiments, the modified antibodies or antigen binding fragment thereof provided herein are labeled with a terminal group (TG)-to-antibody ratio (e.g., DAR) of 1, 2, 3, 4, 5, 6, 7, or 8, wherein the modified antibody or antigen binding fragment thereof contains 1, 2, 3, 4, 5, 6, 7, or 8 short peptide tags located in the structural loop of the antibody and where the short peptide tags are substrates of Sfp 4′-phosphopantetheinyl transferase, AcpS 4′-phosphopantetheinyl transferase, T. maritima 4′-phosphopantetheinyl transferase, C. thermocellum 4′-phosphopantetheinyl transferase, human 4′-phosphopantetheinyl transferase, or a mutant form thereof. For example, a TG-to-antibody ratio of 4 is achieved by conjugating a drug moiety to four copies of inserted S6 tags, or to four copies of inserted ybbR tags, or to four copies of inserted A1 tags, or to a combination of two copies of inserted S6 tags and two copies of inserted ybbR tags. In certain embodiments, the modified antibodies or antigen binding fragment thereof provided herein are labeled with two different drug moieties using two different peptide tags and two different 4′-phosphopantetheinyl transferases. By way of example, two copies of the A1 tag are conjugated to a first drug moiety using the AcpS 4′-phosphopantetheinyl transferase. Then a second drug moiety is attached to two copies of an S6 tag using the Sfp 4′-phosphopantetheinyl transferase (see, e.g., Zhou et al., ACS Chem. Biol. 2:337-346, 2007).

3. Further Alteration of the Framework of Fc Region

The present invention provides site-specific labeled immunoconjugates. The immunoconjugates of the invention may comprise modified antibodies or antigen binding fragments thereof that further comprise modifications to framework residues within V_H and/or V_L, e.g. to improve the properties of the antibody. Typically such framework modifications are made to decrease the immunogenicity of the antibody. For example, one approach is to “back-mutate” one or more framework residues to the corresponding germline sequence. More specifically, an antibody that has undergone somatic mutation may contain framework residues that differ from the germline sequence from which the antibody is derived. Such residues can be identified by comparing the antibody framework sequences to the germline sequences from which the antibody is derived. To return the framework region sequences to their germline configuration, the somatic mutations can be “back-mutated” to the germline sequence by, for example, site-directed mutagenesis. Such “back-mutated” antibodies are also intended to be encompassed by the invention.

Another type of framework modification involves mutating one or more residues within the framework region, or even within one or more CDR regions, to remove T-cell epitopes to thereby reduce the potential immunogenicity of the antibody. This approach is also referred to as “deimmunization” and is described in further detail in U.S. Patent Publication No. 20030153043 by Carr et al.

In addition or alternative to modifications made within the framework or CDR regions, antibodies of the invention may be engineered to include modifications within the Fc region, typically to alter one or more functional properties of the antibody, such as serum half-life, complement fixation, Fc receptor binding, and/or antigen-dependent cellular cytotoxicity. Furthermore, an antibody of the invention may be chemically modified (e.g., one or more chemical moieties can be attached to the antibody) or be modified to alter its glycosylation, again to alter one or more functional properties of the antibody. Each of these embodiments is described in further detail below.

In one embodiment, the hinge region of CH1 is modified such that the number of cysteine residues in the hinge region is altered, e.g., increased or decreased. This approach is described further in U.S. Pat. No. 5,677,425 by Bodmer et al. The number of cysteine residues in the hinge region of CH1 is altered to, for example, facilitate assembly of the light and heavy chains or to increase or decrease the stability of the antibody.

In another embodiment, the Fc hinge region of an antibody is mutated to decrease the biological half-life of the antibody. More specifically, one or more amino acid mutations are introduced into the CH2-CH3 domain interface region of the Fc-hinge fragment such that the antibody has impaired Staphylococcyl protein A (SpA) binding relative to native Fc-hinge domain SpA binding. This approach is described in further detail in U.S. Pat. No. 6,165,745 by Ward et al.

In yet other embodiments, the Fc region is altered by replacing at least one amino acid residue with a different amino acid residue to alter the effector functions of the antibody. For example, one or more amino acids can be replaced with a different amino acid residue such that the antibody has an altered affinity for an effector ligand but retains the antigen-binding ability of the parent antibody. The effector ligand to which affinity is altered can be, for example, an Fc receptor or the C1 component of complement. This approach is described in, e.g., U.S. Pat. Nos. 5,624,821 and 5,648,260, both by Winter et al.

In another embodiment, one or more amino acids selected from amino acid residues can be replaced with a different amino acid residue such that the antibody has altered Clq binding and/or reduced or abolished complement dependent cytotoxicity (CDC). This approach is described in, e.g., U.S. Pat. No. 6,194,551 by Idusogie et al.

In another embodiment, one or more amino acid residues are altered to thereby alter the ability of the antibody to fix complement. This approach is described in, e.g., the PCT Publication WO 94/29351 by Bodmer et al. In a specific embodiment, one or more amino acids of an antibody or antigen binding fragment thereof of the present invention are replaced by one or more allotypic amino acid residues, such as those shown in FIG. 4 for the IgG1 subclass and the kappa isotype. Allotypic amino acid residues also include, but are not limited to, the constant region of the heavy chain of the IgG1, IgG2, and IgG3 subclasses as well as the constant region of the light chain of the kappa isotype as described by Jefferis et al., MAbs. 1:332-338 (2009).

In yet another embodiment, the Fc region is modified to increase the ability of the antibody to mediate antibody dependent cellular cytotoxicity (ADCC) and/or to increase the affinity of the antibody for an Fcγ receptor by modifying one or more amino acids. This approach is described in, e.g., the PCT Publication WO 00/42072 by Presta. Moreover, the binding sites on human IgG1 for FcγRI, FcγRII, FcγRII and FcRn have been mapped and variants with improved binding have been described (see Shields et al., J. Biol. Chem. 276:6591-6604, 2001).

In still another embodiment, the glycosylation of an antibody is modified. For example, an aglycosylated antibody can be made (i.e., the antibody lacks glycosylation). Glycosylation can be altered to, for example, increase the affinity of the antibody for “antigen.” Such carbohydrate modifications can be accomplished by, for example, altering one or more sites of glycosylation within the antibody sequence. For example, one or more amino acid substitutions can be made that result in elimination of one or more variable region framework glycosylation sites to thereby eliminate glycosylation at that site. Such aglycosylation may increase the affinity of the antibody for antigen. Such an approach is described in, e.g., U.S. Pat. Nos. 5,714,350 and 6,350,861 by Co et al.

Additionally or alternatively, an antibody can be made that has an altered type of glycosylation, such as a hypofucosylated antibody having reduced amounts of fucosyl residues or an antibody having increased bisecting GlcNac structures. Such altered glycosylation patterns have been demonstrated to increase the ADCC ability of antibodies. Such carbohydrate modifications can be accomplished by, for example, expressing the antibody in a host cell with altered glycosylation machinery. Cells with altered glycosylation machinery have been described in the art and can be used as host cells in which to express recombinant antibodies of the invention to thereby produce an antibody with altered glycosylation. For example, EP 1,176,195 by Hang et al. describes a cell line with a functionally disrupted FUT8 gene, which encodes a fucosyl transferase, such that antibodies expressed in such a cell line exhibit hypofucosylation. PCT Publication WO 03/035835 by Presta describes a variant CHO cell line, Lecl3 cells, with reduced ability to attach fucose to Asn(297)-linked carbohydrates, also resulting in hypofucosylation of antibodies expressed in that host cell (see also Shields et al., (2002) J. Biol. Chem. 277:26733-26740). PCT Publication WO 99/54342 by Umana et al. describes cell lines engineered to express glycoprotein-modifying glycosyl transferases (e.g., beta(1,4)-N acetylglucosaminyltransferase IIII (GnTIII)) such that antibodies expressed in the engineered cell lines exhibit increased bisecting GlcNac structures which results in increased ADCC activity of the antibodies (see also Umana et al., Nat. Biotech. 17:176-180, 1999).

In another embodiment, the antibody is modified to increase its biological half-life. Various approaches are possible. For example, one or more of the following mutations can be introduced: T252L, T254S, T256F, as described in U.S. Pat. No. 6,277,375 to Ward. Alternatively, to increase the biological half-life, the antibody can be altered within the CH1 or C_L region to contain a salvage receptor binding epitope taken from two loops of a CH2 domain of an Fc region of an IgG, as described in U.S. Pat. Nos. 5,869,046 and 6,121,022 by Presta et al.

4. Antibody Conjugates

The present invention provides site-specific labeling methods, modified antibodies and antigen binding fragments thereof, and immunoconjugates prepared accordingly. Using the methods of the invention, a modified antibody or antigen binding fragments thereof can be conjugated to a label, such as a drug moiety, e.g., an anti-cancer agent, an autoimmune treatment agent, an anti-inflammatory agent, an antifungal agent, an antibacterial agent, an anti-parasitic agent, an anti-viral agent, or an anesthetic agent. An antibody or antigen binding fragments can also be conjugated using several identical or different labeling moieties combining the methods of the invention with other conjugation methods.

In certain embodiments, the terminal group of the immunoconjugates of the present invention is selected from a V-ATPase inhibitor, a HSP90 inhibitor, an IAP inhibitor, an mTor inhibitor, a microtubule stabilizer, a microtubule destabilizers, an auristatin, a dolastatin, a maytansinoid, a MetAP (methionine aminopeptidase), an inhibitor of nuclear export of proteins CRM1, a DPPIV inhibitor, proteasome inhibitors, an inhibitors of phosphoryl transfer reactions in mitochondria, a protein synthesis inhibitor, a kinase inhibitor, a CDK2 inhibitor, a CDK9 inhibitor, an EG5 inhibitor, an HDAC inhibitor, a DNA damaging agent, a DNA alkylating agent, a DNA intercalator, a DNA minor groove binder and a DHFR inhibitor.

Further, the modified antibodies or antigen binding fragments of the present invention may be conjugated to a therapeutic moiety or drug moiety that modifies a given biological response. Therapeutic moieties or drug moieties are not to be construed as limited to classical chemical therapeutic agents. For example, the drug moiety may be a protein, peptide, or polypeptide possessing a desired biological activity. Such proteins may include, for example, a toxin such as abrin, ricin A, pseudomonas exotoxin, cholera toxin, or diphtheria toxin, a protein such as tumor necrosis factor, α-interferon, 1-interferon, nerve growth factor, platelet derived growth factor, tissue plasminogen activator, a cytokine, an apoptotic agent, an anti-angiogenic agent, or, a biological response modifier such as, for example, a lymphokine.

In one embodiment, the modified antibodies or antigen binding fragments of the present invention are conjugated to a therapeutic moiety, such as a cytotoxin, a drug (e.g., an immunosuppressant) or a radiotoxin. Examples of cytotoxin include but not limited to, taxanes (see, e.g., International (PCT) Patent Application Nos. WO 01/38318 and PCT/US03/02675), DNA-alkylating agents (e.g., CC-1065 analogs), anthracyclines, tubulysin analogs, duocarmycin analogs, auristatin E, auristatin F, maytansinoids, and cytotoxic agents comprising a reactive polyethylene glycol moiety (see, e.g., Sasse et al., J. Antibiot. (Tokyo), 53, 879-85 (2000), Suzawa et al., Bioorg. Med. Chem., 8, 2175-84 (2000), Ichimura et al., J. Antibiot. (Tokyo), 44, 1045-53 (1991), Francisco et al., Blood (2003) (electronic publication prior to print publication), U.S. Pat. Nos. 5,475,092, 6,340,701, 6,372,738, and 6,436,931, U.S. Patent Application Publication No. 2001/0036923 A1, Pending U.S. patent application Ser. Nos. 10/024,290 and 10/116,053, and International (PCT) Patent Application No. WO 01/49698), taxon, cytochalasin B, gramicidin D, ethidium bromide, emetine, mitomycin, etoposide, tenoposide, vincristine, vinblastine, t. colchicin, doxorubicin, daunorubicin, dihydroxy anthracin dione, mitoxantrone, mithramycin, actinomycin D, 1-dehydrotestosterone, glucocorticoids, procaine, tetracaine, lidocaine, propranolol, and puromycin and analogs or homologs thereof. Therapeutic agents also include, for example, anti-metabolites (e.g., methotrexate, 6-mercaptopurine, 6-thioguanine, cytarabine, 5-fluorouracil decarbazine), ablating agents (e.g., mechlorethamine, thioepa chloraxnbucil, meiphalan, carmustine (BSNU) and lomustine (CCNU), cyclothosphamide, busulfan, dibromomannitol, streptozotocin, mitomycin C, and cis-dichlorodiamine platinum (II) (DDP) cisplatin, anthracyclines (e.g., daunorubicin (formerly daunomycin) and doxorubicin), antibiotics (e.g., dactinomycin (formerly actinomycin), bleomycin, mithramycin, and anthramycin (AMC)), and anti-mitotic agents (e.g., vincristine and vinblastine). (See e.g., Seattle Genetics US20090304721).

Other examples of therapeutic cytotoxins that can be conjugated to the modified antibodies or antigen binding fragments of the invention include duocarmycins, calicheamicins, maytansines and auristatins, and derivatives thereof. An example of a calicheamicin antibody conjugate is commercially available (Mylotarg™; Wyeth-Ayerst).

For further discussion of types of cytotoxins, linkers and methods for conjugating therapeutic agents to antibodies, see also Saito et al., (2003) Adv. Drug Deliv. Rev. 55:199-215; Trail et al., (2003) Cancer Immunol. Immunother. 52:328-337; Payne, (2003) Cancer Cell 3:207-212; Allen, (2002) Nat. Rev. Cancer 2:750-763; Pastan and Kreitman, (2002) Curr. Opin. Investig. Drugs 3:1089-1091; Senter and Springer, (2001) Adv. Drug Deliv. Rev. 53:247-264.

According to the present invention, modified antibodies or antigen binding fragments thereof can also be conjugated to a radioactive isotope to generate cytotoxic radiopharmaceuticals, referred to as radioimmunoconjugates. Examples of radioactive isotopes that can be conjugated to antibodies for use diagnostically or therapeutically include, but are not limited to, iodine³¹, indium¹¹¹, yttrium⁹⁰, and lutetium⁷⁷. Methods for preparing radioimmunoconjugates are established in the art. Examples of radioimmunoconjugates are commercially available, including Zevalin™ (DEC Pharmaceuticals) and Bexxar™ (Corixa Pharmaceuticals), and similar methods can be used to prepare radioimmunoconjugates using the antibodies of the invention. In certain embodiments, the macrocyclic chelator is 1,4,7,10-tetraazacyclododecane-N,N′,N″,N′″-tetraacetic acid (DOTA) which can be attached to the antibody via a linker molecule. Such linker molecules are commonly known in the art and described in Denardo et al., (1998) Clin Cancer Res. 4(10):2483-90; Peterson et al., (1999) Bioconjug. Chem. 10(4):553-7; and Zimmerman et al., (1999) Nucl. Med. Biol. 26(8):943-50, each incorporated by reference in their entireties.

The present invention further provides modified antibodies or antigen binding fragments thereof that specifically bind to an antigen conjugated to a heterologous protein or polypeptide (or fragment thereof, preferably to a polypeptide of at least 10, at least 20, at least 30, at least 40, at least 50, at least 60, at least 70, at least 80, at least 90 or at least 100 amino acids) to generate fusion proteins. In particular, the invention provides fusion proteins comprising an antibody fragment described herein (e.g., a Fab fragment, Fd fragment, Fv fragment, F(ab)2 fragment, a V_H domain, a V_H CDR, a V_L domain or a V_L CDR) and a heterologous protein, polypeptide, or peptide.

Additional fusion proteins may be generated through the techniques of gene-shuffling, motif-shuffling, exon-shuffling, and/or codon-shuffling (collectively referred to as “DNA shuffling”). DNA shuffling may be employed to alter the activities of antibodies of the invention or fragments thereof (e.g., antibodies or fragments thereof with higher affinities and lower dissociation rates). See, generally, U.S. Pat. Nos. 5,605,793, 5,811,238, 5,830,721, 5,834,252, and 5,837,458; Patten et al., (1997) Curr. Opinion Biotechnol. 8:724-33; Harayama, (1998) Trends Biotechnol. 16(2):76-82; Hansson et al., (1999) J. Mol. Biol. 287:265-76; and Lorenzo and Blasco, (1998) Biotechniques 24(2):308-313 (each of these patents and publications are hereby incorporated by reference in its entirety). Antibodies or fragments thereof, or the encoded antibodies or fragments thereof, may be altered by being subjected to random mutagenesis by error-prone PCR, random nucleotide insertion or other methods prior to recombination. A polynucleotide encoding an antibody or fragment thereof that specifically binds to an antigen may be recombined with one or more components, motifs, sections, parts, domains, fragments, etc. of one or more heterologous molecules.

Moreover, the modified antibodies or antigen binding fragments thereof of the present invention can be conjugated to marker sequences, such as a peptide to facilitate purification. In preferred embodiments, the marker amino acid sequence is a hexa-histidine peptide, such as the tag provided in a pQE vector (QIAGEN, Inc., 9259 Eton Avenue, Chatsworth, Calif., 91311), among others, many of which are commercially available. As described in Gentz et al., (1989) Proc. Natl. Acad. Sci. USA 86:821-824, for instance, hexa-histidine provides for convenient purification of the fusion protein. Other peptide tags useful for purification include, but are not limited to, the hemagglutinin (“HA”) tag, which corresponds to an epitope derived from the influenza hemagglutinin protein (Wilson et al., (1984) Cell 37:767), and the “FLAG” tag (A. Einhauer et al., J. Biochem. Biophys. Methods 49: 455-465, 2001). According to the present invention, antibodies or antigen binding fragments can also be conjugated to tumor-penetrating peptides in order to enhance their efficacy.

In other embodiments, modified antibodies or antigen binding fragments of the present invention are conjugated to a diagnostic or detectable agent. Such immunoconjugates can be useful for monitoring or prognosing the onset, development, progression and/or severity of a disease or disorder as part of a clinical testing procedure, such as determining the efficacy of a particular therapy. Such diagnosis and detection can accomplished by coupling the antibody to detectable substances including, but not limited to, various enzymes, such as, but not limited to, horseradish peroxidase, alkaline phosphatase, beta-galactosidase, or acetylcholinesterase; prosthetic groups, such as, but not limited to, streptavidin/biotin and avidin/biotin; fluorescent materials, such as, but not limited to, Alexa Fluor 350, Alexa Fluor 405, Alexa Fluor 430, Alexa Fluor 488, Alexa Fluor 500, Alexa Fluor 514, Alexa Fluor 532, Alexa Fluor 546, Alexa Fluor 555, Alexa Fluor 568, Alexa Fluor 594, Alexa Fluor 610, Alexa Fluor 633, Alexa Fluor 647, Alexa Fluor 660, Alexa Fluor 680, Alexa Fluor 700, Alexa Fluor 750, umbelliferone, fluorescein, fluorescein isothiocyanate, rhodamine, dichlorotriazinylamine fluorescein, dansyl chloride or phycoerythrin; luminescent materials, such as, but not limited to, luminol; bioluminescent materials, such as but not limited to, luciferase, luciferin, and aequorin; radioactive materials, such as, but not limited to, iodine (¹³¹I, ¹²⁵I, ¹²³I, and ¹²¹I), carbon (¹⁴C), sulfur (³⁵S), tritium (³H), indium (¹¹⁵In, ¹¹³In, ¹¹²In, and ¹¹¹In), technetium (⁹⁹Tc), thallium (²⁰¹Ti), gallium (⁶⁸Ga, ⁶⁷Ga), palladium (¹⁰³Pd), molybdenum (⁹⁹Mo), xenon (¹³³Xe), fluorine (¹⁸F), ¹⁵³Sm, ¹⁷⁷Lu, ¹⁵⁹Gd, ¹⁴⁹Pm, ¹⁴⁰La, ¹⁷⁵Yb, ¹⁶⁶Ho, ⁹⁰Y, 47Sc, ¹⁸⁶Re, ¹⁸⁸Re, 142 Pr, ¹⁰⁵Rh, ⁹⁷Ru, ⁶⁸Ge, 57Co, ⁶⁵Zn, ⁸⁵Sr, ³²P, ¹⁵³Gd, ¹⁶⁹Yb, ⁵¹Cr, ⁵⁴Mn, ⁷⁵Se, ⁶⁴Cu, ¹¹³Sn, and ¹¹⁷Sn; and positron emitting metals using various positron emission tomographies, and non-radioactive paramagnetic metal ions.

Modified antibodies or antigen binding fragments of the invention may also be attached to solid supports, which are particularly useful for immunoassays or purification of the target antigen. Such solid supports include, but are not limited to, glass, cellulose, polyacrylamide, nylon, polystyrene, polyvinyl chloride or polypropylene.

5. Pharmaceutical Composition

To prepare pharmaceutical or sterile compositions including immunoconjugates, the immunoconjugates of the invention are mixed with a pharmaceutically acceptable carrier or excipient. The compositions can additionally contain one or more other therapeutic agents that are suitable for treating or preventing cancer (breast cancer, colorectal cancer, lung cancer, multiple myeloma, ovarian cancer, liver cancer, gastric cancer, pancreatic cancer, acute myeloid leukemia, chronic myeloid leukemia, osteosarcoma, squamous cell carcinoma, peripheral nerve sheath tumors schwannoma, head and neck cancer, bladder cancer, esophageal cancer, Barretts esophageal cancer, glioblastoma, clear cell sarcoma of soft tissue, malignant mesothelioma, neurofibromatosis, renal cancer, melanoma, prostate cancer, benign prostatic hyperplasia (BPH), gynacomastica, and endometriosis).

Formulations of therapeutic and diagnostic agents can be prepared by mixing with physiologically acceptable carriers, excipients, or stabilizers in the form of, e.g., lyophilized powders, slurries, aqueous solutions, lotions, or suspensions (see, e.g., Hardman et al., Goodman and Gilman's The Pharmacological Basis of Therapeutics, McGraw-Hill, New York, N.Y., 2001; Gennaro, Remington: The Science and Practice of Pharmacy, Lippincott, Williams, and Wilkins, New York, N.Y., 2000; Avis, et al. (eds.), Pharmaceutical Dosage Forms: Parenteral Medications, Marcel Dekker, N.Y., 1993; Lieberman, et al. (eds.), Pharmaceutical Dosage Forms: Tablets, Marcel Dekker, N.Y., 1990; Lieberman, et al. (eds.) Pharmaceutical Dosage Forms: Disperse Systems, Marcel Dekker, N.Y., 1990; Weiner and Kotkoskie, Excipient Toxicity and Safety, Marcel Dekker, Inc., New York, N.Y., 2000).

Selecting an administration regimen for a therapeutic depends on several factors, including the serum or tissue turnover rate of the entity, the level of symptoms, the immunogenicity of the entity, and the accessibility of the target cells in the biological matrix. In certain embodiments, an administration regimen maximizes the amount of therapeutic delivered to the patient consistent with an acceptable level of side effects. Accordingly, the amount of biologic delivered depends in part on the particular entity and the severity of the condition being treated. Guidance in selecting appropriate doses of antibodies, cytokines, and small molecules are available (see, e.g., Wawrzynczak, Antibody Therapy, Bios Scientific Pub. Ltd, Oxfordshire, UK, 1996; Kresina (ed.), Monoclonal Antibodies, Cytokines and Arthritis, Marcel Dekker, New York, N.Y., 1991; Bach (ed.), Monoclonal Antibodies and Peptide Therapy in Autoimmune Diseases, Marcel Dekker, New York, N.Y., 1993; Baert et al., New Engl. J. Med. 348:601-608, 2003; Milgrom et al., New Engl. J. Med. 341:1966-1973, 1999; Slamon et al., New Engl. J. Med. 344:783-792, 2001; Beniaminovitz et al., New Engl. J. Med. 342:613-619, 2000; Ghosh et al., New Engl. J. Med. 348:24-32, 2003; Lipsky et al., New Engl. J. Med. 343:1594-1602, 2000).

Determination of the appropriate dose is made by the clinician, e.g., using parameters or factors known or suspected in the art to affect treatment or predicted to affect treatment. Generally, the dose begins with an amount somewhat less than the optimum dose and it is increased by small increments thereafter until the desired or optimum effect is achieved relative to any negative side effects. Important diagnostic measures include those of symptoms of, e.g., the inflammation or level of inflammatory cytokines produced.

Actual dosage levels of the active ingredients in the pharmaceutical compositions of the present invention may be varied so as to obtain an amount of the active ingredient which is effective to achieve the desired therapeutic response for a particular patient, composition, and mode of administration, without being toxic to the patient. The selected dosage level will depend upon a variety of pharmacokinetic factors including the activity of the particular compositions of the present invention employed, or the ester, salt or amide thereof, the route of administration, the time of administration, the rate of excretion of the particular compound being employed, the duration of the treatment, other drugs, compounds and/or materials used in combination with the particular compositions employed, the age, sex, weight, condition, general health and prior medical history of the patient being treated, and like factors known in the medical arts.

Compositions comprising antibodies or fragments thereof of the invention can be provided by continuous infusion, or by doses at intervals of, e.g., one day, one week, or 1-7 times per week. Doses may be provided intravenously, subcutaneously, topically, orally, nasally, rectally, intramuscular, intracerebrally, or by inhalation. A specific dose protocol is one involving the maximal dose or dose frequency that avoids significant undesirable side effects.

For the immunoconjugates of the invention, the dosage administered to a patient may be 0.0001 mg/kg to 100 mg/kg of the patient's body weight. The dosage may be between 0.0001 mg/kg and 20 mg/kg, 0.0001 mg/kg and 10 mg/kg, 0.0001 mg/kg and 5 mg/kg, 0.0001 and 2 mg/kg, 0.0001 and 1 mg/kg, 0.0001 mg/kg and 0.75 mg/kg, 0.0001 mg/kg and 0.5 mg/kg, 0.0001 mg/kg to 0.25 mg/kg, 0.0001 to 0.15 mg/kg, 0.0001 to 0.10 mg/kg, 0.001 to 0.5 mg/kg, 0.01 to 0.25 mg/kg or 0.01 to 0.10 mg/kg of the patient's body weight. The dosage of the antibodies or fragments thereof of the invention may be calculated using the patient's weight in kilograms (kg) multiplied by the dose to be administered in mg/kg.

Doses of the immunoconjugates the invention may be repeated and the administrations may be separated by at least 1 day, 2 days, 3 days, 5 days, 10 days, 15 days, 30 days, 45 days, 2 months, 75 days, 3 months, or at least 6 months. In a specific embodiment, does of the immunoconjugates of the invention are repeated every 3 weeks.

An effective amount for a particular patient may vary depending on factors such as the condition being treated, the overall health of the patient, the method route and dose of administration and the severity of side effects (see, e.g., Maynard et al., A Handbook of SOPs for Good Clinical Practice, Interpharm Press, Boca Raton, Fla., 1996; Dent, Good Laboratory and Good Clinical Practice, Urch Publ., London, UK, 2001).

The route of administration may be by, e.g., topical or cutaneous application, injection or infusion by intravenous, intraperitoneal, intracerebral, intramuscular, intraocular, intraarterial, intracerebrospinal, intralesional, or by sustained release systems or an implant (see, e.g., Sidman et al., Biopolymers 22:547-556, 1983; Langer et al., J. Biomed. Mater. Res. 15:167-277, 1981; Langer, Chem. Tech. 12:98-105, 1982; Epstein et al., Proc. Natl. Acad. Sci. USA 82:3688-3692, 1985; Hwang et al., Proc. Natl. Acad. Sci. USA 77:4030-4034, 1980; U.S. Pat. Nos. 6,350,466 and 6,316,024). Where necessary, the composition may also include a solubilizing agent and a local anesthetic such as lidocaine to ease pain at the site of the injection. In addition, pulmonary administration can also be employed, e.g., by use of an inhaler or nebulizer, and formulation with an aerosolizing agent. See, e.g., U.S. Pat. Nos. 6,019,968, 5,985,320, 5,985,309, 5,934,272, 5,874,064, 5,855,913, 5,290,540, and 4,880,078; and PCT Publication Nos. WO 92/19244, WO 97/32572, WO 97/44013, WO 98/31346, and WO 99/66903, each of which is incorporated herein by reference their entirety.

A composition of the present invention may also be administered via one or more routes of administration using one or more of a variety of methods known in the art. As will be appreciated by the skilled artisan, the route and/or mode of administration will vary depending upon the desired results. Selected routes of administration for the immunoconjugates of the invention include intravenous, intramuscular, intradermal, intraperitoneal, subcutaneous, spinal or other parenteral routes of administration, for example by injection or infusion. Parenteral administration may represent modes of administration other than enteral and topical administration, usually by injection, and includes, without limitation, intravenous, intramuscular, intraarterial, intrathecal, intracapsular, intraorbital, intracardiac, intradermal, intraperitoneal, transtracheal, subcutaneous, subcuticular, intraarticular, subcapsular, subarachnoid, intraspinal, epidural and intrasternal injection and infusion. Alternatively, a composition of the invention can be administered via a non-parenteral route, such as a topical, epidermal or mucosal route of administration, for example, intranasally, orally, vaginally, rectally, sublingually or topically. In one embodiment, the immunoconjugates of the invention is administered by infusion. In another embodiment, the immunoconjugates of the invention is administered subcutaneously.

If the immunoconjugates of the invention are administered in a controlled release or sustained release system, a pump may be used to achieve controlled or sustained release (see Langer, supra; Sefton, CRC Crit. Ref Biomed. Eng. 14:20, 1987; Buchwald et al., Surgery 88:507, 1980; Saudek et al., N. Engl. J. Med. 321:574, 1989). Polymeric materials can be used to achieve controlled or sustained release of the therapies of the invention (see e.g., Medical Applications of Controlled Release, Langer and Wise (eds.), CRC Pres., Boca Raton, Fla., 1974; Controlled Drug Bioavailability, Drug Product Design and Performance, Smolen and Ball (eds.), Wiley, New York, 1984; Ranger and Peppas, J. Macromol. Sci. Rev. Macromol. Chem. 23:61, 1983; see also Levy et al., Science 228:190, 1985; During et al., Ann. Neurol. 25:351, 1989; Howard et al., J. Neurosurg. 7 1:105, 1989; U.S. Pat. No. 5,679,377; U.S. Pat. No. 5,916,597; U.S. Pat. No. 5,912,015; U.S. Pat. No. 5,989,463; U.S. Pat. No. 5,128,326; PCT Publication No. WO 99/15154; and PCT Publication No. WO 99/20253. Examples of polymers used in sustained release formulations include, but are not limited to, poly(2-hydroxy ethyl methacrylate), poly(methyl methacrylate), poly(acrylic acid), poly(ethylene-co-vinyl acetate), poly(methacrylic acid), polyglycolides (PLG), polyanhydrides, poly(N-vinyl pyrrolidone), poly(vinyl alcohol), polyacrylamide, poly(ethylene glycol), polylactides (PLA), poly(lactide-co-glycolides) (PLGA), and polyorthoesters. In one embodiment, the polymer used in a sustained release formulation is inert, free of leachable impurities, stable on storage, sterile, and biodegradable. A controlled or sustained release system can be placed in proximity of the prophylactic or therapeutic target, thus requiring only a fraction of the systemic dose (see, e.g., Goodson, in Medical Applications of Controlled Release, supra, vol. 2, pp. 115-138, 1984).

Controlled release systems are discussed in the review by Langer, Science 249:1527-1533, 1990). Any technique known to one of skill in the art can be used to produce sustained release formulations comprising one or more immunoconjugates of the invention. See, e.g., U.S. Pat. No. 4,526,938, PCT publication WO 91/05548, PCT publication WO 96/20698, Ning et al., Radiotherapy & Oncology 39:179-189, 1996; Song et al., PDA Journal of Pharmaceutical Science & Technology 50:372-397, 1995; Cleek et al., Pro. Int'l. Symp. Control. Rel. Bioact. Mater. 24:853-854, 1997; and Lam et al., Proc. Int'l. Symp. Control Rel. Bioact. Mater. 24:759-760, 1997, each of which is incorporated herein by reference in their entirety.

If the immunoconjugates of the invention are administered topically, they can be formulated in the form of an ointment, cream, transdermal patch, lotion, gel, shampoo, spray, aerosol, solution, emulsion, or other form well-known to one of skill in the art. See, e.g., Remington's Pharmaceutical Sciences and Introduction to Pharmaceutical Dosage Forms, 19th ed., Mack Pub. Co., Easton, Pa. (1995). For non-sprayable topical dosage forms, viscous to semi-solid or solid forms comprising a carrier or one or more excipients compatible with topical application and having a dynamic viscosity, in some instances, greater than water are typically employed. Suitable formulations include, without limitation, solutions, suspensions, emulsions, creams, ointments, powders, liniments, salves, and the like, which are, if desired, sterilized or mixed with auxiliary agents (e.g., preservatives, stabilizers, wetting agents, buffers, or salts) for influencing various properties, such as, for example, osmotic pressure. Other suitable topical dosage forms include sprayable aerosol preparations wherein the active ingredient, in some instances, in combination with a solid or liquid inert carrier, is packaged in a mixture with a pressurized volatile (e.g., a gaseous propellant, such as freon) or in a squeeze bottle. Moisturizers or humectants can also be added to pharmaceutical compositions and dosage forms if desired. Examples of such additional ingredients are well-known in the art.

If the compositions comprising the immunoconjugates are administered intranasally, it can be formulated in an aerosol form, spray, mist or in the form of drops. In particular, prophylactic or therapeutic agents for use according to the present invention can be conveniently delivered in the form of an aerosol spray presentation from pressurized packs or a nebuliser, with the use of a suitable propellant (e.g., dichlorodifluoromethane, trichlorofluoromethane, dichlorotetrafluoroethane, carbon dioxide or other suitable gas). In the case of a pressurized aerosol the dosage unit may be determined by providing a valve to deliver a metered amount. Capsules and cartridges (composed of, e.g., gelatin) for use in an inhaler or insufflator may be formulated containing a powder mix of the compound and a suitable powder base such as lactose or starch.

Methods for co-administration or treatment with a second therapeutic agent, e.g., a cytokine, steroid, chemotherapeutic agent, antibiotic, or radiation, are known in the art (see, e.g., Hardman et al., (eds.) (2001) Goodman and Gilman's The Pharmacological Basis of Therapeutics, 10.sup.th ed., McGraw-Hill, New York, N.Y.; Poole and Peterson (eds.) (2001) Pharmacotherapeutics for Advanced Practice: A Practical Approach, Lippincott, Williams & Wilkins, Phila., Pa.; Chabner and Longo (eds.) (2001) Cancer Chemotherapy and Biotherapy, Lippincott, Williams & Wilkins, Phila., Pa.). An effective amount of therapeutic may decrease the symptoms by at least 10%; by at least 20%; at least about 30%; at least 40%, or at least 50%.

Additional therapies (e.g., prophylactic or therapeutic agents), which can be administered in combination with the immunoconjugates of the invention may be administered less than 5 minutes apart, less than 30 minutes apart, 1 hour apart, at about 1 hour apart, at about 1 to about 2 hours apart, at about 2 hours to about 3 hours apart, at about 3 hours to about 4 hours apart, at about 4 hours to about 5 hours apart, at about 5 hours to about 6 hours apart, at about 6 hours to about 7 hours apart, at about 7 hours to about 8 hours apart, at about 8 hours to about 9 hours apart, at about 9 hours to about 10 hours apart, at about 10 hours to about 11 hours apart, at about 11 hours to about 12 hours apart, at about 12 hours to 18 hours apart, 18 hours to 24 hours apart, 24 hours to 36 hours apart, 36 hours to 48 hours apart, 48 hours to 52 hours apart, 52 hours to 60 hours apart, 60 hours to 72 hours apart, 72 hours to 84 hours apart, 84 hours to 96 hours apart, or 96 hours to 120 hours apart from the immunoconjugates of the invention. The two or more therapies may be administered within one same patient visit.

In certain embodiments, the immunoconjugates of the invention can be formulated to ensure proper distribution in vivo. For example, the blood-brain barrier (BBB) excludes many highly hydrophilic compounds. To ensure that the therapeutic compounds of the invention cross the BBB (if desired), they can be formulated, for example, in liposomes. For methods of manufacturing liposomes, see, e.g., U.S. Pat. Nos. 4,522,811; 5,374,548; and 5,399,331. The liposomes may comprise one or more moieties which are selectively transported into specific cells or organs, thus enhance targeted drug delivery (see, e.g., Ranade, (1989) J. Clin. Pharmacol. 29:685). Exemplary targeting moieties include folate or biotin (see, e.g., U.S. Pat. No. 5,416,016 to Low et al.); mannosides (Umezawa et al., (1988) Biochem. Biophys. Res. Commun. 153:1038); antibodies (Bloeman et al., (1995) FEBS Lett. 357:140; Owais et al., (1995) Antimicrob. Agents Chemother. 39:180); surfactant protein A receptor (Briscoe et al., (1995) Am. J. Physiol. 1233:134); p 120 (Schreier et al, (1994) J. Biol. Chem. 269:9090); see also K. Keinanen; M. L. Laukkanen (1994) FEBS Lett. 346:123; J. J. Killion; I. J. Fidler (1994) Immunomethods 4:273.

The invention provides protocols for the administration of pharmaceutical composition comprising immunoconjugates of the invention alone or in combination with other therapies to a subject in need thereof. The therapies (e.g., prophylactic or therapeutic agents) of the combination therapies of the present invention can be administered concomitantly or sequentially to a subject. The therapy (e.g., prophylactic or therapeutic agents) of the combination therapies of the present invention can also be cyclically administered. Cycling therapy involves the administration of a first therapy (e.g., a first prophylactic or therapeutic agent) for a period of time, followed by the administration of a second therapy (e.g., a second prophylactic or therapeutic agent) for a period of time and repeating this sequential administration, i.e., the cycle, in order to reduce the development of resistance to one of the therapies (e.g., agents) to avoid or reduce the side effects of one of the therapies (e.g., agents), and/or to improve, the efficacy of the therapies.

The therapies (e.g., prophylactic or therapeutic agents) of the combination therapies of the invention can be administered to a subject concurrently.

The term “concurrently” is not limited to the administration of therapies (e.g., prophylactic or therapeutic agents) at exactly the same time, but rather it is meant that a pharmaceutical composition comprising antibodies or fragments thereof the invention are administered to a subject in a sequence and within a time interval such that the antibodies of the invention can act together with the other therapy(ies) to provide an increased benefit than if they were administered otherwise. For example, each therapy may be administered to a subject at the same time or sequentially in any order at different points in time; however, if not administered at the same time, they should be administered sufficiently close in time so as to provide the desired therapeutic or prophylactic effect. Each therapy can be administered to a subject separately, in any appropriate form and by any suitable route. In various embodiments, the therapies (e.g., prophylactic or therapeutic agents) are administered to a subject less than 15 minutes, less than 30 minutes, less than 1 hour apart, at about 1 hour apart, at about 1 hour to about 2 hours apart, at about 2 hours to about 3 hours apart, at about 3 hours to about 4 hours apart, at about 4 hours to about 5 hours apart, at about 5 hours to about 6 hours apart, at about 6 hours to about 7 hours apart, at about 7 hours to about 8 hours apart, at about 8 hours to about 9 hours apart, at about 9 hours to about 10 hours apart, at about 10 hours to about 11 hours apart, at about 11 hours to about 12 hours apart, 24 hours apart, 48 hours apart, 72 hours apart, or 1 week apart. In other embodiments, two or more therapies (e.g., prophylactic or therapeutic agents) are administered to a within the same patient visit.

The prophylactic or therapeutic agents of the combination therapies can be administered to a subject in the same pharmaceutical composition. Alternatively, the prophylactic or therapeutic agents of the combination therapies can be administered concurrently to a subject in separate pharmaceutical compositions. The prophylactic or therapeutic agents may be administered to a subject by the same or different routes of administration.

The invention having been fully described, it is further illustrated by the following examples and claims, which are illustrative and are not meant to be further limiting.

Examples

Example 1. Design of Peptide-Tagged IgG Constructs

Visual inspection of the NMR structure of the 4′-phosphopantetheinyl transferase (PPTase) Sfp (PDB ID: 2GE1, Koglin et al., (2006) Science 312: 273-276) model with a peptide substrate reveals that the reactive Ser residue of the S6 tag is inserted deeply into the enzyme active site and is positioned near the alpha phosphate of coenzyme A. The peptide substrate adopts a helix-kink-loop conformation with the Ser residue at the kink. Based on these observations, several loops on the surface of IgG antibodies were selected. The selection procedure involved the following steps. We first built a Trastuzumab homology model using human IgG1 B12 antibody (PDB ID: 1HZH, Saphire et al., (2001) Science 293: 1155-1159) as a template. Next, the loops with significant content of solvent exposed residues were selected and transformed into S6 tag loops.

To that end, different strategies were exploited: grafting of full-length peptide tag, grafting of truncated peptide tag, and insertions (both truncated and full-length). One example of the grafting of a full-length ybbR tag is exemplified by the mutant anti-hHER2-HC-S132D-K133S-S134L-T135E-S136F-G1371-G138A-T139S-A140K-A141L-L142A (SEQ ID NO:102), while the Trastuzumab anti-hHER2-HC-P189G-S190D-S191-S192L-L193S-G194W-T195L (SEQ ID NO:109) mutant constitutes grafting of a truncated S6 tag. Another variant of the grafting strategy was employed, for example, in mutant anti-hHER2-HC-S190G-S191 D-S192-L193-G194S-T195W-Q196L-T197L-RLLN-Y198 (SEQ ID NO:113) wherein residues S190 and S191 were mutated to glycine and aspartic acid, respectively, G194 to serine, T195 to tryptophan, Q196 and T197 to leucine and the truncated S6 tag RLLN was inserted between L197 and Y198. Alternatively, both truncated and full-length peptide tags were inserted into loops between antibody residues.

Through out the Example section, the peptide-tagged antibodies are named according to the immunoglobulin heavy or light chain, which contains the grafted or inserted peptide tag. For simplicity, the associated unmodified heavy or light chain is not explicitly mentioned. For example, mAb2-HC-T359-GDSLSWLLRLLN-K360 (SEQ ID NO:148) refers to an IgG1, which comprises the corresponding peptide-tagged heavy chain and the associated unmodified kappa light chain anti-hHER2-LC (SEQ ID NO:24) with X5=Ala and X6=Val. In contrast, the peptide-tagged mAb2 heavy chain constructs are associated with the unmodified lambda light chain mAb2-LC (SEQ ID NO:25). As another example, anti-hHER2-LC-S76D-S77-L78-EFIASKLA-Q79 (SEQ ID NO:30) refers to an IgG1 antibody containing a peptide-tagged light chain that is associated with the unmodified Ig gamma 1 heavy chain anti-hHER2-HC (SEQ ID NO:93) with X1=Lys, X2=Asp, X3=Leu, and X4=Ala. In cases where the peptide tag(s) is inserted or grafted into the constant region of the heavy or light chain of an antibody, only sequences of the constant region are given.

In all cases, the peptide tag was mapped on the selected loops in such a way that the reactive Ser residue was at or near the tip of the loop in order to allow a deeper fit into the active site of Sfp enzyme. The complexes between IgG and Sfp enzyme were constructed next and examined for clashes. Those with significant clashes were rejected and the corresponding loops were excluded from the selection.

To systematically insert the S6 and ybbR tag sequences into structural loops of the constant regions of Trastuzumab IgG1, insertion sites were chosen both by visual inspection of the crystal structure of the human IgG1 B12 antibody (PDB ID: 1HZH) as well as by calculating the solvent-accessible surface area of residues by using the program ICM from MolSoft LLC.

Example 2. Production of Peptide-Tagged IgG Constructs

The heavy and light chains of Trastuzumab IgG1 were transiently expressed in mammalian cells using the pOG expression vector under the control of a CMV promoter. Peptide tags for labeling with 4′-phosphopantetheinyl transferases were incorporated into Trastuzumab IgG1 at various positions by standard molecular biology methods. All primers used for cloning are listed in Table 8.

