Patents Assigned to Arryx, Inc.
  • Patent number: 7699767
    Abstract: The invention provides a method, apparatus and system for separating blood and other types of cellular components, and can be combined with holographic optical trapping manipulation or other forms of optical tweezing. One of the exemplary methods includes providing a first flow having a plurality of blood components; providing a second flow; contacting the first flow with the second flow to provide a first separation region; and differentially sedimenting a first blood cellular component of the plurality of blood components into the second flow while concurrently maintaining a second blood cellular component of the plurality of blood components in the first flow. The second flow having the first blood cellular component is then differentially removed from the first flow having the second blood cellular component. Holographic optical traps may also be utilized in conjunction with the various flows to move selected components from one flow to another, as part of or in addition to a separation stage.
    Type: Grant
    Filed: June 13, 2008
    Date of Patent: April 20, 2010
    Assignee: Arryx, Inc.
    Inventors: Daniel Mueth, Joseph Plewa, Jessica Shireman, Amy Anderson, Lewis Gruber, Neil Harris Rosenbaum
  • Publication number: 20090226880
    Abstract: The present invention provides novel methods of cell staining, such as bovine sperm, using electroporation or osmolality treatments at viability-enhancing temperatures. Furthermore, methods of highly efficient cell sorting that are especially suitable in sorting bovine sperm using novel cell staining procedures are also provided.
    Type: Application
    Filed: February 11, 2009
    Publication date: September 10, 2009
    Applicant: Arryx, Inc.
    Inventors: Amy L. Anderson, Christopher R. Knutson, Daniel Mueth, Joseph Plewa, Evan Tanner
  • Patent number: 7574076
    Abstract: The present invention is related to an apparatus for the sorting of particles in a fluid medium flowing within a liquid-core waveguide, by combining customized light intensity patterns formed inside the waveguide, and diluting the suspension of particles (i.e., cells, blood, nanoparticles, etc.) flowing within the fluid medium of the waveguide. With this customized light intensity pattern, which controls the optical forces introduced by the light confined within the waveguide, and the control of the hydrodynamic forces introduced by the liquid flow (or multiple channel liquid flows), the sorting of particles can be achieved.
    Type: Grant
    Filed: April 7, 2006
    Date of Patent: August 11, 2009
    Assignee: Arryx, Inc.
    Inventors: Daniel Mueth, Evan Tanner, Joseph Plewa, Osman Akcakir
  • Patent number: 7545491
    Abstract: Apparatus for sorting and orienting sperm cells has a pair or walls in confronting relationship forming a flow chamber having inlet, a downstream outlet, and intermediate detector region. The inlet receives first and second spaced apart streams of input fluid and a third stream of sample fluid containing the cells to be sorted. The first and second streams have respective flow rates relative to third stream, such that the third stream is constricted forming a relatively narrow sample stream, so that the cells are oriented parallel to the walls. A detector detects desired cells and a sorter downstream of the detector for sorting the desired cells from the stream.
    Type: Grant
    Filed: February 14, 2008
    Date of Patent: June 9, 2009
    Assignee: Arryx, Inc.
    Inventors: Daniel Mueth, Amy Anderson, Christopher Knutson, Joseph Plewa
  • Publication number: 20090128825
    Abstract: The present invention utilizes a holographic optical forcing array for dynamic cellular probing and diagnostics. A holographic optical trapping system generates optical forces on objects so that deformations thereof may be quantified. In one embodiment, digital holography is used to generate an interference pattern, and an analysis thereof determines the phase profile which yields a measurement of the objects' shape deformation using only one image. In another embodiment, phase-stepped holography allows the phase profile of an object to be measured using only one image, by using a holographic optical element to make phase-shifted replicas of the beam in space. In another embodiment, the optical forcing array applies optical forces to beads placed on the objects' surface, deforming the objects. The beads' position is determined by applying Mie theory, and analysis thereof yields the three dimensional position of the beads, and a measurement of the deformation displacement on the objects' surface.
    Type: Application
    Filed: October 30, 2008
    Publication date: May 21, 2009
    Applicant: ARRYX, INC.
