Abstract: Macrolactams are made by feeding aromatic amino acids as replacement starter units to a mutant strain of the geldanamycin-producing microorganism Streptomyces hygroscopicus var. geldanus NRRL 3602, wherein the gene cluster encoding enzymes for the biosynthesis of the natural starter unit 3-amino-5-hydroxybenzoic acid has been deleted.
Type:
Grant
Filed:
January 23, 2008
Date of Patent:
December 21, 2010
Assignee:
Kosan Biosciences, Inc.
Inventors:
Gary W. Ashley, Hugo Menzella, Janice Lau Wee, John R. Carney
Abstract: Polypeptides and domains of leptomycin polyketide synthase and the nucleic acids encoding them are provided. Methods to prepare leptomycin, leptomycin analogs, and leptomycin derivatives are described, as are methods to prepare other polyketides using the nucleic acids encoding leptomycin polyketide synthase domains or modifying enzymes.
Abstract: Recombinant nucleic acids that encode all or a portion of the epothilone polyketide synthase (PKS) are used to express recombinant PKS genes in host cells for the production of epothilones, epothilone derivatives, and polyketides that are useful as cancer chemotherapeutics, fungicides, and immunosuppressants.
Type:
Grant
Filed:
October 31, 2007
Date of Patent:
June 8, 2010
Assignee:
Kosan Biosciences, Inc.
Inventors:
Bryan Julien, Leonard Katz, Chaitan Khosla, Li Tang, Rainer Ziermann
Abstract: The present invention provides new trans-9,10-dehydroepothilone C and trans-9,10-dehydroepothilone D based derivative compounds, compositions and methods of inhibiting cellular hyperproliferation and/or stabilizing microtubules in vitro and of treatment of hyperproliferative diseases in vivo. Also disclosed are methods of making the compounds.
Type:
Application
Filed:
July 11, 2008
Publication date:
July 23, 2009
Applicant:
Kosan Biosciences, Inc.
Inventors:
Yong Li, Kurt Sundermann, Li Tang, David Myles
Abstract: Recombinant nucleic acids that encode all or a portion of the epothilone polyketide synthase (PKS) are used to express recombinant PKS genes in host cells for the production of epothilones, epothilone derivatives, and polyketides that are useful as cancer chemotherapeutics, fungicides, and immunosuppressants.
Type:
Application
Filed:
October 31, 2007
Publication date:
July 2, 2009
Applicant:
Kosan Biosciences, Inc.
Inventors:
Bryan Julien, Leonard Katz, Chaitan Khosla, Li Tang, Rainer Ziermann
Abstract: The invention relates to benzoquinone ansamycin analogs useful for the treatment of cancer and other diseases or conditions characterized by undesired cellular proliferation or hyperproliferation. Therapies involving the administration of such benzoquinone ansamycin analogs, optionally in combination with an inhibitor of an HSP90 client protein, are useful to treat cancer and non-cancerous disease conditions.
Type:
Application
Filed:
June 18, 2008
Publication date:
April 30, 2009
Applicant:
Kosan Biosciences, Inc.
Inventors:
Daniel SANTI, David C. Myles, Zong-Qiang Tian, C. Richard Hutchinson, Robert Johnson, Yi-Qing Zhou, Li Feng
Abstract: Recombinant host cells of the suborder Cystobacterineae containing recombinant expression vectors that encode heterologous PKS genes can produce polyketides synthesized by the PKS enzymes encoded on those vectors at high levels.
Type:
Application
Filed:
October 31, 2007
Publication date:
April 30, 2009
Applicant:
Kosan Biosciences, Inc.
Inventors:
Bryan Julien, Leonard Katz, Chaitan Khosla
Abstract: Intermediates in the preparation of epothilones and epothilone analogs are provided along with synthetic methods useful in the synthesis of epothilone compounds.
Abstract: The invention provides strategies, methods, vectors, reagents, and systems for production of synthetic genes, production of libraries of such genes, and manipulation and characterization of the genes and corresponding encoded polypeptides. In one aspect, the synthetic genes can encode polyketide synthase polypeptides and facilitate production of therapeutically or commercially important polyketide compounds.