Cell culture and transfection of HEK293F cells was performed using the PEI method as described previously (see for example Erbacher et al., J Gene Med., 1: 210-222 (1999)). Briefly, HEK293F cells were co-transfected with plasmid DNA encoding the heavy and light chains of Trastuzumab (human kappa isotype). The mammalian cells were cultured in FreeStyle™ 293 Expression Medium at 37° C. under 5% CO₂, and were split to 0.7×10⁶ cells/ml one day prior to transfection. Following transfection, the HEK293F cells were cultured for five days before harvest by centrifugation at 2000×g for 30 minutes at 4° C.

The resulting medium supernatant was filtered through a 0.22-μm-pore-size filter. The filtrate was then loaded at a flow rate of about 1 mL/min on a protein A affinity column that was previously equilibrated with 20 column volumes of PBS. After washing the column with 20 column volumes of PBS, the antibody was eluted with 5 column volumes of 0.1 M sodium acetate (pH 3.0). The eluate was immediately neutralized with 10% (v/v) 1 M Tris/HCl (pH 10). Dialysis into PBS was performed using Slide-a-Lyzer dialysis cassettes with 3.5 or 7.0 kDa molecular weight cut-off (Pierce).

The purity of the final product was assessed by SDS-PAGE. Protein yields were determined by either the Bradford method or by ultraviolet spectroscopy at 280 nm using an ND-1000 UV-Vis Spectrophotometer. Protein yields of peptide-tagged Trastuzumab IgGs are listed in Table 9.