    Inventor: Osman Akcakir
  • Publication number: 20090108190
    Abstract: A method for manipulating particles (micro, nano, and pico) having one or more characteristics with an optical trap formed by modulating a laser beam with a Diffractive Optical Element (DOE). At least one characteristic of the material is selected; and a laser beam having a selected wavelength corresponding to the at least one selected characteristic of the material is generated. Values of the DOE are calculated corresponding to the at least one selected characteristic of the material. The beam and the DOE are modulated to produce a holographic optical trap having properties corresponding to the at least one selected characteristic; the trap is focused to a beam focus or selected spot size; and the beam focus is located near a particle location for trapping the particle therein.
    Type: Application
    Filed: August 27, 2008
    Publication date: April 30, 2009
    Applicant: ARRYX, INC.
    Inventors: Joseph Plewa, Evan Tanner, Dan Mueth, Lewis Gruber, Kenneth Bradley
  • Publication number: 20090075826
    Abstract: The present invention relates to an apparatus and method of sorting objects and identifying the objects in a forensics sample, including using holographic optical trapping to sort objects from contaminants, and performing (single cell) PCR-based STR analysis on the objects to determine their identification. In addition, the chip used as a support for sorting the objects can also be used for performing single cell PCR-based STR analysis. In another embodiment, a microfluidics chip is used to stream the sample and sort the objects, before single cell PCR-based STR analysis is performed. The chip used for sorting utilizing HOT in the absence or presence of microfluidic streaming and sorting can also be the same as that used for the single cell PCR-based STR analysis.
    Type: Application
    Filed: September 11, 2008
    Publication date: March 19, 2009
    Applicant: ARRYX, INC.
    Inventor: Tania Chakrabarty
  • Publication number: 20090068671
    Abstract: The present invention relates to a method and apparatus of sorting objects including, providing a sample having wanted objects and unwanted objects; coating a surface of a sample holder with an antibody; placing an eluted sample on the sample holder; binding an antigen in the wanted objects with the antibody on the surface of the sample holder to sort the objects into wanted objects and unwanted objects; separating the wanted objects; and performing PCR-based STR analysis on the wanted objects. In one embodiment, holographic optical trapping is used to further sort the wanted objects. In other embodiments, the wanted objects are sperm and the antibody is a human sperm specific antibody, and the PCR is single cell PCR-based STR analysis. In still other embodiments, the binding is direct or indirect, ligands are used to bind to object-specific organomolecules, and protein A or protein G are used to bind the antibody.
    Type: Application
    Filed: September 11, 2008
    Publication date: March 12, 2009
    Applicant: ARRYX, INC.,
    Inventor: Tania Chakrabarty
  • Publication number: 20090032449
    Abstract: The invention provides a method, apparatus and system for separating blood and other types of cellular components, and can be combined with holographic optical trapping manipulation or other forms of optical tweezing. One of the exemplary methods includes providing a first flow having a plurality of blood components; providing a second flow; contacting the first flow with the second flow to provide a first separation region; and differentially sedimenting a first blood cellular component of the plurality of blood components into the second flow while concurrently maintaining a second blood cellular component of the plurality of blood components in the first flow. The second flow having the first blood cellular component is then differentially removed from the first flow having the second blood cellular component. Holographic optical traps may also be utilized in conjunction with the various flows to move selected components from one flow to another, as part of or in addition to a separation stage.
    Type: Application
    Filed: June 13, 2008
    Publication date: February 5, 2009
    Applicant: ARRYX, INC.
    Inventors: Daniel Mueth, Joseph Plewa, Jessica Shireman, Amy Anderson, Lewis Gruber, Neil Harris Rosenbaum
  • Patent number: 7482577
    Abstract: The present invention employs a beam steering apparatus to isolate valuable cells from other cells, tissues, and contaminants. In one embodiment, the system balances optical trapping against biasing flow to parallelize cell sorting under the flexible control of computer program-directed traps which differentially manipulate cells based on their composition or labels to direct separation.
    Type: Grant
    Filed: June 12, 2007
    Date of Patent: January 27, 2009
    Assignee: Arryx, Inc.
    Inventors: Lewis Gruber, Kenneth Bradley, Ward Lopes, Robert Lancelot, Joseph Plewa, David Grier
  • Publication number: 20090002790
    Abstract: An apparatus for manipulating particles (micro, nano, and pico) having one or more characteristics with an optical trap formed by modulating a laser beam with a Diffractive Optical Element (DOE). At least one characteristic of the material is selected; and a laser beam having a selected wavelength corresponding to the at least one selected characteristic of the material is generated. Values of the DOE are calculated corresponding to the at least one selected characteristic of the material. The beam and the DOE are modulated to produce a holographic optical trap having properties corresponding to the at least one selected characteristic; the trap is focused to a beam focus or selected spot size; and the beam focus is located near a particle location for trapping the particle therein.
