Patents Assigned to President & Fellows of Harvard College
  • Patent number: 11981917
    Abstract: Methods of modulating expression of a target nucleic acid in a cell are provided including introducing into the cell a first foreign nucleic acid encoding one or more RNAs complementary to DNA, wherein the DNA includes the target nucleic acid, introducing into the cell a second foreign nucleic acid encoding a nuclease-null Cas9 protein that binds to the DNA and is guided by the one or more RNAs, introducing into the cell a third foreign nucleic acid encoding a transcriptional regulator protein or domain, wherein the one or more RNAs, the nuclease-null Cas9 protein, and the transcriptional regulator protein or domain are expressed, wherein the one or more RNAs, the nuclease-null Cas9 protein and the transcriptional regulator protein or domain co-localize to the DNA and wherein the transcriptional regulator protein or domain regulates expression of the target nucleic acid.
    Type: Grant
    Filed: October 25, 2022
    Date of Patent: May 14, 2024
    Assignee: President and Fellows of Harvard College
    Inventors: George M. Church, Prashant G. Mali, Kevin M. Esvelt
  • Patent number: 11982674
    Abstract: In some embodiments, a mass spectrometry tag may comprise a linker region, a mass balance region, and a reporter region. The mass spectrometry tag may be configured to fragment in a mass spectrometer via an energy dependent process to produce multiple reporter molecules. For example, the reporter region of the tag may be configured to produce at least two reporter molecules via fragmentation. In some embodiments, one or more regions of the tag may comprise at least one heavy isotope. In some such embodiments, the ability to fragment into multiple reporter molecules as well as the placement and/or number of heavy isotope(s) allows the mass spectrometry tag to be distinguished from other similar mass spectrometry tags. In some such embodiments, the ability to distinguish between tags having the same or substantially similar total mass to charge ratio and reporter region mass may allow the system to have a greater multiplexing capacity than conventional systems.
    Type: Grant
    Filed: July 28, 2021
    Date of Patent: May 14, 2024
    Assignees: President and Fellows of Harvard College, Dana-Farber Cancer Institute, Inc.
    Inventors: Craig Braun, Wilhelm Haas, Steven P. Gygi, Gregory H. Bird, Loren D. Walensky, Martin Helmut Wuhr, Brian K. Erickson
  • Patent number: 11985451
    Abstract: A method of generating uniform large-scale optical focus arrays (LOT As) with a phase spatial light modulator (SLM) includes identifying and removing undesired phase rotation in the iterative Fourier transform algorithm (IFTA), thereby producing computer-generated holograms of highly uniform LOT As using a reduced number of iterations as compared to a weighted Gerchberg-Saxton algorithm. The method also enables a faster compensation of optical system-induced LOT A intensity inhomogeneity than the conventional IFTA.
    Type: Grant
    Filed: February 21, 2020
    Date of Patent: May 14, 2024
    Assignees: President and Fellows of Harvard College, Massachusetts Institute of Technology
    Inventors: Donggyu Kim, Alexander Keesling Contreras, Ahmed Omran, Harry Jay Levine, Hannes Bernien, Mikhail D. Lukin, Dirk R. Englund
  • Patent number: 11981956
    Abstract: Provided herein, in some embodiments, are compositions and methods for proximity detection of molecular targets.
    Type: Grant
    Filed: January 25, 2019
    Date of Patent: May 14, 2024
    Assignee: President and Fellows of Harvard College
    Inventors: Sinem K. Saka, Jocelyn Yoshiko Kishi, Peng Yin
  • Patent number: 11981911
    Abstract: Provided herein, in some embodiments, are recombinant viral genomes comprising an inhibitory oligonucleotide that reduces inflammation for use, for example, in gene therapy.
    Type: Grant
    Filed: November 8, 2018
    Date of Patent: May 14, 2024
    Assignee: President and Fellows of Harvard College
    Inventors: Ying Kai Chan, George M. Church
  • Patent number: 11980641
    Abstract: Embodiments of various aspects described herein relate to methods, kits, and cell culture media for generation of podocytes from pluripotent stem (PS) cells, as well as cells produced by the same, and methods of use.
    Type: Grant
    Filed: July 2, 2021
    Date of Patent: May 14, 2024
    Assignee: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Donald E. Ingber, Samira Musah
  • Publication number: 20240148889
    Abstract: Provided herein are antibody drug conjugates of Formula (I): G-R7(I) and pharmaceutically acceptable salts thereof, wherein G is a molecular payload; and R7 is -L-A-B, wherein L is a linking group, A is a conjugating group, and B is an antibody or antibody fragment. Also provided are methods of preparing the antibody-drug conjugates, pharmaceutically acceptable compositions thereof, and methods of their use and treatment. Further provided are precursors to the antibody drug conjugates (e.g., compounds of Formula (III), novel trioxacarcins without an antibody conjugated thereto), pharmaceutical compositions thereof, and methods of their use and treatment.