TABLE 8
DNA sequences of primers used for constructing recombinant PPTase enzymes and
mutants thereof as well as Trastuzumab IgGs with inserted/grafted peptide-tags
(HC, heavy chain; LC, light chain)
		SEQ
		ID
Sequence name	Sequence	NO
anti-hHER2-HC-A118-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCACCAAGGGCCCCAGCG	355
GDSLSWLLRLLN-S119	TCTCAGCAGCCAGCTCAGGCTGTCGCCAGCCGAGGAGACGGTGACCAG	356
anti-hHER2-HC-S119-	CTGAGCTGGCTGCTGAGACTGCTGAACACCAAGGGCCCCAGCGTGTTC	357
GDSLSWLLRLLN-T120	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTAGCCGAGGAGACGGTGAC	358
anti-hHER2-HC-T120-	CTGAGCTGGCTGCTGAGACTGCTGAACAAGGGCCCCAGCGTGTTCCC	359
GDSLSWLLRLLN-K121	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGTGCTAGCCGAGGAGACGG	360
anti-hHER2-HC-S131-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCAAGAGCACCAGCGGCGG	361
GDSLSWLLRLLN-S132	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGGGGGCCAGGGGGAAC	362
anti-hHER2-HC-S132-	CTGAGCTGGCTGCTGAGACTGCTGAACAAGAGCACCAGCGGCGGCAC	363
GDSLSWLLRLLN-K133	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGCTGGGGGCCAGGGG	364
anti-hHER2-HC-K133-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCACCAGCGGCGGCACAG	365
GDSLSWLLRLLN-S134	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTTGCTGCTGGGGGCCAGG	366
anti-hHER2-HC-S134-	CTGAGCTGGCTGCTGAGACTGCTGAACACCAGCGGCGGCACAGCC	367
GDSLSWLLRLLN-T135	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTCTTGCTGCTGGGGGCC	368
anti-hHER2-HC-T135-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCGGCGGCACAGCCGCC	369
GDSLSWLLRLLN-S136	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGTGCTCTTGCTGCTGGGGG	370
anti-hHER2-HC-S136-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCGGCACAGCCGCCCTG	371
GDSLSWLLRLLN-G137	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGGTGCTCTTGCTGCTGGG	372
anti-hHER2-HC-G137-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCACAGCCGCCCTGGGC	373
GDSLSWLLRLLN-G138	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCCGCTGGTGCTCTTGCTGC	374
anti-hHER2-HC-G138-	CTGAGCTGGCTGCTGAGACTGCTGAACACAGCCGCCCTGGGCTGC	375
GDSLSWLLRLLN-T139	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCCGCCGCTGGTGCTCTTG	376
anti-hHER2-HC-E152-	CTGAGCTGGCTGCTGAGACTGCTGAACCCCGTGACCGTGTCCTGGAAC	377
GDSLSWLLRLLN-P153	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTCGGGGAAGTAGTCCTTCACC	378
anti-hHER2-HC-P153-	CTGAGCTGGCTGCTGAGACTGCTGAACGTGACCGTGTCCTGGAACAGCG	379
GDSLSWLLRLLN-V154	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGCTCGGGGAAGTAGTCCTTC	380
anti-hHER2-HC-N159-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCGGAGCCCTGACCTCCG	381
GDSLSWLLRLLN-S160	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTTCCAGGACACGGTCACGGG	382
anti-hHER2-HC-S160-	CTGAGCTGGCTGCTGAGACTGCTGAACGGAGCCCTGACCTCCGGCGTGCAC	383
GDSLSWLLRLLN-G161	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGTTCCAGGACACGGTCACG	384
anti-hHER2-HC-G161-	CTGAGCTGGCTGCTGAGACTGCTGAACGCCCTGACCTCCGGCGTG	385
GDSLSWLLRLLN-A162	TCTCAGCAGCCAGCTCAGGCTGTCGCCTCCGCTGTTCCAGGACACGG	386
anti-hHER2-HC-A162-	CTGAGCTGGCTGCTGAGACTGCTGAACCTGACCTCCGGCGTGCACAC	387
GDSLSWLLRLLN-L163	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGCTCCGCTGTTCCAGGACAC	388
anti-hHER2-HC-L163-	CTGAGCTGGCTGCTGAGACTGCTGAACACCTCCGGCGTGCACACCTTC	389
GDSLSWLLRLLN-T164	TCTCAGCAGCCAGCTCAGGCTGTCGCCCAGGGCTCCGCTGTTCCAGG	390
anti-hHER2-HC-T164-	CTGAGCTGGCTGCTGAGACTGCTGAACTCCGGCGTGCACACCTTCCC	391
GDSLSWLLRLLN-S165	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGTCAGGGCTCCGCTGTTCC	392
anti-hHER2-HC-S165-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCGTGCACACCTTCCCCG	393
GDSLSWLLRLLN-G166	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGAGGTCAGGGCTCCGCTG	394
anti-hHER2-HC-P171-	CTGAGCTGGCTGCTGAGACTGCTGAACGCCGTGCTGCAGAGCAGCG	395
GDSLSWLLRLLN-A172	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGGAAGGTGTGCACGCCG	396
anti-hHER2-HC-S176-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCGGCCTGTACAGCCTGTCC	397
GDSLSWLLRLLN-S177	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTCTGCAGCACGGCGGG	398
anti-hHER2-HC-S177-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCCTGTACAGCCTGTCCAGC	399
GDSLSWLLRLLN-G178	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGCTCTGCAGCACGGCG	400
anti-hHER2-HC-P189-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCAGCAGCCTGGGCACCC	401
GDSLSWLLRLLN-S190	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGCACTGTCACCACGCTGG	402
anti-hHER2-HC-S190-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCAGCCTGGGCACCCAGAC	403
GDSLSWLLRLLN-S191	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGGGCACTGTCACCACGC	404
anti-hHER2-HC-S191-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCCTGGGCACCCAGACCTAC	405
GDSLSWLLRLLN-S192	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGCTGGGCACTGTCACCAC	406
anti-hHER2-HC-S192-	CTGAGCTGGCTGCTGAGACTGCTGAACCTGGGCACCCAGACCTACATC	407
GDSLSWLLRLLN-L193	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGCTGCTGGGCACTGTCAC	408
anti-hHER2-HC-L193-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCACCCAGACCTACATCTGC	409
GDSLSWLLRLLN-G194	TCTCAGCAGCCAGCTCAGGCTGTCGCCCAGGCTGCTGCTGGGCACTG	410
anti-hHER2-HC-G194-	CTGAGCTGGCTGCTGAGACTGCTGAACACCCAGACCTACATCTGCAACGTG	411
GDSLSWLLRLLN-T195	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCCCAGGCTGCTGCTGGG	412
anti-hHER2-HC-P189G-S190D-	CTGAGCTGGCTGCTGAGACTGCTGAACCAGACCTACATCTGCAACGTGAAC	413
S191-S192L-L193S-G194W-	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGTGCCCAGGCTGCTGCTG	414
T195L-LRLLN-Q196
anti-hHER2-HC-Q196-	CTGAGCTGGCTGCTGAGACTGCTGAACACCTACATCTGCAACGTGAACCAC	415
GDSLSWLLRLLN-T197	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTGGGTGCCCAGGCTGCTG	416
anti-hHER2-HC-K205-	CTGAGCTGGCTGCTGAGACTGCTGAACCCCAGCAACACCAAGGTGGAC	417
GDSLSWLLRLLN-P206	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTTGTGGTTCACGTTGCAGATGTAGG	418
anti-hHER2-HC-P206-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCAACACCAAGGTGGACAAGAAAG	419
GDSLSWLLRLLN-S207	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGCTTGTGGTTCACGTTGCAG	420
anti-hHER2-HC-S207-	CTGAGCTGGCTGCTGAGACTGCTGAACAACACCAAGGTGGACAAGAAAGTGG	421
GDSLSWLLRLLN-N208	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGGGCTTGTGGTTCACGTTG	422
anti-hHER2-HC-P230-	CTGAGCTGGCTGCTGAGACTGCTGAACGCCCCAGAGCTGCTGGGC	423
GDSLSWLLRLLN-A231	TCTCAGCAGCCAGCTCAGGCTGTCGCCTGGGCAGGGGGGGCAGGTG	424
anti-hHER2-HC-A231-	CTGAGCTGGCTGCTGAGACTGCTGAACCCAGAGCTGCTGGGCGGAC	425
GDSLSWLLRLLN-P232	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGCTGGGCAGGGGGGGC	426
anti-hHER2-HC-P232-	CTGAGCTGGCTGCTGAGACTGCTGAACGAGCTGCTGGGCGGACCC	427
GDSLSWLLRLLN-E233	TCTCAGCAGCCAGCTCAGGCTGTCGCCTGGGGCTGGGCAGGGGGG	428
anti-hHER2-HC-E233-	CTGAGCTGGCTGCTGAGACTGCTGAACCTGCTGGGCGGACCCTCC	429
GDSLSWLLRLLN-L234	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTCTGGGGCTGGGCAGGG	430
anti-hHER2-HC-L234-	CTGAGCTGGCTGCTGAGACTGCTGAACCTGGGCGGACCCTCCGTG	431
GDSLSWLLRLLN-L235	TCTCAGCAGCCAGCTCAGGCTGTCGCCCAGCTCTGGGGCTGGGCAG	432
anti-hHER2-HC-L235-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCGGACCCTCCGTGTTCC	433
GDSLSWLLRLLN-G236	TCTCAGCAGCCAGCTCAGGCTGTCGCCCAGCAGCTCTGGGGCTGGG	434
anti-hHER2-HC-G236-	CTGAGCTGGCTGCTGAGACTGCTGAACGGACCCTCCGTGTTCCTGTTCC	435
GDSLSWLLRLLN-G237	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCCCAGCAGCTCTGGGGC	436
anti-hHER2-HC-P244-	CTGAGCTGGCTGCTGAGACTGCTGAACCCCAAGCCCAAGGACACCCTG	437
GDSLSWLLRLLN-P245	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGGAACAGGAACACGGAGGG	438
anti-hHER2-HC-P245-	CTGAGCTGGCTGCTGAGACTGCTGAACAAGCCCAAGGACACCCTGATGATC	439
GDSLSWLLRLLN-K246	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGGGGGAACAGGAACACGG	440
anti-hHER2-HC-I253-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCAGGACCCCCGAGGTGAC	441
GDSLSWLLRLLN-S254	TCTCAGCAGCCAGCTCAGGCTGTCGCCGATCATCAGGGTGTCCTTGGGC	442
anti-hHER2-HC-S254-	CTGAGCTGGCTGCTGAGACTGCTGAACAGGACCCCCGAGGTGACCTG	443
GDSLSWLLRLLN-R255	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGATCATCAGGGTGTCCTTGG	444
anti-hHER2-HC-R255-	CTGAGCTGGCTGCTGAGACTGCTGAACACCCCCGAGGTGACCTGCG	445
GDSLSWLLRLLN-T256	TCTCAGCAGCCAGCTCAGGCTGTCGCCCCTGCTGATCATCAGGGTGTCC	446
anti-hHER2-HC-T256-	CTGAGCTGGCTGCTGAGACTGCTGAACCCCGAGGTGACCTGCGTGG	447
GDSLSWLLRLLN-P257	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGTCCTGCTGATCATCAGGGTG	448
anti-hHER2-HC-P257-	CTGAGCTGGCTGCTGAGACTGCTGAACGAGGTGACCTGCGTGGTGGTG	449
GDSLSWLLRLLN-E258	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGGGTCCTGCTGATCATCAG	450
anti-hHER2-HC-S267-	CTGAGCTGGCTGCTGAGACTGCTGAACCACGAGGACCCAGAGGTGAAGTTC	451
GDSLSWLLRLLN-H268	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTCACGTCCACCACCACGC	452
anti-hHER2-HC-H268-	CTGAGCTGGCTGCTGAGACTGCTGAACGAGGACCCAGAGGTGAAGTTCAAC	453
GDSLSWLLRLLN-E269	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTGGCTCACGTCCACCACCAC	454
anti-hHER2-HC-E269-	CTGAGCTGGCTGCTGAGACTGCTGAACGACCCAGAGGTGAAGTTCAACTGG	455
GDSLSWLLRLLN-D270	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTCGTGGCTCACGTCCACCAC	456
anti-hHER2-HC-D270-	CTGAGCTGGCTGCTGAGACTGCTGAACCCAGAGGTGAAGTTCAACTGGTAC	457
GDSLSWLLRLLN-P271	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTCCTCGTGGCTCACGTCCAC	458
anti-hHER2-HC-P271-	CTGAGCTGGCTGCTGAGACTGCTGAACGAGGTGAAGTTCAACTGGTACGTGG	459
GDSLSWLLRLLN-E272	TCTCAGCAGCCAGCTCAGGCTGTCGCCTGGGTCCTCGTGGCTCACGTC	460
anti-hHER2-HC-D280-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCGTGGAGGTGCACAACGC	461
GDSLSWLLRLLN-G281	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTCCACGTACCAGTTGAACTTCACC	462
anti-hHER2-HC-H285-	CTGAGCTGGCTGCTGAGACTGCTGAACAACGCCAAGACCAAGCCCAGAG	463
GDSLSWLLRLLN-N286	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTGCACCTCCACGCCGTCC	464
anti-hHER2-HC-N286-	CTGAGCTGGCTGCTGAGACTGCTGAACGCCAAGACCAAGCCCAGAGAG	465
GDSLSWLLRLLN-A287	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTTGTGCACCTCCACGCCGTC	466
anti-hHER2-HC-P291-	CTGAGCTGGCTGCTGAGACTGCTGAACAGAGAGGAGCAGTACAACAGCACC	467
GDSLSWLLRLLN-R292	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGCTTGGTCTTGGCGTTGTG	468
anti-hHER2-HC-T307-	CTGAGCTGGCTGCTGAGACTGCTGAACGTGCTGCACCAGGACTGGCTG	469
GDSLSWLLRLLN-V308	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGTCAGCACGGACACCACCC	470
anti-hHER2-HC-V308-	CTGAGCTGGCTGCTGAGACTGCTGAACCTGCACCAGGACTGGCTGAAC	471
GDSLSWLLRLLN-L309	TCTCAGCAGCCAGCTCAGGCTGTCGCCCACGGTCAGCACGGACACCAC	472
anti-hHER2-HC-L309-	CTGAGCTGGCTGCTGAGACTGCTGAACCACCAGGACTGGCTGAACGGC	473
GDSLSWLLRLLN-H310	TCTCAGCAGCCAGCTCAGGCTGTCGCCCAGCACGGTCAGCACGGACAC	474
anti-hHER2-HC-H310-	CTGAGCTGGCTGCTGAGACTGCTGAACCAGGACTGGCTGAACGGCAAG	475
GDSLSWLLRLLN-Q311	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTGCAGCACGGTCAGCACGG	476
anti-hHER2-HC-N315-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCAAGGAATACAAGTGCAAGGTC	477
GDSLSWLLRLLN-G316	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTTCAGCCAGTCCTGGTGCAG	478
anti-hHER2-HC-G316-	CTGAGCTGGCTGCTGAGACTGCTGAACAAGGAATACAAGTGCAAGGTCTCCAAC	479
GDSLSWLLRLLN-K317	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCCGTTCAGCCAGTCCTGGTG	480
anti-hHER2-HC-K317-	CTGAGCTGGCTGCTGAGACTGCTGAACGAATACAAGTGCAAGGTCTCCAACAAG	481
GDSLSWLLRLLN-E318	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTTGCCGTTCAGCCAGTCCTG	482
anti-hHER2-HC-K326-	CTGAGCTGGCTGCTGAGACTGCTGAACGCCCTGCCAGCCCCCATC	483
GDSLSWLLRLLN-A327	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTTGTTGGAGACCTTGCACTTGTATTC	484
anti-hHER2-HC-A327-	CTGAGCTGGCTGCTGAGACTGCTGAACCTGCCAGCCCCCATCGAAAAG	485
GDSLSWLLRLLN-L328	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGCCTTGTTGGAGACCTTGCAC	486
anti-hHER2-HC-L328-	CTGAGCTGGCTGCTGAGACTGCTGAACCCAGCCCCCATCGAAAAGACC	487
GDSLSWLLRLLN-P329	TCTCAGCAGCCAGCTCAGGCTGTCGCCCAGGGCCTTGTTGGAGACCTTG	488
anti-hHER2-HC-P329-	CTGAGCTGGCTGCTGAGACTGCTGAACGCCCCCATCGAAAAGACCATCAG	489
GDSLSWLLRLLN-A330	TCTCAGCAGCCAGCTCAGGCTGTCGCCTGGCAGGGCCTTGTTGGAGAC	490
anti-hHER2-HC-A330-	CTGAGCTGGCTGCTGAGACTGCTGAACCCCATCGAAAAGACCATCAGCAAG	491
GDSLSWLLRLLN-P331	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGCTGGCAGGGCCTTGTTGG	492
anti-hHER2-HC-A339-	CTGAGCTGGCTGCTGAGACTGCTGAACAAGGGCCAGCCACGGGAGC	493
GDSLSWLLRLLN-K340	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGCCTTGCTGATGGTCTTTTCGATG	494
anti-hHER2-HC-K340-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCCAGCCACGGGAGCCC	495
GDSLSWLLRLLN-G341	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTTGGCCTTGCTGATGGTCTTTTC	496
anti-hHER2-HC-G341-	CTGAGCTGGCTGCTGAGACTGCTGAACCAGCCACGGGAGCCCCAG	497
GDSLSWLLRLLN-Q342	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCCCTTGGCCTTGCTGATGGTC	498
anti-hHER2-HC-Q342-	CTGAGCTGGCTGCTGAGACTGCTGAACCCACGGGAGCCCCAGGTG	499
GDSLSWLLRLLN-P343	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTGGCCCTTGGCCTTGCTGATG	500
anti-hHER2-HC-P343-	CTGAGCTGGCTGCTGAGACTGCTGAACCGGGAGCCCCAGGTGTACAC	501
GDSLSWLLRLLN-R344	TCTCAGCAGCCAGCTCAGGCTGTCGCCTGGCTGGCCCTTGGCCTTGC	502
anti-hHER2-HC-R344-	CTGAGCTGGCTGCTGAGACTGCTGAACGAGCCCCAGGTGTACACCCTG	503
GDSLSWLLRLLN-E345	TCTCAGCAGCCAGCTCAGGCTGTCGCCCCGTGGCTGGCCCTTGGC	504
anti-hHER2-HC-R355-	CTGAGCTGGCTGCTGAGACTGCTGAACGAGGAGATGACCAAGAACCAGGTG	505
GDSLSWLLRLLN-E356	TCTCAGCAGCCAGCTCAGGCTGTCGCCCCGGGAGGGGGGCAGGG	506
anti-hHER2-HC-E356-	CTGAGCTGGCTGCTGAGACTGCTGAACGAGATGACCAAGAACCAGGTGTCC	507
GDSLSWLLRLLN-E357	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTCCCGGGAGGGGGGCAG	508
anti-hHER2-HC-E357-	CTGAGCTGGCTGCTGAGACTGCTGAACATGACCAAGAACCAGGTGTCCCTG	509
GDSLSWLLRLLN-M358	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTCCTCCCGGGAGGGGGG	510
anti-hHER2-HC-M358-	CTGAGCTGGCTGCTGAGACTGCTGAACACCAAGAACCAGGTGTCCCTGAC	511
GDSLSWLLRLLN-T359	TCTCAGCAGCCAGCTCAGGCTGTCGCCCATCTCCTCCCGGGAGGGG	512
anti-hHER2-HC-T359-	CTGAGCTGGCTGCTGAGACTGCTGAACAAGAACCAGGTGTCCCTGACCTG	513
GDSLSWLLRLLN-K360	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGTCATCTCCTCCCGGGAGG	514
anti-hHER2-HC-K360-	CTGAGCTGGCTGCTGAGACTGCTGAACAACCAGGTGTCCCTGACCTGTC	515
GDSLSWLLRLLN-N361	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTTGGTCATCTCCTCCCGGGAG	516
anti-hHER2-HC-N384-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCCAGCCCGAGAACAACTAC	517
GDSLSWLLRLLN-G385	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTTGCTCTCCCACTCCACGGC	518
anti-hHER2-HC-E388-	CTGAGCTGGCTGCTGAGACTGCTGAACAACAACTACAAGACCACACCTCCAG	519
GDSLSWLLRLLN-N389	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTCGGGCTGGCCGTTGCTC	520
anti-hHER2-HC-N389-	CTGAGCTGGCTGCTGAGACTGCTGAACAACTACAAGACCACACCTCCAGTGC	521
GDSLSWLLRLLN-N390	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTTCTCGGGCTGGCCGTTGC	522
anti-hHER2-HC-T394-	CTGAGCTGGCTGCTGAGACTGCTGAACCCTCCAGTGCTGGACAGCGAC	523
GDSLSWLLRLLN-P395	TCTCAGCAGCCAGCTCAGGCTGTCGCCTGTGGTCTTGTAGTTGTTCTCGGGC	524
anti-hHER2-HC-P395-	CTGAGCTGGCTGCTGAGACTGCTGAACCCAGTGCTGGACAGCGACGG	525
GDSLSWLLRLLN-P396	TCTCAGCAGCCAGCTCAGGCTGTCGCCAGGTGTGGTCTTGTAGTTGTTCTCG	526
anti-hHER2-HC-D399-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCGACGGCAGCTTCTTCCTG	527
GDSLSWLLRLLN-S400	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTCCAGCACTGGAGGTGTGGTC	528
anti-hHER2-HC-S400-	CTGAGCTGGCTGCTGAGACTGCTGAACGACGGCAGCTTCTTCCTGTACAG	529
GDSLSWLLRLLN-D401	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGTCCAGCACTGGAGGTGTG	530
anti-hHER2-HC-D401-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCAGCTTCTTCCTGTACAGCAAG	531
GDSLSWLLRLLN-G402	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTCGCTGTCCAGCACTGGAGG	532
anti-hHER2-HC-S415-	CTGAGCTGGCTGCTGAGACTGCTGAACAGGTGGCAGCAGGGCAACGTG	533
GDSLSWLLRLLN-R416	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGACTTGTCCACGGTCAGCTTG	534
anti-hHER2-HC-R416-	CTGAGCTGGCTGCTGAGACTGCTGAACTGGCAGCAGGGCAACGTGTTC	535
GDSLSWLLRLLN-W417	TCTCAGCAGCCAGCTCAGGCTGTCGCCCCTGGACTTGTCCACGGTCAG	536
anti-hHER2-HC-W417-	CTGAGCTGGCTGCTGAGACTGCTGAACCAGCAGGGCAACGTGTTCAGC	537
GDSLSWLLRLLN-Q418	TCTCAGCAGCCAGCTCAGGCTGTCGCCCCACCTGGACTTGTCCACGGTC	538
anti-hHER2-HC-Q418-	CTGAGCTGGCTGCTGAGACTGCTGAACCAGGGCAACGTGTTCAGCTGC	539
GDSLSWLLRLLN-Q419	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTGCCACCTGGACTTGTCCAC	540
anti-hHER2-HC-Q419-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCAACGTGTTCAGCTGCAGC	541
GDSLSWLLRLLN-G420	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTGCTGCCACCTGGACTTGTC	542
anti-hHER2-HC-G420-	CTGAGCTGGCTGCTGAGACTGCTGAACAACGTGTTCAGCTGCAGCGTGATG	543
GDSLSWLLRLLN-N421	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCCCTGCTGCCACCTGGAC	544
anti-hHER2-HC-N421-	CTGAGCTGGCTGCTGAGACTGCTGAACGTGTTCAGCTGCAGCGTGATGC	545
GDSLSWLLRLLN-V422	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTTGCCCTGCTGCCACCTGG	546
anti-hHER2-HC-H433-	CTGAGCTGGCTGCTGAGACTGCTGAACAACCACTACACCCAGAAGAGCCTG	547
GDSLSWLLRLLN-N434	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTGCAGGGCCTCGTGCATCAC	548
anti-hHER2-HC-N434-	CTGAGCTGGCTGCTGAGACTGCTGAACCACTACACCCAGAAGAGCCTGAG	549
GDSLSWLLRLLN-H435	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTTGTGCAGGGCCTCGTGCATC	550
anti-hHER2-HC-S442-	CTGAGCTGGCTGCTGAGACTGCTGAACCTGTCCCCCGGCAAGTAATCTAG	551
GDSLSWLLRLLN-L443	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTCAGGCTCTTCTGGGTGTAG	552
anti-hHER2-HC-L443-	CTGAGCTGGCTGCTGAGACTGCTGAACTCCCCCGGCAAGTAATCTAGACAC	553
GDSLSWLLRLLN-S444	TCTCAGCAGCCAGCTCAGGCTGTCGCCCAGGCTCAGGCTCTTCTGGGTG	554
anti-hHER2-HC-S444-	CTGAGCTGGCTGCTGAGACTGCTGAACCCCGGCAAGTAATCTAGACACCTC	555
GDSLSWLLRLLN-P445	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGACAGGCTCAGGCTCTTCTG	556
anti-hHER2-HC-P445-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCAAGTAATCTAGACACCTCAGAC	557
GDSLSWLLRLLN-G446	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGGGACAGGCTCAGGCTC	558
anti-hHER2-HC-G446-	CTGAGCTGGCTGCTGAGACTGCTGAACAAGTAATCTAGACACCTCAGACAATCAA	559
GDSLSWLLRLLN-K447	C
	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCCGGGGGACAGGCTCAG	560
anti-hHER2-HC-A118-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCACCAAGGGCCCCAGCG	561
DSLEFIASKLA-S119	CTTGCTGGCGATGAACTCCAGGCTGTCAGCCGAGGAGACGGTGACCAG	562
anti-hHER2-HC-S119-	CTGGAGTTCATCGCCAGCAAGCTGGCCACCAAGGGCCCCAGCGTGTTC	563
DSLEFIASKLA-T120	CTTGCTGGCGATGAACTCCAGGCTGTCGCTAGCCGAGGAGACGGTGAC	564
anti-hHER2-HC-T120-	CTGGAGTTCATCGCCAGCAAGCTGGCCAAGGGCCCCAGCGTGTTCCC	565
DSLEFIASKLA-K121	CTTGCTGGCGATGAACTCCAGGCTGTCGGTGCTAGCCGAGGAGACGG	566
anti-hHER2-HC-S131-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCAAGAGCACCAGCGGCGG	567
DSLEFIASKLA-S132	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGGGGGCCAGGGGGAAC	568
anti-hHER2-HC-S132-	CTGGAGTTCATCGCCAGCAAGCTGGCCAAGAGCACCAGCGGCGGCAC	569
DSLEFIASKLA-K133	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGCTGGGGGCCAGGGG	570
anti-hHER2-HC-K133-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCACCAGCGGCGGCACAG	571
DSLEFIASKLA-S134	CTTGCTGGCGATGAACTCCAGGCTGTCCTTGCTGCTGGGGGCCAGG	572
anti-hHER2-HC-S134-	CTGGAGTTCATCGCCAGCAAGCTGGCCACCAGCGGCGGCACAGCC	573
DSLEFIASKLA-T135	CTTGCTGGCGATGAACTCCAGGCTGTCGCTCTTGCTGCTGGGGGCC	574
anti-hHER2-HC-T135-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCGGCGGCACAGCCGCC	575
DSLEFIASKLA-S136	CTTGCTGGCGATGAACTCCAGGCTGTCGGTGCTCTTGCTGCTGGGGG	576
anti-hHER2-HC-S136-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCGGCACAGCCGCCCTG	577
DSLEFIASKLA-137	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGGTGCTCTTGCTGCTGGG	578
anti-hHER2-HC-G137-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCACAGCCGCCCTGGGC	579
DSLEFIASKLA-G138	CTTGCTGGCGATGAACTCCAGGCTGTCGCCGCTGGTGCTCTTGCTGC	580
anti-hHER2-HC-G138-	CTGGAGTTCATCGCCAGCAAGCTGGCCACAGCCGCCCTGGGCTGC	581
DSLEFIASKLA-T139	CTTGCTGGCGATGAACTCCAGGCTGTCGCCGCCGCTGGTGCTCTTG	582
anti-hHER2-HC-E152-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCCGTGACCGTGTCCTGGAAC	583
DSLEFIASKLA-P153	CTTGCTGGCGATGAACTCCAGGCTGTCCTCGGGGAAGTAGTCCTTCACC	584
anti-hHER2-HC-P153-	CTGGAGTTCATCGCCAGCAAGCTGGCCGTGACCGTGTCCTGGAACAGCG	585
DSLEFIASKLA-V154	CTTGCTGGCGATGAACTCCAGGCTGTCGGGCTCGGGGAAGTAGTCCTTC	586
anti-hHER2-HC-N159-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCGGAGCCCTGACCTCCG	587
DSLEFIASKLA-S160	CTTGCTGGCGATGAACTCCAGGCTGTCGTTCCAGGACACGGTCACGGG	588
anti-hHER2-HC-S160-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGAGCCCTGACCTCCGGCGTGCAC	589
DSLEFIASKLA-G161	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGTTCCAGGACACGGTCACG	590
anti-hHER2-HC-G161-	CTGGAGTTCATCGCCAGCAAGCTGGCCGCCCTGACCTCCGGCGTG	591
DSLEFIASKLA-A162	CTTGCTGGCGATGAACTCCAGGCTGTCTCCGCTGTTCCAGGACACGG	592
anti-hHER2-HC-A162-	CTGGAGTTCATCGCCAGCAAGCTGGCCCTGACCTCCGGCGTGCACAC	593
DSLEFIASKLA-L163	CTTGCTGGCGATGAACTCCAGGCTGTCGGCTCCGCTGTTCCAGGACAC	594
anti-hHER2-HC-L163-	CTGGAGTTCATCGCCAGCAAGCTGGCCACCTCCGGCGTGCACACCTTC	595
DSLEFIASKLA-T164	CTTGCTGGCGATGAACTCCAGGCTGTCCAGGGCTCCGCTGTTCCAGG	596
anti-hHER2-HC-T164-	CTGGAGTTCATCGCCAGCAAGCTGGCCTCCGGCGTGCACACCTTCCC	597
DSLEFIASKLA-S165	CTTGCTGGCGATGAACTCCAGGCTGTCGGTCAGGGCTCCGCTGTTCC	598
anti-hHER2-HC-S165-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCGTGCACACCTTCCCCG	599
DSLEFIASKLA-G166	CTTGCTGGCGATGAACTCCAGGCTGTCGGAGGTCAGGGCTCCGCTG	600
anti-hHER2-HC-P171-	CTGGAGTTCATCGCCAGCAAGCTGGCCGCCGTGCTGCAGAGCAGCG	601
DSLEFIASKLA-A172	CTTGCTGGCGATGAACTCCAGGCTGTCGGGGAAGGTGTGCACGCCG	602
anti-hHER2-HC-S176-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCGGCCTGTACAGCCTGTCC	603
DSLEFIASKLA-S177	CTTGCTGGCGATGAACTCCAGGCTGTCGCTCTGCAGCACGGCGGG	604
anti-hHER2-HC-S177-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCCTGTACAGCCTGTCCAGC	605
DSLEFIASKLA-G178	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGCTCTGCAGCACGGCG	606
anti-hHER2-HC-P189-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCAGCAGCCTGGGCACCC	607
DSLEFIASKLA-S190	CTTGCTGGCGATGAACTCCAGGCTGTCGGGCACTGTCACCACGCTGG	608
anti-hHER2-HC-S190-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCAGCCTGGGCACCCAGAC	609
DSLEFIASKLA-S191	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGGGCACTGTCACCACGC	610
anti-hHER2-HC-S191-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCCTGGGCACCCAGACCTAC	611
DSLEFIASKLA-S192	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGCTGGGCACTGTCACCAC	612
anti-hHER2-HC-S192-	CTGGAGTTCATCGCCAGCAAGCTGGCCCTGGGCACCCAGACCTACATC	613
DSLEFIASKLA-L193	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGCTGCTGGGCACTGTCAC	614
anti-hHER2-HC-L193-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCACCCAGACCTACATCTGC	615
DSLEFIASKLA-G194	CTTGCTGGCGATGAACTCCAGGCTGTCCAGGCTGCTGCTGGGCACTG	616
anti-hHER2-HC-G194-	CTGGAGTTCATCGCCAGCAAGCTGGCCACCCAGACCTACATCTGCAACGTG	617
DSLEFIASKLA-T195	CTTGCTGGCGATGAACTCCAGGCTGTCGCCCAGGCTGCTGCTGGG	618
anti-hHER2-HC-T195-	CTGGAGTTCATCGCCAGCAAGCTGGCCCAGACCTACATCTGCAACGTGAAC	619
DSLEFIASKLA-Q196	CTTGCTGGCGATGAACTCCAGGCTGTCGGTGCCCAGGCTGCTGCTG	620
anti-hHER2-HC-Q196-	CTGGAGTTCATCGCCAGCAAGCTGGCCACCTACATCTGCAACGTGAACCAC	621
DSLEFIASKLA-T197	CTTGCTGGCGATGAACTCCAGGCTGTCCTGGGTGCCCAGGCTGCTG	622
anti-hHER2-HC-K205-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCCAGCAACACCAAGGTGGAC	623
DSLEFIASKLA-P206	CTTGCTGGCGATGAACTCCAGGCTGTCCTTGTGGTTCACGTTGCAGATGTAGG	624
anti-hHER2-HC-P206-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCAACACCAAGGTGGACAAGAAAG	625
DSLEFIASKLA-S207	CTTGCTGGCGATGAACTCCAGGCTGTCGGGCTTGTGGTTCACGTTGCAG	626
anti-hHER2-HC-S207-	CTGGAGTTCATCGCCAGCAAGCTGGCCAACACCAAGGTGGACAAGAAAGTGG	627
DSLEFIASKLA-N208	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGGGCTTGTGGTTCACGTTG	628
anti-hHER2-HC-P230-	CTGGAGTTCATCGCCAGCAAGCTGGCCGCCCCAGAGCTGCTGGGC	629
DSLEFIASKLA-A231	CTTGCTGGCGATGAACTCCAGGCTGTCTGGGCAGGGGGGGCAGGTG	630
anti-hHER2-HC-A231-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCAGAGCTGCTGGGCGGAC	631
DSLEFIASKLA-P232	CTTGCTGGCGATGAACTCCAGGCTGTCGGCTGGGCAGGGGGGGC	632
anti-hHER2-HC-P232-	CTGGAGTTCATCGCCAGCAAGCTGGCCGAGCTGCTGGGCGGACCC	633
DSLEFIASKLA-E233	CTTGCTGGCGATGAACTCCAGGCTGTCTGGGGCTGGGCAGGGGGG	634
anti-hHER2-HC-E233-	CTGGAGTTCATCGCCAGCAAGCTGGCCCTGCTGGGCGGACCCTCC	635
DSLEFIASKLA-L234	CTTGCTGGCGATGAACTCCAGGCTGTCCTCTGGGGCTGGGCAGGG	636
anti-hHER2-HC-L234-	CTGGAGTTCATCGCCAGCAAGCTGGCCCTGGGCGGACCCTCCGTG	637
DSLEFIASKLA-L235	CTTGCTGGCGATGAACTCCAGGCTGTCCAGCTCTGGGGCTGGGCAG	638
anti-hHER2-HC-L235-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCGGACCCTCCGTGTTCC	639
DSLEFIASKLA-G236	CTTGCTGGCGATGAACTCCAGGCTGTCCAGCAGCTCTGGGGCTGGG	640
anti-hHER2-HC-G236-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGACCCTCCGTGTTCCTGTTCC	641
DSLEFIASKLA-G237	CTTGCTGGCGATGAACTCCAGGCTGTCGCCCAGCAGCTCTGGGGC	642
anti-hHER2-HC-P244-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCCAAGCCCAAGGACACCCTG	643
DSLEFIASKLA-P245	CTTGCTGGCGATGAACTCCAGGCTGTCGGGGAACAGGAACACGGAGGG	644
anti-hHER2-HC-P245-	CTGGAGTTCATCGCCAGCAAGCTGGCCAAGCCCAAGGACACCCTGATGATC	645
DSLEFIASKLA-K246	CTTGCTGGCGATGAACTCCAGGCTGTCGGGGGGGAACAGGAACACGG	646
anti-hHER2-HC-I253-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCAGGACCCCCGAGGTGAC	647
DSLEFIASKLA-S254	CTTGCTGGCGATGAACTCCAGGCTGTCGATCATCAGGGTGTCCTTGGGC	648
anti-hHER2-HC-S254-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGGACCCCCGAGGTGACCTG	649
DSLEFIASKLA-R255	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGATCATCAGGGTGTCCTTGG	650
anti-hHER2-HC-R255-	CTGGAGTTCATCGCCAGCAAGCTGGCCACCCCCGAGGTGACCTGCG	651
DSLEFIASKLA-T256	CTTGCTGGCGATGAACTCCAGGCTGTCCCTGCTGATCATCAGGGTGTCC	652
anti-hHER2-HC-T256-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCCGAGGTGACCTGCGTGG	653
DSLEFIASKLA-P257	CTTGCTGGCGATGAACTCCAGGCTGTCGGTCCTGCTGATCATCAGGGTG	654
anti-hHER2-HC-P257-	CTGGAGTTCATCGCCAGCAAGCTGGCCGAGGTGACCTGCGTGGTGGTG	655
DSLEFIASKLA-E258	CTTGCTGGCGATGAACTCCAGGCTGTCGGGGGTCCTGCTGATCATCAG	656
anti-hHER2-HC-S267-	CTGGAGTTCATCGCCAGCAAGCTGGCCCACGAGGACCCAGAGGTGAAGTTC	657
DSLEFIASKLA-H268	CTTGCTGGCGATGAACTCCAGGCTGTCGCTCACGTCCACCACCACGC	658
anti-hHER2-HC-H268-	CTGGAGTTCATCGCCAGCAAGCTGGCCGAGGACCCAGAGGTGAAGTTCAAC	659
DSLEFIASKLA-E269	CTTGCTGGCGATGAACTCCAGGCTGTCGTGGCTCACGTCCACCACCAC	660
anti-hHER2-HC-E269-	CTGGAGTTCATCGCCAGCAAGCTGGCCGACCCAGAGGTGAAGTTCAACTGG	661
DSLEFIASKLA-D270	CTTGCTGGCGATGAACTCCAGGCTGTCCTCGTGGCTCACGTCCACCAC	662
anti-hHER2-HC-D270-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCAGAGGTGAAGTTCAACTGGTAC	663
DSLEFIASKLA-P271	CTTGCTGGCGATGAACTCCAGGCTGTCGTCCTCGTGGCTCACGTCCAC	664
anti-hHER2-HC-P271-	CTGGAGTTCATCGCCAGCAAGCTGGCCGAGGTGAAGTTCAACTGGTACGTGG	665
DSLEFIASKLA-E272	CTTGCTGGCGATGAACTCCAGGCTGTCTGGGTCCTCGTGGCTCACGTC	666
anti-hHER2-HC-D280-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCGTGGAGGTGCACAACGC	667
DSLEFIASKLA-G281	CTTGCTGGCGATGAACTCCAGGCTGTCGTCCACGTACCAGTTGAACTTCACC	668
anti-hHER2-HC-H285-	CTGGAGTTCATCGCCAGCAAGCTGGCCAACGCCAAGACCAAGCCCAGAG	669
DSLEFIASKLA-N286	CTTGCTGGCGATGAACTCCAGGCTGTCGTGCACCTCCACGCCGTCC	670
anti-hHER2-HC-N286-	CTGGAGTTCATCGCCAGCAAGCTGGCCGCCAAGACCAAGCCCAGAGAG	671
DSLEFIASKLA-A287	CTTGCTGGCGATGAACTCCAGGCTGTCGTTGTGCACCTCCACGCCGTC	672
anti-hHER2-HC-P291-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGAGAGGAGCAGTACAACAGCACC	673
DSLEFIASKLA-R292	CTTGCTGGCGATGAACTCCAGGCTGTCGGGCTTGGTCTTGGCGTTGTG	674
anti-hHER2-HC-T307-	CTGGAGTTCATCGCCAGCAAGCTGGCCGTGCTGCACCAGGACTGGCTG	675
DSLEFIASKLA-V308	CTTGCTGGCGATGAACTCCAGGCTGTCGGTCAGCACGGACACCACCC	676
anti-hHER2-HC-V308-	CTGGAGTTCATCGCCAGCAAGCTGGCCCTGCACCAGGACTGGCTGAAC	677
DSLEFIASKLA-L309	CTTGCTGGCGATGAACTCCAGGCTGTCCACGGTCAGCACGGACACCAC	678
anti-hHER2-HC-L309-	CTGGAGTTCATCGCCAGCAAGCTGGCCCACCAGGACTGGCTGAACGGC	679
DSLEFIASKLA-H310	CTTGCTGGCGATGAACTCCAGGCTGTCCAGCACGGTCAGCACGGACAC	680
anti-hHER2-HC-H310-	CTGGAGTTCATCGCCAGCAAGCTGGCCCAGGACTGGCTGAACGGCAAG	681
DSLEFIASKLA-Q311	CTTGCTGGCGATGAACTCCAGGCTGTCGTGCAGCACGGTCAGCACGG	682
anti-hHER2-HC-N315-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCAAGGAATACAAGTGCAAGGTC	683
DSLEFIASKLA-G316	CTTGCTGGCGATGAACTCCAGGCTGTCGTTCAGCCAGTCCTGGTGCAG	684
anti-hHER2-HC-G316-	CTGGAGTTCATCGCCAGCAAGCTGGCCAAGGAATACAAGTGCAAGGTCTCCAAC	685
DSLEFIASKLA-K317	CTTGCTGGCGATGAACTCCAGGCTGTCGCCGTTCAGCCAGTCCTGGTG	686
anti-hHER2-HC-K317-	CTGGAGTTCATCGCCAGCAAGCTGGCCGAATACAAGTGCAAGGTCTCCAACAAG	687
DSLEFIASKLA-E318	CTTGCTGGCGATGAACTCCAGGCTGTCCTTGCCGTTCAGCCAGTCCTG	688
anti-hHER2-HC-K326-	CTGGAGTTCATCGCCAGCAAGCTGGCCGCCCTGCCAGCCCCCATC	689
DSLEFIASKLA-A327	CTTGCTGGCGATGAACTCCAGGCTGTCCTTGTTGGAGACCTTGCACTTGTATTC	690
anti-hHER2-HC-A327-	CTGGAGTTCATCGCCAGCAAGCTGGCCCTGCCAGCCCCCATCGAAAAG	691
DSLEFIASKLA-L328	CTTGCTGGCGATGAACTCCAGGCTGTCGGCCTTGTTGGAGACCTTGCAC	692
anti-hHER2-HC-L328-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCAGCCCCCATCGAAAAGACC	693
DSLEFIASKLA-P329	CTTGCTGGCGATGAACTCCAGGCTGTCCAGGGCCTTGTTGGAGACCTTG	694
anti-hHER2-HC-P329-	CTGGAGTTCATCGCCAGCAAGCTGGCCGCCCCCATCGAAAAGACCATCAG	695
DSLEFIASKLA-A330	CTTGCTGGCGATGAACTCCAGGCTGTCTGGCAGGGCCTTGTTGGAGAC	696
anti-hHER2-HC-A330-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCCATCGAAAAGACCATCAGCAAG	697
DSLEFIASKLA-P331	CTTGCTGGCGATGAACTCCAGGCTGTCGGCTGGCAGGGCCTTGTTGG	698
anti-hHER2-HC-A339-	CTGGAGTTCATCGCCAGCAAGCTGGCCAAGGGCCAGCCACGGGAGC	699
DSLEFIASKLA-K340	CTTGCTGGCGATGAACTCCAGGCTGTCGGCCTTGCTGATGGTCTTTTCGATG	700
anti-hHER2-HC-K340-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCCAGCCACGGGAGCCC	701
DSLEFIASKLA-G341	CTTGCTGGCGATGAACTCCAGGCTGTCCTTGGCCTTGCTGATGGTCTTTTC	702
anti-hHER2-HC-G341-	CTGGAGTTCATCGCCAGCAAGCTGGCCCAGCCACGGGAGCCCCAG	703
DSLEFIASKLA-Q342	CTTGCTGGCGATGAACTCCAGGCTGTCGCCCTTGGCCTTGCTGATGGTC	704
anti-hHER2-HC-Q342-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCACGGGAGCCCCAGGTG	705
DSLEFIASKLA-P343	CTTGCTGGCGATGAACTCCAGGCTGTCCTGGCCCTTGGCCTTGCTGATG	706
anti-hHER2-HC-P343-	CTGGAGTTCATCGCCAGCAAGCTGGCCCGGGAGCCCCAGGTGTACAC	707
DSLEFIASKLA-R344	CTTGCTGGCGATGAACTCCAGGCTGTCTGGCTGGCCCTTGGCCTTGC	708
anti-hHER2-HC-R344-	CTGGAGTTCATCGCCAGCAAGCTGGCCGAGCCCCAGGTGTACACCCTG	709
DSLEFIASKLA-E345	CTTGCTGGCGATGAACTCCAGGCTGTCCCGTGGCTGGCCCTTGGC	710
anti-hHER2-HC-R355-	CTGGAGTTCATCGCCAGCAAGCTGGCCGAGGAGATGACCAAGAACCAGGTG	711
DSLEFIASKLA-E356	CTTGCTGGCGATGAACTCCAGGCTGTCCCGGGAGGGGGGCAGGG	712
anti-hHER2-HC-E356-	CTGGAGTTCATCGCCAGCAAGCTGGCCGAGATGACCAAGAACCAGGTGTCC	713
DSLEFIASKLA-E357	CTTGCTGGCGATGAACTCCAGGCTGTCCTCCCGGGAGGGGGGCAG	714
anti-hHER2-HC-E357-	CTGGAGTTCATCGCCAGCAAGCTGGCCATGACCAAGAACCAGGTGTCCCTG	715
DSLEFIASKLA-M358	CTTGCTGGCGATGAACTCCAGGCTGTCCTCCTCCCGGGAGGGGGG	716
anti-hHER2-HC-M358-	CTGGAGTTCATCGCCAGCAAGCTGGCCACCAAGAACCAGGTGTCCCTGAC	717
DSLEFIASKLA-T359	CTTGCTGGCGATGAACTCCAGGCTGTCCATCTCCTCCCGGGAGGGG	718
anti-hHER2-HC-T359-	CTGGAGTTCATCGCCAGCAAGCTGGCCAAGAACCAGGTGTCCCTGACCTG	719
DSLEFIASKLA-K360	CTTGCTGGCGATGAACTCCAGGCTGTCGGTCATCTCCTCCCGGGAGG	720
anti-hHER2-HC-K360-	CTGGAGTTCATCGCCAGCAAGCTGGCCAACCAGGTGTCCCTGACCTGTC	721
DSLEFIASKLA-N361	CTTGCTGGCGATGAACTCCAGGCTGTCCTTGGTCATCTCCTCCCGGGAG	722
anti-hHER2-HC-N384-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCCAGCCCGAGAACAACTAC	723
DSLEFIASKLA-G385	CTTGCTGGCGATGAACTCCAGGCTGTCGTTGCTCTCCCACTCCACGGC	724
anti-hHER2-HC-E388-	CTGGAGTTCATCGCCAGCAAGCTGGCCAACAACTACAAGACCACACCTCCAG	725
DSLEFIASKLA-N389	CTTGCTGGCGATGAACTCCAGGCTGTCCTCGGGCTGGCCGTTGCTC	726
anti-hHER2-HC-N389-	CTGGAGTTCATCGCCAGCAAGCTGGCCAACTACAAGACCACACCTCCAGTGC	727
DSLEFIASKLA-N390	CTTGCTGGCGATGAACTCCAGGCTGTCGTTCTCGGGCTGGCCGTTGC	728
anti-hHER2-HC-T394-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCTCCAGTGCTGGACAGCGAC	729
DSLEFIASKLA-P395	CTTGCTGGCGATGAACTCCAGGCTGTCTGTGGTCTTGTAGTTGTTCTCGGGC	730
anti-hHER2-HC-P395-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCAGTGCTGGACAGCGACGG	731
DSLEFIASKLA-P396	CTTGCTGGCGATGAACTCCAGGCTGTCAGGTGTGGTCTTGTAGTTGTTCTCG	732
anti-hHER2-HC-D399-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCGACGGCAGCTTCTTCCTG	733
DSLEFIASKLA-S400	CTTGCTGGCGATGAACTCCAGGCTGTCGTCCAGCACTGGAGGTGTGGTC	734
anti-hHER2-HC-S400-	CTGGAGTTCATCGCCAGCAAGCTGGCCGACGGCAGCTTCTTCCTGTACAG	735
DSLEFIASKLA-D401	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGTCCAGCACTGGAGGTGTG	736
anti-hHER2-HC-D401-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCAGCTTCTTCCTGTACAGCAAG	737
DSLEFIASKLA-G402	CTTGCTGGCGATGAACTCCAGGCTGTCGTCGCTGTCCAGCACTGGAGG	738
anti-hHER2-HC-S415-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGGTGGCAGCAGGGCAACGTG	739
DSLEFIASKLA-R416	CTTGCTGGCGATGAACTCCAGGCTGTCGGACTTGTCCACGGTCAGCTTG	740
anti-hHER2-HC-R416-	CTGGAGTTCATCGCCAGCAAGCTGGCCTGGCAGCAGGGCAACGTGTTC	741
DSLEFIASKLA-W417	CTTGCTGGCGATGAACTCCAGGCTGTCCCTGGACTTGTCCACGGTCAG	742
anti-hHER2-HC-W417-	CTGGAGTTCATCGCCAGCAAGCTGGCCCAGCAGGGCAACGTGTTCAGC	743
DSLEFIASKLA-Q418	CTTGCTGGCGATGAACTCCAGGCTGTCCCACCTGGACTTGTCCACGGTC	744
anti-hHER2-HC-Q418-	CTGGAGTTCATCGCCAGCAAGCTGGCCCAGGGCAACGTGTTCAGCTGC	745
DSLEFIASKLA-Q419	CTTGCTGGCGATGAACTCCAGGCTGTCCTGCCACCTGGACTTGTCCAC	746
anti-hHER2-HC-Q419-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCAACGTGTTCAGCTGCAGC	747
DSLEFIASKLA-G420	CTTGCTGGCGATGAACTCCAGGCTGTCCTGCTGCCACCTGGACTTGTC	748
anti-hHER2-HC-G420-	CTGGAGTTCATCGCCAGCAAGCTGGCCAACGTGTTCAGCTGCAGCGTGATG	749
DSLEFIASKLA-N421	CTTGCTGGCGATGAACTCCAGGCTGTCGCCCTGCTGCCACCTGGAC	750
anti-hHER2-HC-N421-	CTGGAGTTCATCGCCAGCAAGCTGGCCGTGTTCAGCTGCAGCGTGATGC	751
DSLEFIASKLA-V422	CTTGCTGGCGATGAACTCCAGGCTGTCGTTGCCCTGCTGCCACCTGG	752
anti-hHER2-HC-H433-	CTGGAGTTCATCGCCAGCAAGCTGGCCAACCACTACACCCAGAAGAGCCTG	753
DSLEFIASKLA-N434	CTTGCTGGCGATGAACTCCAGGCTGTCGTGCAGGGCCTCGTGCATCAC	754
anti-hHER2-HC-N434-	CTGGAGTTCATCGCCAGCAAGCTGGCCCACTACACCCAGAAGAGCCTGAG	755
DSLEFIASKLA-H435	CTTGCTGGCGATGAACTCCAGGCTGTCGTTGTGCAGGGCCTCGTGCATC	756
anti-hHER2-HC-S442-	CTGGAGTTCATCGCCAGCAAGCTGGCCCTGTCCCCCGGCAAGTAATCTAG	757
DSLEFIASKLA-L443	CTTGCTGGCGATGAACTCCAGGCTGTCGCTCAGGCTCTTCTGGGTGTAG	758
anti-hHER2-HC-L443-	CTGGAGTTCATCGCCAGCAAGCTGGCCTCCCCCGGCAAGTAATCTAGACAC	759
DSLEFIASKLA-S444	CTTGCTGGCGATGAACTCCAGGCTGTCCAGGCTCAGGCTCTTCTGGGTG	760
anti-hHER2-HC-S444-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCCGGCAAGTAATCTAGACACCTC	761
DSLEFIASKLA-P445	CTTGCTGGCGATGAACTCCAGGCTGTCGGACAGGCTCAGGCTCTTCTG	762
anti-hHER2-HC-P445-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCAAGTAATCTAGACACCTCAGAC	763
DSLEFIASKLA-G446	CTTGCTGGCGATGAACTCCAGGCTGTCGGGGGACAGGCTCAGGCTC	764
anti-hHER2-HC-G446-	CTGGAGTTCATCGCCAGCAAGCTGGCCAAGTAATCTAGACACCTCAGACAATCAA	765
DSLEFIASKLA-K447	C
	CTTGCTGGCGATGAACTCCAGGCTGTCGCCGGGGGACAGGCTCAG	766
anti-hHER2-LC-T109-	CTGAGCTGGCTGCTGAGACTGCTGAACGTGGCCGCTCCCAGCGTG	767
GDSLSWLLRLLN-V110	TCTCAGCAGCCAGCTCAGGCTGTCGCCCGTTCGTTTGATCTCCACCTTGGT	768
anti-hHER2-LC-V110-	CTGAGCTGGCTGCTGAGACTGCTGAACGCCGCTCCCAGCGTGTTCATC	769
GDSLSWLLRLLN-A111	TCTCAGCAGCCAGCTCAGGCTGTCGCCCACCGTTCGTTTGATCTCCACCTTG	770
anti-hHER2-LC-A111-	CTGAGCTGGCTGCTGAGACTGCTGAACGCTCCCAGCGTGTTCATCTTCC	771
GDSLSWLLRLLN-A112	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGCCACCGTTCGTTTGATCTCC	772
anti-hHER2-LC-P119-	CTGAGCTGGCTGCTGAGACTGCTGAACCCCAGCGACGAGCAGCTGAAG	773
GDSLSWLLRLLN-P120	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGGAAGATGAACACGCTGGG	774
anti-hHER2-LC-P120-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCGACGAGCAGCTGAAGAGC	775
GDSLSWLLRLLN-S121	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGGGGGAAGATGAACACGCTG	776
anti-hHER2-LC-S121-	CTGAGCTGGCTGCTGAGACTGCTGAACGACGAGCAGCTGAAGAGCGGC	777
GDSLSWLLRLLN-D122	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGGGGGGGAAGATGAACAC	778
anti-hHER2-LC-D122-	CTGAGCTGGCTGCTGAGACTGCTGAACGAGCAGCTGAAGAGCGGCACC	779
GDSLSWLLRLLN-E123	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTCGCTGGGGGGGAAGATGAAC	780
anti-hHER2-LC-Y140-	CTGAGCTGGCTGCTGAGACTGCTGAACCCCCGGGAGGCCAAGGTG	781
GDSLSWLLRLLN-P141	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTAGAAGTTGTTCAGCAGGCACAC	782
anti-hHER2-LC-P141-	CTGAGCTGGCTGCTGAGACTGCTGAACCGGGAGGCCAAGGTGCAGTG	783
GDSLSWLLRLLN-R142	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGGTAGAAGTTGTTCAGCAGGC	784
anti-hHER2-LC-R142-	CTGAGCTGGCTGCTGAGACTGCTGAACGAGGCCAAGGTGCAGTGGAAG	785
GDSLSWLLRLLN-E143	TCTCAGCAGCCAGCTCAGGCTGTCGCCCCGGGGGTAGAAGTTGTTCAGC	786
anti-hHER2-LC-E143-	CTGAGCTGGCTGCTGAGACTGCTGAACGCCAAGGTGCAGTGGAAGGTG	787
GDSLSWLLRLLN-A144	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTCCCGGGGGTAGAAGTTGTTC	788
anti-hHER2-LC-D151-	CTGAGCTGGCTGCTGAGACTGCTGAACAACGCCCTGCAGAGCGGCAAC	789
GDSLSWLLRLLN-N152	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTCCACCTTCCACTGCACCTTG	790
anti-hHER2-LC-N152-	CTGAGCTGGCTGCTGAGACTGCTGAACGCCCTGCAGAGCGGCAACAG	791
GDSLSWLLRLLN-A153	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTTGTCCACCTTCCACTGCACC	792
anti-hHER2-LC-A153-	CTGAGCTGGCTGCTGAGACTGCTGAACCTGCAGAGCGGCAACAGCCAG	793
GDSLSWLLRLLN-L154	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGCGTTGTCCACCTTCCACTG	794
anti-hHER2-LC-L154-	CTGAGCTGGCTGCTGAGACTGCTGAACCAGAGCGGCAACAGCCAGGAG	795
GDSLSWLLRLLN-Q155	TCTCAGCAGCCAGCTCAGGCTGTCGCCCAGGGCGTTGTCCACCTTCCAC	796
anti-hHER2-LC-Q155-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCGGCAACAGCCAGGAGAGC	797
GDSLSWLLRLLN-S156	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTGCAGGGCGTTGTCCACCTTC	798
anti-hHER2-LC-E161-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCGTCACCGAGCAGGACAGC	799
GDSLSWLLRLLN-S162	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTCCTGGCTGTTGCCGCTCTG	800
anti-hHER2-LC-S162-	CTGAGCTGGCTGCTGAGACTGCTGAACGTCACCGAGCAGGACAGCAAG	801
GDSLSWLLRLLN-V163	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTCTCCTGGCTGTTGCCGC	802
anti-hHER2-LC-V163-	CTGAGCTGGCTGCTGAGACTGCTGAACACCGAGCAGGACAGCAAGGAC	803
GDSLSWLLRLLN-T164	TCTCAGCAGCCAGCTCAGGCTGTCGCCGACGCTCTCCTGGCTGTTGCC	804
anti-hHER2-LC-T164-	CTGAGCTGGCTGCTGAGACTGCTGAACGAGCAGGACAGCAAGGACTCC	805
GDSLSWLLRLLN-E165	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGTGACGCTCTCCTGGCTGTTG	806
anti-hHER2-LC-E165-	CTGAGCTGGCTGCTGAGACTGCTGAACCAGGACAGCAAGGACTCCACC	807
GDSLSWLLRLLN-Q166	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTCGGTGACGCTCTCCTGGC	808
anti-hHER2-LC-Q166-	CTGAGCTGGCTGCTGAGACTGCTGAACGACAGCAAGGACTCCACCTACAG	809
GDSLSWLLRLLN-D167	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTGCTCGGTGACGCTCTCCTG	810
anti-hHER2-LC-D167-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCAAGGACTCCACCTACAGCC	811
GDSLSWLLRLLN-S168	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTCCTGCTCGGTGACGCTCTC	812
anti-hHER2-LC-T197-	CTGAGCTGGCTGCTGAGACTGCTGAACCACCAGGGCCTGTCCAGCC	813
GDSLSWLLRLLN-H198	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGTCACCTCGCAGGCGTACAC	814
anti-hHER2-LC-H198-	CTGAGCTGGCTGCTGAGACTGCTGAACCAGGGCCTGTCCAGCCCC	815
GDSLSWLLRLLN-Q199	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTGGGTCACCTCGCAGGCG	816
anti-hHER2-LC-Q199-	CTGAGCTGGCTGCTGAGACTGCTGAACGGCCTGTCCAGCCCCGTG	817
GDSLSWLLRLLN-G200	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTGGTGGGTCACCTCGCAGG	818
anti-hHER2-LC-G200-	CTGAGCTGGCTGCTGAGACTGCTGAACCTGTCCAGCCCCGTGACCAAG	819
GDSLSWLLRLLN-L201	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCCCTGGTGGGTCACCTCG	820
anti-hHER2-LC-L201-	CTGAGCTGGCTGCTGAGACTGCTGAACTCCAGCCCCGTGACCAAGAGC	821
GDSLSWLLRLLN-S202	TCTCAGCAGCCAGCTCAGGCTGTCGCCCAGGCCCTGGTGGGTCACC	822
anti-hHER2-LC-S202-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCCCCGTGACCAAGAGCTTC	823
GDSLSWLLRLLN-S203	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGACAGGCCCTGGTGGGTC	824
anti-hHER2-LC-S203-	CTGAGCTGGCTGCTGAGACTGCTGAACCCCGTGACCAAGAGCTTCAACAG	825
GDSLSWLLRLLN-P204	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGGACAGGCCCTGGTGG	826
anti-hHER2-LC-K207-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCTTCAACAGGGGCGAGTGC	827
GDSLSWLLRLLN-S208	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTTGGTCACGGGGCTGGACAG	828
anti-hHER2-LC-T109-	CTGGAGTTCATCGCCAGCAAGCTGGCCGTGGCCGCTCCCAGCGTG	829
DSLEFIASKLA-V110	CTTGCTGGCGATGAACTCCAGGCTGTCCGTTCGTTTGATCTCCACCTTGGT	830
anti-hHER2-LC-V110-	CTGGAGTTCATCGCCAGCAAGCTGGCCGCCGCTCCCAGCGTGTTCATC	831
DSLEFIASKLA-A111	CTTGCTGGCGATGAACTCCAGGCTGTCCACCGTTCGTTTGATCTCCACCTTG	832
anti-hHER2-LC-A111-	CTGGAGTTCATCGCCAGCAAGCTGGCCGCTCCCAGCGTGTTCATCTTCC	833
DSLEFIASKLA-A112	CTTGCTGGCGATGAACTCCAGGCTGTCGGCCACCGTTCGTTTGATCTCC	834
anti-hHER2-LC-P119-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCCAGCGACGAGCAGCTGAAG	835
DSLEFIASKLA-P120	CTTGCTGGCGATGAACTCCAGGCTGTCGGGGAAGATGAACACGCTGGG	836
anti-hHER2-LC-P120-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCGACGAGCAGCTGAAGAGC	837
DSLEFIASKLA-S121	CTTGCTGGCGATGAACTCCAGGCTGTCGGGGGGGAAGATGAACACGCTG	838
anti-hHER2-LC-S121-	CTGGAGTTCATCGCCAGCAAGCTGGCCGACGAGCAGCTGAAGAGCGGC	839
DSLEFIASKLA-D122	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGGGGGGGAAGATGAACAC	840
anti-hHER2-LC-D122-	CTGGAGTTCATCGCCAGCAAGCTGGCCGAGCAGCTGAAGAGCGGCACC	841
DSLEFIASKLA-E123	CTTGCTGGCGATGAACTCCAGGCTGTCGTCGCTGGGGGGGAAGATGAAC	842
anti-hHER2-LC-Y140-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCCCGGGAGGCCAAGGTG	843
DSLEFIASKLA-P141	CTTGCTGGCGATGAACTCCAGGCTGTCGTAGAAGTTGTTCAGCAGGCACAC	844
anti-hHER2-LC-P141-	CTGGAGTTCATCGCCAGCAAGCTGGCCCGGGAGGCCAAGGTGCAGTG	845
DSLEFIASKLA-R142	CTTGCTGGCGATGAACTCCAGGCTGTCGGGGTAGAAGTTGTTCAGCAGGC	846
anti-hHER2-LC-R142-	CTGGAGTTCATCGCCAGCAAGCTGGCCGAGGCCAAGGTGCAGTGGAAG	847
DSLEFIASKLA-E143	CTTGCTGGCGATGAACTCCAGGCTGTCCCGGGGGTAGAAGTTGTTCAGC	848
anti-hHER2-LC-E143-	CTGGAGTTCATCGCCAGCAAGCTGGCCGCCAAGGTGCAGTGGAAGGTG	849
DSLEFIASKLA-A144	CTTGCTGGCGATGAACTCCAGGCTGTCCTCCCGGGGGTAGAAGTTGTTC	850
anti-hHER2-LC-D151-	CTGGAGTTCATCGCCAGCAAGCTGGCCAACGCCCTGCAGAGCGGCAAC	851
DSLEFIASKLA-N152	CTTGCTGGCGATGAACTCCAGGCTGTCGTCCACCTTCCACTGCACCTTG	852
anti-hHER2-LC-N152-	CTGGAGTTCATCGCCAGCAAGCTGGCCGCCCTGCAGAGCGGCAACAG	853
DSLEFIASKLA-A153	CTTGCTGGCGATGAACTCCAGGCTGTCGTTGTCCACCTTCCACTGCACC	854
anti-hHER2-LC-A153-	CTGGAGTTCATCGCCAGCAAGCTGGCCCTGCAGAGCGGCAACAGCCAG	855
DSLEFIASKLA-L154	CTTGCTGGCGATGAACTCCAGGCTGTCGGCGTTGTCCACCTTCCACTG	856
anti-hHER2-LC-L154-	CTGGAGTTCATCGCCAGCAAGCTGGCCCAGAGCGGCAACAGCCAGGAG	857
DSLEFIASKLA-Q155	CTTGCTGGCGATGAACTCCAGGCTGTCCAGGGCGTTGTCCACCTTCCAC	858
anti-hHER2-LC-Q155-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCGGCAACAGCCAGGAGAGC	859
DSLEFIASKLA-S156	CTTGCTGGCGATGAACTCCAGGCTGTCCTGCAGGGCGTTGTCCACCTTC	860
anti-hHER2-LC-E161-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCGTCACCGAGCAGGACAGC	861
DSLEFIASKLA-S162	CTTGCTGGCGATGAACTCCAGGCTGTCCTCCTGGCTGTTGCCGCTCTG	862
anti-hHER2-LC-S162-	CTGGAGTTCATCGCCAGCAAGCTGGCCGTCACCGAGCAGGACAGCAAG	863
DSLEFIASKLA-V163	CTTGCTGGCGATGAACTCCAGGCTGTCGCTCTCCTGGCTGTTGCCGC	864
anti-hHER2-LC-V163-	CTGGAGTTCATCGCCAGCAAGCTGGCCACCGAGCAGGACAGCAAGGAC	865
DSLEFIASKLA-T164	CTTGCTGGCGATGAACTCCAGGCTGTCGACGCTCTCCTGGCTGTTGCC	866
anti-hHER2-LC-T164-	CTGGAGTTCATCGCCAGCAAGCTGGCCGAGCAGGACAGCAAGGACTCC	867
DSLEFIASKLA-E165	CTTGCTGGCGATGAACTCCAGGCTGTCGGTGACGCTCTCCTGGCTGTTG	868
anti-hHER2-LC-E165-	CTGGAGTTCATCGCCAGCAAGCTGGCCCAGGACAGCAAGGACTCCACC	869
DSLEFIASKLA-Q166	CTTGCTGGCGATGAACTCCAGGCTGTCCTCGGTGACGCTCTCCTGGC	870
anti-hHER2-LC-Q166-	CTGGAGTTCATCGCCAGCAAGCTGGCCGACAGCAAGGACTCCACCTACAG	871
DSLEFIASKLA-D167	CTTGCTGGCGATGAACTCCAGGCTGTCCTGCTCGGTGACGCTCTCCTG	872
anti-hHER2-LC-D167-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCAAGGACTCCACCTACAGCC	873
DSLEFIASKLA-S168	CTTGCTGGCGATGAACTCCAGGCTGTCGTCCTGCTCGGTGACGCTCTC	874
anti-hHER2-LC-T197-	CTGGAGTTCATCGCCAGCAAGCTGGCCCACCAGGGCCTGTCCAGCC	875
DSLEFIASKLA-H198	CTTGCTGGCGATGAACTCCAGGCTGTCGGTCACCTCGCAGGCGTACAC	876
anti-hHER2-LC-H198-	CTGGAGTTCATCGCCAGCAAGCTGGCCCAGGGCCTGTCCAGCCCC	877
DSLEFIASKLA-Q199	CTTGCTGGCGATGAACTCCAGGCTGTCGTGGGTCACCTCGCAGGCG	878
anti-hHER2-LC-Q199-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCCTGTCCAGCCCCGTG	879
DSLEFIASKLA-G200	CTTGCTGGCGATGAACTCCAGGCTGTCCTGGTGGGTCACCTCGCAGG	880
anti-hHER2-LC-G200-	CTGGAGTTCATCGCCAGCAAGCTGGCCCTGTCCAGCCCCGTGACCAAG	881
DSLEFIASKLA-L201	CTTGCTGGCGATGAACTCCAGGCTGTCGCCCTGGTGGGTCACCTCG	882
anti-hHER2-LC-L201-	CTGGAGTTCATCGCCAGCAAGCTGGCCTCCAGCCCCGTGACCAAGAGC	883
DSLEFIASKLA-S202	CTTGCTGGCGATGAACTCCAGGCTGTCCAGGCCCTGGTGGGTCACC	884
anti-hHER2-LC-S202-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCCCCGTGACCAAGAGCTTC	885
DSLEFIASKLA-S203	CTTGCTGGCGATGAACTCCAGGCTGTCGGACAGGCCCTGGTGGGTC	886
anti-hHER2-LC-S203-	CTGGAGTTCATCGCCAGCAAGCTGGCCCCCGTGACCAAGAGCTTCAACAG	887
DSLEFIASKLA-P204	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGGACAGGCCCTGGTGG	888
anti-hHER2-LC-K207-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCTTCAACAGGGGCGAGTGC	889
DSLEFIASKLA-S208	CTTGCTGGCGATGAACTCCAGGCTGTCCTTGGTCACGGGGCTGGACAG	890
B. subtilis Sfp pET22b	GAAGGAGATATACATATGAAAATTTATGGGATTTACATGGATCGC	891
	GTGGTGGTGGTGGTGGTGCAGCAATTCTTCATAGGAGACCATCG	892
pET22b	CACCACCACCACCACCACTGAG	893
	CATATGTATATCTCCTTCTTAAAGTTAAACAAAATTATTTC	894
TEV into B. subtilis	GAGAACCTGTACTTCCAAGGCCACCACCACCACCACCACTGAG	895
Sfp pET22b	GCCTTGGAAGTACAGGTTCTCCAGCAATTCTTCATAGGAGACCATCG	896
B. subtilis Sfp K28E	GTCTTTCATTTCACCAGAGGAGCGCGAAAAATGCCGTCGCT	897
	AGCGACGGCATTTTTCGCGCTCCTCTGGTGAAATGAAAGAC	898
B. subtilis Sfp T44E	AAAGAAGATGCTCACCGCGAGCTGCTGGGAGATGTGCTG	899
	CAGCACATCTCCCAGCAGCTCGCGGTGAGCATCTTCTTT	900
B. subtilis Sfp C77Y	GCAGGAATATGGCAAACCGTATATTCCAGATCTTCCAGATGC	901
	GCATCTGGAAGATCTGGAATATACGGTTTGCCATATTCCTGC	902
E. coli AcpS pET22b	AATAATTTTGTTTAACTTTAAGAAGGAGATATACATATGGCAATATTAGGTTTAG	903
	GCACG
	CAGTGGTGGTGGTGGTGGTGACTTTCAATAATTACCGTGGCACAAGC	904
pET22b	CACCACCACCACCACCACTG	905
	ATGTATATCTCCTTCTTAAAGTTAAACAAAATTATT	906
anti-hHER2-HC-V64L-	CTGGAGTTCATCGCCAGCAAGCTGGCCAAGGGCCGTTTCACTATAAGCGC	907
EFIASKLA-K65	CTTGCTGGCGATGAACTCCAGGCTATCGGCATATCTAGTATAACCATTCGTAGG	908
anti-hHER2-HC-S63-	GACAGCCTGGAGTTCATCGCCAGCAAGGTCAAGGGCCGTTTCACTATAAGC	909
LEFIASK-V64	CTTGCTGGCGATGAACTCCAGGCTGTCGGCATATCTAGTATAACCATTCGTAGG	910
anti-hHER2-HC-V64L-	GACAGCCTGGAGTTCATCGCCAGCAAGGGCCGTTTCACTATAAGCGCAGAC	911
EFIAS-K65	CTTGCTGGCGATGAACTCCAGGCTGTCGGCATATCTAGTATAACCATTCGTAGG	912
anti-hHER2-LC-S76D-S77-	CTGGAGTTCATCGCCAGCAAGCTGGCCCAGCCGGAAGACTTCGCAACTTATTAC	913
L78-EFIASKLA-Q79	CTTGCTGGCGATGAACTCCAGGCTGTCGATGGTCAGAGTGAAATCCGTCC	914
anti-hHER2-HC-S132G-K133D-	CTGAGCTGGCTGCTGAGACTGCTGAACTGCCTGGTGAAGGACTACTTCC	915
S134-T135L-S136-G137W-	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGGGGGCCAGGGGG	916
G138L-T139L-A140R-A141L-
L142-G143N
anti-hHER2-HC-K133G-S134D-	CTGAGCTGGCTGCTGAGACTGCTGAACACAGCCGCCCTGGGCTGC	917
T135S-S136L-G137S-G138W-	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGCTGGGGGCCAGGG	918
LLRLLN-T139
anti-hHER2-HC-S134G-T135D-	GGCGACAGCCTGAGCTGGCTGGCCCTGGGCTGCCTGGTG	919
S136-G137L-G138S-T139W-	CAGCCAGCTCAGGCTGTCGCCCTTGCTGCTGGGGGCCAGG	920
A140L
anti-hHER2-HC-S134G-T135D-	CTGAGACTGCTGAACGCCCTGGGCTGCCTGGTG	921
S136-G137L-G138S-T139W-	GTTCAGCAGTCTCAGCAGCCAGCTCAGGCTGTCGC	922
A140L-LRLLN-A141
anti-hHER2-HC-T135G-S136D-	CTGAGCTGGCTGCTGAGACTGCTGAACGCCGCCCTGGGCTGCCTG	923
G137S-G138L-T139S-WLLRLLN-	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTCTTGCTGCTGGGGGCC	924
A140
anti-hHER2-HC-T359G-K360D-	GGCGACAGCCTGAGCTGGCTGACCTGTCTGGTGAAGGGCTTC	925
N361S-Q362L-V363S-S364W	CAGCCAGCTCAGGCTGTCGCCCATCTCCTCCCGGGAGGGG	926
anti-hHER2-HC-S132G-K133D-	GGCGACAGCCTGAGCTGGCTGACAGCCGCCCTGGGCTGC	927
S134-T135L-S136-G137W-G138L	CAGCCAGCTCAGGCTGTCGCCGCTGGGGGCCAGGGGG	928
anti-hHER2-HC-S134G-T135D-	CTGAGCTGGCTGCTGAGACTGCTGAACGTGAAGGACTACTTCCCCGAGC	929
S136-G137L-G138S-T139W-	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTTGCTGCTGGGGGCCAGG	930
A140L-A141L-L142R-G143L-
C144L-L145N
anti-hHER2-HC-L193G-G194D-	GGCGACAGCCTGAGCTGGCTGTGCAACGTGAACCACAAGCCCAG	931
T195S-Q196L-T197S-Y198W-	CAGCCAGCTCAGGCTGTCGCCGCTGCTGCTGGGCACTGTC	932
I199L
anti-hHER2-HC-L193G-G194D-	CTGAGACTGCTGAACTGCAACGTGAACCACAAGCCCAG	933
T195S-Q196L-T197S-Y198W-	GTTCAGCAGTCTCAGCAGCCAGCTCAGGCTGTCGC	934
I199L-LRLLN-C200
anti-hHER2-HC-L193G-G194D-	CTGAGCTGGCTGCTGAGACTGCTGAACAAGCCCAGCAACACCAAGGTGG	935
T195S-Q196L-T197S-Y198W-	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCTGCTGCTGGGCACTGTC	936
I199L-C200L-N201R-V202L-
N203L-H204N
anti-hHER2-HC-E357G-M 358D-	GGCGACAGCCTGAGCTGGCTGTCCCTGACCTGTCTGGTGAAGG	937
T359S-K360L-N361S-Q362W-	CAGCCAGCTCAGGCTGTCGCCCTCCCGGGAGGGGGGC	938
V363L
anti-hHER2-HC-E388-GDSLSWL-	GGCGACAGCCTGAGCTGGCTGAACAACTACAAGACCACACCTCCAG	939
N389	CAGCCAGCTCAGGCTGTCGCCCTCGGGCTGGCCGTTGCTC	940
anti-hHER2-HC-P189G-S190D-	GCGACAGCCTGAGCTGGCTGCAGACCTACATCTGCAACGTGAAC	941
S191-S192L-L193S-G194W-	CAGCCAGCTCAGGCTGTCGCCCACTGTCACCACGCTGGACAG	942
T195L
anti-hHER2-HC-P189G-S190D-	CTGAGCTGGCTGCTGAGACTGCTGAACAACGTGAACCACAAGCCCAGCAAC	943
S191-S192L-L193S-G194W-	TCTCAGCAGCCAGCTCAGGCTGTCGCCCACTGTCACCACGCTGGACAG	944
T195L-Q196L-T197R-Y198L-
I199L-C200N
anti-hHER2-ANTI-HHER2-HC-	CTGAGCTGGCTGCTGAGACTGCTGAACTTCCTGTACAGCAAGCTGACCGTG	945
L398G-D399-S400-D401L-	TCTCAGCAGCCAGCTCAGGCTGTCGCCCACTGGAGGTGTGGTCTTGTAG	946
G402S-S403W-F404L-LRLLN-
F405
anti-hHER2-HC-P189G-S190D-	CTGAGACTGCTGAACCAGACCTACATCTGCAACGTGAAC	947
S191-S192L-L193S-G194W-	GTTCAGCAGTCTCAGCAGCCAGCTCAGGCTGTCGC	948
T195L-LRLLN-Q196
anti-hHER2-HC-P189D-S190-	CTGGAGTTCATCGCCAGCAAGCTGGCCTGCAACGTGAACCACAAGCCCAG	949
S191L-S192E-L193F-G194I-	CTTGCTGGCGATGAACTCCAGGCTGTCCACTGTCACCACGCTGGACAG	950
T195A-Q196S-T197K-Y198L-
I199A
anti-hHER2-HC-S190G-S191D-	CTGAGCTGGCTGCTGAGACTGCTGAACTACATCTGCAACGTGAACCACAAGC	951
S192-L193-G194S-T195W-	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGGCACTGTCACCACGCTGG	952
Q196L-T197L-RLLN-Y198
anti-hHER2-HC-S190D-S191-	CTGGAGTTCATCGCCAGCAAGCTGGCCAACGTGAACCACAAGCCCAGCAAC	953
S192L-L193E-G194F-T195I-	CTTGCTGGCGATGAACTCCAGGCTGTCGGGCACTGTCACCACGCTGG	954
Q196A-T197S-Y198K-I199L-
C200A
anti-hHER2-HC-D413-K414S-	AGCCTGAGCTGGCTGCTGAGACTGCTGTTCAGCTGCAGCGTGATGCACG	955
S415L-R416S-W417-Q418L-	CAGCAGTCTCAGCAGCCAGCTCAGGCTGTCCACGGTCAGCTTGCTGTAC	956
Q419L-G420R-N421L-V422L
anti-hHER2-HC-D413-K414S-	AGCCTGGAGTTCATCGCCAGCAAGCTGTTCAGCTGCAGCGTGATGCACG	957
S415L-R416E-W417F-Q418I-	CAGCTTGCTGGCGATGAACTCCAGGCTGTCCACGGTCAGCTTGCTGTAC	958
Q419A-G420S-N421K-V422L
anti-hHER2-HC-E382D-S383-	GACAGCCTGGAGTTCATCGCCAACAACTACAAGACCACACCTCCAG	959
N384L-G385E-Q386F-P387I-	GGCGATGAACTCCAGGCTGTCCCACTCCACGGCGATGTCGC	960
E388A
anti-hHER2-HC-E382D-S383-	GACAGCCTGAGCTGGCTGCTGAACAACTACAAGACCACACCTCCAG	961
N384L-G385S-Q386W-P387L-	CAGCAGCCAGCTCAGGCTGTCCCACTCCACGGCGATGTCGC	962
E388L
anti-hHER2-HC-V2-	CTGAGCTGGCTGCTGAGACTGCTGAACCAGCTGGTGGAGTCTGGCGG	963
GDSLSWLLRLLN-Q3	TCTCAGCAGCCAGCTCAGGCTGTCGCCAACCTCAGCAGTGGCACCGGG	964
anti-hHER2-LC-I2-	CTGAGCTGGCTGCTGAGACTGCTGAACCAGATGACCCAGTCCCCGAGC	965
GDSLSWLLRLLN-Q3	TCTCAGCAGCCAGCTCAGGCTGTCGCCGATATCAGCAGTGGCACCGGG
anti-hHER2-LC-C214-	CTGAGCTGGCTGCTGAGACTGCTGAACTAATCTAGACACCTCAGACAATCAACC	966
GDSLSWLLRLLN	TCTCAGCAGCCAGCTCAGGCTGTCGCCGCACTCGCCCCTGTTGAAGC	967
anti-hHER2-LC-I2-	CTGGAGTTCATCGCCAGCAAGCTGGCCCAGATGACCCAGTCCCCGAG	968
DSLEFIASKLA-Q3	CTTGCTGGCGATGAACTCCAGGCTGTCGATATCAGCAGTGGCACCGGG	969
anti-hHER2-LC-C214-	CTGGAGTTCATCGCCAGCAAGCTGGCCTAATCTAGACACCTCAGACAATCAACC	970
DSLEFIASKLA	CTTGCTGGCGATGAACTCCAGGCTGTCGCACTCGCCCCTGTTGAAGC	971
anti-hHER2-HC-V2-	CTGGAGTTCATCGCCAGCAAGCTGGCCCAGCTGGTGGAGTCTGGCGG	972
DSLEFIASKLA-Q3	CTTGCTGGCGATGAACTCCAGGCTGTCAACCTCAGCAGTGGCACCGG	973
anti-hHER2-HC-K447-	CTGAGCTGGCTGCTGAGACTGCTGAACTAATCTAGACACCTCAGACAATCAACC	974
GDSLSWLLRLLN	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTTGCCGGGGGACAGGCTC	975
anti-hHER2-HC-K447-	CTGGAGTTCATCGCCAGCAAGCTGGCCTAATCTAGACACCTCAGACAATCAACC	976
DSLEFIASKLA	CTTGCTGGCGATGAACTCCAGGCTGTCCTTGCCGGGGGACAGGCTC	977
anti-hHER2-HC-S132D-K133S-	CTGGAGTTCATCGCCAGCAAGCTGGCCGGCTGCCTGGTGAAGGACTAC	978
S134L-T135E-S136F-G137I-	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGGGGGCCAGGGGG	979
G138A-T139S-A140K-A141L-
L142A
anti-hHER2-HC-S190D-S191-	AGCCTGGAGTTCATCGCCAGCAAGCTGTGCAACGTGAACCACAAGCCCAG	980
S192L-L193E-G194F-T195I-	CTTGCTGGCGATGAACTCCAGGCTGTCGGGCACTGTCACCACGCTGG	981
Q196A-T197S-Y198K-I199L
anti-hHER2-HC-S191D-S192-	GACAGCCTGGAGTTCATCGCCAGCAAGTGCAACGTGAACCACAAGCCCAG	982
L193-G194E-T195F-Q196I-	CTTGCTGGCGATGAACTCCAGGCTGTCGCTGGGCACTGTCACCACGC	983
T197A-Y198S-I199K
anti-hHER2-HC-L398D-D399S-	CTGGAGTTCATCGCCAGCAAGCTGGCCAAGCTGACCGTGGACAAGTCCAG	984
S400L-D401E-G402F-S403I-	CTTGCTGGCGATGAACTCCAGGCTGTCCACTGGAGGTGTGGTCTTGTAG	985
F404A-F405S-L406K-Y407L-
S408A
anti-hHER2-HC-E388-	GACAGCCTGGAGTTCATCGCCAGCAAGAACAACTACAAGACCACACCTCCAG	986
DSLEFIASK-N389	CTTGCTGGCGATGAACTCCAGGCTGTCCTCGGGCTGGCCGTTGCTC	987
anti-hHER2-HC-E388-	AGCCTGGAGTTCATCGCCAGCAAGCTGAACAACTACAAGACCACACCTCCAG	988
DSLEFIASKL-N389	CTTGCTGGCGATGAACTCCAGGCTGTCCTCGGGCTGGCCGTTGCTC	989
pET22b/TEV	GAGAACCTGTACTTCCAAGGCCAC	990
	ATGTATATCTCCTTCTTAAAGTTAAACAAAATTATTTC	991
	CACCACCACCACCACCACTGAG	992
PPTase_C.	TTGGAAGTACAGGTTCTCACGTTCGCAGAGGAATTTACACACTTC	993
thermocellum_pET22b/TEV	TAAGAAGGAGATATACATATGGGTTTTCTGCCGAAAGAGAAAAAG	994
ACP_ C.	GTGGTGGTGGTGGTGGTGGCTATTATTTTTAATATATTCAACGACGTCGC	995
thermocellum_pET22b	TAAGAAGGAGATATACATATGTTCGAGAAAGTCCGTAAAATCATTGC	996
ACP_E.coli_pET22b	GTGGTGGTGGTGGTGGTGCGCCTGGTGGCCGTTGATGTAATC	997
	TAAGAAGGAGATATACATATGAGCACTATCGAAGAACGCGTTAAG	998
anti-hHER2-HC-E388-	CTGGACATGCTGGAGTGGAGCCTGATGAACAACTACAAGACCACACCTCCAG	999
GDSLDMLEWSLM-N389	CCACTCCAGCATGTCCAGGCTGTCGCCCTCGGGCTGGCCGTTGCTC	1000
anti-hHER2-HC-V2-	CTGGACATGCTGGAGTGGAGCCTGATGCAGCTGGTGGAGTCTGGCGG	1001
GDSLDMLEWSLM-Q3	CCACTCCAGCATGTCCAGGCTGTCGCCAACCTCAGCAGTGGCACCGG	1002
mAb2-HC-T359-GDSLSWLLRLLN-	CTGAGCTGGCTGCTGAGACTGCTGAACAAGAACCAGGTCAGCCTGACCTG	1003
K360	TCTCAGCAGCCAGCTCAGGCTGTCGCCGGTCATCTCCTCCCGGGATG	1004
mAb2-HC-E388-GDSLSWLLRLLN-	CTGAGCTGGCTGCTGAGACTGCTGAACAACAACTACAAGACCACGCCTCCC	1005
N389	TCTCAGCAGCCAGCTCAGGCTGTCGCCCTCCGGCTGCCCATTGCTCTC	1006
anti-hHER2-HC-Y296-	CTGAGCTGGCTGCTGAGACTGCTGAACAACAGCACCTACAGGGTGGTGTC	1007
GDSLSWLLRLLN-N297	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTACTGCTCCTCTCTGGGCTTG
anti-hHER2-HC-N297-	CTGAGCTGGCTGCTGAGACTGCTGAACAGCACCTACAGGGTGGTGTCC	1008
GDSLSWLLRLLN-S298	TCTCAGCAGCCAGCTCAGGCTGTCGCCGTTGTACTGCTCCTCTCTGGGC
anti-hHER2-HC-Y296-	CTGGAGTTCATCGCCAGCAAGCTGGCCAACAGCACCTACAGGGTGGTGTC	1009
DSLEFIASKLA-N297	CTTGCTGGCGATGAACTCCAGGCTGTCGTACTGCTCCTCTCTGGGCTTG
anti-hHER2-HC-N297-	CTGGAGTTCATCGCCAGCAAGCTGGCCAGCACCTACAGGGTGGTGTCC	1010
DSLEFIASKLA-S298	CTTGCTGGCGATGAACTCCAGGCTGTCGTTGTACTGCTCCTCTCTGGGC
Tras_HC_S6_i415_S418A	GCCCGAGGGCGACGCCCTGAGCTGGCTG	1011
	CAGCCAGCTCAGGGCGTCGCCCTCGGGC
Human PPTase_N-His6 (PIPE	CATCACCATCACCATCACGTTTTCCCTGCCAAACGGTTCTGC	1012
cloning)	ACGGGCCCTCTAGACTTATGACTTTGTACCATTTCGTATTGGAATTTC
pRS_N-His6 (PIPE cloning)	TAAGTCTAGAGGGCCCGTTTAAACC	1013
	GTGATGGTGATGGTGATGAGGCTGAGCAGTGGCACCGG
Human PPTase_C-His6 (PIPE	GGTGCCACTGCTCAGCCTGTTTTCCCTGCCAAACGGTTCTGC	1014
cloning)	GTGATGGTGATGGTGATGTGACTTTGTACCATTTCGTATTGGAATTTC
pRS_C-His6 (PIPE cloning)	CATCACCATCACCATCACTAAGTCTAG	1015
	AGGCTGAGCAGTGGCACCGG
T. maritima PPTase	ATGATAGTCGGTGTGGGTATTGATG	1016
	TTACTCTCCGATGAGGATGTTACC
Top = Forward primer
Bottom = Reverse primer