    Type: Application
    Filed: August 28, 2008
    Publication date: January 1, 2009
    Applicant: ARRYX, INC.
    Inventors: Joseph Plewa, Evan Tanner, Dan Mueth, Lewis Gruber, Kenneth Bradley
  • Patent number: 7466883
    Abstract: Our invention relates generally to an optical switch (31) and an optical router (10) to rapidly route signals from particular channels (22, 24) within an optical band by using optical switches (20) which utilize a controlled whispering gallery mode (WGM) resonance of dielectric microspheres (S1, S2, S3) to optically switch signals. Another invention relates to optical filters which use a WGM resonate structure (150) to isolate and switch specific optical signals between waveguides (F1, F2). In other inventions, the filter (100) is switched “on/off” by signal loss within a WGM resonate structure (150) which disrupts the WGM resonance; the filter (100) isolates and switches a specific wavelength signal from among a group of signals of different wavelengths; and is switched “off” by adjusting the index of refraction of the resonate structure to become substantially similar to the index of refraction of the surrounding medium.
    Type: Grant
    Filed: April 14, 2006
    Date of Patent: December 16, 2008
    Assignee: Arryx, Inc.
    Inventors: Kenneth Bradley, Ward Lopes
  • Patent number: 7460240
    Abstract: The present invention utilizes spatially modulated optical force microscopy (SMOFM) with single beam optical force probing capability or with a holographic optical trapping system capable of multi-beam optical force probing coupled to a microscope objective, to generate a probe beam(s) as a force probe to perturb the object that is adhered or resting on a surface, so that deformations of the object may subsequently be quantified. This quantification is performed by imaging a sequence of four phase shifted replicas of the image using a computer-controlled spatial light modulator, and calculating the pixel by pixel optical path-length using existing algorithms. The change in optical path lengths, and consequently the viscoelastic or elastic response elicited, is an indication of damage or disease when the objects are cells. In another embodiment, the optical deformability of the cells may be measured and correlated with measurements of cytoskeletal/structural protein expression.
    Type: Grant
    Filed: October 17, 2006
    Date of Patent: December 2, 2008
    Assignee: Arryx, Inc.
    Inventor: Osman Akcakir
  • Publication number: 20080285099
    Abstract: Holographic optical tweezers are used to position charge stabilized colloidal particles within a flow cell. Once the particles are positioned, fixation is accomplished by pumping an electrolyte solution or pH adjusted solution (or a combination of the two) into the sample cell. In the former, the Debye length is reduced and aggregation caused by the van der Waals attraction takes place. In the latter, the surface charge density of the suspension is reduced and aggregation caused by the van der Waals attraction takes place. This technique can be applied multiple times, and allows for the formation of two and three dimensional structures composed of multi-colloid types to be formed on or away from a substrate. The technique relies upon forces acting on virtually all colloidal dispersions making it applicable to a wide variety of colloid types and compositions, such as formation of photonic crystals, colloidal electronics, and bioengineered materials.
    Type: Application
    Filed: July 12, 2006
    Publication date: November 20, 2008
    Applicant: Arryx, Inc.
    Inventors: Christopher Knutson, Joseph Plewa
  • Patent number: 7449679
    Abstract: A method and apparatus for manipulating particles (micro, nano, and pico) having one or more characteristics with an optical trap formed by modulating a laser beam with a Diffractive Optical Element (DOE). At least one characteristic of the material is selected; and a laser beam having a selected wavelength corresponding to the at least one selected characteristic of the material is generated. Values of the DOE are calculated corresponding to the at least one selected characteristic of the material. The beam and the DOE are modulated to produce a holographic optical trap having properties corresponding to the at least one selected characteristic; the trap is focused to a beam focus or selected spot size; and the beam focus is located near a particle location for trapping the particle therein.
    Type: Grant
    Filed: March 15, 2005
    Date of Patent: November 11, 2008
    Assignee: Arryx, Inc.