    Type: Application
    Filed: June 10, 2021
    Publication date: May 9, 2024
    Applicant: President and Fellows of Harvard College
    Inventors: Andrew G. Myers, Ethan L. Magno
  • Patent number: 11977221
    Abstract: An optical device for aberration correction (e.g., chromatic aberration correction) is disclosed. The optical device includes an optical component (e.g., a spherical lens) and a metasurface optically coupled to the optical component. The metasurface includes a plurality of nanostructures that define a phase profile. The phase profile corrects an aberration (e.g., chromatic aberration) caused by the optical component. The resulting optical device becomes diffraction-limited (e.g., for the visible spectrum) with the metasurface.
    Type: Grant
    Filed: February 19, 2019
    Date of Patent: May 7, 2024
    Assignee: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Wei-Ting Chen, Alexander Yutong Zhu, Jared F. G. Sisler, Federico Capasso
  • Patent number: 11976304
    Abstract: Described herein are methods for providing an in vitro intestinal model system, e.g., using primary cells instead of cell lines and/or cancerous cells.
    Type: Grant
    Filed: December 1, 2021
    Date of Patent: May 7, 2024
    Assignee: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Donald E. Ingber, Magdalena Kasendra, Alexandra Sontheimer-Phelps, Alessio Tovaglieri
  • Patent number: 11976318
    Abstract: Methods of analyzing nucleic acids of a cell are provided.
    Type: Grant
    Filed: December 13, 2022
    Date of Patent: May 7, 2024
    Assignee: President and Fellows of Harvard College
    Inventors: George M. Church, Jehyuk Lee, Daniel Levner, Michael Super
  • Publication number: 20240141387
    Abstract: Provided herein, in some embodiments, are engineered nucleic acid targeting vectors that include a sequence of interest flanked by homology arms, each homology arm comprising a sequence homologous to a sequence in a safe harbor site in the human genome in any one of the following loci: 1q31, 3p24, 7q35, and Xq21. Also provided herein are methods of using and compositions the comprising engineered nucleic acid targeting vectors.
    Type: Application
    Filed: March 1, 2022
    Publication date: May 2, 2024
    Applicants: President and Fellows of Harvard College, ETH Zurich
    Inventors: Denitsa M. Milanova, Erik Aznauryan, George M. Church, Sai Reddy
  • Publication number: 20240140836
    Abstract: Microfluidic devices for sterilizing fluids using pulsed electric fields are disclosed. In some embodiments, a device may include first and second electrode layers and a spacer layer positioned between the electrode layers. The spacer layer may define one or more fluid channels extending between the electrode layers. A power supply may be coupled to the electrode layers and configured to supply voltage pulses to the electrode layers to generate electric field pulses within the fluid channels. In some embodiments, the electrode layers may be textured such that the electric fields generated in the fluid channels are non-uniform.
    Type: Application
    Filed: September 30, 2020
    Publication date: May 2, 2024
    Applicant: President and Fellows of Harvard College
    Inventors: Elizabeth Calamari, Richard Novak, Manuel Ramses Martinez Flores, Alexandre L.M. Dinis, Robert Cunningham, Olivier Henry, Donald E. Ingber, Jeremy J. Papadopoulos
  • Publication number: 20240142686
    Abstract: The present disclosure provides an optical component, which may be a metasurface grating, including (a) a substrate; and (b) an array of subwavelength-spaced phase-shifting elements, which are tessellated on the substrate to produce, when illuminated with a polarized incident light, a diffracted light beam with a distinct polarization state for each of a finite number of diffraction orders, wherein the finite number is 2 or more.
    Type: Application
    Filed: December 4, 2023
    Publication date: May 2, 2024
    Applicant: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Noah A. RUBIN, Federico CAPASSO
  • Publication number: 20240144704
    Abstract: The present disclosure provides methods for identifying cells in an image. An apparatus for identifying cells in an image is also provided by the present disclosure. Further provided herein is a non-transitory computer-readable storage medium for performing the methods disclosed herein. Methods of diagnosing a disease or disorder and of treating a disease or disorder in a subject using the methods disclosed are also provided herein.
    Type: Application
    Filed: February 18, 2022
    Publication date: May 2, 2024
    Applicants: c/o The Broad Institute, Inc., Massachusetts Institute of Technology, President and Fellows of Harvard College
    Inventors: Xiao Wang, Jia Liu, Yichun He
  • Patent number: 11969935
    Abstract: In one aspect, the present disclosure provides a nozzle for a 3D printing system. The nozzle may include a flowpath with a material inlet and a material outlet. The nozzle may further include a valve in fluid communication with the flowpath between the material inlet and the material outlet, where the valve includes a closed state and an open state, where in the closed state the valve obstructs the flowpath between the material inlet and the material outlet, and where in the open state the material inlet is in fluid communication with the material outlet. The nozzle may further include a compensator in fluid communication with the flowpath, where the compensator includes a contracted state associated with the open state of the valve and an expanded state associated with the closed state of the valve.