TABLE 9
Expression yields of Trastuzumab IgGs with inserted/grafted peptide-tags (HC, heavy chain; LC,
light chain). The values in brackets, ( ) [ ], correspond to antibody yields after scale-up.
Construct (whole antibody tested, the name represents part of	Yield per
the HC or LC that contains the peptide tag, the paired wildtype	liter culture/	Expression	SEQ
chain is not listed)	mg	scale/L	ID NO
anti-hHER2-HC-S134G-T135D-S136-G137L-G138S-T139W-A140L	26	0.02	105
anti-hHER2-HC-L193G-G194D-T195S-Q196L-T197S-Y198W-I199L	73	0.02	117
anti-hHER2-HC-P189G-S190D-S191-S192L-L193S-G194W-T195L	61 (36)	0.02 (1)	109
anti-hHER2-HC-T359G-K360D-N361S-Q362L-V363S-S364W	43	0.02	123
anti-hHER2-HC-T359-GDSLSWLLRLLN-K360	45 (29)	0.02 (1)	121
mAb2-HC-T359-GDSLSWLLRLLN-K360	78	0.05	148
mAb2-HC-E388-GDSLSWLLRLLN-N389	26	0.05	149
anti-hHER2-HC-E357G-M358D-T359S-K360L-N361S-Q362W-V363L	59	0.02	120
anti-hHER2-HC-E388-GDSLSWLLRLLN-N389	39 (13) [16]	0.02 (1) [0.5]	127
anti-hHER2-HC-E388-GDSLSWL-N389	39	0.02	126
anti-hHER2-LC-C214-GDSLSWLLRLLN	42	0.02	28
anti-hHER2-HC-S134G-T135D-S136-G137L-G138S-T139W-A140L-	2	0.05	106
LRLLN-A141
anti-hHER2-HC-K133G-S134D-T135S-S136L-G137S-G138W-	19	0.05	103
LLRLLN-T139
anti-hHER2-HC-P189G-S190D-S191-S192L-L193S-G194W-T195L-	48	0.3	110
LRLLN-Q196
anti-hHER2-HC-S190G-S191D-S192-L193-G194S-T195W-Q196L-	33	0.05	113
T197L-RLLN-Y198
anti-hHER2-HC-V2-GDSLSWLLRLLN-Q3	20 (11)	0.05 (0.5)	94
anti-hHER2-LC-I2-GDSLSWLLRLLN-Q3	3	0.05	26
anti-hHER2-LC-I2-DSLEFIASKLA-Q3	43 (29)	0.05 (0.4)	27
anti-hHER2-LC-C214-DSLEFIASKLA	55	0.05	29
anti-hHER2-HC-V2-DSLEFIASKLA-Q3	34 (20)	0.05 (0.4)	95
anti-hHER2-HC-K447-DSLEFIASKLA	32	0.05	141
anti-hHER2-HC-S132D-K133S-S134L-T135E-S136F-G137I-G138A-	32	0.05	102
T139S-A140K-A141L-L142A
anti-hHER2-HC-S190D-S191-S192L-L193E-G194F-T195I-Q196A-	41	0.05	114
T197S-Y198K-I199L
anti-hHER2-HC-S191D-S192-L193-G194E-T195F-Q196I-T197A-	30	0.05	116
Y198S-I199K
anti-hHER2-HC-L398D-D399S-S400L-D401E-G402F-S403I-F404A-	13	0.05	135
F405S-L406K-Y407L-S408A
anti-hHER2-HC-Y296-GDSLSWLLRLLN-N297	23	0.05	143
anti-hHER2-HC-N297-GDSLSWLLRLLN-S298	23	0.05	145
anti-hHER2-HC-Y296-DSLEFIASKLA-N297	21	0.05	144
anti-hHER2-HC-N297-DSLEFIASKLA-S298	23	0.05	146
anti-hHER2-HC-E388-DSLEFIASKLA-N389	36 (15)	0.05 (0.5)	129
anti-hHER2-HC-E388-DSLEFIASKL-N389	35 (20)	0.05 (0.5)	130
anti-hHER2-HC-E388-DSLEFIASK-N389	56	0.05	131
anti-hHER2-HC-T359-DSLEFIASKLA-K360	43 (18)	0.05 (0.5)	122
anti-hHER2-HC-S190D-S191-S192L-L193E-G194F-T195I-Q196A-	19	0.05	115
T197S-Y198K-I199L-C200A
anti-hHER2-HC-P189D-S190-S191L-S192E-L193F-G194I-T195A-	40	0.05	112
Q196S-T197K-Y198L-I199A
anti-hHER2-HC-D413-K414S-S415L-R416E-W417F-Q418I-Q419A-	29	0.05	138
G420S-N421K-V422L
anti-hHER2-HC-E382D-S383-N384L-G385E-Q386F-P387I-E388A	39	0.05	125
anti-hHER2-HC-E382D-S383-N384L-G385S-Q386W-P387L-E388L	33	0.05	124
anti-hHER2-LC-S76D-S77-L78-EFIASKLA-Q79	13	0.05	30
anti-hHER2-HC-S63-LEFIASK-V64	12	0.05	97
anti-hHER2-HC-V64L-EFIAS-K65	23	0.05	98
anti-hHER2-HC-V64L-EFIASKLA-K65	11	0.05	99
anti-hHER2-HC-V2-GDSLSWLLRLLN-Q3-E388-DSLEFIASKLA-N389	8 (19)	0.05 (0.4)	142
anti-hHER2-HC-V2-GDSLDMLEWSLM-Q3	56	0.05	96
anti-hHER2-HC-E388-GDSLDMLEWSLM-N389	32	0.05	132

Example 3. Production of Sfp 4′-Phosphopantetheinyl Transferase (PPTase)

The B. subtilis Sfp PPTase was cloned into the pET22b expression vector by using the PIPE method (see Klock et al., Proteins 71:982-994 (2008)). To allow cleavage of the C-terminal His₆ tag, a TEV (tobacco etch virus) protease recognition site was inserted downstream of the Sfp coding sequence. All primers used for cloning are listed in Table 8.

Protein expression and purification were performed according to Yin et al. (see Nat. Protoc. 1:280-285 (2006)) with some minor modifications. First, a 5 mL LB starter culture was inoculated from the glycerol stock of E. coli BL21 (DE3) cells harboring the pET22b/sfp expression plasmid. The culture was grown to saturation by overnight incubation at 37° C. at 300 rpm. The next day, the starter culture was used to inoculate 1 L of TB medium (Sigma), which was agitated at 300 rpm and maintained at 37° C. After reaching an optical density of 0.5 at 600 nm, the culture was induced by the addition of IPTG to a final concentration of 1 mM and the temperature was reduced to 30° C. The culture was shaken for another 12-16 hours and the bacterial cells were harvested by centrifugation. Prior to use, the cell pellet was stored at −20° C.

To initiate protein purification, the frozen pellet was thawed for 15 minutes on ice and re-suspended in a buffer containing 20 mM Tris/HCl (pH 7.9), 0.5 M NaCl, 5 mM imidazole, and 2 U/mL DNase I (3 mL of buffer per g wet weight of cells). Cell lysis was induced by sonication for 4 min, with intervals of 0.5 sec on and 0.5 sec off. In order to remove insoluble cell debris, the resulting lysate was centrifuged at 40,000×g for 20 min at 4° C. The His₆-tagged Sfp enzyme was then captured by the addition of 4 mL of 50% Ni-NTA slurry (Qiagen) to the cleared lysate. After shaking for 1 hour at 4° C., the resin-lysate mixture was poured into a disposable column (Bio-Rad). The settled resin was washed with 25 column volumes of 50 mM NaH₂PO₄, 300 mM NaCl, 20 mM imidazole (pH 8.0) and eluted with 5 column volumes of 50 mM NaH₂PO₄, 300 mM NaCl, 250 mM imidazole (pH 8.0). Purified Sfp enzyme was then dialyzed twice against 10 mM Tris/HCl, 1 mM EDTA, 10% glycerol (pH 7.5) using a Slide-A-Lyzer Dialysis Cassette (Pierce) with a 3.5 kDa cut-off, and subsequently concentrated to a final concentration of at least 100 μM using an Amicon Ultra-15 Centrifugal Filter Unit (Millipore) with a 10 kDa cut-off. Finally, the concentrated enzyme was aliquoted, flash-frozen in liquid nitrogen, and stored at −80° C.

In order to improve the purity of Sfp using reverse Ni-NTA chromatography, a TEV cleavage site was introduced before the C-terminal His₆ tag. Ni-NTA purification of this construct was performed as described above. However, after elution, the Sfp enzyme was exchanged into TEV cleavage buffer containing 50 mM Tris/HCl, 50 mM NaCl (pH 8.0). His₆ tag removal was carried out by digestion with 7% (w/w) TEV protease at 23° C. for 1 hour and then at 4° C. for 16 hours. The TEV-digested Sfp enzyme was then reloaded onto a Ni-NTA column equilibrated with 1×PBS (pH 7.2). The cleaved enzyme was collected from the column flow-through and from a washing step involving 5 column volumes of 50 mM NaH₂PO₄, 300 mM NaCl, 20 mM imidazole (pH 8.0). Purified Sfp enzyme was then dialyzed twice against 10 mM Tris/HCl, 1 mM EDTA, 10% glycerol (pH 7.5) using a Slide-A-Lyzer Dialysis Cassette (Pierce) with a 3.5 kDa cut-off. Following dialysis, Sfp was concentrated to a final concentration of at least 100 μM using an Amicon Ultra-15 Centrifugal Filter Unit (Millipore) with a 10 kDa cut-off. Finally, the concentrated enzyme was aliquoted, flash-frozen in liquid nitrogen, and stored at −80° C.

The purity of Sfp was assessed by SDS-PAGE. His₆ tag removal was verified by LC-MS and Sfp yield was quantified by ultraviolet spectroscopy at 280 nm (ND-1000 UV-Vis Spectrophotometer, NanoDrop Technologies, Wilmington, Del.) using a molar extinction coefficient of 28620 M⁻¹ cm⁻¹. 48 mg of TEV-cleaved Sfp enzyme was obtained per liter culture.

Example 4. Identification and Production of PPTase Homologs and Mutants

Sfp Mutant R4-4

Using standard molecular biology methods, we inserted the following mutations into the B. subtilis Sfp PPTase: Lys28Glu, Thr44Glu, and Cys77Tyr. The sequences of the oligonucleotides used for the mutagenesis reactions are listed in Table 8.

For protein expression, 0.5 L of TB medium was inoculated with a 5 mL starter culture. The culture was agitated at 300 rpm and maintained at 37° C. After reaching an optical density of 0.5 at 600 nm, the culture was induced by the addition of IPTG to a final concentration of 1 mM and the temperature was reduced to 30° C. The culture was shaken for another 16 hours at 300 rpm and the bacterial cells were harvested by centrifugation (15 min at 3400 rpm). Prior to use, the cell pellet was stored at −20° C.

The frozen pellet was thawed for 10 minutes on ice and re-suspended in a buffer containing 50 mM Tris/HCl (pH 8), 300 mM NaCl, 10 mM imidazole, 1 U/mL DNase I, and Complete™ EDTA-free protease inhibitor cocktail tablets (Roche) (3 mL of buffer per g wet weight of cells). Cell lysis was induced by sonication for 3 min on ice, with intervals of 0.5 sec on and 0.5 sec off. After incubation for another 10 min on ice, the lysate was centrifuged at 40,000×g for 30 min at 4° C. The His₆-tagged Sfp mutant R4-4 was then captured by the addition of 2 mL of 50% Ni-NTA slurry (Qiagen) to the cleared lysate. After shaking for 1 hour at 4° C., the resin-lysate mixture was poured into a disposable column (Bio-Rad). The flowthrough was collected and the settled resin was washed with 50 column volumes of 50 mM Tris, 300 mM NaCl, 20 mM imidazole (pH 8.0) and eluted with 5 column volumes of 50 mM Tris, 300 mM NaCl, 250 mM imidazole (pH 8.0). After buffer-exchanging the eluate into TEV protease cleavage buffer containing 50 mM Tris/HCl, 50 mM NaCl (pH 8.0) using a PD-10 column, His₆ tag removal was carried out by digestion with 7% (w/w) TEV protease at 23° C. for 1 hour and then at 4° C. for 16 hours.

The TEV-digested Sfp mutant R4-4 was then reloaded onto a Ni-NTA column (1 mL bed volume), which was equilibrated with 1×PBS (pH 7.2). The cleaved enzyme was collected from the column flow-through and from a washing step involving 5 column volumes of 50 mM Tris, 300 mM NaCl, 20 mM imidazole (pH 8.0). The purified Sfp mutant R4-4 was then buffer-exchanged against 10 mM Tris/HCl, 1 mM EDTA, 10% glycerol (pH 7.5) using PD-10 columns. According to Bradford assay using BSA as standard, the enzyme had a final concentration of 3.1 mg/mL at a final volume of 17 mL, which corresponds to 105 mg of TEV-cleaved R4-4 mutant per liter culture. Finally, the enzyme was aliquoted into 100 to 1000 μL fractions, flash-frozen in liquid nitrogen, and stored at −80° C. The purity of the enzyme was assessed by SDS-PAGE analysis and His₆ tag removal was verified by ESI-MS.

AcpS

Using standard molecular biology methods, we cloned the acpS gene from E. coli K-12 into a pET22b vector that allows expression of the recombinant enzyme with a C-terminal His6 tag. The sequences of the oligonucleotides used for cloning are listed in Table 8.

Following inoculation from a saturated 5 mL starter culture, the AcpS enzyme was expressed in 1 L of TB medium. After shaking the culture at 37° C. with 300 rpm, protein production was induced by the addition of 1 mM IPTG at an optical density of 0.5 (600 nm). Protein expression was carried out overnight at 30° C. and 300 rpm. The next day, the cells were harvested by centrifugation at 3400 rpm for 15 min. The cell pellet was stored at −20° C. prior to protein purification.

To initiate protein purification, the frozen pellet was thawed for 10 min on ice and resuspended in buffer (3 mL of buffer per g wet weight of cells) containing 50 mM Tris/HCl (pH 8), 300 mM NaCl, 10 mM imidazole, 1 U/mL DNase I, and Complete™ EDTA-free protease inhibitor cocktail tablets (Roche). Cell lysis was achieved by sonicating the cell suspension on ice for 3 min with intervals of 0.5 sec on and 0.5 sec off. After another incubation period of 10 min on ice, the lysate was centrifuged at 40,000 g for 30 min at 4° C. Then 2 mL of 50% Ni-NTA slurry was added to the cleared lysate and the lysate/resin mixture was shaken for 1 hour at 4° C. The lysate/resin mixture was poured into a disposable column. After collecting the flowthrough, the Ni-NTA column was washed with 50 column volumes of buffer containing 50 mM Tris (pH 8), 300 mM NaCl, and 20 mM imidazole. Elution was performed with 5 column volumes of buffer containing 50 mM Tris (pH 8), 300 mM NaCl, and 250 mM imidazole. Using a 3.5 kDa cut-off dialysis cassette (Slide-A-Lyzer, Thermo Scientific), the eluate was dialyzed overnight into buffer containing 50 mM Tris (pH 8), and 300 mM NaCl. Precipitated protein was removed by using a 0.45 μm filter (Millipore). After addition of glycerol to a final concentration of 10% (v/v), the Ni-NTA-purified protein was flash-frozen in liquid nitrogen and stored at −80° C. (100 and 200 μL aliquots). The purity of AcpS was assessed by SDS-PAGE and the yield was quantified by Bradford assay using BSA as standard. About 13 mg of AcpS enzyme was obtained per liter culture.

T. maritima PPTase

T. maritima PPTase expression was carried out at a 1 L scale in native FM medium by inoculation with a 10 mL saturated starter culture. The 1 L culture was shaken at 300 rpm at a temperature of 37° C. After 2.5 hours, the culture reached an optical density of 0.5 at 600 nm. Protein production was induced by the addition of arabinose to a final concentration of 0.1% (w/v) and the culture was shaken for an additional 4 hours. Cells were harvested by centrifugation at 4000 rpm for 15 minutes and the cell pellets were stored at −20° C. Initial purification of T. maritima PPTase was performed by IMAC (immobilized metal affinity chromatography) using Ni-NTA agarose resin (Qiagen). Cell pellets were thawed and resuspended in 60 mL lysis buffer (40 mM Tris buffer (pH 8.0), 300 mM NaCl, 10 mM Imidazole, 1 mM TCEP). The cell suspension was sonicated on ice for 1.5 minutes (using 1 sec pulses) and centrifuged at 15000 rpm for 30 minutes at 5° C. The cleared lysate was loaded onto a 1.5 mL Ni-NTA column. After collecting the flowthrough, the column was washed with 5 column volumes of wash buffer (40 mM Tris buffer (pH 8.0), 300 mM NaCl, 40 mM imidazole, 10% glycerol, 1 mM TCEP). Protein elution was carried out with 2 column volumes of elution buffer (20 mM Tris buffer (pH 8.0), 150 mM NaCl, 300 mM Imidazole, 1 mM TCEP).

The Ni-NTA eluate was further purified using a Superdex 75 column (GE Healthcare) connected to an Akta FPLC system. Size-exclusion chromatography (SEC) was performed at flow rate of 1 mL/min in 10 mM Tris buffer (pH 7.4) supplemented with 1 mM EDTA and 10% (v/v) glycerol. After analyzing protein-containing fractions by SDS-PAGE, fractions containing the T. maritima PPTase were pooled and dialyzed again against the buffer previously used for SEC. The purified enzyme was then concentrated using an Amicon Ultra-15 Centrifugal Filter Unit (Millipore) with a 10 kDa cut-off. Precipitate was removed by centrifugation at 13000 rpm for 2 min using a table top centrifuge. The concentrated protein (1.0 mg/mL, 48 μM) was aliquoted into 100 μL fractions, flash-frozen in liquid nitrogen, and stored at minus 80° C. The purity of T. maritima PPTase was assessed by SDS-PAGE and the yield was quantified by Bradford assay using BSA as standard. After all purification steps, 1.4 mg of AcpS enzyme was obtained per liter culture.

Example 5. Synthesis of Coenzyme A (CoA) Analogs CoA-Maleimidoethylamido-Tetramethylrhodamine

Tetramethylrhodamine-C2-maleimide (5.5 mg, 10.4 μmol) dissolved in 300 μL of DMSO was added to CoA (10.4 μmol in 150 μL water) in 750 μL of 10×PBS buffer and stirred at 23° C. for 1 hour. After the reaction, the reaction mixture was lyophilized to obtain the crude product, which was purified by RP-C18 flash chromatography. Fractions of the desired product were combined and lyophilized to afford CoA-maleimidoethylamido-tetramethylrhodamine (9.8 mg with 94.4% purity) as a dark purple powder. ESI-MS calculated for C₅₂H₆₄N₁₀O₂₂P₃S [MH]⁺: 1320.3; observed: 1320.3.

CoA-maleimidocaproyl (MC)-MMAF

MC-MMAF (see Doronina et al., Bioconj. Chem. 17:114-124 (2006)) (36.0 mg, 38.9 mol) dissolved in 1.8 mL of DMSO was added to CoA (39.0 mol in 312 μL water) in 2.9 mL of 10×PBS buffer and stirred at 23° C. for 1 hour. After the reaction, the reaction mixture was lyophilized to obtain the crude material, which was purified by RP-C18 flash chromatography. Fractions of the desired product were combined and lyophilized to afford CoA-MC-MMAF (35.5 mg with 97.5% purity) as a white powder. ESI-MS calculated for C₇₀H₁₁₂N₁₃O₂₇P₃S [MH]⁺: 1691.7; observed: 1691.2.

CoA-MC-Val-Cit-PABC-MMAF

MC-Val-Cit-PABC-MMAF (see Doronina et al., Bioconj. Chem. 17:114-124 (2006)) (5.7 mg, 4.3 mol) dissolved in 300 μL of DMSO was added to CoA (4.3 mol in 34 μL water) in 2666 μL of 10×PBS buffer and stirred at 23° C. for 1 hour. After the reaction, the reaction mixture was lyophilized to obtain the crude material, which was purified by RP-C18 flash chromatography. Fractions of the desired product were combined and lyophilized to afford CoA-MC-Val-Cit-PABC-MMAF (6.1 mg with 98.0% purity) as a white powder. ESI-MS calculated for C₈₉H₁₃₉N₁₈O₃₂P₃S [MH₂]²⁺/2: 1049.4; observed: 1049.4.

CoA-Ac-Ahx-M MAF

Bromoacetyl-Ahx-MMAF (see, Alley et al., Bioconj. Chem. 19:759-765 (2008)) (1.3 mg, 1.4 μmol) dissolved in 400 μL of DMSO was added to CoA (5.4 μmol in 43 μL water) in 3.6 mL of borate buffer (6.7 mM at pH 8.5) and stirred at 23° C. for 24 hours. After the reaction, the reaction mixture was lyophilized to obtain the crude material, which was purified by RP-C18 flash chromatography. Fractions of the desired product were combined and lyophilized to afford CoA-Ac-Ahx-MMAF (1.1 mg with 96.9% purity) as a white powder. ESI-MS calculated for C₆₈H₁₁₂N₁₃O₂₆P₃S [MH]⁺: 1651.7; observed: 1651.3.

CoA-Open-Ring-MC-MMAF

CoA-MC-MMAF (5 μmol in 1 mL of water) was added to 9 mL of 1 M NH₄OH_(aq) and stirred at 23° C. for 30 minutes. After the reaction, the reaction mixture was lyophilized to obtain the crude material, which was purified by RP-C18 flash chromatography. Fractions of the desired product were combined and lyophilized to afford 3.9 mg of maleimide-ring-opened CoA-MC-MMAF as a mixture of four positional and diastereomeric isomers as shown in the scheme above (white powder, 96.6% purity). ESI-MS calculated for C₇₀H₁₁₄N₁₃O₂₈P₃S [MH]⁺: 1709.7; observed: 1709.2.

Example 6. Labeling of Peptide-Tagged IgGs with CoA Analogs In Vitro

To exemplify the single-step conjugation of CoA analogs to peptide-tagged IgGs in vitro, various peptide-tagged Trastuzumab constructs were reacted with CoA-MC-MMAF in the presence of Sfp enzyme. Generally, conjugation reactions were carried out in 50 or 75 mM HEPES or Tris buffer, pH 7.5 or 8.0 supplemented with 10.0 or 12.5 mM MgCl₂. The final concentration of peptide-tagged Trastuzumab was kept constant at 2.5 μM, which corresponds to 5.0 μM per peptide tag, while the final concentration of the CoA substrates was usually varied between 40 μM and 100 μM. To initiate the conjugation reaction, Sfp enzyme was added to give a final concentration of typically 1 μM. The enzymatic reaction was allowed to proceed at either 23° C. or 37° C. for 16 hours. After this time period, the reaction progress was analyzed by ESI-MS and HPLC.

Example 7. Labeling of Insertions

Nearly quantitative conjugation of CoA-MC-MMAF to six Trastuzumab antibodies and one 2^nd antibody (“mAb2”) against a different target with inserted S6- or ybbR-tags was accomplished by incubating reaction mixtures with Sfp as described in Example 6. HPLC of single-step conjugation reaction mixtures (Table 10) of anti-hHER2-HC-T359-GDSLSWLLRLLN-K360 (SEQ ID NO:121, FIG. 5A), anti-hHER2-HC-E388-GDSLSWLLRLLN-N389 (SEQ ID NO:127, FIG. 5B), anti-hHER2-HC-V2-DSLEFIASKLA-Q3 (SEQ ID NO:95, FIG. 5C), anti-hHER2-HC-V2-GDSLSWLLRLLN-Q3 (SEQ ID NO:94, FIG. 5D), anti-hHER2-HC-E388-DSLEFIASKL-N389 (SEQ ID NO:130, FIG. 5E), anti-hHER2-HC-E388-DSLEFIASKLA-N389 (SEQ ID NO: 129, FIG. 5F), and mAb2-HC-T359-GDSLSWLLRLLN-K360 (SEQ ID NO:148, FIG. 5G) indicate near complete conversion of the tagged antibodies into an immunoconjugate with an approximate drug-to-antibody-ratio (DAR) of 2. ESI-MS of reduced conjugate samples suggest site-specific modification of only the heavy chain as designed. For anti-hHER2-LC-12-DSLEFIASKLA-Q3 (SEQ ID NO:27, FIG. 5H), HPLC suggests only partial formation of the immunoconjugate as significant amounts of unmodified antibody (39%, retention time 4.8 mins) remain and a mixture of DAR=1 (46%, retention time 5.4 mins) and DAR=2 (16%, retention time 5.9 mins) species is observed.

TABLE 10
MS and HPLC analysis of conjugation reactions with inserted tags:
	Antibody construct (whole
	antibody tested, the name
	represents part of the HC or			Expected mass
	LC that contains the peptide	Observed	Expected mass	unmodified	DAR = 2
SEQ	tag,the paired wildtype chain	mass	immunoconjugate	antibody	according
ID NO	is not listed)	(Da)	(Da)	(Da)	to HPLC
121	anti-hHER2-HC-T359-	51785.20	51791	50525	92%
	GDSLSWLLRLLN-K360
127	anti-hHER2-HC-E388-	51786.40	51791	50525	97%
	GDSLSWLLRLLN-N389
95	anti-hHER2-HC-V2-	51588.00	51598	50332	96%
	DSLEFIASKLA-Q3
142	anti-hHER2-HC-V2-	51780.40	51791	50525	100%
	GDSLSWLLRLLN-Q3
130	anti-hHER2-HC-E388-	51517.20	51527	50261	94%
	DSLEFIASKL-N389
129	anti-hHER2-HC-E388-	51588.00	51598	50332	100%
	DSLEFIASKLA-N389
27	anti-hHER2-LC-I2-	25878.40	25884	24618	16%
	DSLEFIASKLA-Q3
148	mAb2-HC-T359-	52848.80	52849	51597	95%
	GDSLSWLLRLLN-K360	(major);
		51600.40
		(minor)

As shown in FIG. 6, the trastuzumab immunoconjugates (A) anti-hHER2-HC-V2-GDS-ppan-MC-MMAF-LSWLLRLLN-Q3, (B) anti-hHER2-HC-E388-DS-ppan-MC-MMAF-LEFIASKLA-N389, and (C) anti-hHER2-HC-E388-DS-ppan-MC-MMAF-LEFIASKL-N389 were analyzed by analytical size-exclusion chromatography (AnSEC) on a Shodex PROTEIN KW-803 column. In all three cases, the ADCs were monomeric (no detectable amounts of aggregated material).

Example 8. Labeling of Constructs with Grafted Peptide Tags

Single-step, in vitro Sfp-catalyzed conjugation of CoA-MC-MMAF to Trastuzumab antibody with a grafted ybbR tag was also attempted. The Sfp-catalyzed reaction of the IgG1 construct anti-hHER2-HC-S190D-S191-S192L-L193E-G194F-T1951-Q196A-T197S-Y198K-1199L was performed as described in Example 6. HPLC (FIG. 7) and ESI-MS analysis of the reaction mixture indicate that the immunoconjugate with MMAF (expected mass conjugate: 50489 Da, expected mass unmodified antibody: 49223 Da, observed: 49216.8 Da) was not formed. Other grafted constructs also failed to react and failed to form immunoconjugates.

Example 9. Labeling of Mixed Grafting/Insertion Constructs

Single-step, in vitro Sfp-catalyzed conjugation of CoA-MC-MMAF to Trastuzumab antibodies with grafted/inserted S6- or ybbR-tags was also attempted. Two Trastuzumab mutants anti-hHER2-HC-V64L-EFIASKLA-K65 and anti-hHER2-LC-S76D-S77-L78-EFIASKLA-Q79 were reacted with CoA-MC-MMAF and Sfp as described in Example 6. While anti-hHER2-HC-V64L-EFIASKLA-K65 is partially modified as indicated by HPLC of the reaction mixture (FIG. 8A), anti-hHER2-LC-S76D-S77-L78-EFIASKLA-Q79 (FIG. 8B) failed to react under identical conditions (Table 11).

TABLE 11
ESI-MS results of conjugation reactions with mixed grafted/inserted tags:
	Antibody construct (whole
	antibody tested, the name
	represents part of the HC or			Expected mass
	LC that contains the peptide	Observed	Expected mass	unmodified	DAR = 2
SEQ	tag, the paired wildtype chain	mass	immunoconjugate	antibody	according
ID NO	is not listed)	(Da)	(Da)	(Da)	to HPLC
99	anti-hHER2-HC-	51287.20	51297	50031	32%
	V64L-EFIASKLA-K65
30	anti-hHER2-LC-	24324.80	25597	24331	0%
	S76D-S77-L78-
	EFIASKLA-Q79

Example 10. Labeling with Fluorescent Dyes

To extend enzymatic antibody labeling beyond the site-specific attachment of cytotoxins, we demonstrate the feasibility of Sfp-catalysis to generate antibody-fluorophore conjugates. This example represents two Sfp-catalyzed conjugations of CoA-tetramethylrhodamine (CoA-TMR) to Trastuzumab antibodies with either grafted or inserted S6 tags performed as described in Example 6. HPLC traces of reaction mixtures were monitored at both 280 nm and 555 nm (FIG. 9). The latter wavelength is near the absorption maximum of the TMR dye (˜550 nm). Furthermore, the data of the deconvoluted mass spectra of the antibody-fluorophore conjugates is summarized in Table 12.

For the anti-hHER2-HC-P189G-S190D-S191-S192L-L193S-G194W-T195L that contains a truncated grafted S6 tag, conjugation resulted primarily in the formation of a two-dye per antibody conjugate (FIG. 9A). Likewise, the anti-hHER2-HC-T359-GDSLSWLLRLLN-K360 with a full-length S6 tag inserted between residue T359 and K360 showed predominantly conjugation of two dye molecules to each antibody (FIG. 9B). The results illustrate the S6 tags can be used for conjugation of fluorescent labeling of modified antibodies.

TABLE 12
ESI-MS results of the conjugation reactions with a fluorescent dye:
	Antibody construct (whole
	antibody tested, the name
	represents part of the HC or		Expected mass	Expected mass
	LC that contains the peptide	Observed	fluorophore	unmodified
SEQ	tag,the paired wildtype chain	mass	conjugate	antibody
ID NO	is not listed)	(Da)	(Da)	(Da)
109	anti-hHER2-HC-P189G-	50177.20	50180	49286
	S190D-S191-S192L-L193S-
	G194W-T195L
121	anti-hHER2-HC-T359-	51422.00	51419	50525
	GDSLSWLLRLLN-K360

Example 11. Near Quantitative Labeling with Cytotoxins Linked Through Thioether or Hydrolyzed Maleimide Linkage

Although not observed for conjugates of the invention, maleimide-linked payloads may undergo deconjugation in plasma via maleimide exchange with reactive thiols of albumin, glutathione, and cysteine (Alley et al., Bioconjugate Chem. 2008, 19, 759-765). Maleimide-based conjugates can be stabilized through chemical ring-opening of the maleimidocaproyl linkage (see, Shen et al., Nature Biotech. 30:184-189 (2012)). To test this hydrolysis procedure, the respective ADC of anti-hHER2-HC-T359-GDSLSWLLRLLN-K360 was prepared using CoA-open-ring-MC-MMAF. Moreover, to test alternative thiol-reactive chemistries, we attached the MMAF cytotoxin to the terminal thiol of CoA via an acetamide-based thioether linkage resulting in CoA-Ac-Ahx-MMAF (see, Alley et al., Bioconj. Chem. 19:759-765 (2008)). The ESI-MS and HPLC results of these enzymatic conjugation reactions (according to the protocol described in Example 6) are summarized in Table 13. Near quantitative labeling with DAR=2 was observed for anti-hHER2-HC-T359-GDSLSWLLRLLN-K360 reacted with CoA-open-ring-MC-MMAF (FIG. 10A) and anti-hHER2-HC-T359-GDSLSWLLRLLN-K360 reacted with CoA-Ac-Ahx-MC-MMAF (FIG. 10B).

TABLE 13
ESI-MS results of the conjugation reactions with alternative linkers:
SEQ ID NO of the antibody
(whole antibody tested, the
name represents part of the				Expected mass
HC or LC that contains		Observed	Expected mass	unmodified	DAR = 2
the peptide tag, the paired	CoA	mass	immunoconjugate	antibody	according
wildtype chain is not listed)	substrate	(Da)	(Da)	(Da)	to HPLC
121	maleimide-	51802.00	51809	50525	85%
	ring-opened
	CoA-MC-
	MMAF
121	CoA-Ac-Ahx-	51742.40	51750	50525	80%
	MMAF

Example 12. Near Quantitative Labeling with Cytotoxin with Cleavable Linker

To demonstrate the labeling of peptide-tagged IgGs with cytotoxins that are attached via cleavable linkers, we conjugated CoA-MC-Val-Cit-PABC-MMAF containing the cathepsin B-sensitive valine-citrulline linker to either anti-hHER2-HC-T359-GDSLSWLLRLLN-K360 (FIG. 11A) or anti-hHER2-HC-E388-GDSLSWLLRLLN-N389 (FIG. 11B) in the presence of Sfp. HPLC and ESI-MS results of this single-step enzymatic conjugation are summarized in Table 14 and indicate near quantitative labeling with a DAR=2 for both tag positions.

TABLE 14
ESI-MS results of the conjugation reactions with CoA-MC-Val-Cit-PABC-MMAF:
				Expected mass
		Observed	Expected mass	unmodified	DAR = 2
SEQ	Antibody	mass	immunoconjugate	antibody	according to
ID NO	construct	(Da)	(Da)	(Da)	HPLC
121	anti-hHER2-HC-T359-	52189.60	52196	50525	91%
	GDSLSWLLRLLN-K360
127	anti-hHER2-HC-E388-	52188.40,	52196	50525	95%
	GDSLSWLLRLLN-N389	51412.40

Example 13. Optimization of Labeling Reaction as a Function of pH

The purpose of this experiment was to determine the optimal pH range for Sfp-catalyzed conjugation of CoA substrates to peptide-tagged antibodies. In three experiments, 2.5 μM of anti-hHER2-HC-E388-GDSLSWLLRLLN-N389 or 2.5 μM of anti-hHER2-HC-T359-GDSLSWLLRLLN-K360 were reacted with 10 μM of CoA-MC-MMAF in the presence of 0.25 μM of Sfp (for anti-hHER2-HC-E388-GDSLSWLLRLLN-N389) or 1.0 μM of Sfp (for anti-hHER2-HC-T359-GDSLSWLLRLLN-K360), and the pH was titrated from pH 5.0 to 10.0. In order to cover this pH range, five buffers were utilized: 75 mM sodium acetate buffer for pH 5.0; 75 mM MES buffer for pH 5.5, 6.0, and 6.5; 75 mM HEPES buffer for pH 7.0, 7.5, and 8.0; 75 mM sodium borate buffer for pH 9.0; 75 mM sodium carbonate buffer for pH 10.0. All buffers were supplemented with 12.5 mM of MgCl₂ to ensure enzyme activity. The pH titration series was performed at 23° C. for 25 to 35 min in a volume of 100 μL for each reaction. After quenching the enzymatic reaction by the addition of 30 μL of 4% (v/v) trifluoroacetic acid (TFA), reaction mixtures were analyzed by HPLC at 280 nm as summarized in Table 15.

TABLE 15
HPLC results of labeling reactions as a function of pH:
	Antibody construct (whole
	antibody tested, the name
	represents part of the HC or
	LC that contains the peptide
SEQ	tag, the paired wildtype chain	pH
ID NO	is not listed)	value	DAR = 0	DAR = 1	DAR = 2
127	anti-hHER2-HC-E388-	5.0	100%; 100%	0%; 0%	0%; 0%
	GDSLSWLLRLLN-N389
121	anti-hHER2-HC-T359-		100%	0%	0%
	GDSLSWLLRLLN-K360
127	anti-hHER2-HC-E388-	5.5	100%	0%	0%
	GDSLSWLLRLLN-N389
127	anti-hHER2-HC-E388-	6.0	88%; 90%	12%; 10%	0%; 0%
	GDSLSWLLRLLN-N389
121	anti-hHER2-HC-T359-		100%	0%	0%
	GDSLSWLLRLLN-K360
127	anti-hHER2-HC-E388-	6.5	68%	23%	9.2%
	GDSLSWLLRLLN-N389
127	anti-hHER2-HC-E388-	7.0	25%; 26%	48%; 44%	28%; 31%
	GDSLSWLLRLLN-N389
121	anti-hHER2-HC-T359-		77%	23%	0%
	GDSLSWLLRLLN-K360
127	anti-hHER2-HC-E388-	7.5	12%	41%	47%
	GDSLSWLLRLLN-N389
127	anti-hHER2-HC-E388-	8.0	7.7%; 11%	36%; 36%	56%; 52%
	GDSLSWLLRLLN-N389
121	anti-hHER2-HC-T359-		52%	37%	11%
	GDSLSWLLRLLN-K360
127	anti-hHER2-HC-E388-	9.0	12%	31%	57%
	GDSLSWLLRLLN-N389
121	anti-hHER2-HC-T359-		32%	46%	23%
	GDSLSWLLRLLN-K360
127	anti-hHER2-HC-E388-	10.0	100%	0%	0%
	GDSLSWLLRLLN-N389
121	anti-hHER2-HC-T359-		53%	36%	11%
	GDSLSWLLRLLN-K360

The HPLC results indicate that the pH range 8 to 9 is optimal for the conjugation of CoA-MC-MMAF to peptide-tagged Trastuzumab. In this pH range, the lowest amount of uncoupled antibody (DAR=0) and the highest amount of bi-conjugated ADC (DAR=2) could be detected by HPLC. Furthermore, plotting the percentage of ADC with a DAR of 2 against the pH (FIG. 12) indicates that the pH optimum is independent of the insertion site of the S6 tag for the two sites tested.

Example 14. Optimization of Labeling Reaction as a Function of Enzyme Concentration

To test the amount of Sfp required for efficient enzymatic conjugation, 2.5 μM of anti-hHER2-HC-E388-GDSLSWLLRLLN-N389 (SEQ ID NO: 127) was incubated at 370° C. for 16 hours with 50 μM CoA-MC-MMAF in 50 mM HEPES buffer (pH 7.5) supplemented with 10 mM MgCl₂ in the presence of no Sfp enzyme or 0.1, 0.25, 0.5, 1, 2.5, 5 or 10 μM Sfp enzyme. After 16 hours, aliquots of the reaction were analyzed by ESI-MS. For Sfp concentrations of 0.1 μM, mainly non-conjugated modified antibody is detectable by ESI-MS (FIG. 13A). Quantitative conjugation was obtained for all Sfp concentrations equal (FIG. 13B) or greater than 0.25 μM, such as 0.5 μM of Sfp (FIG. 13C).

Example 15. Optimization of Labeling Reaction as a Function of CoA Analog

To determine the minimal concentration of CoA substrate that would be required for quantitative labeling of an peptide-tagged IgG1 antibody, 2.5 μM anti-hHER2-HC-E388-GDSLSWLLRLLN-N389 was incubated with 0.25 μM or 1.0 μM Sfp in 75 mM Tris buffer (pH 8.0) containing 12.5 mM MgCl₂ and supplemented with CoA-MC-MMAF at the following concentrations: 2.5, 5, 7.5, 10, 15, 25, and 50 μM. The reaction was allowed to proceed for 13 hours at 23° C. and then quenched with 30 μL of 4% (v/v) trifluoroacetic acid (TFA). According to HPLC analysis (FIGS. 14A and 14B, Table 16), nearly quantitative antibody conjugation was achieved for all CoA-MC-MMAF concentrations equal or higher than 7.5 μM. The degree of labeling was almost independent on the Sfp concentration, with 86% DAR 2 species observed at 0.25 μM Sfp and 92% DAR 2 species observed at 1.0 μM Sfp.

TABLE 16
HPLC results of labeling reactions
as a function of CoA concentration:
	Retention time
CoA-MC-		4.9 min	5.3 min	5.7 min
MMAF (μM)	Sfp (μM)	DAR = 0	DAR = 1	DAR = 2
50	0.25	3.8%	7.1%	89%
25	0.25	3.7%	7.0%	89%
15	0.25	3.2%	6.9%	90%
10	0.25	3.9%	7.2%	89%
7.5	0.25	5.0%	8.6%	86%
5	0.25	5.7%	20.5%	74%
2.5	0.25	28%	48.3%	24%
50	1.0	—	7.1%	93%
25	1.0	—	6.3%	94%
15	1.0	—	5.7%	94%
10	1.0	—	5.7%	94%
7.5	1.0	1.0%	6.7%	92%
5	1.0	2.8%	24%	73%
2.5	1.0	31%	48%	21%

To determine the aggregation state of the anti-hHER2-HC-E388-GDS-MC-MMAF-LSWLLRLLN-N389 immunoconjugate, 5.6 mg of anti-hHER2-HC-E388-GDSLSWLLRLLN-N389 (2.5 μM) were reacted with 40 M CoA-MC-MMAF in the presence of 1 M Sfp in 50 mM HEPES buffer (pH 7.5) supplemented with 10 mM MgCl₂. After incubation at 23° C. for 3 days, the reaction mixture was purified on a Sephacryl 100-HR size-exclusion column (Sigma). After confirming quantitative conjugation by ESI-MS (observed mass, 51786.40 Da; expected mass immunoconjugate, 51791 Da; expected mass unmodified antibody, 50525 Da), the quaternary structure of the respective ADC was analyzed on a Tricorn S200 column (Agilent). The ADC was primarily monomeric (98%) and contained trace amounts of an oligomerized species (2%).

Example 16. Thermal Stability of S6 Antibodies and ADCs

To examine the thermal stability of peptide-tagged immunoconjugates, purified ADC samples were measured by differential scanning fluorometry (DSF) (Table 17) or differential scanning calorimetry (DSC) (Table 18). Samples were diluted to a final concentration of 0.25 mg/mL (1.67 μM) in PBS, pH 7.4. For DSF, SYPRO Orange gel stain (Sigma) was added to a final concentration of 5× as the tracer to indicate thermal unfolding of the ADCs. Samples were heated with 20 fluorescence scans/degree in a Lightcycler (Roche) instrument. For DSC, thermal unfolding was monitored by measuring heat capacity as temperature was increased at a rate of 1 degree Celsius per min in a MicroCal VP-DSC instrument. Melting temperatures were calculated using in the respective controller software packages assuming a 3-state model.

