Patents Examined by Anne Gussow
  • Patent number: 8716467
    Abstract: Disclosed are devices and methods to synthesize polynucleotides and libraries of polynucleotides such as libraries of oligonucleotides. In exemplary embodiments, the device includes a support having a plurality of features. Each feature contains a plurality of oligonucleotides. Within each feature, each of the plurality of oligonucleotides includes an identical predetermined subunit sequence of X nucleosides and a degenerate sequence of Y nucleosides. A predetermined combination of a subset of the features can be used to produce a polynucleotide having a predetermined sequence of Z nucleosides.
    Type: Grant
    Filed: March 2, 2011
    Date of Patent: May 6, 2014
    Assignee: Gen9, Inc.
    Inventor: Joseph Jacobson
  • Patent number: 8709798
    Abstract: The present invention relates to a nucleic acid containing at least one homing endonuclease site (HE) and at least one restriction enzyme site (X) wherein the HE and X sites are selected such that HE and X result in compatible cohesive ends when cut by the homing endonuclease and restriction enzyme, respectively, and the ligation product of HE and X cohesive ends can neither be cleaved by the homing endonuclease nor by the restriction enzyme. Further subject-matter of the present invention relates to a vector comprising the nucleic acid of the present invention, host cells containing the nucleic acid and/or the vector, a kit for cloning and/or expression of multiprotein complexes making use of the vector and the host cells, a method for producing a vector containing multiple expression cassettes, and a method for producing multiprotein complexes.
    Type: Grant
    Filed: March 8, 2010
    Date of Patent: April 29, 2014
    Assignee: Europaisches Laboratorium fur Molekularbiologie
    Inventor: Imre Berger
  • Patent number: 8710205
    Abstract: The present invention relates to a transcription factor found in filamentous fungi, especially in Aspergillii, DNA sequences coding for said factor, its transformation into and expression in fungal host organisms, and the use of said factor in such hosts for increasing the expression of a polypeptide of interest being produced by said host.
    Type: Grant
    Filed: February 20, 2003
    Date of Patent: April 29, 2014
    Assignee: Novozymes A/S
    Inventor: Tove Christensen
  • Patent number: 8709802
    Abstract: A method is provided, including obtaining a population of antigen-presenting cells, enriching a population of stem/progenitor cells within a larger population of cells, activating the population of antigen-presenting cells and, following the activating, inducing at least one process selected from the group consisting of: differentiation, expansion, activation, secretion of a molecule, and expression of a marker, by exposing the enriched stem/progenitor cell population to the population of antigen-presenting cells. Other applications are also described.
    Type: Grant
    Filed: January 11, 2011
    Date of Patent: April 29, 2014
    Assignee: Biogencell, Ltd
    Inventor: Yael Porat
  • Patent number: 8697358
    Abstract: The present invention relates on a non-invasive method for diagnosing prostate cancer and/or assessing the risk of a subject acquiring prostate cancer comprising the analysis of the expression of the marker gene hepsin in an urine sample. It further relates on a non-invasive method for diagnosing prostate cancer and/or assessing the risk of a subject acquiring prostate cancer by determining the expression levels of the marker genes hepsin, EZH2, prostein and PCA3.
    Type: Grant
    Filed: December 15, 2010
    Date of Patent: April 15, 2014
    Assignee: Technische Universitaet Dresden
    Inventors: Manfred Wirth, Susanne Fuessel, Rainer Koch
  • Patent number: 8697359
    Abstract: The invention provides for systems, methods, and compositions for altering expression of target gene sequences and related gene products. Provided are vectors and vector systems, some of which encode one or more components of a CRISPR complex, as well as methods for the design and use of such vectors. Also provided are methods of directing CRISPR complex formation in eukaryotic cells and methods for utilizing the CRISPR-Cas system.
    Type: Grant
    Filed: October 15, 2013
    Date of Patent: April 15, 2014
    Assignees: The Broad Institute, Inc., Massachusetts Institute of Technology
    Inventor: Feng Zhang
  • Patent number: 8697442
    Abstract: The invention relates to a method for isolating cells from a tissue sample. In preferred embodiments, chondrocytes are isolated from cartilage tissue in a shorter time than hitherto considered possible.
    Type: Grant
    Filed: August 31, 2007
    Date of Patent: April 15, 2014
    Assignee: Cellcotec B.V.