    Type: Grant
    Filed: December 5, 2017
    Date of Patent: April 30, 2024
    Assignee: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Jennifer A. Lewis, Mark A. Skylar-Scott, Jochen Mueller
  • Patent number: 11971411
    Abstract: The present invention provides methods for screening and diagnosing prostate cancer based on a correlation between cancer cell growth, cancer lethality or recurrence and the expression level of ZFP36 or NEDD9 and PTEN in conjunction with ZFP36. The disclosure also provides methods for screening and diagnosing prostate cancer based on a correlation between cancer lethality and the genotype of rs1910301 SNP. Also provided are methods for treating prostate cancer comprising providing a treatment or monitoring based on the expression level of ZFP36, the expression level of NEDD9, and the expression level of ZFP36 in conjunction with PTEN levels or the genotype of rs1910301 SNP.
    Type: Grant
    Filed: January 20, 2017
    Date of Patent: April 30, 2024
    Assignees: DANA-FARBER CANCER INSTITUTE, INC., PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Curtis Huttenhower, Travis Gerke, Christopher Sweeney, Lorelei Mucci, Gwo-Sho Mary Lee, Daniela Bornigen, Xiaodong Wang, Svitlana Tyekucheva, Kristina Jordahl
  • Patent number: 11971357
    Abstract: A method for measuring a composition of a biological sample is disclosed. A stimulated Raman scattering (SRS) image of the biological sample is received. The effect of light scattering in the received SRS image is computationally removed. An absolute concentration of total protein, total lipid, and/or water from the biological sample is determined.
    Type: Grant
    Filed: May 7, 2020
    Date of Patent: April 30, 2024
    Assignee: PRESIDENT AND FELLOWS OF HARVARD COLLEGE
    Inventors: Seungeun Oh, Marc Kirschner
  • Patent number: 11973306
    Abstract: Disclosed is a laser system including a first laser and a second laser. The first laser includes a laser cavity, and a gas phase molecular gain medium disposed in the laser cavity, the gain medium having an absorption band. The second laser is a solid state laser configured to be continuously tunable, with respect to an emission wavelength of the second laser, over the absorption band of the gain medium, and the second laser is tuned to pump rotational vibrational transitions in the gain medium to achieve a rotational population inversion.
    Type: Grant
    Filed: November 12, 2020
    Date of Patent: April 30, 2024
    Assignees: PRESIDENT AND FELLOWS OF HARVARD COLLEGE, Massachusetts Institute of Technology, The United States of America as Represented by the Secretary of the Army
    Inventors: Paul Chevalier, Arman Amirzhan, Marco Piccardo, Fan Wang, Steven Glen Johnson, Henry O. Everitt, Federico Capasso
  • Publication number: 20240130784
    Abstract: A compact laser-steering end effector includes a frame, at least two active mirrors, and a pair of actuators. The frame has a greatest dimension in a plane orthogonal to a longitudinal axis of no more than 13 mm, and the mirrors are mounted proximate to the distal end of the frame. The actuators are mounted to the frame and configured to respectively change the tilt of the active mirrors relative to the frame. A pathway is provided through the frame to deliver a laser beam to the mirrors, and wherein the mirrors are positioned and configurable via the actuators to reflect the laser beam off of each mirror en route to an external target.
    Type: Application
    Filed: October 27, 2020
    Publication date: April 25, 2024
    Applicant: President and Fellows of Harvard College
    Inventors: Peter A. York, Simon A. Bothner, Robert J. Wood
  • Publication number: 20240131828
    Abstract: Articles and devices comprising fluorinated polymers, as well as methods of preparing fluorinated polymers, are generally described. In some cases, such fluorinated elastomers can be used for sensing neural activity, e.g., by encapsulating electronic circuits, or other applications. Furthermore, according to certain embodiments, polymers can, surprisingly, be directly deposited onto layers comprising low molecular weight fluorinated polymers, e.g., without swelling in the presence of certain solvents. Some embodiments are generally directed to devices and methods for treating fluorinated polymers and subsequently depositing material onto the treated fluorinated polymers. This may allow the fabrication and patterning of multilayered articles comprising fluorinated elastomers.
    Type: Application
    Filed: March 9, 2022
    Publication date: April 25, 2024
    Applicant: President and Fellows of Harvard College
    Inventors: Jia Liu, Paul Claude Henri Le Floch, Hao Sheng