As described previously (Wakankar et al. Bioconjugate Chem. 2010, 21, 1588-1595), unmodified trastuzumab exhibits two transitions. The transitions were observed at 69.7 and 81.1 degrees Celsius by DSF and 72.3 and 81.0 degrees Celsius by DSC. Similar to the unmodified antibody, most CoA-MC-MMAF immunoconjugates exhibit two transitions although with different amplitudes (FIG. 15). DSF and DSC measurements of thermal melting points agree well although DSF reports a roughly 2 degree lower first transition. Generally, most engineered, non-conjugated antibodies and the respective peptide-tagged ADCs show little destabilization as compared to the wild-type antibody anti-hHER2.

TABLE 17
Thermal stability as measured by DSF. ΔTm values are relative to unmodified anti-hHER2 antibody.
	Sample (whole antibody tested, the name
	represents part of the HC or LC that
SEQ	contains the peptide tag, the paired
ID NO	wildtype chain is not listed)	Tm1/° C.	Tm2/° C.	ΔTm1/° C.	ΔTm2/° C.
93/25	anti-hHER2	69.7	81.2
94	anti-hHER2-HC-V2-GDSLSWLLRLLN-Q3	70.8	—	1.1	—
95	anti-hHER2-HC-V2-DSLEFIASKLA-Q3	70.0	78.0	0.3	−3.1
102	anti-hHER2-HC-S132D-K133S-S134L-T135E-	69.3	—	−0.4	—
	S136F-G137I-G138A-T139S-A140K-A141L-
	L142A
103	anti-hHER2-HC-K133G-S134D-T135S-S136L-	68.4	81.0	−1.3	−0.1
	G137S-G138W-LLRLLN-T139
109	anti-hHER2-HC-P189G-S190D-S191-S192L-	69.6; 69.3	81.0; 80.6	−0.1; −0.4	−0.1; −0.5
	L193S-G194W-T195L
110	anti-hHER2-HC-P189G-S190D-S191-S192L-	69.4	80.7	−0.3	−0.4
	L193S-G194W-T195L-LRLLN-Q196
112	anti-hHER2-HC-P189D-S190-S191L-S192E-	69.4	78.6	−0.3	−2.5
	L193F-G194I-T195A-Q196S-T197K-Y198L-
	I199A
113	anti-hHER2-HC-S190G-S191D-S192-L193-	68.1	78.1	−1.7	−3.1
	G194S-T195W-Q196L-T197L-RLLN-Y198
114	anti-hHER2-HC-S190D-S191-S192L-L193E-	67.8	—	−1.9	—
	G194F-T195I-Q196A-T197S-Y198K-I199L
115	anti-hHER2-HC-S190D-S191-S192L-L193E-	67.1	—	−2.6	—
	G194F-T195I-Q196A-T197S-Y198K-I199L-
	C200A
116	anti-hHER2-HC-S191D-S192-L193-G194E-	69.3	—	−0.4	—
	T195F-Q196I-T197A-Y198S-I199K
121	anti-hHER2-HC-T359-GDSLSWLLRLLN-K360	70.1; 70.3	81.7; 81.7	0.3; 0.5	0.6; 0.6
	anti-hHER2-HC-T359-GDS-ppan-MC-MMAF-	68.4; 68.6	81.5; 81.4	−1.3; −1.2	0.4; 0.3
	LSWLLRLLN-K360
122	anti-hHER2-HC-T359-DSLEFIASKLA-K360	70.1	81.7	0.3	0.6
127	anti-hHER2-HC-E388-GDSLSWLLRLLN-N389	66.6	81.5	−3.1	0.4
	anti-hHER2-HC-E388-GDS-ppan-MC-MMAF-	66.3	81.0	−3.4	−0.1
	LSWLLRLLN-N389
	anti-hHER2-HC-E388-GDS-ppan-MC-ValCit-	66.7	80.9	−3.0	−0.2
	PABC-MMAF-LSWLLRLLN-N389
131	anti-hHER2-HC-E388-DSLEFIASK-N389	69.4	81.6	−0.3	0.5
130	anti-hHER2-HC-E388-DSLEFIASKL-N389	68.9	81.5	−0.9	0.4
129	anti-hHER2-HC-E388-DSLEFIASKLA-N389	69.3	81.6	−0.4	0.5
135	anti-hHER2-HC-L398D-D399S-S400L-D401E-	49.2	81.2	−20.6	0.1
	G402F-S403I-F404A-F405S-L406K-Y407L-
	S408A
141	anti-hHER2-HC-K447-DSLEFIASKLA	70.1	81.0	0.4	−0.1
27	anti-hHER2-LC-I2-DSLEFIASKLA-Q3	70.0	78.8	0.2	−2.3
29	anti-hHER2-LC-C214-DSLEFIASKLA	69.7	80.9	0.0	−0.2

TABLE 18
Thermal stability as measured by DSC. ΔTm values are relative
to unmodified anti-hHER2 antibody.
SEQ ID No		Tm1/	Tm2/	Tm3/
(antibody)	Sample	° C.	° C.	° C.	ΔTm1/° C.	ΔTm2/° C.
93/25	anti-hHER2	72.3; 72.3	80.9; 81.0	—
95	anti-hHER2-HC-V2-DSLEFIASKLA-	72.3	77.9	83.3	0.1	−3.1
	Q3
	anti-hHER2-HC-V2-GDS-ppan-MC-	70.4	82.6	—	−1.9	1.7
	MMAF-LSWLLRLLN-Q3
102	anti-hHER2-HC-S132D-K133S-	70.3	76.2	83.3	−2.0	−4.8
	S134L-T135E-S136F-G137I-G138A-
	T139S-A140K-A141L-L142A
103	anti-hHER2-HC-K133G-S134D-	69.7	80.5	—	−2.6	−0.5
	T135S-S136L-G137S-G138W-
	LLRLLN-T139
109	anti-hHER2-HC-P189G-S190D-	72.8; 70.7	80.1; 79.9	—	0.5; −1.6	−0.9; −1.1
	S191-S192L-L193S-G194W-T195L
110	anti-hHER2-HC-P189G-S190D-	71.2	80.0	—	−1.1	−1.0
	S191-S192L-L193S-G194W-T195L-
	LRLLN-Q196
121	anti-hHER2-HC-T359-	70.4; 70.6	80.9; 80.6	—	−1.9; −1.6	−0.1; −0.4
	GDSLSWLLRLLN-K360
	anti-hHER2-HC-T359-GDS-ppan-	68.7	80.6	—	−3.6	−0.4
	MC-MMAF-LSWLLRLLN-K360
	anti-hHER2-HC-T359-GDS-ppan-	68.8	80.4	—	−3.5	−0.6
	MC-MMAF-LSWLLRLLN-K360
122	anti-hHER2-HC-T359-	71.8	80.9	—	−0.5	−0.1
	DSLEFIASKLA-K360
	anti-hHER2-HC-E388-GDS-ppan-	67.0	80.2	—	−5.3	−0.8
	MC-MMAF-LSWLLRLLN-N389
	anti-hHER2-HC-E388-GDS-ppan-	66.0	80.1	—	−6.3	−0.9
	MC-ValCit-PABC-MMAF-
	LSWLLRLLN-N389
131	anti-hHER2-HC-E388-DSLEFIASK-	71.2	80.8	—	−1.0	−0.2
	N389
130	anti-hHER2-HC-E388-	70.7	80.8	—	−1.6	−0.2
	DSLEFIASKL-N389
	anti-hHER2-HC-E388-DS-ppan-MC-	69.9	80.2	—	−2.3	−0.8
	MMAF-LEFIASKL-N389
129	anti-hHER2-HC-E388-	71.1	80.8	—	−1.2	−0.2
	DSLEFIASKLA-N389
	anti-hHER2-HC-E388-DS-ppan-MC-	70.2	80.3	—	−2.1	−0.7
	MMAF-LEFIASKLA-N389
135	anti-hHER2-HC-L398D-D399S-	—	81.0	—	—	0.1
	S400L-D401E-G402F-S403I-F404A-
	F405S-L406K-Y407L-S408A
141	anti-hHER2-HC-K447-	72.7	81.0	—	0.4	0.1
	DSLEFIASKLA
29	anti-hHER2-LC-C214-	71.6	81.1	—	−0.7	0.1
	DSLEFIASKLA

Example 17. Pharmacokinetic Properties of Peptide-Tagged ADCs

To check the in vivo stability of two peptide-tagged Trastuzumab ADCs with MMAF payload (DAR of 2), we conducted a pharmacokinetic (PK) study in mice. Anti-hHER2-HC-T359-GDS-ppan-MC-MMAF-LSWLLRLLN-K360 and anti-hHER2-HC-E388-GDS-ppan-MC-MMAF-LSWLLRLLN-N389 were injected i.v. into 3 mice using ADC concentrations of 1.0 mg/kg. 10 samples were collected at 0.2, 1, 3, 7, 24, 48, 96, 168, 240, and 336 hours. The plasma titers of both ADCs were monitored up to two weeks using ELISA assays with anti-human IgG as well as anti-MMAF antibodies and ELISA plates coated with truncated human HER2 (extracellular domains 3-4). The ELISA results were then compared to PK studies of an unmodified Trastuzumab IgG1. While anti-hHER2-HC-T359-GDS-ppan-MC-MMAF-LSWLLRLLN-K360 showed a fast decay in mice in comparison to unmodified trastuzumab, anti-hHER2-HC-E388-GDS-ppan-MC-MMAF-LSWLLRLLN-N389 exhibited a serum clearance similar to unmodified trastuzumab over a two week time period (FIG. 16). For both ADCs, anti-hlgG and anti-MMAF titers track each other, suggesting that little if any drug is lost during the in vivo exposure in mice.

Example 18. In Vitro Potency of Peptide-Tagged ADCs

In vitro cell-killing assays of peptide-tagged ADCs were carried out with the HER2-expressing MDA-231 cell line. ADCs with DAR=2 were prepared as described in Example 6 by reacting anti-hHER2-HC-T359-GDSLSWLLRLLN-K360 (SEQ ID NO:121) and anti-hHER2-HC-E388-GDSLSWLLRLLN-N389 (SEQ ID NO:127) with non-cleavable MC-MMAF and cleavable MC-ValCit-PABC-MMAF (Example 12). The in vitro potency of the corresponding ADCs, anti-hHER2-HC-T359-GDS-ppan-MC-MMAF-LSWLLRLLN-K360, anti-hHER2-HC-E388-GDS-ppan-MC-M MAF-LSWLLRLLN-N389, anti-hH ER2-HC-T359-GDS-ppan-MC-ValCit-PABC-MMAF-LSWLLRLLN-K360, and anti-hHER2-HC-E388-GDS-ppan-MC-ValCit-PABC-MMAF-LSWLLRLLN-N389 were tested in PC3-31 (high copy number of HER2) and PC3 (low copy number of HER2) ErbB2 engineered cells. Regarding the PC3-31 cell line, all peptide-tagged ADCs revealed potent cytotoxic activities with inhibitory concentrations (IC₅₀) in the picomolar or sub-picomolar range. In contrast, the corresponding IC₅₀ values on PC3 cells were equal or higher than 23 nM. The results are summarized in Table 19 and FIG. 17 and indicate that all four conjugates are highly potent ADCs and kill HER2/neu-positive cells in an antigen-dependent manner.

TABLE 19
In vitro potency of S6-tag conjugated MMAF immunoconjugates.
	IC50 value
ADC	PC3-31 cell line	PC3 cell line
anti-hHER2-HC-T359-GDS-ppan-MC-	1.9 ng/mL; 13 pM	>9000 ng/mL; >60000 pM
MMAF-LSWLLRLLN-K360
anti-hHER2-HC-E388-GDS-ppan-MC-	5.8 ng/mL; 39 pM	>9000 ng/mL; >60000 pM
MMAF-LSWLLRLLN-N389
anti-hHER2-HC-T359-GDS-ppan-MC-	3.2 ng/mL; 21 pM	3400 ng/mL; 23000 pM
ValCit-PABC-MMAF-LSWLLRLLN-K360
anti-hHER2-HC-E388-GDS-ppan-MC-	0.01 ng/mL; 0.07 pM	>9000 ng/mL; >60000 pM
ValCit-PABC-MMAF-LSWLLRLLN-N389

Example 19. Labeling of Peptide-Tagged IgGs with a Cytotoxic CoA Analog in Cell Culture Media

The bioorthogonality of PPTase-catalyzed 4′-phosphopantetheinylation enables the site-specific labeling of peptide-tagged IgGs in complex mixtures such as conditioned medium. Following the secretion of the peptide-tagged antibody, exogenously added PPTase (such as Sfp) and drug-CoA substrate (such as CoA-MC-MMAF) lead to the formation of homogeneous ADCs, which can be purified in a single step using protein A affinity chromatography.

For example, HEK293F cells are transfected with plasmid DNA coding for IgG1 heavy chain with S6 tag insertion in the CH3 domain and plasmid DNA coding for unmodified kappa light chain. The 40 mL HEK293F suspension culture is cultured for five days at 37° C. After harvesting by centrifugation at 2000 rpm for 10 minutes, the medium supernatant is supplemented to a final concentration of 40 μM of CoA-MC-MMAF, 10 mM of MgCl₂, and 50 mM of HEPES (pH 7.5). The medium supernatant is then split into two 20 mL aliquots. Recombinantly produced Sfp enzyme (5 μM) is added to one of the aliquots (see Table 20, Experiment #2) and the enzymatic reaction is allowed to proceed for 24 hours at room temperature.

TABLE 20
In-medium labeling scheme.
	Experiment #	1	2
	Addition of CoA-MC-MMAF (40 μM) to	X	X
	medium supernatant
	Addition of Sfp (5 μM) to medium supernatant		X

Antibody purification is carried out using Protein A Sepharose Fast Flow columns with 0.25 mL bed volume for each experiment. After equilibration with PBS, the medium supernatants are applied to the columns at a flow rate of about 1 mL/min and the flowthrough is collected. Following washing with 20 column volumes of PBS, bound antibody is eluted using 6 column volumes of 0.1 M sodium acetate (pH 3.0) followed by immediate neutralization with 1 M Tris/HCl (pH 10) to reach a final pH of about 8. The purity of the eluates is assessed by SDS-PAGE analysis and the antibody yield is determined by the Bradford method. Finally, Sfp-dependent in-medium ADC formation is confirmed by ESI-MS and HPLC analysis of the protein A eluates.

Example 20. In Vitro Labeling of Peptide-Tagged IgGs with Acetyl-CoA and Subsequent Conjugation with a Cytotoxin

The principle of the preparation of immune conjugates via acetyl-CoA is a three-step chemoenzymatic conjugation protocol in which the acetyl moiety serves as a protecting group for the reactive thiol group of CoA. Furthermore, although PPTases such as Sfp tolerate large CoA analogs (e.g. peptidyl-CoA) for catalysis, the catalytic efficiency (k_cat/K_M) is significantly reduced compared to CoA itself (see, Sieber et al., J. Am. Chem. Soc. 125: 10862-10866 (2003)). Hence, it is expected that the small acetyl group ensures similar enzyme kinetics as seen for the native CoA substrate.

For example, covalent conjugation of the acetylated ppan moiety to a peptide-tagged IgG antibody is carried out as described in Example 6 using acetyl-CoA instead of CoA-MC-MMAF. After confirming quantitative conjugation by ESI-MS, the conjugate is dialyzed into Reaction Buffer (0.1 M sodium phosphate (pH 7.2), 0.15 M NaCl). The dialyzed conjugate is concentrated to about 5 mg/mL and supplemented with 10% (v/v) of Deacetylation Solution containing Reaction Buffer (pH 7.2) with 0.5 M hydroxylamine and 25 mM EDTA. This chemical thioester cleavage reaction is allowed to proceed for 3 hours at room temperature, followed by buffer-exchanging the reaction mixture into Reaction Buffer (pH 7.2) supplemented with 10 mM EDTA. After confirmation of quantitative deacetylation by ESI-MS, the deprotected ppan moiety is then conjugated with 15 equivalents of thiol-reactive maleimide-MC-MMAF (0.5 mM) for 1 hour at room temperature. The reaction is quenched by buffer-exchange into PBS. Finally, quantitative ADC formation is confirmed by ESI-MS and HPLC analysis.

Example 21. Labeling of Peptide-Tagged IgGs with Acetyl-CoA in Cell Culture Media and Subsequent Conjugation with a Cytotoxin

The bioorthogonality of PPTase-catalyzed generation of homogeneous ADCs allows the site-specific labeling of IgGs in cell culture media (see Example 19). Instead of directly attaching the cytotoxic drug molecule to the antibody, it is also possible to carry out in-medium labeling with acetyl-CoA for ADC generation via a three-step chemoenzymatic conjugation process. The small acetyl-CoA analog allows conjugation reactions with improved catalytic efficiency (k_cat/K_M) as compared to large cytotoxic CoA analogs, thereby significantly decreasing the amount of enzyme needed for quantitative conjugation. Furthermore, for process development, it would be advantageous to perform labeling reactions in large culture volumes with non-toxic compounds. The peptide-tagged IgG conjugated with the acetyl-ppan moiety can be purified in a single step using protein A affinity chromatography. In order to prepare the immune conjugate starting from the purified acetyl-ppan-conjugated antibody, the two subsequent chemical reactions are carried out as described in Example 20.

Example 22. Labeling of Peptide-Tagged IgGs with Acetyl-CoA or Bioorthogonal CoA Analogs in Cell Culture Media and Subsequent Conjugation with a Cytotoxin

The bioorthogonality of PPTase-catalyzed generation of homogeneous ADCs also allows the site-specific labeling of IgGs in cell culture media (see Example 19). Instead of directly attaching the cytotoxic drug molecule to the antibody, it is also possible to carry out in-medium labeling with acetyl-CoA for ADC generation via a three-step chemoenzymatic conjugation process. The small acetyl-CoA analog allows conjugation reactions with improved catalytic efficiency (k_cat/K_M) as compared to large cytotoxic CoA analogs, thereby significantly decreasing the amount of enzyme needed for quantitative conjugation. Furthermore, for process development, it would be advantageous to perform labeling reactions in large culture volumes with non-toxic compounds. The peptide-tagged IgG conjugated with the acetyl-ppan moiety can be purified in a single step using protein A affinity chromatography. In order to prepare the immune conjugate starting from the purified acetyl-ppan-conjugated antibody, the two subsequent chemical reactions are carried out as described in Example 20.

Alternatively, instead of using acetyl-CoA, in-medium labeling can also be performed with CoA analogs covalently linked to bioorthogonal groups, such as azido, alkene, alkyne, ketone, or aldehyde moieties. Following in-medium PPTase catalysis, the peptide-tagged antibody with the ppan-bound bioorthogonal group is purified to homogeneity using protein A affinity chromatography. As the last step of this two-step chemoenzymatic labeling strategy for ADC preparation, the reaction with the complementary bioorthogonal group leads to the site-specific attachment of the drug moiety to the antibody.

Example 23. Production and Properties of ADCs with a DAR of 4

ADCs with a DAR of 4 can be generated by inserting/grafting multiple peptide tags into an antibody, which are substrates of the same enzyme (FIG. 18A). For instance, both the ybbR- and the S6-tags are recognized as substrates by the PPTase Sfp. Conversely, labeling of antibodies with multiple different ligands is achieved by inserting/grafting peptide tags into an antibody, which are substrates of two different PPTases. For example, the A1 tag is exclusively recognized by the AcpS PPTase, while the S6 tag is preferentially modified by the Sfp PPTase. Furthermore, immunoconjugates with higher DARs (e.g., DARs of 6, 8, 10, 12, etc.) may be generated by adding additional tags. Enzymatic conjugation can also be combined with other labeling strategies such as site-specific conjugation through cysteine, pyrrolysine, pyrroline-carboxy-lysine, and unnatural amino acids as well as chemoselective methods such as Lys, Cys or Tyr selective chemistries.

In order to prepare homogeneous ADCs with a DAR of 4, two peptide tags were incorporated into the heavy chain of Trastuzumab IgG1, namely an S6 tag into the V_H domain and a ybbR tag into the CH3 domain (anti-hHER2-HC-V2-GDSLSWLLRLLN-Q3-E388-DSLEFIASKLA-N389). This dual-tagged antibody was expressed in HEK293F cells on a 50 mL scale. Following transfection, the HEK293F cells were cultured for five days before harvest by centrifugation at 3400 rpm for 15 min. The resulting medium supernatant was filtered through a 0.22-μm-pore-size filter. Purification was accomplished using a Protein A Sepharose Fast Flow column (GE Healthcare) with a bed volume of 0.6 mL, which was equilibrated with 20 column volumes of PBS. The filtered medium supernatant was loaded at a flow rate of about 1 mL/min. After washing the column with 20 column volumes of PBS, the peptide-tagged antibody was eluted with 5 column volumes of 0.1 M sodium acetate (pH 3.0) followed by immediate neutralization with 1 M Tris/HCl (pH 10) to a final pH of about 8. According to the Bradford method, the total yield was 8 mg of purified antibody per liter culture. The purity of the antibody construct was assessed by SDS-gel electrophoresis. After concentration with a 30 kDa cut-off Amicon Ultra Centrifugal Filter Unit, 2.5 μM anti-hHER2-HC-V2-GDSLSWLLRLLN-Q3-E388-DSLEFIASKLA-N389 was incubated with 50 μM CoA-MC-MMAF, 1 μM Sfp, 12.5 mM MgCl₂, in 75 mM HEPES buffer, pH 7.5, at 23° C. for 16 hours to enzymatically label the dual-tagged antibody with four drug molecules.

The deconvoluted mass spectrum of the reduced and deglycosylated antibody construct confirmed the covalent attachment of two ppan-MC-MMAF units to each heavy chain of Trastuzumab (observed mass, 54223.20 Da; expected mass, 54231 Da). Neither uncoupled (expected mass, 51700 Da) nor mono-labeled species (expected mass, 52966 Da) were observed by ESI-MS. Near quantitative conversion to an ADC with a DAR of 4 (95% according to peak area integration) was further confirmed by HPLC analysis (FIG. 18B).

Example 24. Generation of a Comprehensive Library of Peptide-Tagged ADCs Using the Protein Expression and Purification Platform (PEPP)

Based on the examination of the crystal structure of human IgG1 B12 antibody as well as surface accessibility calculations (Example 1), a library of 268 peptide-tagged trastuzumab IgG1 constructs was proposed. Systematic insertion of S6 and ybbR tag sequences into the constant regions was accomplished by standard molecular biology methods using the oligonucleotides listed in Table 8. Sequence confirmed plasmids harboring either the heavy or light chain genes of trastuzumab were used for transient co-transfection of 293 Freestyle™ cells according to the PEI method (Meissner et al., 2001). Culturing of each library member in a volume of 35 mL of Freestyle™ expression media (Invitrogen) for five days at 37° C. under 5% CO₂ was carried out on the PEPP system (Gonzalez R, Jennings L L, Knuth M, Orth A P, Klock H E, Ou W, Feuerhelm J, Hull M V, Koesema E, Wang Y, Zhang J, Wu C, Cho C Y, Su A1, Batalov S, Chen H, Johnson K, Laffitte B, Nguyen D G, Snyder E Y, Schultz P G, Harris J L, Lesley S A. Proc Natl Acad Sci USA. 2010, 107(8):3552-7). Following automated cell harvest, the same system was used to purify the library of peptide-tagged antibodies by Protein A affinity chromatography. Briefly, after 0.22 μm filtration of the medium supernatant, each filtrate was loaded onto a Protein A affinity column containing 0.2 mL of settled resin at an approximate flow rate of 1 mL/min. The column was then washed with 20 column volumes of PBS followed by elution with 5 column volumes of 0.1 M sodium acetate, pH 3.0. The eluate was immediately neutralized with 25% (v/v) of 1 M Tris-HCl (pH 8.0).

To determine the yield of the Protein A-purified antibodies (Table 21), protein concentrations of the eluates were measured in duplicate on a ND-1000 UV-Vis spectrophotometer (NanoDrop Technologies) at 280 nm using the preset molar extinction coefficient for IgG molecules. After concentrating the peptide-tagged antibodies using 30 kDa cut-off Amicon Ultra-0.5 centrifugal filter devices (EMD Millipore), enzyme-catalyzed conjugation reactions were performed for about 16 hours at 20° C. with 2.5 μM of peptide-tagged antibody, IM of CoA-MC-MMAF substrate, and 1 μM of Sfp enzyme in Tris-HCl buffer (75 mM, pH 8.0) supplemented with 12.5 mM of MgCl₂ and 20 mM of NaCl. The degree of labeling of the peptide-tagged antibodies was quantified by analytical HPLC on a PLRP-S column (4000 Å, 5 M, 50×4.6 mm, Agilent Technologies) with a 6-min linear gradient of 25-50% acetonitrile in water containing 0.1% trifluoroacetic acid. The corresponding uncoupled antibodies were used as negative controls (Table 21). After concentrating the antibody conjugates using Amicon Ultra-4 centrifugal filter devices (EMD Millipore), the enzymatic reactions were further analyzed by mass spectrometry on an Agilent 6520 Q-TOF instrument (Agilent Technologies). Deconvoluted ESI-MS spectra of the reduced and deglycosylated antibody conjugates were obtained by using 10 μL of concentrated reaction mixture (Table 21).

The peptide-tagged ADC constructs were further purified by Ni-NTA (nickel-nitrilotriacetic acid) chromatography to remove Sfp enzyme and excess CoA-MC-MMAF substrate. After equilibration of the Ni-NTA columns (0.2 mL bed volume each) with PBS, the concentrated conjugation samples were loaded onto the columns at an approximate flow rate of 1 mL/min. Next, the columns were washed with 20 column volumes of PBS followed by elution with 5 column volumes of Tris-HCl buffer (50 mM, pH 8.0) supplemented with 250 mM imidazole and 300 mM NaCl. According to Bradford assay, the recovery of the peptide-tagged ADCs averaged 39% of the Protein A-purified starting material. The PEPP system was then used to buffer-exchange each sample into PBS using NAP-10 Columns (GE Healthcare). Following buffer-exchange, the peptide-tagged ADCs were concentrated using Amicon Ultra-4 centrifugal filter devices (EMD Millipore), and the concentrations of the conjugates were adjusted by dilution with PBS. Adjusted to the appropriate concentration, the ADC samples were further characterized by DSF (differential scanning fluorimetry), LC90 (LabChip 90), AnSEC (analytical size-exclusion chromatography), and in vitro potency assays (data not shown).

Of the originally planned 268 peptide-tagged trastuzumab antibodies, expression was tested for 183 constructs (68%). The expression levels exhibit a great variability ranging from 0 to more than 30 mg of antibody per liter culture (Table 21), with the average being 16 mg (±8 mg standard deviation) of antibody per liter culture. Furthermore, the expression levels correlate with the position of the peptide tag insertion with the 46 light chain constructs (13±8 mg per liter culture) exhibiting lower average expressions levels than the 137 heavy chain constructs (17±8 mg per liter culture). The expression levels also depend on the type of peptide tag: 95 antibody constructs with ybbR tag insertions on average show higher expression levels (19±7 mg per liter culture) than the corresponding 88 constructs with S6 tag insertions (13±8 mg per liter culture). The opposite trend is observed for the conjugation efficiencies based on reverse-phase HPLC analysis: 44 (72%) peptide-tagged constructs with near quantitative ADC formation (drug-to-antibody ratio >1.9) are based on insertion of the S6 peptide sequence, while only 17 (28%) ybbR-tagged antibodies displayed near quantitative conversion to the corresponding ADC.

On average, heavy chain constructs were conjugated more efficiently than peptide insertions in the light chain: 19% (8 out of 43) of the constructs with peptide tag insertions in the light chain revealed DARs of at least 1.9 while 40% (53 out of 131) of the constructs with peptide tag insertions in the heavy chain could be conjugated with the same efficiency. The best overall conjugation efficiencies are displayed by peptide tag insertions in several loop regions of the CH1 domain. Overall, of the 183 expressed peptide-tagged antibodies, conjugation efficiencies of 174 constructs could be determined with 61 (35%) constructs yielding drug-to-antibody ratios (DARs) of 1.9 or higher.

Thermostability of the resulting ADCs depends on the site of peptide tag insertion. For instance, most peptide tag insertions in the CH2 domain lead to a significant decrease of the lowest observed thermal transition (Tm1) according to DSF (differential scanning fluorimetry) measurements as will be illustrated in more detail in Example 25. Little aggregation or antibody oligomers were observed for 135 (87%) out of 156 peptide-tagged ADCs that were examined by analytical size-exclusion chromatography (>90% monomeric species). The in vitro potency of the peptide-tagged ADCs correlated as expected with their degree of labeling. Although a large number of peptide-tagged ADCs with preferred properties can be generated, the data also illustrate that expression yield, thermal stability, conjugation efficiency and other properties are greatly affected by the choice of tag insertion site.