    Inventors: Jeanine Anna Alphonse Hendriks, Adetola Bamidele Adesida
  • Patent number: 8697438
    Abstract: Provided is a cell cultivation method in which the cell is cultured using a peptide hydrogel as a scaffold, for carrying out high-dimensional culture of a cell such as porcine hepatocyte, human hepatocyte, porcine pancreatic islet or human pancreatic islet for a long period under conditions where cell survival, cell morphology and cell functions are maintained. Also provided are a cell culture including a cell and a peptide hydrogel obtained by the above-described cultivation method, a bioreactor including the cell culture, and a cell preparation including the cell culture.
    Type: Grant
    Filed: December 23, 2011
    Date of Patent: April 15, 2014
    Assignees: National University Corporation Okayama University, 3-D Matrix, Ltd.
    Inventors: Naoya Kobayashi, Noriaki Tanaka
  • Patent number: 8679836
    Abstract: This disclosure relates to fluorescent cell lines and to the use of such cell lines in monitoring cellular activity, such as angiogenesis. This disclosure further relates to the use of such cell lines in a three-dimensional cell culture to monitor angiogenic and metastatic potential of tumor cells and selecting personalized therapeutics for treatment of cancer.
    Type: Grant
    Filed: June 10, 2010
    Date of Patent: March 25, 2014
    Assignee: The United States of America, as represented by the Secretary, Department of Health and Human Services
    Inventors: Enrique Zudaire, Frank Cuttitta, Changge Fang
  • Patent number: 8669054
    Abstract: In embodiments the expression or methylation of the PAX5 gene is used as a marker for the diagnosis and prognosis of gastric cancer. In further embodiments methods for detecting gastric cancer are disclosed as are methods for inhibiting the growth of gastric cancer.
    Type: Grant
    Filed: April 30, 2010
    Date of Patent: March 11, 2014
    Assignee: The Chinese University of Hong Kong
    Inventors: Jun Yu, Joseph Jao Yiu Sung, Xiaoxing Li
  • Patent number: 8663981
    Abstract: A modified CAG promoter which is capable of driving high levels of expression of sequences of interest inserted downstream therefrom is herein described.
    Type: Grant
    Filed: August 7, 2009
    Date of Patent: March 4, 2014
    Assignee: Her Majesty The Queen in Right of Canada as represented by the Minister of Health
    Inventors: Gary Kobinger, Heinz Feldmann, Kaylie Tran
  • Patent number: 8663970
    Abstract: The invention provides a yeast strain and a method for making the same. The method has the step of replacing the regulation region upstream of the hsp104 gene in the genome of the yeast, so as to accelerate and prolong the expression span of hsp104 gene and enhance the capability of the yeast to ferment and produce ethanol in a high-temperature environment. The yeast is capable of fermenting glucose at a temperature higher than 42° C. to produce ethanol, or biomass ethanol, wherein the ethanol production ratio based on fermentation of glucose is higher than 97%. Being able to synchronize the degradation/hydrolysis stage and fermentation stage of biomass ethanol producing process, the yeast in accordance with the present invention is able to lower the production cost of biomass ethanol and further raise the productivity with its high ethanol production ratio.
    Type: Grant
    Filed: September 11, 2012
    Date of Patent: March 4, 2014
    Assignee: National Chung Cheng University
    Inventors: Kuang-Tse Huang, Hau-Ren Chen, Wen-Chien Lee, Chang-Yu Wu, Hsin-Cheng Chen, Yu-Long Wu, Meng-Tsu Tsai, Ju-Ping Yeh, Yu-Wei Liang, Yu-Shiuan Lai
  • Patent number: 8663918
    Abstract: A method for preparing a sample by utilizing a shearing force in the presence of a size stabilizer to break apart the sample to obtain nucleic acid molecules in a usable size range. Once nucleic acid molecules are obtained, magnetic entanglement particles are used to concentrate and clean the nucleic acid molecules for further testing.
    Type: Grant
    Filed: May 24, 2010
    Date of Patent: March 4, 2014
    Assignee: Integrated Nano-Technologies, Inc.
    Inventors: Dennis M. Connolly, Charles DeBoer, Vera Tannous, Christopher Kilcoin, Konstantin Aptekarev, David B. Bailey, Richard S. Murante
  • Patent number: 8652778
    Abstract: The invention provides methods to detect molecular recognition events. The invention also provides methods to detect the presence of or identify a target species based on its interaction with one or more probe species. The methods of the invention are based on amplification of the signal due to each molecular recognition event. The amplification is achieved through photopolymerization, with the polymer formed being associated with the molecular recognition event. In one aspect, a fluorescent polymer, a magnetic polymer, a radioactive polymer or an electrically conducting polymer can form the basis of detection and amplification. In another aspect, a polymer gel swollen with a fluorescent solution, a magnetic solution, a radioactive solution or an electrically conducting solution can form the basis of detection and amplification. In another aspect, detectable particles can be included in the polymer formed. In another aspect, sufficient polymer forms to be detectable by visual inspection.