    Inventors: Joseph Plewa, Evan Tanner, Daniel Mueth, Lewis Gruber, Kenneth Bradley
  • Patent number: 7411181
    Abstract: A method and apparatus for manipulating particles (micro, nano, and pico) having one or more characteristics with an optical trap formed by modulating a laser beam with a Diffractive Optical Element (DOE). At least one characteristic of the material is selected; and a laser beam having a selected wavelength corresponding to the at least one selected characteristic of the material is generated. Values of the DOE are calculated corresponding to the at least one selected characteristic of the material. The beam and the DOE are modulated to produce a holographic optical trap having properties corresponding to the at least one selected characteristic. The trap is focused to a beam focus or selected spot size; and the beam focus is located near a particle location for trapping the particle therein.
    Type: Grant
    Filed: October 28, 2004
    Date of Patent: August 12, 2008
    Assignee: Arryx, Inc.
    Inventors: Joseph Plewa, Evan Tanner, Dan Mueth, Lewis Gruber, Kenneth Bradley
  • Patent number: 7402131
    Abstract: The invention provides a method, apparatus and system for separating blood and other types of cellular components, and can be combined with holographic optical trapping manipulation or other forms of optical tweezing. One of the exemplary methods includes providing a first flow having a plurality of blood components; providing a second flow; contacting the first flow with the second flow to provide a first separation region; and differentially sedimenting a first blood cellular component of the plurality of blood components into the second flow while concurrently maintaining a second blood cellular component of the plurality of blood components in the first flow. The second flow having the first blood cellular component is then differentially removed from the first flow having the second blood cellular component. Holographic optical traps may also be utilized in conjunction with the various flows to move selected components from one flow to another, as part of or in addition to a separation stage.
    Type: Grant
    Filed: October 6, 2006
    Date of Patent: July 22, 2008
    Assignee: Arryx, Inc.
    Inventors: Daniel Mueth, Joseph Plewa, Jessica Shireman, Amy Anderson, Lewis Gruber, Neil Harris Rosenbaum
  • Patent number: 7390461
    Abstract: The present invention relates to a sensor for detecting chemical, biological, biochemical or other environmental stimuli, and includes a plurality of colloidal particles having chemical receptors bound to each particle's surface, wherein when a target stimulus is directed to the bound chemical receptor, the gelled matrix contracts or expands, which changes the lattice constant, thereby changing the pattern of diffracted light in a measurable manner so that the target stimulus' presence can be detected by a spectrometer. The plurality of colloidal particles are composed of a material having a first dielectric constant, and the gel and surrounding medium have a second dielectric constant. The colloidal particles can be assembled using holographic optical tweezers and polymerized to create an integrated sensor array, which diffracts light in a detectable characteristic manner.
    Type: Grant
    Filed: May 5, 2003
    Date of Patent: June 24, 2008
    Assignee: Arryx, Inc.
    Inventors: David G. Grier, Lewis Gruber
  • Publication number: 20080145627
    Abstract: Nanoscale masking using particles patterned on a substrate include assembling particles into a pattern on a first substrate; contacting the particles with a second substrate; adding blocking molecules while the particles are in contact, such that blocking molecules bind to portions of the second substrate not in contact with the particles; and separating the substrates, yielding a functionalized substrate having blocking molecules bound thereto. Nanoscale printing methods include assembling particles into a desired pattern on a first substrate; contacting a print material with the particles such that at least a portion of the print material binds to the particles on the first substrate; removing the first substrate having particles thereon from unbound print material; contacting the particles having print material bound thereto with a second substrate such that at least a portion of the print material binds to the second substrate; and separating the substrates, yielding a printed substrate.
    Type: Application
    Filed: July 3, 2007
    Publication date: June 19, 2008
    Applicant: ARRYX, INC.
    Inventor: Christopher Knutson
  • Publication number: 20080144037
    Abstract: Apparatus for sorting and orienting sperm cells has a pair or walls in confronting relationship forming a flow chamber having inlet, a downstream outlet, and intermediate detector region. The inlet receives first and second spaced apart streams of input fluid and a third stream of sample fluid containing the cells to be sorted. The first and second streams have respective flow rates relative to third stream, such that the third stream is constricted forming a relatively narrow sample stream, so that the cells are oriented parallel to the walls. A detector detects desired cells and a sorter downstream of the detector for sorting the desired cells from the stream.
    Type: Application
    Filed: February 14, 2008
    Publication date: June 19, 2008
    Applicant: ARRYX, INC.
    Inventors: Daniel Mueth, Amy L. Anderson, Christopher R. Knutson, Joseph Plewa