TABLE 21
ADC preparation and characterization of material prepared on PEPP system.
		Anti-
Anti-		body		Expected	Expected
body		yieldb		mass anti-	mass	Observed
SEQ ID	ADC namea	(mg/L)	DARc	bodyd (Da)	ADCe (Da)	massf (Da)
SEQ ID	anti-hHER2-HC-A118-	10	2.0	50525.0	51790.5	51792.7
NO: 150	GDS-ppan-MC-MMAF-					51814.6
	LSWLLRLLN-S119
SEQ ID	anti-hHER2-HC-S119-	12	2.0	50525.0	51790.5	51792.4
NO: 151	GDS-ppan-MC-MMAF-
	LSWLLRLLN-T120
SEQ ID	anti-hHER2-HC-T120-	11	2.0	50525.0	51790.5	51797.2
NO: 152	GDS-ppan-MC-MMAF-
	LSWLLRLLN-K121
SEQ ID	anti-hHER2-HC-T135-	24	2.0	50525.0	51790.5	51792.8
NO: 157	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S136
SEQ ID	anti-hHER2-HC-S136-	20	2.0	50525.0	51790.5	51792.0
NO: 158	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G137
SEQ ID	anti-hHER2-HC-G138-	14	2.0	50525.0	51790.5	51792.3
NO: 160	GDS-ppan-MC-MMAF-					51814.6
	LSWLLRLLN-T139
SEQ ID	anti-hHER2-HC-E152-	3	0.2	50525.0	51790.5	50528.4
NO: 161	GDS-ppan-MC-MMAF-					51794.8
	LSWLLRLLN-P153
SEQ ID	anti-hHER2-HC-P153-	0	N/A	50525.0	51790.5	N/A
NO: 162	GDS-ppan-MC-MMAF-
	LSWLLRLLN-V154
SEQ ID	anti-hHER2-HC-N159-	0	N/A	50525.0	51790.5	N/A
NO: 163	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S160
SEQ ID	anti-hHER2-HC-S160-	10	1.4	50525.0	51790.5	51792.0
NO: 164	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G161
SEQ ID	anti-hHER2-HC-G161-	9	1.3	50525.0	51790.5	51798.0
NO: 165	GDS-ppan-MC-MMAF-					50529.2
	LSWLLRLLN-A162
SEQ ID	anti-hHER2-HC-A162-	15	2.0	50525.0	51790.5	51798.4
NO: 166	GDS-ppan-MC-MMAF-
	LSWLLRLLN-L163
SEQ ID	anti-hHER2-HC-T164-	22	2.0	50525.0	51790.5	51796.8
NO: 168	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S165
SEQ ID	anti-hHER2-HC-S165-	15	2.0	50525.0	51790.5	51794.4
NO: 169	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G166
SEQ ID	anti-hHER2-HC-P171-	3	N/A	50525.0	51790.5	N/A
NO: 170	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A172
SEQ ID	anti-hHER2-HC-S176-	8	1.9	50525.0	51790.5	51791.7
NO: 171	GDS-ppan-MC-MMAF-					51812.9
	LSWLLRLLN-S177
SEQ ID	anti-hHER2-HC-P189-	24	1.5	50525.0	51790.5	51792.4
NO: 173	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S190
SEQ ID	anti-hHER2-HC-S191-	21	2.0	50525.0	51790.5	51792.0
NO: 175	GDS-ppan-MC-MMAF-					51814.0
	LSWLLRLLN-S192
SEQ ID	anti-hHER2-HC-S192-	32	2.0	50525.0	51790.5	51792.0
NO: 176	GDS-ppan-MC-MMAF-					51813.7
	LSWLLRLLN-L193
SEQ ID	anti-hHER2-HC-L193-	18	2.0	50525.0	51790.5	51791.0
NO: 177	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G194
SEQ ID	anti-hHER2-HC-G194-	19	2.0	50525.0	51790.5	51796.8
NO: 178	GDS-ppan-MC-MMAF-
	LSWLLRLLN-T195
SEQ ID	anti-hHER2-HC-T195-	17	2.0	50525.0	51790.5	51800.0
NO: 179	GDS-ppan-MC-MMAF-					53918.8
	LSWLLRLLN-Q196
SEQ ID	anti-hHER2-HC-Q196-	23	1.9	50525.0	51790.5	51791.9
NO: 180	GDS-ppan-MC-MMAF-					51813.5
	LSWLLRLLN-T197
SEQ ID	anti-hHER2-HC-K205-	22	0.2	50525.0	51790.5	50526.7
NO: 181	GDS-ppan-MC-MMAF-					51792.6
	LSWLLRLLN-P206					50548.6
SEQ ID	anti-hHER2-HC-P206-	25	1.9	50525.0	51790.5	51792.1
NO: 182	GDS-ppan-MC-MMAF-					51813.9
	LSWLLRLLN-S207
SEQ ID	anti-hHER2-HC-A231-	35	2.0	50525.0	51790.5	51789.5
NO: 185	GDS-ppan-MC-MMAF-					51810.4
	LSWLLRLLN-P232
SEQ ID	anti-hHER2-HC-E233-	13	1.9	50525.0	51790.5	51789.5
NO: 187	GDS-ppan-MC-MMAF-					51770.4
	LSWLLRLLN-L234					51809.6
SEQ ID	anti-hHER2-HC-L235-	16	1.9	50525.0	51790.5	51790.1
NO: 189	GDS-ppan-MC-MMAF-					51811.8
	LSWLLRLLN-G236
SEQ ID	anti-hHER2-HC-P244-	12	0.8	50525.0	51790.5	50522.7
NO: 191	GDS-ppan-MC-MMAF-					51790.6
	LSWLLRLLN-P245					50545.4
SEQ ID	anti-hHER2-HC-I253-	23	1.9	50525.0	51790.5	51789.0
NO: 193	GDS-ppan-MC-MMAF-					51809.6
	LSWLLRLLN-S254
SEQ ID	anti-hHER2-HC-S254-	20	2.0	50525.0	51790.5	51789.5
NO: 194	GDS-ppan-MC-MMAF-					51810.5
	LSWLLRLLN-R255
SEQ ID	anti-hHER2-HC-R255-	25	2.0	50525.0	51790.5	51792.2
NO: 195	GDS-ppan-MC-MMAF-					51814.5
	LSWLLRLLN-T256
SEQ ID	anti-hHER2-HC-S267-	20	2.0	50525.0	51790.5	51789.2
NO: 198	GDS-ppan-MC-MMAF-					51810.1
	LSWLLRLLN-H268
SEQ ID	anti-hHER2-HC-H268-	10	2.0	50525.0	51790.5	51789.6
NO: 199	GDS-ppan-MC-MMAF-					51810.0
	LSWLLRLLN-E269
SEQ ID	anti-hHER2-HC-E269-	0	N/A	50525.0	51790.5	N/A
NO: 200	GDS-ppan-MC-MMAF-
	LSWLLRLLN-D270
SEQ ID	anti-hHER2-HC-D270-	18	2.0	50525.0	51790.5	51789.8
NO: 201	GDS-ppan-MC-MMAF-					51771.0
	LSWLLRLLN-P271					51811.2
SEQ ID	anti-hHER2-HC-P271-	8	2.0	50525.0	51790.5	51796.4
NO: 202	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E272
SEQ ID	anti-hHER2-HC-P291-	23	1.8	50525.0	51790.5	51789.8
NO: 206	GDS-ppan-MC-MMAF-					51811.3
	LSWLLRLLN-R292
SEQ ID	anti-hHER2-HC-T307-	4	n.d.	50525.0	51790.5	51793.6
NO: 207	GDS-ppan-MC-MMAF-					50526.4
	LSWLLRLLN-V308
SEQ ID	anti-hHER2-HC-L309-	10	n.d.	50525.0	51790.5	51795.6
NO: 209	GDS-ppan-MC-MMAF-					50530.8
	LSWLLRLLN-H310
SEQ ID	anti-hHER2-HC-N315-	13	0.9	50525.0	51790.5	51788.9
NO: 211	GDS-ppan-MC-MMAF-					50523.3
	LSWLLRLLN-G316					51810.4
SEQ ID	anti-hHER2-HC-G316-	7	0.8	50525.0	51790.5	50524.1
NO: 212	GDS-ppan-MC-MMAF-					51789.7
	LSWLLRLLN-K317					50545.9
SEQ ID	anti-hHER2-HC-A327-	14	0.5	50525.0	51790.5	51789.9
NO: 215	GDS-ppan-MC-MMAF-					50522.7
	LSWLLRLLN-L328
SEQ ID	anti-hHER2-HC-L328-	16	1.0	50525.0	51790.5	51789.8
NO: 216	GDS-ppan-MC-MMAF-					50523.2
	LSWLLRLLN-P329					51810.9
SEQ ID	anti-hHER2-HC-P329-	18	1.5	50525.0	51790.5	51790.1
NO: 217	GDS-ppan-MC-MMAF-					51811.9
	LSWLLRLLN-A330
SEQ ID	anti-hHER2-HC-A330-	9	1.7	50525.0	51790.5	51792.4
NO: 218	GDS-ppan-MC-MMAF-					50527.6
	LSWLLRLLN-P331
SEQ ID	anti-hHER2-HC-K340-	6	1.8	50525.0	51790.5	51792.4
NO: 220	GDS-ppan-MC-MMAF-					51604.8
	LSWLLRLLN-G341
SEQ ID	anti-hHER2-HC-G341-	26	1.9	50525.0	51790.5	51790.0
NO: 221	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q342
SEQ ID	anti-hHER2-HC-Q342-	0	N/A	50525.0	51790.5	N/A
NO: 222	GDS-ppan-MC-MMAF-
	LSWLLRLLN-P343
SEQ ID	anti-hHER2-HC-P343-	14	2.0	50525.0	51790.5	51792.2
NO: 223	GDS-ppan-MC-MMAF-					51809.3
	LSWLLRLLN-R344
SEQ ID	anti-hHER2-HC-R344-	16	2.0	50525.0	51790.5	51794.4
NO: 224	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E345
SEQ ID	anti-hHER2-HC-K360-	26	2.0	50525.0	51790.5	51796.8
NO: 229	GDS-ppan-MC-MMAF-
	LSWLLRLLN-N361
SEQ ID	anti-hHER2-HC-N384-	2	2.0	50525.0	51790.5	51792.8
NO: 230	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G385
SEQ ID	anti-hHER2-HC-E388-	23	2.0	50525.0	51790.5	51794.4
NO: 127	GDS-ppan-MC-MMAF-
	LSWLLRLLN-N389
SEQ ID	anti-hHER2-HC-T394-	3	0.7	50525.0	51790.5	51793.2
NO: 232	GDS-ppan-MC-MMAF-					50525.2
	LSWLLRLLN-P395
SEQ ID	anti-hHER2-HC-P395-	4	n.d.	50525.0	51790.5	51794.6
NO: 233	GDS-ppan-MC-MMAF-					51773.9
	LSWLLRLLN-P396					51820.4
SEQ ID	anti-hHER2-HC-D401-	10	0.2	50525.0	51790.5	51793.7
NO: 235	GDS-ppan-MC-MMAF-					51818.2
	LSWLLRLLN-G402
SEQ ID	anti-hHER2-HC-S415-	5	1.1	50525.0	51790.5	51792.8
NO: 236	GDS-ppan-MC-MMAF-					50526.8
	LSWLLRLLN-R416
SEQ ID	anti-hHER2-HC-R416-	5	1.7	50525.0	51790.5	51794.1
NO: 237	GDS-ppan-MC-MMAF-
	LSWLLRLLN-W417
SEQ ID	anti-hHER2-HC-W417-	15	1.4	50525.0	51790.5	51798.8
NO: 238	GDS-ppan-MC-MMAF-					51921.6g
	LSWLLRLLN-Q418
SEQ ID	anti-hHER2-HC-Q418-	9	2.0	50525.0	51790.5	51794.4
NO: 239	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q419
SEQ ID	anti-hHER2-HC-H433-	5	2.0	50525.0	51790.5	51793.6
NO: 243	GDS-ppan-MC-MMAF-					51922.4g
	LSWLLRLLN-N434					51735.6
SEQ ID	anti-hHER2-HC-N434-	20	2.0	50525.0	51790.5	51797.6
NO: 244	GDS-ppan-MC-MMAF-					51923.6g
	LSWLLRLLN-H435
SEQ ID	anti-hHER2-HC-L443-	24	0.0	50525.0	51790.5	50527.2
NO: 246	GDS-ppan-MC-MMAF-					50547.1
	LSWLLRLLN-S444
SEQ ID	anti-hHER2-HC-P445-	10	2.0	50525.0	51790.5	51786.8
NO: 248	GDS-ppan-MC-MMAF-					51915.6g
	LSWLLRLLN-G446					51729.6
SEQ ID	anti-hHER2-HC-A118-	18	1.5	50331.8	51597.3	51598.4
NO: 249	DS-ppan-MC-MMAF-					51618.3
	LEFIASKLA-S119
SEQ ID	anti-hHER2-HC-S119-	15	1.6	50331.8	51597.3	51602.4
NO: 250	DS-ppan-MC-MMAF-
	LEFIASKLA-T120
SEQ ID	anti-hHER2-HC-T120-	27	2.0	50331.8	51597.3	51600.8
NO: 251	DS-ppan-MC-MMAF-
	LEFIASKLA-K121
SEQ ID	anti-hHER2-HC-S136-	19	2.0	50331.8	51597.3	51603.2
NO: 257	DS-ppan-MC-MMAF-
	LEFIASKLA-137
SEQ ID	anti-hHER2-HC-G138-	21	2.0	50331.8	51597.3	51601.6
NO: 259	DS-ppan-MC-MMAF-
	LEFIASKLA-T139
SEQ ID	anti-hHER2-HC-P153-	15	0.1	50331.8	51597.3	50339.6
NO: 261	DS-ppan-MC-MMAF-
	LEFIASKLA-V154
SEQ ID	anti-hHER2-HC-N159-	13	n.d.	50331.8	51597.3	50334.4
NO: 262	DS-ppan-MC-MMAF-					51600.4
	LEFIASKLA-S160
SEQ ID	anti-hHER2-HC-A162-	16	1.7	50331.8	51597.3	51598.3
NO: 265	DS-ppan-MC-MMAF-					51618.5
	LEFIASKLA-L163
SEQ ID	anti-hHER2-HC-T164-	18	1.2	50331.8	51597.3	51597.7
NO: 267	DS-ppan-MC-MMAF-					51616.8
	LEFIASKLA-S165
SEQ ID	anti-hHER2-HC-S165-	23	1.9	50331.8	51597.3	51595.2
NO: 268	DS-ppan-MC-MMAF-
	LEFIASKLA-G166
SEQ ID	anti-hHER2-HC-P171-	15	1.0	50331.8	51597.3	50332.9
NO: 269	DS-ppan-MC-MMAF-					50353.8
	LEFIASKLA-A172
SEQ ID	anti-hHER2-HC-S176-	13	0.1	50331.8	51597.3	50333.0
NO: 270	DS-ppan-MC-MMAF-					50354.0
	LEFIASKLA-S177
SEQ ID	anti-hHER2-HC-S190-	23	0.2	50331.8	51597.3	50333.6
NO: 273	DS-ppan-MC-MMAF-					51600.8
	LEFIASKLA-S191
SEQ ID	anti-hHER2-HC-S191-	24	1.6	50331.8	51597.3	51598.9
NO: 274	DS-ppan-MC-MMAF-					51620.3
	LEFIASKLA-S192
SEQ ID	anti-hHER2-HC-S192-	21	2.0	50331.8	51597.3	51598.4
NO: 275	DS-ppan-MC-MMAF-					51618.8
	LEFIASKLA-L193
SEQ ID	anti-hHER2-HC-G194-	14	1.6	50331.8	51597.3	51599.2
NO: 277	DS-ppan-MC-MMAF-
	LEFIASKLA-T195
SEQ ID	anti-hHER2-HC-T195-	14	1.9	50331.8	51597.3	51599.0
NO: 278	DS-ppan-MC-MMAF-					51617.2
	LEFIASKLA-Q196
SEQ ID	anti-hHER2-HC-Q196-	21	2.0	50331.8	51597.3	51598.1
NO: 279	DS-ppan-MC-MMAF-					51618.7
	LEFIASKLA-T197
SEQ ID	anti-hHER2-HC-K205-	24	0.0	50331.8	51597.3	50327.6
NO: 280	DS-ppan-MC-MMAF-
	LEFIASKLA-P206
SEQ ID	anti-hHER2-HC-P206-	23	0.0	50331.8	51597.3	50333.3
NO: 281	DS-ppan-MC-MMAF-					50354.7
	LEFIASKLA-S207
SEQ ID	anti-hHER2-HC-E233-	28	0.6	50331.8	51597.3	50330.8
NO: 286	DS-ppan-MC-MMAF-					51596.6
	LEFIASKLA-L234					51615.6
SEQ ID	anti-hHER2-HC-L235-	24	2.0	50331.8	51597.3	51596.7
NO: 288	DS-ppan-MC-MMAF-					51617.5
	LEFIASKLA-G236
SEQ ID	anti-hHER2-HC-G236-	22	1.3	50331.8	51597.3	51598.8
NO: 289	DS-ppan-MC-MMAF-					51620.7
	LEFIASKLA-G237
SEQ ID	anti-hHER2-HC-P244-	8	1.4	50331.8	51597.3	51596.8
NO: 290	DS-ppan-MC-MMAF-					51614.6
	LEFIASKLA-P245
SEQ ID	anti-hHER2-HC-P245-	22	1.0	50331.8	51597.3	50330.6
NO: 291	DS-ppan-MC-MMAF-					51595.9
	LEFIASKLA-K246					50351.5
SEQ ID	anti-hHER2-HC-I253-DS-	0	N/A	50331.8	51597.3	N/A
NO: 292	ppan-MC-MMAF-
	LEFIASKLA-S254
SEQ ID	anti-hHER2-HC-S254-	24	1.9	50331.8	51597.3	51596.6
NO: 293	DS-ppan-MC-MMAF-					51616.8
	LEFIASKLA-R255
SEQ ID	anti-hHER2-HC-R255-	21	2.0	50331.8	51597.3	51596.3
NO: 294	DS-ppan-MC-MMAF-					51616.5
	LEFIASKLA-T256
SEQ ID	anti-hHER2-HC-P257-	22	1.9	50331.8	51597.3	51596.3
NO: 296	DS-ppan-MC-MMAF-					51616.1
	LEFIASKLA-E258
SEQ ID	anti-hHER2-HC-S267-	23	0.2	50331.8	51597.3	51596.0
NO: 297	DS-ppan-MC-MMAF-					50330.9
	LEFIASKLA-H268					51615.6
SEQ ID	anti-hHER2-HC-H268-	22	0.7	50331.8	51597.3	51596.2
NO: 298	DS-ppan-MC-MMAF-					50331.0
	LEFIASKLA-E269					51616.8
SEQ ID	anti-hHER2-HC-E269-	17	1.8	50331.8	51597.3	51598.7
NO: 299	DS-ppan-MC-MMAF-					51620.0
	LEFIASKLA-D270
SEQ ID	anti-hHER2-HC-D270-	26	1.3	50331.8	51597.3	51596.4
NO: 300	DS-ppan-MC-MMAF-					51616.5
	LEFIASKLA-P271
SEQ ID	anti-hHER2-HC-P271-	22	1.7	50331.8	51597.3	51595.9
NO: 301	DS-ppan-MC-MMAF-					51615.4
	LEFIASKLA-E272
SEQ ID	anti-hHER2-HC-D280-	4	0.7	50331.8	51597.3	50330.8
NO: 302	DS-ppan-MC-MMAF-					51596.3
	LEFIASKLA-G281					50351.7
SEQ ID	anti-hHER2-HC-H285-	25	0.0	50331.8	51597.3	50331.0
NO: 303	DS-ppan-MC-MMAF-					50352.7
	LEFIASKLA-N286
SEQ ID	anti-hHER2-HC-N286-	20	0.0	50331.8	51597.3	50332.0
NO: 304	DS-ppan-MC-MMAF-					50354.1
	LEFIASKLA-A287
SEQ ID	anti-hHER2-HC-P291-	21	0.5	50331.8	51597.3	50333.5
NO: 305	DS-ppan-MC-MMAF-					51598.8
	LEFIASKLA-R292					51620.0
SEQ ID	anti-hHER2-HC-N315-	15	n.d.	50331.8	51597.3	50331.5
NO: 310	DS-ppan-MC-MMAF-					51596.8
	LEFIASKLA-G316					50353.1
SEQ ID	anti-hHER2-HC-G316-	9	1.1	50331.8	51597.3	51596.6
NO: 311	DS-ppan-MC-MMAF-					50331.0
	LEFIASKLA-K317					51614.0
SEQ ID	anti-hHER2-HC-K317-	10	0.8	50331.8	51597.3	50330.9
NO: 312	DS-ppan-MC-MMAF-					51596.3
	LEFIASKLA-E318					50352.1
SEQ ID	anti-hHER2-HC-K326-	15	0.0	50331.8	51597.3	50330.8
NO: 313	DS-ppan-MC-MMAF-					51597.2
	LEFIASKLA-A327
SEQ ID	anti-hHER2-HC-A327-	25	0.1	50331.8	51597.3	50333.6
NO: 314	DS-ppan-MC-MMAF-					50355.1
	LEFIASKLA-L328
SEQ ID	anti-hHER2-HC-L328-	13	1.9	50331.8	51597.3	51598.8
NO: 315	DS-ppan-MC-MMAF-
	LEFIASKLA-P329
SEQ ID	anti-hHER2-HC-P329-	7	0.9	50331.8	51597.3	51601.6
NO: 316	DS-ppan-MC-MMAF-					50334.8
	LEFIASKLA-A330
SEQ ID	anti-hHER2-HC-A330-	25	1.8	50331.8	51597.3	51602.4
NO: 317	DS-ppan-MC-MMAF-
	LEFIASKLA-P331
SEQ ID	anti-hHER2-HC-A339-	25	0.0	50331.8	51597.3	50333.6
NO: 318	DS-ppan-MC-MMAF-
	LEFIASKLA-K340
SEQ ID	anti-hHER2-HC-K340-	27	0.4	50331.8	51597.3	51600.4
NO: 319	DS-ppan-MC-MMAF-					50333.2
	LEFIASKLA-G341
SEQ ID	anti-hHER2-HC-G341-	25	0.2	50331.8	51597.3	51599.9
NO: 320	DS-ppan-MC-MMAF-					50334.7
	LEFIASKLA-Q342
SEQ ID	anti-hHER2-HC-Q342-	28	0.8	50331.8	51597.3	51599.8
NO: 321	DS-ppan-MC-MMAF-					50334.5
	LEFIASKLA-P343
SEQ ID	anti-hHER2-HC-P343-	24	1.9	50331.8	51597.3	51599.1
NO: 322	DS-ppan-MC-MMAF-					51615.8
	LEFIASKLA-R344
SEQ ID	anti-hHER2-HC-R344-	29	1.9	50331.8	51597.3	51600.1
NO: 323	DS-ppan-MC-MMAF-					51616.6
	LEFIASKLA-E345
SEQ ID	anti-hHER2-HC-E356-	20	0.8	50331.8	51597.3	51600.8
NO: 325	DS-ppan-MC-MMAF-					50335.1
	LEFIASKLA-E357					51616.8
SEQ ID	anti-hHER2-HC-M358-	26	0.2	50331.8	51597.3	50333.9
NO: 327	DS-ppan-MC-MMAF-					51599.4
	LEFIASKLA-T359
SEQ ID	anti-hHER2-HC-K360-	24	0.6	50331.8	51597.3	51599.9
NO: 328	DS-ppan-MC-MMAF-					51615.1
	LEFIASKLA-N361
SEQ ID	anti-hHER2-HC-N384-	24	0.0	50331.8	51597.3	50334.3
NO: 329	DS-ppan-MC-MMAF-					50354.2
	LEFIASKLA-G385
SEQ ID	anti-hHER2-HC-E388-	21	1.9	50331.8	51597.3	51601.2
NO: 129	DS-ppan-MC-MMAF-
	LEFIASKLA-N389
SEQ ID	anti-hHER2-HC-N389-	25	1.6	50331.8	51597.3	51600.1
NO: 330	DS-ppan-MC-MMAF-					51620.9
	LEFIASKLA-N390
SEQ ID	anti-hHER2-HC-P395-	25	0.0	50331.8	51597.3	50334.4
NO: 332	DS-ppan-MC-MMAF-					50352.8
	LEFIASKLA-P396
SEQ ID	anti-hHER2-HC-D399-	11	0.0	50331.8	51597.3	50335.1
NO: 333	DS-ppan-MC-MMAF-					50353.6
	LEFIASKLA-S400
SEQ ID	anti-hHER2-HC-D401-	23	0.0	50331.8	51597.3	50334.9
NO: 335	DS-ppan-MC-MMAF-					50353.0
	LEFIASKLA-G402
SEQ ID	anti-hHER2-HC-S415-	21	0.2	50331.8	51597.3	50335.0
NO: 336	DS-ppan-MC-MMAF-					51600.5
	LEFIASKLA-R416
SEQ ID	anti-hHER2-HC-R416-	15	1.9	50331.8	51597.3	51599.9
NO: 337	DS-ppan-MC-MMAF-					51615.8
	LEFIASKLA-W417
SEQ ID	anti-hHER2-HC-W417-	9	0.2	50331.8	51597.3	50334.8
NO: 338	DS-ppan-MC-MMAF-					51599.9
	LEFIASKLA-Q418					50353.4
SEQ ID	anti-hHER2-HC-Q418-	22	0.5	50331.8	51597.3	51600.5
NO: 339	DS-ppan-MC-MMAF-					50335.2
	LEFIASKLA-Q419					51616.7
SEQ ID	anti-hHER2-HC-Q419-	21	0.8	50331.8	51597.3	51600.0
NO: 340	DS-ppan-MC-MMAF-					51616.5
	LEFIASKLA-G420
SEQ ID	anti-hHER2-HC-G420-	22	1.1	50331.8	51597.3	51599.5
NO: 341	DS-ppan-MC-MMAF-					51616.0
	LEFIASKLA-N421
SEQ ID	anti-hHER2-HC-N421-	24	1.4	50331.8	51597.3	51600.6
NO: 342	DS-ppan-MC-MMAF-					51614.9
	LEFIASKLA-V422
SEQ ID	anti-hHER2-HC-H433-	26	0.0	50331.8	51597.3	50334.7
NO: 343	DS-ppan-MC-MMAF-					50276.2
	LEFIASKLA-N434
SEQ ID	anti-hHER2-HC-N434-	25	0.6	50331.8	51597.3	51592.4
NO: 344	DS-ppan-MC-MMAF-					50326.8
	LEFIASKLA-H435					50268.8
SEQ ID	anti-hHER2-HC-L443-	26	0.0	50331.8	51597.3	50334.5
NO: 346	DS-ppan-MC-MMAF-					50275.8
	LEFIASKLA-S444					50353.4
SEQ ID	anti-hHER2-HC-G446-	29	1.8	50331.8	51597.3	51595.2
NO: 349	DS-ppan-MC-MMAF-
	LEFIASKLA-K447
SEQ ID	anti-hHER2-LC-T109-	34	1.4	24811.6	26077.1	26077.8
NO: 31	GDS-ppan-MC-MMAF-					26058.3
	LSWLLRLLN-V110					26096.4
SEQ ID	anti-hHER2-LC-V110-	5	1.9	24811.6	26077.1	26076.4
NO: 32	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A111
SEQ ID	anti-hHER2-LC-A111-	13	2.0	24811.6	26077.1	26075.6
NO: 33	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A112
SEQ ID	anti-hHER2-LC-P119-	1	N/A	24811.6	26077.1	N/A
NO: 34	GDS-ppan-MC-MMAF-
	LSWLLRLLN-P120
SEQ ID	anti-hHER2-LC-D122-	1	N/A	24811.6	26077.1	N/A
NO: 37	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E123
SEQ ID	anti-hHER2-LC-Y140-	3	0.8	24811.6	26077.1	26077.2
NO: 38	GDS-ppan-MC-MMAF-
	LSWLLRLLN-P141
SEQ ID	anti-hHER2-LC-P141-	3	0.3	24811.6	26077.1	26076.8
NO: 39	GDS-ppan-MC-MMAF-
	LSWLLRLLN-R142
SEQ ID	anti-hHER2-LC-R142-	5	0.3	24811.6	26077.1	26077.7
NO: 40	GDS-ppan-MC-MMAF-					24811.8
	LSWLLRLLN-E143					26097.2
SEQ ID	anti-hHER2-LC-E143-	6	0.4	24811.6	26077.1	26075.6
NO: 41	GDS-ppan-MC-MMAF-					26097.6
	LSWLLRLLN-A144
SEQ ID	anti-hHER2-LC-D151-	16	0.3	24811.6	26077.1	24811.7
NO: 42	GDS-ppan-MC-MMAF-					26077.3
	LSWLLRLLN-N152					24829.7
SEQ ID	anti-hHER2-LC-N152-	5	1.0	24811.6	26077.1	26077.2
NO: 43	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A153
SEQ ID	anti-hHER2-LC-A153-	13	1.9	24811.6	26077.1	26077.7
NO: 44	GDS-ppan-MC-MMAF-					26096.6
	LSWLLRLLN-L154
SEQ ID	anti-hHER2-LC-L154-	21	1.2	24811.6	26077.1	26078.2
NO: 45	GDS-ppan-MC-MMAF-					26096.9
	LSWLLRLLN-Q155
SEQ ID	anti-hHER2-LC-Q155-	14	2.0	24811.6	26077.1	26075.2
NO: 46	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S156
SEQ ID	anti-hHER2-LC-E161-	19	1.9	24811.6	26077.1	26077.6
NO: 47	GDS-ppan-MC-MMAF-					26097.6
	LSWLLRLLN-S162
SEQ ID	anti-hHER2-LC-S162-	17	0.7	24811.6	26077.1	26077.2
NO: 48	GDS-ppan-MC-MMAF-
	LSWLLRLLN-V163
SEQ ID	anti-hHER2-LC-T164-	14	0.0	24811.6	26077.1	24810.0
NO: 50	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E165
SEQ ID	anti-hHER2-LC-E165-	0	N/A	24811.6	26077.1	N/A
NO: 51	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q166
SEQ ID	anti-hHER2-LC-Q166-	17	0.0	24811.6	26077.1	24810.4
NO: 52	GDS-ppan-MC-MMAF-					24832.4
	LSWLLRLLN-D167
SEQ ID	anti-hHER2-LC-D167-	24	0.7	24811.6	26077.1	26077.4
NO: 53	GDS-ppan-MC-MMAF-					24812.3
	LSWLLRLLN-S168					26096.5
SEQ ID	anti-hHER2-LC-T197-	8	1.2	24811.6	26077.1	24812.0
NO: 54	GDS-ppan-MC-MMAF-					26077.9
	LSWLLRLLN-H198					24831.4
SEQ ID	anti-hHER2-LC-Q199-	5	1.9	24811.6	26077.1	26076.0
NO: 56	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G200
SEQ ID	anti-hHER2-LC-S202-	8	2.0	24811.6	26077.1	26077.4
NO: 59	GDS-ppan-MC-MMAF-					26095.9
	LSWLLRLLN-S203
SEQ ID	anti-hHER2-LC-V110-	15	2.0	24618.4	25883.9	25883.2
NO: 63	DS-ppan-MC-MMAF-
	LEFIASKLA-A111
SEQ ID	anti-hHER2-LC-A111-	17	1.6	24618.4	25883.9	25881.2
NO: 64	DS-ppan-MC-MMAF-
	LEFIASKLA-A112
SEQ ID	anti-hHER2-LC-P119-	13	0.0	24618.4	25883.9	24618.1
NO: 65	DS-ppan-MC-MMAF-					24637.6
	LEFIASKLA-P120
SEQ ID	anti-hHER2-LC-P120-	9	0.0	24618.4	25883.9	24617.2
NO: 66	DS-ppan-MC-MMAF-
	LEFIASKLA-S121
SEQ ID	anti-hHER2-LC-S121-	4	0.0	24618.4	25883.9	24616.8
NO: 67	DS-ppan-MC-MMAF-
	LEFIASKLA-D122
SEQ ID	anti-hHER2-LC-D122-	2	0.0	24618.4	25883.9	24616.8
NO: 68	DS-ppan-MC-MMAF-
	LEFIASKLA-E123
SEQ ID	anti-hHER2-LC-Y140-	5	0.1	24618.4	25883.9	24616.4
NO: 69	DS-ppan-MC-MMAF-
	LEFIASKLA-P141
SEQ ID	anti-hHER2-LC-R142-	13	0.1	24618.4	25883.9	24618.8
NO: 71	DS-ppan-MC-MMAF-					25884.0
	LEFIASKLA-E143					24639.3
SEQ ID	anti-hHER2-LC-E143-	10	0.0	24618.4	25883.9	24616.8
NO: 72	DS-ppan-MC-MMAF-
	LEFIASKLA-A144
SEQ ID	anti-hHER2-LC-D151-	17	0.0	24618.4	25883.9	24617.2
NO: 73	DS-ppan-MC-MMAF-
	LEFIASKLA-N152
SEQ ID	anti-hHER2-LC-N152-	17	0.0	24618.4	25883.9	24616.8
NO: 74	DS-ppan-MC-MMAF-
	LEFIASKLA-A153
SEQ ID	anti-hHER2-LC-A153-	20	1.8	24618.4	25883.9	25882.8
NO: 75	DS-ppan-MC-MMAF-
	LEFIASKLA-L154
SEQ ID	anti-hHER2-LC-L154-DS-	25	0.6	24618.4	25883.9	25884.6
NO: 76	ppan-MC-MMAF-					24618.9
	LEFIASKLA-Q155					25904.2
SEQ ID	anti-hHER2-LC-Q155-	27	1.1	24618.4	25883.9	25883.9
NO: 77	DS-ppan-MC-MMAF-					24619.0
	LEFIASKLA-S156					25903.2
SEQ ID	anti-hHER2-LC-S162-	7	0.0	24618.4	25883.9	24616.4
NO: 79	DS-ppan-MC-MMAF-
	LEFIASKLA-V163
SEQ ID	anti-hHER2-LC-T164-DS-	10	0.0	24618.4	25883.9	24616.4
NO: 81	ppan-MC-MMAF-
	LEFIASKLA-E165
SEQ ID	anti-hHER2-LC-E165-	29	0.0	24618.4	25883.9	24618.9
NO: 82	DS-ppan-MC-MMAF-					24639.4
	LEFIASKLA-Q166
SEQ ID	anti-hHER2-LC-Q166-	20	0.0	24618.4	25883.9	24617.2
NO: 83	DS-ppan-MC-MMAF-
	LEFIASKLA-D167
SEQ ID	anti-hHER2-LC-D167-	28	0.0	24618.4	25883.9	24618.8
NO: 84	DS-ppan-MC-MMAF-					24639.0
	LEFIASKLA-S168
SEQ ID	anti-hHER2-LC-T197-DS-	5	0.0	24618.4	25883.9	24615.2
NO: 85	ppan-MC-MMAF-
	LEFIASKLA-H198
SEQ ID	anti-hHER2-LC-Q199-	7	0.0	24618.4	25883.9	24617.2
NO: 87	DS-ppan-MC-MMAF-
	LEFIASKLA-G200
SEQ ID	anti-hHER2-LC-G200-	18	0.2	24618.4	25883.9	24618.8
NO: 88	DS-ppan-MC-MMAF-					25884.4
	LEFIASKLA-L201					24638.9
SEQ ID	anti-hHER2-LC-L201-DS-	15	0.8	24618.4	25883.9	25884.0
NO: 89	ppan-MC-MMAF-
	LEFIASKLA-S202
aName represents part of the HC or LC that contains the peptide tag with the attached compound, the paired wildtype chain is not listed.
bYield of antibody per liter culture (based on 35 mL cultures) measured after protein A purification.
cDrug-to-antibody ratio according to HPLC.
dMass in Dalton as predicted for the antibody.
eMass in Dalton as predicted for the ADC.
fMass in Dalton as detected on an Agilent 6520 Q-TOF instrument (Agilent Technologies). Most prominent observation is listed first.
gObserved mass corresponds to non-clipped C-terminal lysine residue of heavy chain.
n.d., not determined. The drug-to-antibody ratio could not be determined accurately be HPLC because of peak overlap.
N/A, not applicable. Conjugation was not attempted or data could not be obtained because of low yield.

Example 25. Scale Up of Selected Peptide-Tagged ADCs for Pharmacokinetic (PK) Studies and Further Characterization

The PEPP system does not provide enough quantities of peptide-tagged ADCs for PK studies. Subsequently, expression of 39 constructs (Table 22) selected from among the 183 antibodies tested in Example 24 (Table 21) was scaled up to 200-400 mL culture volume. Selection criteria for scale-up were high conjugation efficiency, reasonable expression yield, confirmed in vitro potency, and low aggregation level as observed for the ADCs prepared in Example 24.

After expression of the selected S6/ybbR-tagged antibodies in Freestyle™ expression media (Invitrogen) for five days at 37° C. under 5% CO₂, the cultures were harvested by centrifugation, and the resulting medium supernatants were passed through 0.22 m filters (EMD Millipore). Antibody expression was verified by SDS-PAGE analysis. Next, the filtrates were loaded at a flowrate of 0.5-1 mL/min onto PBS-equilibrated columns containing 0.5 mL of Protein A resin by using a MINIPULS Evolution peristaltic pump (Gilson Inc.). After washing the columns with 100-200 column volumes of PBS, the antibody constructs were eluted with 0.1 M sodium acetate (pH 3.0) in two 2.5 mL fractions. Both fractions were immediately neutralized with 25-38% (v/v) of Tris-HCl buffer (1 M, pH 8.0). In order to determine the yield of the Protein A-purified antibodies (Table 22), protein concentrations of the eluates were measured in duplicate on a ND-1000 UV-Vis Spectrophotometer (NanoDrop Technologies) at 280 nm according to the preset molar extinction coefficient for IgG molecules. Using Slide-A-Lyzer Dialysis Cassettes (3.5-7.0 kDa cut-off, Pierce), the second elution fraction of each construct was dialyzed into PBS for subsequent thermostability measurements of non-conjugated antibodies by DSF (Table 23). The first elution fraction of each peptide-tagged antibody was dialyzed into conjugation buffer (75 mM Tris-HCl buffer at pH 8.0 supplemented with 20 mM NaCl and 12.5 mM MgCl₂). After adjusting the antibody concentration to 2.5 M, conjugation reactions were initiated by addition of CoA-MC-MMAF and Sfp enzyme to final concentrations of 30-60 M and 1-4 M, respectively. The enzymatic reaction was allowed to proceed for about 20 hours at room temperature, before verifying the degree of labeling by analytical reverse-phase HPLC using the respective uncoupled antibody as control (Table 22). All conjugation reactions were analyzed by mass spectrometry on an Agilent 6520 Q-TOF instrument (Table 22). After confirming near quantitative conjugation, reaction mixtures were concentrated to a final volume of 1 mL using 30 kDa cut-off Amicon Ultra centrifugal filter devices (EMD Millipore). Following removal of precipitate by centrifugation, Sfp enzyme and excess CoA-MC-MMAF substrate were removed by SEC (size-exclusion chromatography) on a HiLoad 26/60 Superdex 200 prep grade column (GE Healthcare) in PBS at a flowrate of 1 mL/min. The purity of the peptide-tagged ADCs after SEC was assessed by reverse-phase HPLC. After 0.22 μm filtration, the final yields of the ADCs were determined using triplicate measurements on a ND-1000 UV-Vis Spectrophotometer (NanoDrop Technologies) as above (Table 22).

TABLE 22
ADC production and characterization from 200-400 mL scale-up culture.
		Anti-
Anti-		body	ADC			Expt.	Obs.
body		yieldb	yieldc		Monomere	massf	massg
SEQ ID	ADC namea	(mg/L)	(mg/L)	DARd	(%)	(Da)	(Da)
SEQ ID	anti-hHER2-HC-S119-	57	31	2.0	97	51790.5	51786.4
NO: 151	GDS-ppan-MC-MMAF-
	LSWLLRLLN-T120
SEQ ID	anti-hHER2-HC-T120-	40	23	2.0	100	51790.5	51796.4
NO: 152	GDS-ppan-MC-MMAF-
	LSWLLRLLN-K121
SEQ ID	anti-hHER2-HC-T135-	41	20	2.0	100	51790.5	51785.2
NO: 157	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S136
SEQ ID	anti-hHER2-HC-S136-	40	20	2.0	100	51790.5	51785.6
NO: 158	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G137
SEQ ID	anti-hHER2-HC-A162-	25	16	2.0	100	51790.5	51791.6
NO: 166	GDS-ppan-MC-MMAF-
	LSWLLRLLN-L163
SEQ ID	anti-hHER2-HC-T164-	32	15	2.0	100	51790.5	51787.6
NO: 168	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S165
SEQ ID	anti-hHER2-HC-S165-	39	21	2.0	100	51790.5	51786.4
NO: 169	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G166
SEQ ID	anti-hHER2-HC-P189-	36	25	2.0	100	51790.5	51792.0
NO: 173	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S190
SEQ ID	anti-hHER2-HC-G194-	35	21	2.0	100	51790.5	51794.8
NO: 178	GDS-ppan-MC-MMAF-
	LSWLLRLLN-T195
SEQ ID	anti-hHER2-HC-T195-	39	21	1.9	100	51790.5	51790.4
NO: 179	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q196
SEQ ID	anti-hHER2-HC-P271-	9	4	1.9	100	51790.5	51782.0
NO: 202	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E272
SEQ ID	anti-hHER2-HC-A330-	30	14	1.8	100	51790.5	51796.4
NO: 218	GDS-ppan-MC-MMAF-						50526.8h
	LSWLLRLLN-P331
SEQ ID	anti-hHER2-HC-K340-	20	9	2.0	100	51790.5	51794.4
NO: 220	GDS-ppan-MC-MMAF-						51918.4i
	LSWLLRLLN-G341
SEQ ID	anti-hHER2-HC-G341-	47	26	1.9	100	51790.5	51794.8
NO: 221	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q342
SEQ ID	anti-hHER2-HC-R344-	37	21	2.0	100	51790.5	51795.6
NO: 224	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E345
SEQ ID	anti-hHER2-HC-K360-	46	21	1.9	100	51790.5	51785.2
NO: 229	GDS-ppan-MC-MMAF-
	LSWLLRLLN-N361
SEQ ID	anti-hHER2-HC-E388-	40	25	2.0	100	51790.5	51792.4
NO: 127	GDS-ppan-MC-MMAF-
	LSWLLRLLN-N389
SEQ ID	anti-hHER2-HC-Q418-	55	26	2.0	100	51790.5	51786.8
NO: 239	GDS-ppan-MC-MMAF-						51914.4i
	LSWLLRLLN-Q419
SEQ ID	anti-hHER2-HC-N434-	41	10	1.9	n.d.	51790.5	51785.2
NO: 244	GDS-ppan-MC-MMAF-						51912.8i
	LSWLLRLLN-H435
SEQ ID	anti-hHER2-HC-P445-	9	3	1.9	100	51790.5	51783.2
NO: 248	GDS-ppan-MC-MMAF-						51910.8i
	LSWLLRLLN-G446
SEQ ID	anti-hHER2-HC-S119-	35	25	1.9	100	51597.3	51591.2
NO: 250	DS-ppan-MC-MMAF-
	LEFIASKLA-T120
SEQ ID	anti-hHER2-HC-T120-	42	24	1.9	100	51597.3	51592.4
NO: 251	DS-ppan-MC-MMAF-
	LEFIASKLA-K121
SEQ ID	anti-hHER2-HC-S136-	33	20	1.9	100	51597.3	51602.0
NO: 257	DS-ppan-MC-MMAF-
	LEFIASKLA-137
SEQ ID	anti-hHER2-HC-G138-	26	14	1.9	100	51597.3	51592.0
NO: 259	DS-ppan-MC-MMAF-
	LEFIASKLA-T139
SEQ ID	anti-hHER2-HC-S165-	33	21	1.9	100	51597.3	51595.2
NO: 268	DS-ppan-MC-MMAF-
	LEFIASKLA-G166
SEQ ID	anti-hHER2-HC-G194-	24	14	1.9	100	51597.3	51592.4
NO: 277	DS-ppan-MC-MMAF-
	LEFIASKLA-T195
SEQ ID	anti-hHER2-HC-L328-	35	22	1.9	100	51597.3	51600.4
NO: 315	DS-ppan-MC-MMAF-
	LEFIASKLA-P329
SEQ ID	anti-hHER2-HC-A330-	20	12	1.8	100	51597.3	51589.2
NO: 317	DS-ppan-MC-MMAF-						50323.6h
	LEFIASKLA-P331
SEQ ID	anti-hHER2-HC-E388-	51	28	1.9	100	51597.3	51592.0
NO: 129	DS-ppan-MC-MMAF-
	LEFIASKLA-N389
SEQ ID	anti-hHER2-HC-G446-	37	23	1.9	100	51597.3	51590.4
NO: 349	DS-ppan-MC-MMAF-
	LEFIASKLA-K447
SEQ ID	anti-hHER2-LC-V110-	8	3	2.0	93	26077.1	26074.8
NO: 32	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A111
SEQ ID	anti-hHER2-LC-A111-	20	13	2.0	100	26077.1	26073.6
NO: 33	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A112
SEQ ID	anti-hHER2-LC-Q155-	29	19	1.9	100	26077.1	26070.8
NO: 46	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S156
SEQ ID	anti-hHER2-LC-S162-	9	5	1.9	100	26077.1	26076.0
NO: 48	GDS-ppan-MC-MMAF-
	LSWLLRLLN-V163
SEQ ID	anti-hHER2-LC-Q199-	10	3	1.9	100	26077.1	26074.4
NO: 56	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G200
SEQ ID	anti-hHER2-LC-V110-	53	30	1.9	100	25883.9	25880.8
NO: 63	DS-ppan-MC-MMAF-
	LEFIASKLA-A111
SEQ ID	anti-hHER2-LC-A111-	12	8	1.9	100	25883.9	25880.4
NO: 64	DS-ppan-MC-MMAF-						25901.2j
	LEFIASKLA-A112
SEQ ID	anti-hHER2-LC-A153-	14	7	1.9	100	25883.9	25878.0
NO: 75	DS-ppan-MC-MMAF-
	LEFIASKLA-L154
SEQ ID	anti-hHER2-LC-L201-DS-	26	15	1.8	100	25883.9	25881.2
NO: 89	ppan-MC-MMAF-
	LEFIASKLA-S202
aName represents part of the HC or LC that contains the peptide tag with the attached compound, the paired wildtype chain is not listed.
bYield of antibody per liter culture (based on 200-400 mL cultures) measured after protein A purification.
cYield of ADC per liter of culture measured after size-exclusion chromatography.
dDrug-to-antibody ratio according to HPLC.
eAnalytical size exclusion chromatography results for ADC (percent of monomer).
fMass in Dalton as predicted for the ADC.
gMass in Dalton as detected on an Agilent 6520 Q-TOF instrument (Agilent Technologies). Most prominent observation is listed first.
hObserved mass corresponds to non-conjugated antibody.
iObserved mass corresponds to non-clipped C-terminal lysine residue of heavy chain.
jObserved mass presumably corresponds to sodium adduct.
n.d., not determined.

Expression levels of the selected peptide-tagged antibodies averaged 32 mg per liter of cell culture (ranging from 8 to 57 mg/L) (Table 22) and the final yield of purified ADC averaged 17 mg per liter of cell culture (ranging from 3 to 31 mg/L) (Table 22). All ADCs were site-specifically conjugated with two CoA-MC-MMAF molecules (DAR=1.8 to 2) as verified by HPLC and MS (Table 22). No aggregation or oligomeric species were detected for 36 of 39 ADCs prepared (Table 22). All ADCs were more than 93% monomeric as determined by analytical size exclusion chromatography. The thermal stability of nonconjugated antibodies and ADCs was characterized by DSF (Table 23). For wild-type trastuzumab, two DSF thermal melting transitions (Tm1 and Tm2) were observed at 69.7 and 81.2° C. For 29 of 39 peptide-tagged antibodies, both transitions were within less than 3° C. of what was observed for wild-type trastuzumab. Conjugation of CoA-MC-MMAF had no significant effect on Tm2 but lowered Tm1 of the ADC by on average 1° C. relative to the nonconjugated antibody (Table 23). For 11 antibodies (and ADCs), the thermal stability was significantly reduced relative to wild-type trastuzumab as illustrated by the difference in Tm1. This transition is attributed to the unfolding of the CH2 domain of an IgG and indeed most of the antibodies that are destabilized (SEQ ID NO: 202, 218, 220, 221, 224, 315 and 317) have the peptide-tag inserted at positions in the CH2 domain. As stated above, the location of the peptide-tag can significantly affect the properties of the resulting antibody and ADC.

TABLE 23
Thermal stability of modified antibodies and ADCs as determined by differential
scanning fluorometry.
		Anti-	Anti-					Ab-
Anti-		body	body	ADC	ADC			WT
body		Tm1	Tm2	Tm1	Tm2	ΔTm1b	ΔTm2b	ΔTm1c
SEQ ID:	ADC namea	(° C.)	(° C.)	(° C.)	(° C.)	(° C.)	(° C.)	(° C.)
SEQ ID	anti-hHER2-HC-S119-	69.8	t.b.	69.2	t.b.	−0.6	t.b.	0.1
NO: 151	GDS-ppan-MC-MMAF-
	LSWLLRLLN-T120
SEQ ID	anti-hHER2-HC-T120-	69.1	t.b.	68.8	t.b.	−0.3	t.b.	−0.6
NO: 152	GDS-ppan-MC-MMAF-
	LSWLLRLLN-K121
SEQ ID	anti-hHER2-HC-T135-	67.6	81.3	67.1	81.2	−0.5	−0.1	−2.1
NO: 157	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S136
SEQ ID	anti-hHER2-HC-S136-	67.9	81.3	67.3	81.3	−0.6	0	−1.8
NO: 158	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G137
SEQ ID	anti-hHER2-HC-A162-	69.3	80.0	68.9	79.8	−0.3	−0.2	−0.4
NO: 166	GDS-ppan-MC-MMAF-
	LSWLLRLLN-L163
SEQ ID	anti-hHER2-HC-T164-	68.9	80.4	68.8	80.5	−0.2	0.1	−0.8
NO: 168	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S165
SEQ ID	anti-hHER2-HC-S165-	69.2	80.4	68.8	80.2	−0.4	−0.2	−0.5
NO: 169	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G166
SEQ ID	anti-hHER2-HC-P189-	69.0	80.5	68.3	80.4	−0.7	−0.2	−0.7
NO: 173	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S190
SEQ ID	anti-hHER2-HC-G194-	68.7	80.8	67.6	80.9	−1.1	0.1	−1.0
NO: 178	GDS-ppan-MC-MMAF-
	LSWLLRLLN-T195
SEQ ID	anti-hHER2-HC-T195-	69.3	81.1	68.8	80.9	−0.5	−0.1	−0.4
NO: 179	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q196
SEQ ID	anti-hHER2-HC-P271-	53.4	81.6	51.2	81.2	−2.2	−0.4	−16.3
NO: 202	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E272
SEQ ID	anti-hHER2-HC-A330-	52.5	81.5	49.0	81.1	−3.5	−0.3	−17.2
NO: 218	GDS-ppan-MC-MMAF-
	LSWLLRLLN-P331
SEQ ID	anti-hHER2-HC-K340-	65.2	77.3	58.7	81.0	−6.5	3.7	−4.5
NO: 220	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G341
SEQ ID	anti-hHER2-HC-G341-	65.0	76.9	56.0	81.0	−9	4.2	−4.7
NO: 221	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q342
SEQ ID	anti-hHER2-HC-R344-	58.6	81.4	57.7	81.2	−0.9	−0.2	−11.1
NO: 224	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E345
SEQ ID	anti-hHER2-HC-K360-	70.1	81.7	68.8	81.4	−1.3	−0.3	0.4
NO: 229	GDS-ppan-MC-MMAF-
	LSWLLRLLN-N361
SEQ ID	anti-hHER2-HC-E388-	66.4	81.3	66.2	80.9	−0.2	−0.4	−3.3
NO: 127	GDS-ppan-MC-MMAF-
	LSWLLRLLN-N389
SEQ ID	anti-hHER2-HC-Q418-	69.0	81.0	68.3	81.1	−0.7	0.1	−0.7
NO: 239	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q419
SEQ ID	anti-hHER2-HC-N434-	60.5	81.5	n.d.	n.d.	n.d.	n.d.	−9.2
NO: 244	GDS-ppan-MC-MMAF-
	LSWLLRLLN-H435
SEQ ID	anti-hHER2-HC-P445-	71.8	81.0	69.9	80.5	−1.8	−0.5	2.1
NO: 248	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G446
SEQ ID	anti-hHER2-HC-S119-	70.1	t.b.	71.2	t.b.	1	t.b.	0.4
NO: 250	DS-ppan-MC-MMAF-
	LEFIASKLA-T120
SEQ ID	anti-hHER2-HC-T120-	70.4	t.b.	70.4	t.b.	0	t.b.	0.7
NO: 251	DS-ppan-MC-MMAF-
	LEFIASKLA-K121
SEQ ID	anti-hHER2-HC-S136-	69.3	80.8	68.3	81.0	−1.1	0.2	−0.4
NO: 257	DS-ppan-MC-MMAF-
	LEFIASKLA-137
SEQ ID	anti-hHER2-HC-G138-	69.3	80.9	68.5	81.2	−0.7	0.2	−0.4
NO: 259	DS-ppan-MC-MMAF-
	LEFIASKLA-T139
SEQ ID	anti-hHER2-HC-S165-	69.6	80.3	69.2	80.5	−0.4	0.1	−0.1
NO: 268	DS-ppan-MC-MMAF-
	LEFIASKLA-G166
SEQ ID	anti-hHER2-HC-G194-	69.3	81.1	68.5	80.9	−0.9	−0.1	−0.4
NO: 277	DS-ppan-MC-MMAF-
	LEFIASKLA-T195
SEQ ID	anti-hHER2-HC-L328-	56.9	78.8	50.4	81.0	−6.5	2.1	−12.8
NO: 315	DS-ppan-MC-MMAF-
	LEFIASKLA-P329
SEQ ID	anti-hHER2-HC-A330-	54.2	81.1	51.3	81.2	−2.9	0.1	−15.5
NO: 317	DS-ppan-MC-MMAF-
	LEFIASKLA-P331
SEQ ID	anti-hHER2-HC-E388-	69.3	81.5	68.8	81.0	−0.6	−0.5	−0.4
NO: 129	DS-ppan-MC-MMAF-
	LEFIASKLA-N389
SEQ ID	anti-hHER2-HC-G446-	69.9	81.2	69.9	80.9	0	−0.4	0.2
NO: 349	DS-ppan-MC-MMAF-
	LEFIASKLA-K447
SEQ ID	anti-hHER2-LC-V110-	66.9	t.b.	66.3	t.b.	−0.6	t.b.	−2.8
NO: 32	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A111
SEQ ID	anti-hHER2-LC-A111-	67.3	t.b.	66.0	t.b.	−1.3	t.b.	−2.4
NO: 33	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A112
SEQ ID	anti-hHER2-LC-Q155-	69.4	80.0	68.7	79.4	−0.7	−0.6	−0.3
NO: 46	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S156
SEQ ID	anti-hHER2-LC-S162-	68.5	t.b.	67.3	t.b.	−1.2	t.b.	−1.2
NO: 48	GDS-ppan-MC-MMAF-
	LSWLLRLLN-V163
SEQ ID	anti-hHER2-LC-Q199-	67.5	t.b.	67.4	t.b.	−0.1	t.b.	−2.2
NO: 56	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G200
SEQ ID	anti-hHER2-LC-V110-	69.0	t.b.	67.6	t.b.	−1.4	t.b.	−0.7
NO: 63	DS-ppan-MC-MMAF-
	LEFIASKLA-A111
SEQ ID	anti-hHER2-LC-A111-	69.6	t.b.	68.5	t.b.	−1.1	t.b.	−0.1
NO: 64	DS-ppan-MC-MMAF-
	LEFIASKLA-A112
SEQ ID	anti-hHER2-LC-A153-	69.6	79.7	69.0	79.2	−0.5	−0.5	−0.1
NO: 75	DS-ppan-MC-MMAF-
	LEFIASKLA-L154
SEQ ID	anti-hHER2-LC-L201-	69.5	75.1	68.7	74.8	−0.8	−0.4	−0.2
NO: 89	DS-ppan-MC-MMAF-
	LEFIASKLA-S202
aName represents part of the HC or LC that contains the peptide tag with the attached compound, the paired wildtype chain is not listed.
bTm of ADC minus Tm of antibody.
cTm1 of antibody minus Tm1 of wild-type trastuzumab (69.7° C.).
n.d., Not determined. Measurement was not performed due to insufficient sample amounts.
t.b., Transition too broad for accurate determination of Tm2.

Purified ADCs were further characterized for in vitro potency against selected cell lines (Table 24) including two engineered cell lines, MDA-MB231 clone 16 and clone 40, and two cell lines (JimT1 and HCC1954) that endogenously express the targeted antigen, human HER2, on the cell surface. MDA-MB231 clone 16 cells stably express ˜500,000 copies of HER2 per cell while clone 40 expresses only -5000 copies/cell. HCC1954 cells endogenously express high level (˜500,000 copies/cell) of human HER2 on the surface (Clinchy B, Gazdar A, Rabinovsky R, Yefenof E, Gordon B, Vitetta E S. Breast Cancer Res Treat. (2000) 61:217-228). The JimT1 cell line expresses approximately 80,000 copies of HER2 per cell (Mocanu M-M, Fazekas Z, Petras M, Nagy P, Sebestyen Z, Isola J, TimBr J, Park J W, Vereb G, Szöllösi J. Cancer Letters (2005) 227: 201-212). The cell proliferation assays were conducted with Cell-Titer-Glo™ (Promega) five days after cells were incubated with various concentrations of ADCs (Riss et al., (2004) Assay Drug Dev Technol. 2:51-62) with an automated system (Melnick et al., (2006) Proc Natl Acad Sci USA. 103:3153-3158). Trastuzumab peptide-tagged-MMAF ADCs specifically killed MDA-MB231 clone 16, HCC1954 and JimT1 cells (Table 24) but not MDA-MB231 clone 40 cells. IC₅₀ values of the trastuzumab peptide-tagged-MMAF ADCs averaged around 0.24 μM, 0.9 nM and 2.9 nM for MDA-MB231 clone 16, HCC1954 and JimT1 cells, respectively (Table 24), consistent with the different HER2 expression levels.