    Type: Grant
    Filed: April 8, 2011
    Date of Patent: February 18, 2014
    Assignee: The Regents of the University of Colorado, A Body Corporate
    Inventors: Christopher N. Bowman, Kathy Rowlen, Hadley Sikes, Ryan Hansen, Heather Jean Avens
  • Patent number: 8647867
    Abstract: Provided is a cell cultivation method in which the cell is cultured using a peptide hydrogel as a scaffold, for carrying out high-dimensional culture of a cell such as porcine hepatocyte, human hepatocyte, porcine pancreatic islet or human pancreatic islet for a long period under conditions where cell survival, cell morphology and cell functions are maintained. Also provided are a cell culture including a cell and a peptide hydrogel obtained by the above-described cultivation method, a bioreactor including the cell culture, and a cell preparation including the cell culture.
    Type: Grant
    Filed: September 29, 2006
    Date of Patent: February 11, 2014
    Assignees: National University Corportion Okayama University, 3-D Matrix, Ltd.
    Inventors: Naoya Kobayashi, Noriaki Tanaka
  • Patent number: 8628954
    Abstract: The subject matters of invention relate to expression cassette, use of the expression cassette, vector, host cell, a method for producing a polypeptide ensuring its stable expression by the prokaryotic host as well as an use of the expression cassette. The invention enables stable expression of the target polypeptide, in systems where DNA-dependent RNA polymerase recognizes promoter regulating synthesis of target protein as well as selection marker, which is required for survival of the host.
    Type: Grant
    Filed: June 8, 2007
    Date of Patent: January 14, 2014
    Assignee: Instytut Biotechnologii I Antybiotykow
    Inventors: Andrzej Plucienniczak, Malgorzata Kesik, Grazyna Plucienniczak, Diana Mikiewicz-Sygula
  • Patent number: 8626452
    Abstract: Methods to determine drug hydrophobicity and to quantify changes in drug hydrophobicity that optimize drug function by means of differential scanning calorimetry of an endothermic phase transition of a base protein-based polymer, specifically of an elastic-contractile model protein, to which is attached the drug to be evaluated for its hydrophobicity in terms of the change in Gibbs free energy for hydrophobic association, ?GHA have been developed. Also described herein is the preparation of nanoparticles comprised of protein-based polymers, specifically of elastic-contractile model proteins, designed for the binding and desired release rate of a specific drug or class of drugs. Further described herein is a means of targeting the drug-laden nanoparticle to a cell by means of decorating the nanoparticle surface with a molecular entity that selectively binds to the diseased cell or disease causing organism, e.g.
    Type: Grant
    Filed: June 9, 2010
    Date of Patent: January 7, 2014
    Inventors: Dan W. Urry, Kelley D. Urry
  • Patent number: 8624018
    Abstract: A probe for detecting polymorphism in the ABCC2 gene is constituted by including, for example, an oligonucleotide which is complementary to a base sequence including the 207th to the 217th bases of the base sequence indicated in SEQ ID NO:1 and having a length of from 11 bases to 60 bases, and has an identity of at least 80%, and in which a base corresponding to the 217th base has been labeled with a fluorescent dye.
    Type: Grant
    Filed: April 27, 2012
    Date of Patent: January 7, 2014
    Assignee: ARKRAY, Inc.
    Inventor: Aki Iguchi
  • Patent number: 8624017
    Abstract: A probe for detecting polymorphism in the ABCG2 gene is constituted by including, for example, an oligonucleotide which is complementary to a base sequence including the 301st to the 311th bases of the base sequence indicated in SEQ ID NO:1 and having a length of from 11 bases to 50 bases, and has an identity of at least 80%, and in which a base corresponding to the 311th base has been labeled with a fluorescent dye.
    Type: Grant
    Filed: April 27, 2012
    Date of Patent: January 7, 2014
    Assignee: ARKRAY, Inc.
    Inventors: Aki Iguchi, Kaoru Kurose
  • Patent number: 8617809
    Abstract: As described in more detail below, the present invention generally features compositions and non-invasive methods useful for the screening, identification, monitoring, or diagnosis of subjects having a neoplasia. The invention further provides highly accurate non-invasive methods for the staging or selection of treatment for a bladder, renal, or prostate cancer in a subject.
    Type: Grant
    Filed: February 14, 2006
    Date of Patent: December 31, 2013
    Assignee: The Johns Hopkins University
    Inventor: David Sidransky