TABLE 24
In vitro potency of anti-HER2 ADCs. IC50 cell killing concentrations
are reported for several HER2 positive cell lines.b
				MDA-
Anti-				MB-231
body		HCC1954	JimT1	clone 16
SEQ ID	ADC namea	IC50 (μM)	IC50 (μM)	IC50 (μM)
SEQ ID	anti-hHER2-HC-S119-	1.94E−04	5.10E−04	6.82E−04
NO: 151	GDS-ppan-MC-MMAF-
	LSWLLRLLN-T120
SEQ ID	anti-hHER2-HC-T120-	1.69E−04	7.53E−04	7.02E−04
NO: 152	GDS-ppan-MC-MMAF-
	LSWLLRLLN-K121
SEQ ID	anti-hHER2-HC-T135-	1.36E−04	2.57E−04	3.10E−04
NO: 157	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S136
SEQ ID	anti-hHER2-HC-S136-	1.64E−04	2.43E−04	3.05E−04
NO: 158	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G137
SEQ ID	anti-hHER2-HC-A162-	1.55E−04	8.66E−04	3.31E−04
NO: 166	GDS-ppan-MC-MMAF-
	LSWLLRLLN-L163
SEQ ID	anti-hHER2-HC-T164-	1.89E−04	5.36E−04	4.69E−04
NO: 168	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S165
SEQ ID	anti-hHER2-HC-S165-	1.69E−04	6.19E−04	4.00E−04
NO: 169	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G166
SEQ ID	anti-hHER2-HC-P189-	1.47E−04	2.69E−04	2.86E−04
NO: 173	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S190
SEQ ID	anti-hHER2-HC-G194-	1.03E−04	1.33E−03	3.56E−04
NO: 178	GDS-ppan-MC-MMAF-
	LSWLLRLLN-T195
SEQ ID	anti-hHER2-HC-T195-	1.42E−04	3.00E−04	2.79E−04
NO: 179	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q196
SEQ ID	anti-hHER2-HC-P271-	1.33E−04	4.50E−04	6.75E−04
NO: 202	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E272
SEQ ID	anti-hHER2-HC-A330-	9.68E−05	3.18E−04	4.66E−04
NO: 218	GDS-ppan-MC-MMAF-
	LSWLLRLLN-P331
SEQ ID	anti-hHER2-HC-K340-	3.76E−04	5.55E−04	3.08E−04
NO: 220	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G341
SEQ ID	anti-hHER2-HC-G341-	7.21E−05	3.58E−04	7.82E−04
NO: 221	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q342
SEQ ID	anti-hHER2-HC-R344-	2.13E−03	4.47E−04	3.21E−04
NO: 224	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E345
SEQ ID	anti-hHER2-HC-K360-	1.80E−04	1.31E−03	7.57E−04
NO: 229	GDS-ppan-MC-MMAF-
	LSWLLRLLN-N361
SEQ ID	anti-hHER2-HC-E388-	1.57E−04	4.21E−04	5.42E−04
NO: 127	GDS-ppan-MC-MMAF-
	LSWLLRLLN-N389
SEQ ID	anti-hHER2-HC-Q418-	2.48E−04	1.24E−03	7.31E−04
NO: 239	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q419
SEQ ID	anti-hHER2-HC-N434-	n.d.	n.d.	n.d.
NO: 244	GDS-ppan-MC-MMAF-
	LSWLLRLLN-H435
SEQ ID	anti-hHER2-HC-P445-	7.42E−05	3.84E−03	7.44E−04
NO: 248	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G446
SEQ ID	anti-hHER2-HC-S119-	1.80E−04	3.46E−04	3.21E−04
NO: 250	DS-ppan-MC-MMAF-
	LEFIASKLA-T120
SEQ ID	anti-hHER2-HC-T120-	1.98E−04	4.59E−04	3.94E−04
NO: 251	DS-ppan-MC-MMAF-
	LEFIASKLA-K121
SEQ ID	anti-hHER2-HC-S136-	6.48E−05	3.95E−04	2.62E−04
NO: 257	DS-ppan-MC-MMAF-
	LEFIASKLA-137
SEQ ID	anti-hHER2-HC-G138-	1.58E−04	3.33E−02	3.21E−04
NO: 259	DS-ppan-MC-MMAF-
	LEFIASKLA-T139
SEQ ID	anti-hHER2-HC-S165-	1.65E−04	4.07E−04	3.79E−04
NO: 268	DS-ppan-MC-MMAF-
	LEFIASKLA-G166
SEQ ID	anti-hHER2-HC-G194-	1.22E−04	6.48E−04	1.83E−04
NO: 277	DS-ppan-MC-MMAF-
	LEFIASKLA-T195
SEQ ID	anti-hHER2-HC-L328-	1.37E−04	2.79E−04	1.15E−03
NO: 315	DS-ppan-MC-MMAF-
	LEFIASKLA-P329
SEQ ID	anti-hHER2-HC-A330-	4.09E−04	2.24E−02	2.85E−04
NO: 317	DS-ppan-MC-MMAF-
	LEFIASKLA-P331
SEQ ID	anti-hHER2-HC-E388-	2.26E−04	1.83E−03	3.12E−04
NO: 129	DS-ppan-MC-MMAF-
	LEFIASKLA-N389
SEQ ID	anti-hHER2-HC-G446-	2.12E−04	6.82E−04	7.77E−04
NO: 349	DS-ppan-MC-MMAF-
	LEFIASKLA-K447
SEQ ID	anti-hHER2-LC-V110-	2.31E−04	4.14E−04	5.18E−04
NO: 32	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A111
SEQ ID	anti-hHER2-LC-A111-	1.95E−04	1.15E−02	5.05E−04
NO: 33	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A112
SEQ ID	anti-hHER2-LC-Q155-	1.43E−04	5.47E−04	3.70E−04
NO: 46	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S156
SEQ ID	anti-hHER2-LC-S162-	2.67E−04	8.13E−04	7.14E−04
NO: 48	GDS-ppan-MC-MMAF-
	LSWLLRLLN-V163
SEQ ID	anti-hHER2-LC-Q199-	1.92E−04	9.21E−04	4.77E−04
NO: 56	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G200
SEQ ID	anti-hHER2-LC-V110-	3.97E−04	4.62E−04	2.77E−04
NO: 63	DS-ppan-MC-MMAF-
	LEFIASKLA-A111
SEQ ID	anti-hHER2-LC-A111-	1.59E−04	6.32E−04	1.68E−02
NO: 64	DS-ppan-MC-MMAF-
	LEFIASKLA-A112
SEQ ID	anti-hHER2-LC-A153-	1.80E−04	2.03E−02	2.60E−04
NO: 75	DS-ppan-MC-MMAF-
	LEFIASKLA-L154
SEQ ID	anti-hHER2-LC-L201-	4.25E−04	3.86E−04	4.74E−04
NO: 89	DS-ppan-MC-MMAF-
	LEFIASKLA-S202
aName represents part of the HC or LC that contains the peptide tag with the attached compound, the paired wildtype chain is not listed.
bNo cell killing was observed for HER2 negative cells at the highest concentration measured (33 nM).
n.d., not determined.

Good pharmacokinetic properties are essential for in vivo efficacy of ADCs (Hamblett, et al., Clin Cancer Res., 10:7063-7070 (2004); Alley et al., Bioconjug. Chem. 19:759-765 (2008)). The conjugation of a CoA-MC-MMAF molecule to an antibody can negatively affect its biophysical properties resulting in rapid clearance and dramatically reduced in vivo efficacy of the corresponding ADC (Hamblett et al., 2004). To evaluate the effects of conjugation site on in vivo clearance and ADC in vivo stability, pharmacokinetic (PK) studies were performed in non-tumor bearing mice with all 39 peptide-tagged trastuzumab ADCs (Table 25).

Each peptide-tagged MMAF ADC was injected intravenously into three mice at a single dose of 1 mg/kg. Nine plasma samples were then collected over a time course of 340 hours before plasma titers of the ADCs were determined by ELISA. The ELISA assay uses the immobilized extracellular domain of human HER2 for capturing trastuzumab ADC molecules from plasma samples. Following the capture step of this assay, an anti-MMAF antibody is used to exclusively measure the plasma concentration of the “intact” trastuzumab MMAF conjugate. In a second ELISA experiment, an anti-hlgG antibody generates a signal indicating the plasma concentration of both conjugated and unconjugated trastuzumab molecules. If no payload deconjugation of the ADC occurs in vivo, both anti-MMAF and anti-hlgG ELISAs are expected to provide identical readouts on ADC plasma concentration. However, in the case of payload loss in vivo, the anti-MMAF ELISA is expected to produce a lower signal than the anti-hlgG ELISA. The comparison of both ELISA signals therefore allows the quantification of payload deconjugation during the in vivo exposure of the respective ADC. The interpretation of the PK data is based on standard curves that were generated with the same ADCs as used for intravenous injection into mice.

The area-under-the-plasma-concentration-versus-time-curve (AUC) is an important pharmacokinetic parameter that can be used to determine the total clearance and bioavailability of the administered biotherapeutic agent. For each peptide-tagged MMAF ADC, two characteristic AUC values, AUC hlgG and AUC MMAF, were obtained by the anti-hlgG and anti-MMAF ELISA experiments, respectively. Table 25 summarizes the AUC hlgG and AUC MMAF values as well as their respective ratios of the 39 tested peptide-tagged ADCs. The obtained AUC hlgG values span over a wide range with the highest value of 28334 nM*hr being about 20-fold higher than the lowest value of 1362 nM*hr, with the average being 16275 nM*hr. FIG. 19 A-C exemplifies PK curves of three peptide-tagged MMAF ADCs displaying high AUC hlgG values (ADC of SEQ ID NO:248, 28334 nM*hr; ADC of SEQ ID NO:33, 21011 nM*hr; ADC of SEQ ID NO:251, 21689 nM*hr). On the contrary, PK curves of three constructs showing low AUC hlgG values (ADC of SEQ ID NO:218, 1362 nM*hr; ADC of SEQ ID NO:202, 1757 nM*hr; ADC of SEQ ID NO:244, 2378 nM*hr) are illustrated in FIG. 19 D-F. Despite the great variation of AUC hlgG values, both anti-hlgG and anti-MMAF titers track each other, suggesting that little if any payload deconjugation occurred in vivo. Moreover, the ratios between AUC MMAF and AUC hlgG values of all 39 tested peptide-tagged ADCs average at 1.0±0.1 (AUC(MMAF)/AUC(hlgG), see Table 25) suggesting that the maleimide-based linkage between the MC-MMAF and the terminal thiol of the 4′-phosphopantetheine (ppan) moiety remained stable in circulation over the time course of the PK experiment. Likewise, these results also indicate a high in vivo stability of the phosphodiester-based linkage between the ppan prosthetic group and the serine residue of the inserted S6/ybbR peptide tag.

The rapid clearance observed for some of the peptide-tagged ADCs may be attributed to the insertion of an S6 or ybbR peptide sequence into specific regions of the IgG1 molecule. This putative relationship between tag insertion site and pharmacokinetic profile is exemplified by the two peptide-tagged MMAF ADCs of SEQ ID NO:218 and SEQ ID NO:202, which display the lowest AUC hlgG values of 1362 nM*hr and 1757 nM*hr, respectively. Both ADCs contain S6 tag insertions in the CH2 domain of the heavy chain. In addition to the instability in murine circulation, these ADCs also exhibit the lowest and third lowest thermostabilities of the 39 tested samples of the PK study. According to DSF measurements, the corresponding ADCs display Tm1s of 49.0° C. (ADC of SEQ ID NO:218) and 51.2° C. (ADC of SEQ ID NO:202), resulting in a decrease of 20.7° C. and 18.5° C., respectively, in comparison to wild-type trastuzumab having a Tm1 of 69.7° C. In contrast, the 16 ADCs with the highest AUC hlgG values (18406-28334 nM*hr) display Tm1 values which are not more than 3.7° C. below the Tm1 of wild-type trastuzumab, suggesting a possible correlation between pharmacokinetics and thermostability of ADCs. Moreover, ten of these 16 ADCs contain S6 or ybbR tags in loop regions of the CH1 domain of the heavy chain. As mentioned above, peptide tag insertions at these favorable sites also display the best overall conjugation efficiencies, making them preferred candidates for ADC production. These include antibodies with heavy chain insertions between S119-T120, T120-K121, T135-S136, S136-G137, G138-T139, S165-G166, and E388-N389 (CH3 domain) corresponding to SEQ ID numbers 151, 250, 152, 251, 157, 256, 158, 257, 160, 259, 169, 268, 126, 127, 128, 129, 130, 131, 132, 149, and 356.

TABLE 25
Pharmacokinetics data.
Anti-		AUCb	AUCc
body		hIgG	MMAF	AUC(MMAF)/
SEQ ID	ADC namea	(nM*hr)	(nM*hr)	AUC(hIgG)
SEQ ID	anti-hHER2-HC-S119-	22485	21693	1.0
NO: 151	GDS-ppan-MC-MMAF-
	LSWLLRLLN-T120
SEQ ID	anti-hHER2-HC-T120-	13880	12542	0.9
NO: 152	GDS-ppan-MC-MMAF-
	LSWLLRLLN-K121
SEQ ID	anti-hHER2-HC-T135-	21494	16931	0.8
NO: 157	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S136
SEQ ID	anti-hHER2-HC-S136-	22833	23533	1.0
NO: 158	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G137
SEQ ID	anti-hHER2-HC-A162-	11178	10981	1.0
NO: 166	GDS-ppan-MC-MMAF-
	LSWLLRLLN-L163
SEQ ID	anti-hHER2-HC-T164-	20916	22125	1.1
NO: 168	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S165
SEQ ID	anti-hHER2-HC-S165-	23242	21304	0.9
NO: 169	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G166
SEQ ID	anti-hHER2-HC-P189-	8922	8840	1.0
NO: 173	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S190
SEQ ID	anti-hHER2-HC-G194-	20702	18593	0.9
NO: 178	GDS-ppan-MC-MMAF-
	LSWLLRLLN-T195
SEQ ID	anti-hHER2-HC-T195-	16083	17465	1.1
NO: 179	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q196
SEQ ID	anti-hHER2-HC-P271-	1757	1550	0.9
NO: 202	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E272
SEQ ID	anti-hHER2-HC-A330-	1362	1768	1.3
NO: 218	GDS-ppan-MC-MMAF-
	LSWLLRLLN-P331
SEQ ID	anti-hHER2-HC-K340-	17396	16060	0.9
NO: 220	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G341
SEQ ID	anti-hHER2-HC-G341-	9214	10336	1.1
NO: 221	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q342
SEQ ID	anti-hHER2-HC-R344-	15196	16061	1.1
NO: 224	GDS-ppan-MC-MMAF-
	LSWLLRLLN-E345
SEQ ID	anti-hHER2-HC-K360-	7867	8209	1.0
NO: 229	GDS-ppan-MC-MMAF-
	LSWLLRLLN-N361
SEQ ID	anti-hHER2-HC-E388-	14224	14887	1.0
NO: 127	GDS-ppan-MC-MMAF-
	LSWLLRLLN-N389
SEQ ID	anti-hHER2-HC-Q418-	8561	6136	0.7
NO: 239	GDS-ppan-MC-MMAF-
	LSWLLRLLN-Q419
SEQ ID	anti-hHER2-HC-N434-	2378	2249	0.9
NO: 244	GDS-ppan-MC-MMAF-
	LSWLLRLLN-H435
SEQ ID	anti-hHER2-HC-P445-	28334	24130	0.9
NO: 248	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G446
SEQ ID	anti-hHER2-HC-S119-	22854	24551	1.1
NO: 250	DS-ppan-MC-MMAF-
	LEFIASKLA-T120
SEQ ID	anti-hHER2-HC-T120-	21689	19734	0.9
NO: 251	DS-ppan-MC-MMAF-
	LEFIASKLA-K121
SEQ ID	anti-hHER2-HC-S136-	27232	24064	0.9
NO: 257	DS-ppan-MC-MMAF-
	LEFIASKLA-137
SEQ ID	anti-hHER2-HC-G138-	17184	15404	0.9
NO: 259	DS-ppan-MC-MMAF-
	LEFIASKLA-T139
SEQ ID	anti-hHER2-HC-S165-	12794	13854	1.1
NO: 268	DS-ppan-MC-MMAF-
	LEFIASKLA-G166
SEQ ID	anti-hHER2-HC-G194-	20659	21603	1.0
NO: 277	DS-ppan-MC-MMAF-
	LEFIASKLA-T195
SEQ ID	anti-hHER2-HC-L328-	7590	8039	1.1
NO: 315	DS-ppan-MC-MMAF-
	LEFIASKLA-P329
SEQ ID	anti-hHER2-HC-A330-	12960	14302	1.1
NO: 317	DS-ppan-MC-MMAF-
	LEFIASKLA-P331
SEQ ID	anti-hHER2-HC-E388-	21023	21257	1.0
NO: 129	DS-ppan-MC-MMAF-
	LEFIASKLA-N389
SEQ ID	anti-hHER2-HC-G446-	20329	16452	0.8
NO: 349	DS-ppan-MC-MMAF-
	LEFIASKLA-K447
SEQ ID	anti-hHER2-LC-V110-	17358	18734	1.1
NO: 32	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A111
SEQ ID	anti-hHER2-LC-A111-	21011	20711	1.0
NO: 33	GDS-ppan-MC-MMAF-
	LSWLLRLLN-A112
SEQ ID	anti-hHER2-LC-Q155-	15444	17657	1.1
NO: 46	GDS-ppan-MC-MMAF-
	LSWLLRLLN-S156
SEQ ID	anti-hHER2-LC-S162-	11348	11645	1.0
NO: 48	GDS-ppan-MC-MMAF-
	LSWLLRLLN-V163
SEQ ID	anti-hHER2-LC-Q199-	16832	17973	1.1
NO: 56	GDS-ppan-MC-MMAF-
	LSWLLRLLN-G200
SEQ ID	anti-hHER2-LC-V110-	20373	24757	1.2
NO: 63	DS-ppan-MC-MMAF-
	LEFIASKLA-A111
SEQ ID	anti-hHER2-LC-A111-	16092	16196	1.0
NO: 64	DS-ppan-MC-MMAF-
	LEFIASKLA-A112
SEQ ID	anti-hHER2-LC-A153-	18406	19496	1.1
NO: 75	DS-ppan-MC-MMAF-
	LEFIASKLA-L154
SEQ ID	anti-hHER2-LC-L201-	17223	15036	0.9
NO: 89	DS-ppan-MC-MMAF-
	LEFIASKLA-S202
aName represents part of the HC or LC that contains the peptide tag with the attached compound, the paired wildtype chain is not listed.
bArea-under-the-curve measured by anti-human IgG ELISA.
cArea-under-the-curve measured by anti-MMAF ELISA.

Example 26. Labeling of Peptide-Tagged IgGs with a Co-Expressed 4′-Phospho-Pantetheinyl Transferase in Culture Medium

In order to streamline the process of preparing ADCs, enzymatic labeling of peptide-tagged antibodies with co-expressed 4′-phosphopantetheinyl transferase (PPTase) was carried out in Freestyle™ expression media (Invitrogen). In addition to reducing the number of purification steps, co-expression of the PPTase during antibody production could circumvent problems associated with the addition and the removal of a recombinantly produced version of such an enzyme. As a proof-of-concept, AcpS PPTase from E. coli was used to site-specifically conjugate an A1-tagged antibody with acetyl coenzyme A (acetyl CoA) in culture medium.

To facilitate co-expression, the gene encoding the AcpS PPTase was cloned into the mammalian expression vector pRS, which appends the N-terminal signal sequence MKTFILLLVVVLLLWVIFLLPGATA (SEQ ID NO: 355). The construct, pRS-AcpS, also adds a C-terminal His₆ tag to the recombinant enzyme. To co-express the A1-tagged antibody mAb2-HC-E388-GDSLDMLEWSLM-N389 (SEQ ID NO:356), an oligonucleotide fragment encoding the 12-amino-acid A1 peptide sequence was inserted into the heavy chain gene of the antibody mAb2-HC in the mammalian expression vector pM4, resulting in the construct pM4-A1. This plasmid also co-expresses the corresponding light chain under the CMV promoter. Using the PEI method (Meissner et al., 2001), 293 Freestyle™ cells were transiently transfected with a 1:1 mixture of the recombinant expression plasmids pM4-A1 and pRS-AcpS, and cultured in 50 mL of Freestyle™ expression media (Invitrogen) for five days at 37° C. under 5% CO₂. Next, the cell culture was harvested by centrifugation at 3,000 rpm for 10 min and passed through a 0.22 m filter. To mimic the higher concentrations that can be expected with production cell lines, the filtrate was concentrated about 30-fold using a 30 kDa cut-off Amicon Ultra centrifugal filter unit (EMD Millipore). After removing precipitate by centrifugation at 20,800×g for 1 min, 900 μL of the concentrate was supplemented with 100 μL of 10-fold reaction buffer (pH 8.8) containing 750 mM of Tris-HCl and 100 mM of MgCl₂. The labeling reaction was then initiated by adding 20 μL of 25 mM acetyl CoA (Sigma-Aldrich) to 480 μL of the concentrate, yielding a final concentration of 1 mM of acetyl CoA substrate (Exp. #1). To test whether labeling of the A1-tagged antibody can occur in the absence of exogenously added acetyl CoA substrate, the remaining 500 μL of the concentrate were left untreated (Exp. #2). The two reaction mixtures were incubated for approximately 16 h at 37° C.

To determine the degree of labeling of the A1-tagged antibody as well as to quantify expression levels of both enzyme and antibody, the reaction mixtures were purified by Protein A and Ni-NTA affinity chromatography. Each reaction was diluted two-fold with PBS, and applied to Protein A-Sepharose columns (0.5 mL bed volume, GE Healthcare) at an approximate flowrate of 1 mL/min. The column flowthrough was directly applied to PBS-equilibrated IMAC columns filled with 0.5 mL of Ni-NTA Agarose (Qiagen). Protein A and Ni-NTA affinity columns were washed with 20 column volumes of 50 mM of Tris-HCl buffer (pH 8) supplemented with 300 mM of NaCl and 20 mM of imidazole. His₆-tagged AcpS enzyme was eluted from the Ni-NTA affinity columns with 5 column volumes of 50 mM of Tris-HCl buffer (pH 8) containing 300 mM of NaCl and 250 mM of imidazole. Likewise, the A1-tagged antibody was eluted from the Protein A affinity columns with 5 column volumes of 0.1 M sodium acetate buffer (pH 3.0) followed by immediate neutralization with 1 M of Tris-HCl buffer (pH 10).

SDS-PAGE and ESI-MS confirmed elution of A1-tagged antibody and AcpS enzyme, respectively. UV-Vis and Bradford measurements indicated that approximately 0.3 to 0.4 mg of A1-tagged antibody and 0.08 to 0.2 mg of AcpS enzyme were recovered (Table 26). This suggests an antibody concentration of approximately 4-5 μM (0.6-0.8 mg/mL) during the labeling reactions in cell culture medium.

TABLE 26
Expression yields of mAb2-HC-E388-GDSLDMLEWSLM-N389
and AcpS PPTase as well as mass spectrometric evaluation
of enzymatic labeling in cell culture medium.
		Yield of
	Yield of	mAb2-HC-E388-
	AcpS	GDSLDMLEWSLM-	Observed	Expected
	PPTase	N389	mass	mass
Exp.	(mg)	(mg)	(Da)	(Da)a
Exp.	0.08	0.3	51926.79	Uncoupled, 51589.2
#1				Coupled, 51971.6
Exp.	0.2	0.4	51586.41	Coupled and
#2				deacetylated,
				51929.6
aExpected masses are shown for pyroglutamic acid formation of the N-terminal glutamine residue of the heavy chain after signal peptide cleavage.

The antibody sample of Exp. #1 was reduced and deglycosylated followed by mass spectrometric analysis on an Agilent 6520 Q-TOF instrument (Agilent Technologies). The corresponding sample of Exp. #2 served as a control in order to rule out potential “in-medium” labeling of the A1-tagged antibody via an endogenous source of CoA or an analog thereof. As shown in Table 26, quantitative conjugation of the A1-tagged antibody was observed in the presence of 1 mM of acetyl CoA substrate (Exp. #1). In contrast, no detectable formation of the antibody conjugate was found when acetyl CoA was omitted (Exp. #2), thereby excluding the presence of significant amounts of CoA or one of its analogs in the cell-culture medium. Notably, the antibody conjugate of Exp. #1 completely lacks the acetyl group of the acetyl CoA substrate which indicates hydrolysis of the thioester bond by nucleophilic components in the conditioned cell-culture medium. The formation of a free thiol group after deacetylation in cell-culture medium could enable a two-step preparation of peptide-tagged ADCs. Following Protein A purification, the antibody with the in situ generated free thiol group could be reacted with a maleimide-toxin conjugate to afford the corresponding ADC in the second step. In summary, the experiment demonstrates that a peptide-tagged antibody can be quantitatively labeled with a supplemented CoA analog in 30-fold concentrated cell-culture medium via PPTase catalysis.

Example 27. In Vivo Efficacy Assessment of a ybbR-Tagged Trastuzumab MMAF ADC

The in vivo efficacy of the ybbR-tagged trastuzumab ADC anti-hHER2-HC-E388-DS-ppan-MC-MMAF-LEFIASKLA-N389 (SEQ ID NO:129) was assessed by using a xenograft tumor model, which is based on the implantation of a human tumor cell line into immune-deficient nude mice. As described previously (Sausville and Burger, 2006), studies with such tumor xenograft mice have provided valuable insights into the in vivo efficacy of anti-cancer reagents. Specifically, the in vivo efficacy study was carried out with nu/nu mice that were subcutaneously injected with MDA-MB231 clone 16 cells (Morton and Houghton, 2007). This cell line was chosen based on previous in vitro potency assays revealing its high sensitivity to the aforementioned ybbR-tagged MMAF ADC in an antigen dependent manner (see Table 24). After the tumor reached a size of about 200 mm³, the ybbR-tagged MMAF ADC was intravenously injected in a single dose at either 5 mg/kg or 3 mg/kg, with each treatment group comprising nine mice. After administering the antibody-drug conjugate, the tumor growth was monitored weekly. As shown in FIG. 20, i.v. administration of the ybbR-tagged MMAF ADC caused tumor regression at both dose levels. Furthermore, the treatment of the mice with the ADC was well tolerated with no weight loss observed in any of the treatment groups. The effective regression of MDA-MB231 clone 16 tumors at single doses as low as 3 mg/kg demonstrates that the ybbR-tagged ADC is efficacious in a HER2-dependent tumor mouse model. All animal studies were conducted in accordance with the Guide for the Care and Use of Laboratory Animals (NIH publication; National Academy Press, 8^th edition, 2001).

Informal Sequence Listing
SEQ ID NO: 1
GDSLSWLLRLLN
SEQ ID NO: 2
GDSLSWL
SEQ ID NO: 3
GDSLSWLVRCLN
SEQ ID NO: 4
GDSLSWLLRCLN
SEQ ID NO: 5
GDSLSWLVRLLN
SEQ ID NO: 6
GDSLSWLLRSLN
SEQ ID NO: 7
GSQDVLDSLEFIASKLA
SEQ ID NO: 8
VLDSLEFIASKLA
SEQ ID NO: 9
DSLEFIASKLA
SEQ ID NO: 10
GDSLDMLEWSLM
SEQ ID NO: 11
GDSLDMLEWSL
SEQ ID NO: 12
GDSLDMLEWS
SEQ ID NO: 13
GDSLDMLEW
SEQ ID NO: 14
DSLDMLEW
SEQ ID NO: 15
GDSLDM
SEQ ID NO: 16
LDSVRMMALAAR
SEQ ID NO: 17
LDSLDMLEWSLR
SEQ ID NO: 18
DSLEFIASKL
SEQ ID NO: 19
DSLEFIASK
SEQ ID NO: 20
DVLDSLEFI
SEQ ID NO: 21
VLDSLEFIAS
SEQ ID NO: 22, Homo sapiens PPTase (with N-terminal
His6 tag after signal peptide cleavage):
QPHHHHHHVFPAKRFCLVPSMEGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQ
FVFARDAKAAMAGRLMIRKLVAEKLNIPWNHIRLQRTAKGKPVLAKDSSNPYPNFNFNI
SHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWT
QLDMFYRNWALKESFIKAIGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDGEEEKE
WAFEESKIDEHHFVAVALRKPDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVPMT
PEDPSFWDCFCFTEEIPIRNGTKS
SEQ ID NO: 23, Homo sapiens PPTase (with C-terminal
His6 tag after signal peptide cleavage):
QPVFPAKRFCLVPSMEGVRWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARD
AKAAMAGRLMIRKLVAEKLNIPWNHIRLQRTAKGKPVLAKDSSNPYPNFNFNISHQGDY
AVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQLDMFY
RNWALKESFIKAIGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDGEEEKEWAFEES
KIDEHHFVAVALRKPDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVPMTPEDPSF
WDCFCFTEEIPIRNGTKSHHHHHH
IgG sequences after signal peptide removal (according to
SignalP 3.0 Server, Technical University of Denmark).
Light chain constructs:
SEQ ID NO: 24, Ig kappa light chain C region:
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNX5LQSGNSQESVTE
QDSKDSTYSLSSTLTLSKADYEKHKX6YACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 25, mAb2-LC:
PKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQ
SNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
SEQ ID NO: 26, anti-hHER2-LC-I2-GDSLSWLLRLLN-Q3:
DIGDSLSWLLRLLNQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKL
LIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEI
KRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVT
EQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 27, anti-hHER2-LC-I2-DSLEFIASKLA-Q3:
DIDSLEFIASKLAQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLI
YSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIK
RTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTE
QDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 28, anti-hHER2-LC-C214-GDSLSWLLRLLN:
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECGDSLSWLLRL
LN
SEQ ID NO: 29, anti-hHER2-LC-C214-DSLEFIASKLA:
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECDSLEFIASKLA
SEQ ID NO: 30, anti-hHER2-LC-576D-S77-L78-EFIASKLA-Q79:
DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVP
SRFSGSRSGTDFTLTIDSLEFIASKLAQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVA
APSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSK
DSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 31, anti-hHER2-LC-T109-GDSLSWLLRLLN-V110
TGDSLSWLLRLLNVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 32, anti-hHER2-LC-V110-GDSLSWLLRLLN-A111
TVGDSLSWLLRLLNAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 33, anti-hHER2-LC-A111-GDSLSWLLRLLN-A112
TVAGDSLSWLLRLLNAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 34, anti-hHER2-LC-P119-GDSLSWLLRLLN-P120
TVAAPSVFIFPGDSLSWLLRLLNPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 35, anti-hHER2-LC-P120-GDSLSWLLRLLN-S121
TVAAPSVFIFPPGDSLSWLLRLLNSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
4
SEQ ID NO: 36, anti-hHER2-LC-S121-GDSLSWLLRLLN-D122
TVAAPSVFIFPPSGDSLSWLLRLLNDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 37, anti-hHER2-LC-D122-GDSLSWLLRLLN-E123
TVAAPSVFIFPPSDGDSLSWLLRLLNEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 38, anti-hHER2-LC-Y140-GDSLSWLLRLLN-P141
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYGDSLSWLLRLLNPREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 39, anti-hHER2-LC-P141-GDSLSWLLRLLN-R142
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPGDSLSWLLRLLNREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 40, anti-hHER2-LC-R142-GDSLSWLLRLLN-E143
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPRGDSLSWLLRLLNEAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 41, anti-hHER2-LC-E143-GDSLSWLLRLLN-A144
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREGDSLSWLLRLLNAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 42, anti-hHER2-LC-D151-GDSLSWLLRLLN-N152
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDGDSLSWLLRLLNNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 43, anti-hHER2-LC-N152-GDSLSWLLRLLN-A153
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNGDSLSWLLRLLNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 44, anti-hHER2-LC-A153-GDSLSWLLRLLN-L154
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAGDSLSWLLRLLNL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 45, anti-hHER2-LC-L154-GDSLSWLLRLLN-Q155
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALGDSLSWLLRLLN
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 46, anti-hHER2-LC-Q155-GDSLSWLLRLLN-S156
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQGDSLSWLLRLL
NSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 47, anti-hHER2-LC-E161-GDSLSWLLRLLN-S162
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQEGDSLS
WLLRLLNSVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 48, anti-hHER2-LC-S162-GDSLSWLLRLLN-V163
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESGDSL
SWLLRLLNVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 49, anti-hHER2-LC-V163-GDSLSWLLRLLN-T164
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVGDS
LSWLLRLLNTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
C
SEQ ID NO: 50, anti-hHER2-LC-T164-GDSLSWLLRLLN-E165
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTGD
SLSWLLRLLNEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 51, anti-hHER2-LC-E165-GDSLSWLLRLLN-Q166
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEG
DSLSWLLRLLNQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 52, anti-hHER2-LC-Q166-GDSLSWLLRLLN-D167
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
GDSLSWLLRLLNDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 53, anti-hHER2-LC-D167-GDSLSWLLRLLN-S168
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DGDSLSWLLRLLNSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 54, anti-hHER2-LC-T197-GDSLSWLLRLLN-H198
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTGDSLSWLLRLLNHQGLSSPVTKSFNRG
EC
SEQ ID NO: 55, anti-hHER2-LC-H198-GDSLSWLLRLLN-Q199
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHGDSLSWLLRLLNQGLSSPVTKSFNRG
EC
SEQ ID NO: 56, anti-hHER2-LC-Q199-GDSLSWLLRLLN-G200
6
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGDSLSWLLRLLNGLSSPVTKSFNRG
EC
SEQ ID NO: 57, anti-hHER2-LC-G200-GDSLSWLLRLLN-L201
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGGDSLSWLLRLLNLSSPVTKSFNRG
EC
SEQ ID NO: 58, anti-hHER2-LC-L201-GDSLSWLLRLLN-S202
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLGDSLSWLLRLLNSSPVTKSFNRG
EC
SEQ ID NO: 59, anti-hHER2-LC-S202-GDSLSWLLRLLN-S203
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSCDSLSWLLRLLNSPVTKSFNRG
EC
SEQ ID NO: 60, anti-hHER2-LC-S203-GDSLSWLLRLLN-P204
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSGDSLSWLLRLLNPVTKSFNRG
EC
SEQ ID NO: 61, anti-hHER2-LC-K207-GDSLSWLLRLLN-S208
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKGDSLSWLLRLLNSFNRG
EC
SEQ ID NO: 62, anti-hHER2-LC-T109-DSLEFIASKLA-V110
TDSLEFIASKLAVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 63, anti-hHER2-LC-V110-DSLEFIASKLA-A111
TVDSLEFIASKLAAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 64, anti-hHER2-LC-A111-DSLEFIASKLA-A112
TVADSLEFIASKLAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 65, anti-hHER2-LC-P119-DSLEFIASKLA-P120
TVAAPSVFIFPDSLEFIASKLAPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 66, anti-hHER2-LC-P120-DSLEFIASKLA-S121
TVAAPSVFIFPPDSLEFIASKLASDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 67, anti-hHER2-LC-S121-DSLEFIASKLA-D122
TVAAPSVFIFPPSDSLEFIASKLADEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 68, anti-hHER2-LC-D122-DSLEFIASKLA-E123
TVAAPSVFIFPPSDDSLEFIASKLAEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 69, anti-hHER2-LC-Y140-DSLEFIASKLA-P141
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYDSLEFIASKLAPREAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 70, anti-hHER2-LC-P141-DSLEFIASKLA-R142
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPDSLEFIASKLAREAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 71, anti-hHER2-LC-R142-DSLEFIASKLA-E143
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPRDSLEFIASKLAEAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 72, anti-hHER2-LC-E143-DSLEFIASKLA-A144
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREDSLEFIASKLAAKVQWKVDNALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 73, anti-hHER2-LC-D151-DSLEFIASKLA-N152
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDDSLEFIASKLANALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 74, anti-hHER2-LC-N152-DSLEFIASKLA-A153
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNDSLEFIASKLAALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 75, anti-hHER2-LC-A153-DSLEFIASKLA-L154
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNADSLEFIASKLALQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 76, anti-hHER2-LC-L154-DSLEFIASKLA-Q155
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALDSLEFIASKLAQS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 77, anti-hHER2-LC-Q155-DSLEFIASKLA-S156
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQDSLEFIASKLAS
GNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 78, anti-hHER2-LC-E161-DSLEFIASKLA-S162
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQEDSLEFI
ASKLASVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 79, anti-hHER2-LC-S162-DSLEFIASKLA-V163
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESDSLE
FIASKLAVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 80, anti-hHER2-LC-V163-DSLEFIASKLA-T164
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVDSL
EFIASKLATEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 81, anti-hHER2-LC-T164-DSLEFIASKLA-E165
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTDS
LEFIASKLAEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 82, anti-hHER2-LC-E165-DSLEFIASKLA-Q166
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTED
SLEFIASKLAQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 83, anti-hHER2-LC-Q166-DSLEFIASKLA-D167
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSLEFIASKLADSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 84, anti-hHER2-LC-D167-DSLEFIASKLA-S168
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DDSLEFIASKLASKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEQ ID NO: 85, anti-hHER2-LC-T197-DSLEFIASKLA-H198
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTDSLEFIASKLAHQGLSSPVTKSFNRGEC
SEQ ID NO: 86, anti-hHER2-LC-H198-DSLEFIASKLA-Q199
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHDSLEFIASKLAQGLSSPVTKSFNRGEC
SEQ ID NO: 87, anti-hHER2-LC-Q199-DSLEFIASKLA-G200
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQDSLEFIASKLAGLSSPVTKSFNRGEC
SEQ ID NO: 88, anti-hHER2-LC-G200-DSLEFIASKLA-L201
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGDSLEFIASKLALSSPVTKSFNRGEC
SEQ ID NO: 89, anti-hHER2-LC-L201-DSLEFIASKLA-S202
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLDSLEFIASKLASSPVTKSFNRGEC
SEQ ID NO: 90, anti-hHER2-LC-S202-DSLEFIASKLA-S203
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSDSLEFIASKLASPVTKSFNRGEC
SEQ ID NO: 91, anti-hHER2-LC-S203-DSLEFIASKLA-P204
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSDSLEFIASKLAPVTKSFNRGEC
SEQ ID NO: 92, anti-hHER2-LC-K207-DSLEFIASKLA-S208
TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ
DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKDSLEFIASKLASFNRGEC
Heavy chain constructs:
SEQ ID NO: 93, Ig gamma-1 heavy chain C region:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKX1NEPKSCDKTHTCPPCPAPEL
LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR
EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTL
PPSRX2EX3TKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYS
KLTVDKSRWQQGNVFSCSVMHEX4LHNHYTQKSLSLSPG
SEQ ID NO: 94, anti-hHER2-HC-V2-GDSLSWLLRLLN-Q3:
EVGDSLSWLLRLLNQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLE
WVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDG
FYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS
WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
EPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVK
FNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP
IEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENN
YKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 95, anti-hHER2-HC-V2-DSLEFIASKLA-Q3:
EVDSLEFIASKLAQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEW
VARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFY
AMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN
SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
SCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFN
WYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIE
KTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNY
KTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 96, anti-hHER2-HC-V2-GDSLDMLEWSLM-Q3:
EVGDSLDMLEWSLMQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGL
EWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGD
GFYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS
WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
EPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVK
FNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP
IEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENN
YKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 97, anti-hHER2-HC-563-LEFIASK-V64:
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYT
RYADSLEFIASKVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDY
WGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 98, anti-hHER2-HC-V64L-EFIAS-K65:
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYT
RYADSLEFIASKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYW
GQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTS
GVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
TCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGV
EVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 99, anti-hHER2-HC-V64L-EFIASKLA-K65:
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYT
RYADSLEFIASKLAKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMD
YWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGA
LTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
KTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV
DGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK
AKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP
PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 100, anti-hHER2-HC-S132G-K133D-S134-T135L-S136-
G137W-G138L:
STKGPSVFPLAPSGDSLSWLTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSWTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 101, anti-hHER2-HC-S132G-K133D-S134-T135L-S136-
G137W-G138LT139L-A140R-A141L-L142-G143N:
STKGPSVFPLAPSGDSLSWLLRLLNCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 102, anti-hHER2-HC-S132D-K133S-S134L-T135E-
S136F-G137I-G138AT139S-A140K-A141L-L142A:
STKGPSVFPLAPSDSLEFIASKLAGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSS
GLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLG
GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREE
QYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPP
SREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLT
VDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 103, anti-hHER2-HC-K133G-S134D-T135S-S136L-
G137S-G138WLLRLLN-T139:
STKGPSVFPLAPSSGDSLSWLLRLLNTAALGCLVKDYFPEPVTVSWNSGALTSGVHTF
PAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPC
PAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNA
KTKPREEQYNSTYRWSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREP
QVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSF
FLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 104, anti-hHER2-HC-S134G-T135D-G137L-G1385-
WLLRLLN-A141:
STKGPSVFPLAPSSKGDSLSWLALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 105, anti-hHER2-HC-S134G-T135D-S136-G137L-
G1385-T139W-A140L:
STKGPSVFPLAPSSKGDSLSWLALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 106, anti-hHER2-HC-Sl34G-T135D-S136-G137L-
G1385-T139W-A140LLRLLN-A141:
STKGPSVFPLAPSSKGDSLSWLLRLLNALGCLVKDYFPEPVTVSWNSGALTSGVHTFP
AVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCP
APELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK
TKPREEQYNSTYRWSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREP
QVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSF
FLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 107, anti-hHER2-HC-Sl34G-T135D-S136-G137L-
G1385-T139W-A140LA141L-L142R-G143L-C144L-L145N:
STKGPSVFPLAPSSKGDSLSWLLRLLNVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 108, anti-hHER2-HC-T135G-S136D-G137S-G138L-
T1395-WLLRLLNA140:
STKGPSVFPLAPSSKSGDSLSWLLRLLNAALGCLVKDYFPEPVTVSWNSGALTSGVHT
FPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPP
CPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHN
AKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPRE
PQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGS
FFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 109, anti-hHER2-HC-P189G-S190D-S191-S192L-
L193S-G194W-T195L:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVGDSLSWLQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPEL
LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR
EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTL
PPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSK
LTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 110, anti-hHER2-HC-P189G-S190D-S191-S192L-
L193S-G194W-T195LLRLLN-Q196:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVGDSLSWLLRLLNQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPC
PAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNA
KTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREP
QVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSF
FLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 111, anti-hHER2-HC-P189G-S190D-S191-S192L-
L193S-G194W-T195LQ196L-T197R-Y198L-1199L-C200N:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVGDSLSWLLRLLNNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPEL
LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR
EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTL
PPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSK
LTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 112, anti-hHER2-HC-P189D-S190-S191L-S192E-
L193F-G194I-T195AQ196S-T197K-Y198L-I199A:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVDSLEFIASKLACNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 113, anti-hHER2-HC-S190G-S191D-S192-L193-
G194S-T195W-Q196LT197L-RLLN-Y198:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPGDSLSWLLRLLNYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPA
PELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKT
KPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQ
VYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFF
LYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 114, anti-hHER2-HC-S190D-S191-S192L-L193E-
G194F-T195I-Q196AT197S-Y198K-1199L:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPDSLEFIASKLCNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 115, anti-hHER2-HC-S190D-S191-S192L-L193E-
G194F-T195I-Q196AT197S-Y198K-I199L-C200A:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPDSLEFIASKLANVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 116, anti-hHER2-HC-S191D-S192-L193-G194E-
T195F-Q196I-T197AY198S-I199K:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSDSLEFIASKCNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 117, anti-hHER2-HC-L193G-G194D-T1955-Q196L-
T1975-Y198W-I199L:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSGDSLSWLCNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPEL
LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR
EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTL
PPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSK
LTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 118, anti-hHER2-HC-Ll93G-G 194D-T1955-
Q196L-T197S-Y198W-I199LLRLLN-C200:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSGDSLSWLLRLLNCNVNHKPSNTKVDKKVEPKSCDKTHTCPPC
PAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNA
KTKPREEQYNSTYRWSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREP
QVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSF
FLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 119, anti-hHER2-HC-L193G-G194D-T1955-Q196L-
T1975-Y198W-I199LC200L-N201R-V202L-N203L-H204N:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSGDSLSWLLRLLNKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 120, anti-hHER2-HC-E357G-M358D-T359S-K360L-
N361S-Q362W-V363L:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREGDSLSWLSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 121, anti-hHER2-HC-T359-GDSLSWLLRLLN-K360:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTGDSLSWLLRLLNKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 122, anti-hHER2-HC-T359-DSLEFIASKLA-K360:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTDSLEFIASKLAKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 123, anti-hHER2-HC-T359G-K360D-N361S-Q362L-
V3635-S364W:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMGDSLSWLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 124, anti-hHER2-HC-E382D-S383-N384L-G3855-
Q386W-P387L-E388L:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWDSLSWLLNNYKTTPPVLDSDGSFFLYSKLT
VDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 125, anti-hHER2-HC-E382D-S383-N384L-G385E-
Q386F-P387I-E388A:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWDSLEFIANNYKTTPPVLDSDGSFFLYSKLT
VDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 126, anti-hHER2-HC-E388-GDSLSWL-N389:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPEGDSLSWLNNYKTTPPVLDSDG
SFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 127, anti-hHER2-HC-E388-GDSLSWLLRLLN-N389:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPEGDSLSWLLRLLNNNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 128, anti-hHER2-HC-E388-GDALSWLLRLLN-N389:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPEGDALSWLLRLLNNNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 129, anti-hHER2-HC-E388-DSLEFIASKLA-N389:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPEDSLEFIASKLANNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 130, anti-hHER2-HC-E388-DSLEFIASKL-N389:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPEDSLEFIASKLNNYKTTPPVLDSD
GSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 131, anti-hHER2-HC-E388-DSLEFIASK-N389:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPEDSLEFIASKNNYKTTPPVLDSD
GSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 132, anti-hHER2-HC-E388-GDSLDMLEWSLM-N389:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPEGDSLDMLEWSLMNNYKTTPPV
LDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 133, anti-hHER2-HC-L398G-D401L-G402S-S403W-
F404L:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVGDSLSWLFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 134, anti-hHER2-HC-L398G-D399-S400-D401L-
G402S-5403W-F404LLRLLN-F405:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVGDSLSWLLRLLNF
LYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 135, anti-hHER2-HC-L398D-D399S-S400L-D401E-
G402F-S403I-F404AF405S-L406K-Y407L-S408A:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVDSLEFIASKLAKLT
VDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 136, anti-hHER2-HC-S400-GDSLSWLLRLLN-D401:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSGDSLSWLLRL
LNDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 137, anti-hHER2-HC-D413-K414S-S415L-R4165-
W417-Q418L-Q419LG420R-N421L-V422L:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDSLSWLLRLLFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 138, anti-hHER2-HC-D413-K414S-S415L-R416E-
W417F-Q4181-Q419AG420S-N421K-V422L:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDSLEFIASKLFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 139, anti-hHER2-HC-G446-GDSLSWLLRLLN-K447:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGGDSLSWLLRLLN
SEQ ID NO: 140, anti-hHER2-HC-K447-GDSLSWLLRLLN:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGKGDSLSWLLRLLN
SEQ ID NO: 141, anti-hHER2-HC-K447-DSLEFIASKLA:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGKDSLEFIASKLA
SEQ ID NO: 142, anti-hHER2-HC-V2-GDSLSWLLRLLN-Q3-E388-
DSLEFIASKLA-N389:
EVGDSLSWLLRLLNQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLE
WVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDG
FYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS
WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
EPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVK
FNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP
IEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPEDS
LEFIASKLANNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYT
QKSLSLSPG
SEQ ID NO: 143, anti-hHER2-HC-Y296-GDSLSWLLRLLN-N297:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYGDSLSWLLRLLNNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 144, anti-hHER2-HC-Y296-DSLEFIASKLA-N297:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYDSLEFIASKLANSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 145, anti-hHER2-HC-N297-CDSLSWLLRLLN-S298:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNGDSLSWLLRLLNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 146, anti-hHER2-HC-N297-DSLEFIASKLA-S298:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNDSLEFIASKLASTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 147, mAb2-HC:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 148, mAb2-HC-T359-CDSLSWLLRLLN-K360:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTGDSLSWLLRLLNKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 149, mAb2-HC-E388-GDSLSWLLRLLN-N389:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPEGDSLSWLLRLLNNNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 150, anti-hHER2-HC-A118-GDSLSWLLRLLN-S119
GDSLSWLLRLLNSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 151, anti-hHER2-HC-S119-GDSLSWLLRLLN-T120
SGDSLSWLLRLLNTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 152, anti-hHER2-HC-T120-GDSLSWLLRLLN-K121
STGDSLSWLLRLLNKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 153, anti-hHER2-HC-S131-GDSLSWLLRLLN-S132
STKGPSVFPLAPSGDSLSWLLRLLNSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 154, anti-hHER2-HC-S132-GDSLSWLLRLLN-K133
STKGPSVFPLAPSSGDSLSWLLRLLNKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 155, anti-hHER2-HC-K133-GDSLSWLLRLLN-S134
STKGPSVFPLAPSSKGDSLSWLLRLLNSTSGGTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 156, anti-hHER2-HC-S134-GDSLSWLLRLLN-T135
STKGPSVFPLAPSSKSGDSLSWLLRLLNTSGGTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 157, anti-hHER2-HC-T135-GDSLSWLLRLLN-S136
STKGPSVFPLAPSSKSTGDSLSWLLRLLNSGGTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 158, anti-hHER2-HC-S136-GDSLSWLLRLLN-G137
STKGPSVFPLAPSSKSTSGDSLSWLLRLLNGGTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 159, anti-hHER2-HC-G137-GDSLSWLLRLLN-G138
STKGPSVFPLAPSSKSTSGGDSLSWLLRLLNGTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 160, anti-hHER2-HC-G138-GDSLSWLLRLLN-T139
STKGPSVFPLAPSSKSTSGGGDSLSWLLRLLNTAALGCLVKDYFPEPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 161, anti-hHER2-HC-E152-GDSLSWLLRLLN-P153
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEGDSLSWLLRLLNPVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 162, anti-hHER2-HC-P153-GDSLSWLLRLLN-V154
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPGDSLSWLLRLLNVTVSWNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 163, anti-hHER2-HC-N159-GDSLSWLLRLLN-S160
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNGDSLSWLLRLLNSGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 164, anti-hHER2-HC-S160-GDSLSWLLRLLN-G161
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGDSLSWLLRLLNGALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 165, anti-hHER2-HC-G161-GDSLSWLLRLLN-A162
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGGDSLSWLLRLLNALT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 166, anti-hHER2-HC-A162-GDSLSWLLRLLN-L163
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAGDSLSWLLRLLNLT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 167, anti-hHER2-HC-L163-GDSLSWLLRLLN-T164
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALGDSLSWLLRLLNT
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 168, anti-hHER2-HC-T164-GDSLSWLLRLLN-S165
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTGDSLSWLLRLLN
SGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 169, anti-hHER2-HC-S165-GDSLSWLLRLLN-G166
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGDSLSWLLRLL
NGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 170, anti-hHER2-HC-P171-GDSLSWLLRLLN-A172
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPGDSLS
WLLRLLNAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 171, anti-hHER2-HC-S176-GDSLSWLLRLLN-S177
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
GDSLSWLLRLLNSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 172, anti-hHER2-HC-S177-GDSLSWLLRLLN-G178
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGDSLSWLLRLLNGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 173, anti-hHER2-HC-P189-GDSLSWLLRLLN-S190
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPGDSLSWLLRLLNSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 174, anti-hHER2-HC-S190-GDSLSWLLRLLN-S191
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSGDSLSWLLRLLNSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 175, anti-hHER2-HC-S191-GDSLSWLLRLLN-S192
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSGDSLSWLLRLLNSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 176, anti-hHER2-HC-S192-GDSLSWLLRLLN-L193
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSGDSLSWLLRLLNLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 177, anti-hHER2-HC-L193-GDSLSWLLRLLN-G194
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGDSLSWLLRLLNGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 178, anti-hHER2-HC-G194-GDSLSWLLRLLN-T195
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGGDSLSWLLRLLNTQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 179, anti-hHER2-HC-T195-GDSLSWLLRLLN-Q196
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTGDSLSWLLRLLNQTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 180, anti-hHER2-HC-Q196-GDSLSWLLRLLN-T197
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQGDSLSWLLRLLNTYICNVNHKPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 181, anti-hHER2-HC-K205-GDSLSWLLRLLN-P206
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKGDSLSWLLRLLNPSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 182, anti-hHER2-HC-P206-GDSLSWLLRLLN-S207
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPGDSLSWLLRLLNSNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 183, anti-hHER2-HC-S207-GDSLSWLLRLLN-N208
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSGDSLSWLLRLLNNTKVDKKVEPKSCDKT
HTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 184, anti-hHER2-HC-P230-GDSLSWLLRLLN-A231
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPG DSL
SWLLRLLNAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 185, anti-hHER2-HC-A231-GDSLSWLLRLLN-P232
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAGDS
LSWLLRLLNPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 186, anti-hHER2-HC-P232-GDSLSWLLRLLN-E233
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPGD
SLSWLLRLLNELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 187, anti-hHER2-HC-E233-GDSLSWLLRLLN-L234
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPEG
DSLSWLLRLLNLLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 188, anti-hHER2-HC-L234-GDSLSWLLRLLN-L235
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELG
DSLSWLLRLLNLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 189, anti-hHER2-HC-L235-GDSLSWLLRLLN-G236
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GDSLSWLLRLLNGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 190, anti-hHER2-HC-G236-GDSLSWLLRLLN-G237
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGDSLSWLLRLLNGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 191, anti-hHER2-HC-P244-GDSLSWLLRLLN-P245
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPGDSLSWLLRLLNPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 192, anti-hHER2-HC-P245-GDSLSWLLRLLN-K246
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPGDSLSWLLRLLNKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 193, anti-hHER2-HC-I253-GDSLSWLLRLLN-S254
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMIGDSLSWLLRLLNSRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 194, anti-hHER2-HC-S254-GDSLSWLLRLLN-R255
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISGDSLSWLLRLLNRTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 195, anti-hHER2-HC-R255-GDSLSWLLRLLN-T256
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRGDSLSWLLRLLNTPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 196, anti-hHER2-HC-T256-CDSLSWLLRLLN-P257
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTGDSLSWLLRLLNPEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 197, anti-hHER2-HC-P257-GDSLSWLLRLLN-E258
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPGDSLSWLLRLLNEVTCVVVDVSHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 198, anti-hHER2-HC-S267-GDSLSWLLRLLN-H268
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSGDSLSWLLRLLNHEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 199, anti-hHER2-HC-H268-GDSLSWLLRLLN-E269
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHGDSLSWLLRLLNEDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 200, anti-hHER2-HC-E269-GDSLSWLLRLLN-D270
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEGDSLSWLLRLLNDPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 201, anti-hHER2-HC-D270-GDSLSWLLRLLN-P271
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDGDSLSWLLRLLNPEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 202, anti-hHER2-HC-P271-GDSLSWLLRLLN-E272
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPGDSLSWLLRLLNEVKFNWYVDG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 203, anti-hHER2-HC-D280-GDSLSWLLRLLN-G281
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGDSLSWLLRLLNG
VEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 204, anti-hHER2-HC-H285-GDSLSWLLRLLN-N286
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHGDSLSWLL
RLLNNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 205, anti-hHER2-HC-N286-GDSLSWLLRLLN-A287
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNGDSLSW
LLRLLNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 206, anti-hHER2-HC-P291-GDSLSWLLRLLN-R292
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPGD
SLSWLLRLLNREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 207, anti-hHER2-HC-T307-CDSLSWLLRLLN-V308
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTGDSLSWLLRLLNVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 208, anti-hHER2-HC-V308-GDSLSWLLRLLN-L309
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVGDSLSWLLRLLNLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 209, anti-hHER2-HC-L309-GDSLSWLLRLLN-H310
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLGDSLSWLLRLLNHQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 210, anti-hHER2-HC-H310-GDSLSWLLRLLN-Q311
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHGDSLSWLLRLLNQDWLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 211, anti-hHER2-HC-N315-GDSLSWLLRLLN-G316
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGDSLSWLLRLLNGKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 212, anti-hHER2-HC-G316-GDSLSWLLRLLN-K317
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGGDSLSWLLRLLNKEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 213, anti-hHER2-HC-K317-GDSLSWLLRLLN-E318
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKGDSLSWLLRLLNEYKCKVSNKALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 214, anti-hHER2-HC-K326-GDSLSWLLRLLN-A327
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKGDSLSWLLRLLNALPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 215, anti-hHER2-HC-A327-GDSLSWLLRLLN-L328
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKAGDSLSWLLRLLNLPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 216, anti-hHER2-HC-L328-GDSLSWLLRLLN-P329
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALGDSLSWLLRLLNPAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 217, anti-hHER2-HC-P329-GDSLSWLLRLLN-A330
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPGDSLSWLLRLLNAPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 218, anti-hHER2-HC-A330-GDSLSWLLRLLN-P331
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAGDSLSWLLRLLNPIEKTISKAK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 219, anti-hHER2-HC-A339-GDSLSWLLRLLN-K340
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAGDSLSWLLRLLNK
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 220, anti-hHER2-HC-K340-GDSLSWLLRLLN-G341
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGDSLSWLLRLLN
GQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 221, anti-hHER2-HC-G341-GDSLSWLLRLLN-Q342
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGGDSLSWLLRLL
NQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 222, anti-hHER2-HC-Q342-GDSLSWLLRLLN-P343
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQGDSLSWLLRL
LNPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 223, anti-hHER2-HC-P343-GDSLSWLLRLLN-R344
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPGDSLSWLL
RLLNREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPV
LDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 224, anti-hHER2-HC-R344-GDSLSWLLRLLN-E345
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPRGDSLSWL
LRLLNEPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPV
LDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 225, anti-hHER2-HC-R355-GDSLSWLLRLLN-E356
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSRGDSLSWLLRLLNEEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 226, anti-hHER2-HC-E356-GDSLSWLLRLLN-E357
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREGDSLSWLLRLLNEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 227, anti-hHER2-HC-E357-GDSLSWLLRLLN-M358
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEGDSLSWLLRLLNMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 228, anti-hHER2-HC-M358-GDSLSWLLRLLN-T359
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMGDSLSWLLRLLNTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 229, anti-hHER2-HC-K360-GDSLSWLLRLLN-N361
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKGDSLSWLLRLLNNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 230, anti-hHER2-HC-N384-GDSLSWLLRLLN-G385
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGDSLSWLLRLLNGQPENNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 231, anti-hHER2-HC-N389-GDSLSWLLRLLN-N390
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENGDSLSWLLRLLNNYKTTPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 232, anti-hHER2-HC-T394-GDSLSWLLRLLN-P395
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTGDSLSWLLRLLNPPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 233, anti-hHER2-HC-P395-GDSLSWLLRLLN-P396
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPGDSLSWLLRLLNPVL
DSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 234, anti-hHER2-HC-D399-GDSLSWLLRLLN-S400
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDGDSLSWLLRLL
NSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 235, anti-hHER2-HC-D401-GDSLSWLLRLLN-G402
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGDSLSWLLR
LLNGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 236, anti-hHER2-HC-S415-GDSLSWLLRLLN-R416
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSGDSLSWLLRLLNRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 237, anti-hHER2-HC-R416-GDSLSWLLRLLN-W417
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRGDSLSWLLRLLNWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 238, anti-hHER2-HC-W417-GDSLSWLLRLLN-Q418
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWGDSLSWLLRLLNQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 239, anti-hHER2-HC-Q418-GDSLSWLLRLLN-Q419
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQGDSLSWLLRLLNQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 240, anti-hHER2-HC-Q419-GDSLSWLLRLLN-G420
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGDSLSWLLRLLNGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 241, anti-hHER2-HC-G420-GDSLSWLLRLLN-N421
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGGDSLSWLLRLLNNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 242, anti-hHER2-HC-N421-GDSLSWLLRLLN-V422
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNGDSLSWLLRLLNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 243, anti-hHER2-HC-H433-CDSLSWLLRLLN-N434
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHGDSLSWLLRLLNNHYTQKSLSLSPG
SEQ ID NO: 244, anti-hHER2-HC-N434-CDSLSWLLRLLN-H435
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNGDSLSWLLRLLNHYTQKSLSLSPG
SEQ ID NO: 245, anti-hHER2-HC-5442-GDSLSWLLRLLN-L443
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSGDSLSWLLRLLNLSPG
SEQ ID NO: 246, anti-hHER2-HC-L443-GDSLSWLLRLLN-S444
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLGDSLSWLLRLLNSPG
SEQ ID NO: 247, anti-hHER2-HC-S444-CDSLSWLLRLLN-P445
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSGDSLSWLLRLLNPG
SEQ ID NO: 248, anti-hHER2-HC-P445-GDSLSWLLRLLN-G446
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGDSLSWLLRLLNG
SEQ ID NO: 249, anti-hHER2-HC-A118-DSLEFIASKLA-S119
DSLEFIASKLASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 250, anti-hHER2-HC-S119-DSLEFIASKLA-T120
SDSLEFIASKLATKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 251, anti-hHER2-HC-T120-DSLEFIASKLA-K121
STDSLEFIASKLAKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 252, anti-hHER2-HC-S131-DSLEFIASKLA-S132
STKGPSVFPLAPSDSLEFIASKLASKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 253, anti-hHER2-HC-S132-DSLEFIASKLA-K133
STKGPSVFPLAPSSDSLEFIASKLAKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 254, anti-hHER2-HC-K133-DSLEFIASKLA-S134
STKGPSVFPLAPSSKDSLEFIASKLASTSGGTAALGCLVKDYFPEPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 255, anti-hHER2-HC-S134-DSLEFIASKLA-T135
STKGPSVFPLAPSSKSDSLEFIASKLATSGGTAALGCLVKDYFPEPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 256, anti-hHER2-HC-T135-DSLEFIASKLA-S136
STKGPSVFPLAPSSKSTDSLEFIASKLASGGTAALGCLVKDYFPEPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 257, anti-hHER2-HC-S136-DSLEFIASKLA-G137
STKGPSVFPLAPSSKSTSDSLEFIASKLAGGTAALGCLVKDYFPEPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 258, anti-hHER2-HC-G137-DSLEFIASKLA-G138
STKGPSVFPLAPSSKSTSGDSLEFIASKLAGTAALGCLVKDYFPEPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 259, anti-hHER2-HC-G138-DSLEFIASKLA-T139
STKGPSVFPLAPSSKSTSGGDSLEFIASKLATAALGCLVKDYFPEPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 260, anti-hHER2-HC-E152-DSLEFIASKLA-P153
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEDSLEFIASKLAPVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 261, anti-hHER2-HC-P153-DSLEFIASKLA-V154
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPDSLEFIASKLAVTVSWNSGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 262, anti-hHER2-HC-N159-DSLEFIASKLA-S160
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNDSLEFIASKLASGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 263, anti-hHER2-HC-S160-DSLEFIASKLA-G161
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSDSLEFIASKLAGALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 264, anti-hHER2-HC-G161-DSLEFIASKLA-A162
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGDSLEFIASKLAALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 265, anti-hHER2-HC-A162-DSLEFIASKLA-L163
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGADSLEFIASKLALTSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 266, anti-hHER2-HC-L163-DSLEFIASKLA-T164
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALDSLEFIASKLATSG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 267, anti-hHER2-HC-T164-DSLEFIASKLA-S165
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTDSLEFIASKLASG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 268, anti-hHER2-HC-S165-DSLEFIASKLA-G166
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSDSLEFIASKLAG
VHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 269, anti-hHER2-HC-P171-DSLEFIASKLA-A172
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPDSLEFI
ASKLAAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 270, anti-hHER2-HC-S176-DSLEFIASKLA-S177
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
DSLEFIASKLASGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 271, anti-hHER2-HC-S177-DSLEFIASKLA-G178
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SDSLEFIASKLAGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 272, anti-hHER2-HC-P189-DSLEFIASKLA-S190
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPDSLEFIASKLASSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 273, anti-hHER2-HC-S190-DSLEFIASKLA-S191
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSDSLEFIASKLASSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 274, anti-hHER2-HC-S191-DSLEFIASKLA-S192
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSDSLEFIASKLASLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 275, anti-hHER2-HC-S192-DSLEFIASKLA-L193
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSDSLEFIASKLALGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 276, anti-hHER2-HC-L193-DSLEFIASKLA-G194
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLDSLEFIASKLAGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 277, anti-hHER2-HC-G194-DSLEFIASKLA-T195
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGDSLEFIASKLATQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 278, anti-hHER2-HC-T195-DSLEFIASKLA-Q196
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTDSLEFIASKLAQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 279, anti-hHER2-HC-Q196-DSLEFIASKLA-T197
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQDSLEFIASKLATYICNVNHKPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 280, anti-hHER2-HC-K205-DSLEFIASKLA-P206
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKDSLEFIASKLAPSNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 281, anti-hHER2-HC-P206-DSLEFIASKLA-S207
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPDSLEFIASKLASNTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 282, anti-hHER2-HC-S207-DSLEFIASKLA-N208
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSDSLEFIASKLANTKVDKKVEPKSCDKTHT
CPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 283, anti-hHER2-HC-P230-DSLEFIASKLA-A231
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPDSLEF
IASKLAAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 284, anti-hHER2-HC-A231-DSLEFIASKLA-P232
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPADSLE
FIASKLAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 285, anti-hHER2-HC-P232-DSLEFIASKLA-E233
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPDSL
EFIASKLAELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 286, anti-hHER2-HC-E233-DSLEFIASKLA-L234
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPED
SLEFIASKLALLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGV
EVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 287, anti-hHER2-HC-L234-DSLEFIASKLA-L235
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELD
SLEFIASKLALGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 288, anti-hHER2-HC-L235-DSLEFIASKLA-G236
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
DSLEFIASKLAGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 289, anti-hHER2-HC-G236-DSLEFIASKLA-G237
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GDSLEFIASKLAGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 290, anti-hHER2-HC-P244-DSLEFIASKLA-P245
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPDSLEFIASKLAPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 291, anti-hHER2-HC-P245-DSLEFIASKLA-K246
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPDSLEFIASKLAKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 292, anti-hHER2-HC-I253-DSLEFIASKLA-S254
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMIDSLEFIASKLASRTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 293, anti-hHER2-HC-5254-DSLEFIASKLA-R255
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISDSLEFIASKLARTPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 294, anti-hHER2-HC-R255-DSLEFIASKLA-T256
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRDSLEFIASKLATPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 295, anti-hHER2-HC-T256-DSLEFIASKLA-P257
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTDSLEFIASKLAPEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 296, anti-hHER2-HC-P257-DSLEFIASKLA-E258
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPDSLEFIASKLAEVTCVVVDVSHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 297, anti-hHER2-HC-S267-DSLEFIASKLA-H268
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSDSLEFIASKLAHEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 298, anti-hHER2-HC-H268-DSLEFIASKLA-E269
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHDSLEFIASKLAEDPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 299, anti-hHER2-HC-E269-DSLEFIASKLA-D270
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDSLEFIASKLADPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 300, anti-hHER2-HC-D270-DSLEFIASKLA-P271
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDDSLEFIASKLAPEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 301, anti-hHER2-HC-P271-DSLEFIASKLA-E272
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPDSLEFIASKLAEVKFNWYVDGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 302, anti-hHER2-HC-D280-DSLEFIASKLA-G281
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDDSLEFIASKLAGVE
VHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG
QPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 303, anti-hHER2-HC-H285-DSLEFIASKLA-N286
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHDSLEFIASK
LANAKTKPREEQYNSTYRWSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 304, anti-hHER2-HC-N286-DSLEFIASKLA-A287
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNDSLEFIAS
KLAAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 305, anti-hHER2-HC-P291-DSLEFIASKLA-R292
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPDS
LEFIASKLAREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 306, anti-hHER2-HC-T307-DSLEFIASKLA-V308
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTDSLEFIASKLAVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 307, anti-hHER2-HC-V308-DSLEFIASKLA-L309
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVDSLEFIASKLALHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 308, anti-hHER2-HC-L309-DSLEFIASKLA-H310
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLDSLEFIASKLAHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 309, anti-hHER2-HC-H310-DSLEFIASKLA-Q311
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHDSLEFIASKLAQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 310, anti-hHER2-HC-N315-DSLEFIASKLA-G316
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNDSLEFIASKLAGKEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 311, anti-hHER2-HC-G316-DSLEFIASKLA-K317
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGDSLEFIASKLAKEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 312, anti-hHER2-HC-K317-DSLEFIASKLA-E318
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKDSLEFIASKLAEYKCKVSNKALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 313, anti-hHER2-HC-K326-DSLEFIASKLA-A327
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKDSLEFIASKLAALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 314, anti-hHER2-HC-A327-DSLEFIASKLA-L328
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKADSLEFIASKLALPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 315, anti-hHER2-HC-L328-DSLEFIASKLA-P329
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALDSLEFIASKLAPAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 316, anti-hHER2-HC-P329-DSLEFIASKLA-A330
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPDSLEFIASKLAAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 317, anti-hHER2-HC-A330-DSLEFIASKLA-P331
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPADSLEFIASKLAPIEKTISKAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 318, anti-hHER2-HC-A339-DSLEFIASKLA-K340
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKADSLEFIASKLAKGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 319, anti-hHER2-HC-K340-DSLEFIASKLA-G341
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKDSLEFIASKLAGQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 320, anti-hHER2-HC-G341-DSLEFIASKLA-Q342
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGDSLEFIASKLAQ
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 321, anti-hHER2-HC-Q342-DSLEFIASKLA-P343
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQDSLEFIASKLA
PREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 322, anti-hHER2-HC-P343-DSLEFIASKLA-R344
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPDSLEFIASKL
AREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 323, anti-hHER2-HC-R344-DSLEFIASKLA-E345
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPRDSLEFIAS
KLAEPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLD
SDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 324, anti-hHER2-HC-R355-DSLEFIASKLA-E356
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSRDSLEFIASKLAEEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 325, anti-hHER2-HC-E356-DSLEFIASKLA-E357
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREDSLEFIASKLAEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 326, anti-hHER2-HC-E357-DSLEFIASKLA-M358
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEDSLEFIASKLAMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 327, anti-hHER2-HC-M358-DSLEFIASKLA-T359
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMDSLEFIASKLATKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVM HEALHNHYTQKSLSLSPG
SEQ ID NO: 328, anti-hHER2-HC-K360-DSLEFIASKLA-N361
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKDSLEFIASKLANQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 329, anti-hHER2-HC-N384-DSLEFIASKLA-G385
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNDSLEFIASKLAGQPENNYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 330, anti-hHER2-HC-N389-DSLEFIASKLA-N390
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENDSLEFIASKLANYKTTPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 331, anti-hHER2-HC-T394-DSLEFIASKLA-P395
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTDSLEFIASKLAPPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 332, anti-hHER2-HC-P395-DSLEFIASKLA-P396
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPDSLEFIASKLAPVLDS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 333, anti-hHER2-HC-D399-DSLEFIASKLA-S400
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDDSLEFIASKLAS
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 334, anti-hHER2-HC-S400-DSLEFIASKLA-D401
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDSLEFIASKLA
DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 335, anti-hHER2-HC-D401-DSLEFIASKLA-G402
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDDSLEFIASKL
AGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 336, anti-hHER2-HC-5415-DSLEFIASKLA-R416
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSDSLEFIASKLARWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 337, anti-hHER2-HC-R416-DSLEFIASKLA-W417
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRDSLEFIASKLAWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 338, anti-hHER2-HC-W417-DSLEFIASKLA-Q418
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWDSLEFIASKLAQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 339, anti-hHER2-HC-Q418-DSLEFIASKLA-Q419
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQDSLEFIASKLAQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 340, anti-hHER2-HC-Q419-DSLEFIASKLA-G420
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQDSLEFIASKLAGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 341, anti-hHER2-HC-G420-DSLEFIASKLA-N421
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGDSLEFIASKLANVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 342, anti-hHER2-HC-N421-DSLEFIASKLA-V422
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNDSLEFIASKLAVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 343, anti-hHER2-HC-H433-DSLEFIASKLA-N434
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHDSLEFIASKLANHYTQKSLSLSPG
SEQ ID NO: 344, anti-hHER2-HC-N434-DSLEFIASKLA-H435
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNDSLEFIASKLAHYTQKSLSLSPG
SEQ ID NO: 345, anti-hHER2-HC-5442-DSLEFIASKLA-L443
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSDSLEFIASKLALSPG
SEQ ID NO: 346, anti-hHER2-HC-L443-DSLEFIASKLA-5444
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLDSLEFIASKLASPG
SEQ ID NO: 347, anti-hHER2-HC-S444-DSLEFIASKLA-P445
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSDSLEFIASKLAPG
SEQ ID NO: 348, anti-hHER2-HC-P445-DSLEFIASKLA-G446
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPDSLEFIASKLAG
SEQ ID NO: 349, anti-hHER2-HC-G446-DSLEFIASKLA-K447
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGDSLEFIASKLA
PPTases:
SEQ ID NO: 350, Sfp enzyme (with TEV protease cleavage
site):
MKIYGIYMDRPLSQEENERFMSFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQY
QLDKSDIRFSTQEYGKPCIPDLPDAHFNISHSGRWVICAFDSQPIGIDIEKTKPISLEIAKR
FFSKTEYSDLLAKDKDEQTDYFYHLWSMKESFIKQEGKGLSLPLDSFSVRLHQDGQVSI
ELPDSHSPCYIKTYEVDPGYKMAVCAAHPDFPEDITMVSYEELLENLYFQGHHHHHH
SEQ ID NO: 351, Sfp enzyme (without TEV protease cleavage
site):
MKIYGIYMDRPLSQEENERFMSFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQY
QLDKSDIRFSTQEYGKPCIPDLPDAHFNISHSGRWVICAFDSQPIGIDIEKTKPISLEIAKR
FFSKTEYSDLLAKDKDEQTDYFYHLWSMKESFIKQEGKGLSLPLDSFSVRLHQDGQVSI
ELPDSHSPCYIKTYEVDPGYKMAVCAAHPDFPEDITMVSYEELLHHHHHH
SEQ ID NO: 352, Sfp mutant R4-4 (with TEV protease cleavage
site):
MKIYGIYMDRPLSQEENERFMSFISPEEREKCRRFYHKEDAHRELLGDVLVRSVISRQY
QLDKSDIRFSTQEYGKPYIPDLPDAHFNISHSGRWVICAFDSQPIGIDIEKTKPISLEIAKR
FFSKTEYSDLLAKDKDEQTDYFYHLWSMKESFIKQEGKGLSLPLDSFSVRLHQDGQVSI
ELPDSHSPCYIKTYEVDPGYKMAVCAAHPDFPEDITMVSYEELLENLYFQGHHHHHH
SEQ ID NO: 353, AcpS enzyme:
MAILGLGTDIVEIARIEAVIARSGDRLARRVLSDNEWAIWKTHHQPVRFLAKRFAVKEAA
AKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVANMHVTLADERHYA
CATVIIESHHHHHH
SEQ ID NO: 354, Thermotoga maritima PPTase:
GSDKIHHHHHHMIVGVGIDVLEVERVPEKFAERILGESEKRLFLTRKRRREFIAGRFALK
EAFFKALGTGLNGHSFTDVEFLESNGKPVLCVHKDFGFFNYAHVSLSHDRFAVALVVLE
KRKGDIIVEGDESFLRKRFEVLERSVEGWEIETSLPPFTLKKLLESSGCRLVRYGNILIGE
SEQ ID NO: 355, Signal peptide for protein secretion
MKTFILLLWVLLLWVIFLLPGATA
SEQ ID NO: 356, mAb2-HC-E388-GDSLDMLEWSLM-N389:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPEGDSLDMLEWSLMNNYKTTPPV
LDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 357, anti-hHER2-HC-A118-GDSLDMLEWSLM-S119
GDSLDMLEWSLMSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 358, anti-hHER2-HC-S119-GDSLDMLEWSLM-T120
SGDSLDMLEWSLMTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 359, anti-hHER2-HC-T120-GDSLDMLEWSLM-K121
STGDSLDMLEWSLMKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 360, anti-hHER2-HC-S131-GDSLDMLEWSLM-S132
STKGPSVFPLAPSGDSLDMLEWSLMSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 361, anti-hHER2-HC-S132-GDSLDMLEWSLM-K133
STKGPSVFPLAPSSGDSLDMLEWSLMKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 362, anti-hHER2-HC-K133-GDSLDMLEWSLM-S134
STKGPSVFPLAPSSKGDSLDMLEWSLMSTSGGTAALGCLVKDYFPEPVTVSWNSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 363, anti-hHER2-HC-S134-GDSLDMLEWSLM-T135
STKGPSVFPLAPSSKSGDSLDMLEWSLMTSGGTAALGCLVKDYFPEPVTVSWNSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 364, anti-hHER2-HC-T135-GDSLDMLEWSLM-S136
STKGPSVFPLAPSSKSTGDSLDMLEWSLMSGGTAALGCLVKDYFPEPVTVSWNSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 365, anti-hHER2-HC-S136-GDSLDMLEWSLM-G137
STKGPSVFPLAPSSKSTSGDSLDMLEWSLMGGTAALGCLVKDYFPEPVTVSWNSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 366, anti-hHER2-HC-G137-GDSLDMLEWSLM-G138
STKGPSVFPLAPSSKSTSGGDSLDMLEWSLMGTAALGCLVKDYFPEPVTVSWNSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 367, anti-hHER2-HC-G138-GDSLDMLEWSLM-T139
STKGPSVFPLAPSSKSTSGGGDSLDMLEWSLMTAALGCLVKDYFPEPVTVSWNSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 368, anti-hHER2-HC-N159-GDSLDMLEWSLM-S160
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNGDSLDMLEWSLMSGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 369, anti-hHER2-HC-S160-GDSLDMLEWSLM-G161
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGDSLDMLEWSLMGAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 370, anti-hHER2-HC-G161-GDSLDMLEWSLM-A162
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGGDSLDMLEWSLMAL
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 371, anti-hHER2-HC-A162-GDSLDMLEWSLM-L163
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAGDSLDMLEWSLML
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 372, anti-hHER2-HC-L163-GDSLDMLEWSLM-T164
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALGDSLDMLEWSLM
TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 373, anti-hHER2-HC-T164-GDSLDMLEWSLM-S165
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTGDSLDMLEWSL
MSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
KTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV
DGVEVHNAKTKPREEQYNSTYRWSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK
AKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP
PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 374, anti-hHER2-HC-S165-GDSLDMLEWSLM-G166
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGDSLDMLEWSL
MGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 375, anti-hHER2-HC-P189-GDSLDMLEWSLM-S190
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPGDSLDMLEWSLMSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 376, anti-hHER2-HC-S190-GDSLDMLEWSLM-S191
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSGDSLDMLEWSLMSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 377, anti-hHER2-HC-S191-GDSLDMLEWSLM-S192
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSGDSLDMLEWSLMSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 378, anti-hHER2-HC-S192-GDSLDMLEWSLM-L193
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSGDSLDMLEWSLMLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD
GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKA
KGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPP
VLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 379, anti-hHER2-HC-L193-GDSLDMLEWSLMN-G194
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGDSLDMLEWSLMNGTQTYICNVNHKPSNTKVDKKVEPKSCD
KTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV
DGVEVHNAKTKPREEQYNSTYRWSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK
AKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP
PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 380, anti-hHER2-HC-G194-GDSLDMLEWSLMN-T195
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGGDSLDMLEWSLMNTQTYICNVNHKPSNTKVDKKVEPKSCD
KTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVDVSHEDPEVKFNWYV
DGVEVHNAKTKPREEQYNSTYRWSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK
AKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP
PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 381, anti-hHER2-HC-T195-GDSLDMLEWSLMN-Q196
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTGDSLDMLEWSLMNQTYICNVNHKPSNTKVDKKVEPKSCD
KTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV
DGVEVHNAKTKPREEQYNSTYRWSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK
AKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP
PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 382, anti-hHER2-HC-Q196-GDSLDMLEWSLMN-T197
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQGDSLDMLEWSLMNTYICNVNHKPSNTKVDKKVEPKSCD
KTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYV
DGVEVHNAKTKPREEQYNSTYRWSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISK
AKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP
PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG
SEQ ID NO: 383, anti-hHER2-LC-T109-GDSLDMLEWSLM-V110
TGDSLDMLEWSLMVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 384, anti-hHER2-LC-V110-GDSLDMLEWSLM-A111
TVGDSLDMLEWSLMAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 385, anti-hHER2-LC-A111-GDSLDMLEWSLM-A112
TVAGDSLDMLEWSLMAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL
QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EC
SEQ ID NO: 386, anti-hHER2-HC-P445-GDSLDMLEWSLM-G446
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGDSLDMLEWSLMG
SEQ ID NO: 387, anti-hHER2-HC-G446-GDSLDMLEWSLM-K447:
STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQS
SGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELL
GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE
EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLP
PSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKL
TVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGGDSLDMLEWSLM
SEQ ID NO: 388, anti-hHER2-LC-I2-GDSLDMLEWSLM-Q3:
DIGDSLDMLEWSLMQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPK
LLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKV
EIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQES
VTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC

Claims

1. A modified antibody or an antigen binding fragment thereof, which comprises at least one peptide tag that is a substrate of 4′-phosphopantetheinyl transferase, and is located within the structural loop of said antibody or antigen binding fragment thereof.

2. The modified antibody or antigen binding fragment thereof of claim 1, wherein said 4′-phosphopantetheinyl transferase is Sfp, AcpS, T. maritima PPTase, human PPTase or a mutant or homolog form thereof that retains the 4′-phosphopantetheinyl transferase activity.

3. The modified antibody or antigen binding fragment thereof of claim 1, wherein the peptide tag is selected from the group consisting of: GDSLSWLLRLLN, (SEQ ID NO: 1) GDSLSWL, (SEQ ID NO: 2) GDSLSWLVRCLN, (SEQ ID NO: 3) GDSLSWLLRCLN, (SEQ ID NO: 4) GDSLSWLVRLLN, (SEQ ID NO: 5) GDSLSWLLRSLN, (SEQ ID NO: 6) GSQDVLDSLEFIASKLA, (SEQ ID NO: 7) VLDSLEFIASKLA, (SEQ ID NO: 8) DSLEFIASKLA, (SEQ ID NO: 9) GDSLDMLEWSLM, (SEQ ID NO: 10) GDSLDMLEWSL, (SEQ ID NO: 11) GDSLDMLEWS, (SEQ ID NO: 12) GDSLDMLEW, (SEQ ID NO: 13) DSLDMLEW, (SEQ ID NO: 14) GDSLDM, (SEQ ID NO: 15) LDSVRMMALAAR, (SEQ ID NO: 16) LDSLDMLEWSLR, (SEQ ID NO: 17) DSLEFIASKL, (SEQ ID NO: 18) DSLEFIASK, (SEQ ID NO: 19) DVLDSLEFI, (SEQ ID NO: 20) and VLDSLEFIAS. (SEQ ID NO: 21)

4. The modified antibody or antigen binding fragment thereof of claim 1, wherein the peptide tag is located within the structural loop of VH, VL, CH1, CH2, CH3, or CL region of the antibody or antigen binding fragment thereof.

5. The modified antibody or antigen binding fragment thereof of claim 1, wherein said the peptide tag is located within the structural loop of the CH1 region of the antibody or antigen binding fragment thereof.

6. The modified antibody or antigen binding fragment thereof of claim 1, wherein said peptide tag is inserted between any two amino acids that are listed in Table 1.

7. The modified antibody or antigen binding fragment thereof of claim 1, wherein the peptide tag is inserted between amino acid residues 2 and 3 of the VH or VL domain, or between amino acid residue 110 and 111 of the light chain, or between 119 and 120, or between 120 and 121, or between 135 and 136, or between 136 and 137, or between 138 and 139, or between 164 and 165, or between 165 and 166, or between 194 and 195 of the CH1 domain, or between 388 and 389, or between 445 and 446, or between 446 and 447 of the CH3 domain of a parental antibody or antigen binding fragment thereof.

8. The modified antibody or antigen binding fragment thereof of claim 1, wherein the peptide tag is inserted between amino acid residue 110 and 111 of the light chain, or between 119 and 120, or between 120 and 121, or between 135 and 136, or between 136 and 137, or between 138 and 139, or between 165 and 166 of the CH1 domain, or between 388 and 389 of the CH3 domain of a parental antibody or antigen binding fragment thereof.

9. The modified antibody or antigen binding fragment thereof of claim 1, wherein the peptide tag is grafted between amino acid residues 62 to 64 or 62 to 65 of the VH domain, or between amino acid residues 133 and 138 of the CH1 domain, or between 189 and 195 of the CH1 domain, or between 190 and 197 of the CH1 domain.

10. (canceled)

11. (canceled)

12. The modified antibody or antigen binding fragment thereof of claim 1, wherein the enzyme having 4′-phosphopantetheinyl transferase activity is Sfp and the peptide tag is GDSLSWLLRLLN (SEQ ID NO:1), GDSLSWLVRCLN (SEQ ID NO:3), GDSLSWLLRCLN (SEQ ID NO:4), GDSLSWLVRLLN (SEQ ID NO:5), GDSLSWLLRSLN (SEQ ID NO:6), GSQDVLDSLEFIASKLA (SEQ ID NO:7), VLDSLEFIASKLA (SEQ ID NO:8), DSLEFIASKLA (SEQ ID NO:9), GDSLDMLEWSLM (SEQ ID NO:10), GDSLDMLEWSL (SEQ ID NO:11), GDSLDMLEWS (SEQ ID NO:12), GDSLDMLEW (SEQ ID NO:13), DSLDMLEW (SEQ ID NO:14), LDSLDMLEWSLR (SEQ ID NO:17), DSLEFIASKL (SEQ ID NO:18), DSLEFIASK (SEQ ID NO:19), or DSLEFIAS (SEQ ID NO:22).

13. The modified antibody or antigen binding fragment thereof of claim 1, wherein the enzyme having 4′-phosphopantetheinyl transferase activity is Sfp and the peptide tag is GDSLSWLLRLLN (SEQ ID NO:1), GDSLSWL (SEQ ID NO:2), DSLEFIASKLA (SEQ ID NO:9), GDSLDMLEWSLM (SEQ ID NO:10), DSLEFIASKL (SEQ ID NO:18), or DSLEFIASK (SEQ ID NO:19).

14. The modified antibody or antigen binding fragment thereof of claim 1, wherein the antibody or antigen binding fragment thereof is an isotype selected from IgG, IgM, IgE and IgA.

15. The modified antibody or antigen binding fragment thereof of claim 1, wherein the antibody or antigen binding fragment thereof is a subtype of IgG selected from IgG1, IgG2, IgG3 and IgG4.

16. The modified antibody or antigen binding fragment thereof of claim 1, wherein the antibody or antigen binding fragment thereof is a human or humanized antibody or antigen binding fragment thereof.

17. The modified antibody or antigen binding fragment thereof of claim 16, wherein the antibody or antigen binding fragment thereof is an anti-HER2 antibody or anti-HER2 antibody fragment.

18. (canceled)

19. (canceled)

20. (canceled)

21. (canceled)

22. (canceled)

23. (canceled)

24. (canceled)

25. (canceled)

26. (canceled)

27. (canceled)

28. (canceled)

29. (canceled)

30. (canceled)

31. (canceled)

32. (canceled)

33. (canceled)

34. (canceled)

35. (canceled)

36. (canceled)

37. (canceled)

38. (canceled)

39. (canceled)

40. The modified antibody or antigen binding fragment thereof according to claim 1 for use as a medicament.

41. The modified antibody or antigen binding fragment thereof according to claim 1 for use in the treatment of cancer, an inflammatory disease, or an infectious disease.

42. The modified antibody or antigen binding fragment thereof according to claim 1 for use in the treatment of cancer.

43. (canceled)

44. (canceled)

45. A nucleic acid encoding the modified antibody or antigen binding fragment thereof of claim 1.

46. A host cell comprising the nucleic acid of claim 45.

47. (canceled)

48. (canceled)

49. (canceled)

50. (canceled)

51. (canceled)

52. (canceled)

53. (canceled)

54. (canceled)

55. (canceled)

56. (canceled)