Type:
Application
Filed:
August 20, 2007
Publication date:
November 6, 2008
Applicant:
Kosan Biosciences, Inc.
Inventors:
Daniel V. Santi, Ralph C. Reid, Sarah J. Kodumal, Sebastian Jayaraj
Abstract: The invention provides strategies, methods, vectors, reagents, and systems for production of synthetic genes, production of libraries of such genes, and manipulation and characterization of the genes and corresponding encoded polypeptides. In one aspect, the synthetic genes can encode polyketide synthase polypeptides and facilitate production of therapeutically or commercially important polyketide compounds.
Type:
Application
Filed:
August 20, 2007
Publication date:
October 23, 2008
Applicant:
Kosan Biosciences, Inc.
Inventors:
Daniel V. Santi, Ralph C. Reid, Sarah J. Kodumal, Sebastian Jayaraj
Abstract: Host cells, such as E. coli, are provided with an expression system for making starter units required for biosynthesis of polyketides using the ato pathway.
Type:
Grant
Filed:
July 15, 2003
Date of Patent:
August 19, 2008
Assignee:
Kosan Biosciences, Inc.
Inventors:
James T. Kealey, Linda C. Dayem, Daniel V. Santi
Abstract: The invention relates to benzoquinone ansamycin analogs useful for the treatment of cancer and other diseases or conditions characterized by undesired cellular proliferation or hyperproliferation. Therapies involving the administration of such benzoquinone ansamycin analogs, optionally in combination with an inhibitor of an HSP90 client protein, are useful to treat cancer and non-cancerous disease conditions.
Type:
Grant
Filed:
February 11, 2005
Date of Patent:
July 29, 2008
Assignee:
Kosan Biosciences, Inc.
Inventors:
Daniel Santi, David C. Myles, Zong-Qiang Tian, C. Richard Hutchinson, Robert Johnson, Yi-Qing Zhou, Li Feng
Abstract: Recombinant nucleic acids that encode all or a portion of the epothilone polyketide synthase (PKS) are used to express recombinant PKS genes in host cells for the production of epothilones, epothilone derivatives, and polyketides that are useful as cancer chemotherapeutics, fungicides, and immunosuppressants.
Type:
Grant
Filed:
May 18, 2004
Date of Patent:
July 22, 2008
Assignee:
Kosan Biosciences, Inc.
Inventors:
Bryan Julien, Leonard Katz, Chaitan Khosla, Li Tang, Rainer Ziermann
Abstract: Migrastatin and a migrastatin analog can be produced by fermentation of Streptomyces platensis NRRL 18993 and used in pharmaceutical formulations to treat cancer and/or inhibit metastasis of cancer cells.
Type:
Grant
Filed:
May 3, 2004
Date of Patent:
May 20, 2008
Assignee:
Kosan Biosciences, Inc.
Inventors:
Chaitan Khosla, Peter J. Licari, John R. Carney
Abstract: The sequence of the disorazole polyketide synthase protein gene is disclosed. Domains of disorazole polyketide synthase and polynucleotides encoding them are provided. Methods to prepare disorazoles in pharmaceutically useful quantities are described, as are methods to prepare disorazole analogs and other polyketides using the polynucleotides encoding disorazole polyketide synthase domains or modifying enzymes.
Abstract: Synthetic methods and intermediates useful in the preparation of lactone containing compounds such as discodermolide and compounds which mimic the chemical or biological activity of discodermolide are provided.
Type:
Grant
Filed:
April 2, 2004
Date of Patent:
March 11, 2008
Assignees:
The Trustees Of The University Of Pennsylvania, Kosan Biosciences, Inc.
Inventors:
David C. Myles, Mark Burlingame, Simon James Shaw, Kurt F. Sundermann, Brian Scott Freeze, Ignació Brouard Martin, Tomoyasu Hirose, Amos B. Smith, III
Abstract: Domains of ambruticin polyketide synthase and modification enzymes and polynucleotides encoding them are provided. Methods to prepare ambruticin in pharmaceutically useful quantities are described, as are methods to prepare ambruticin analogs and other polyketides using the polynucleotides encoding ambruticin synthase domains or modifying enzymes.
Type:
Grant
Filed:
March 7, 2005
Date of Patent:
February 19, 2008
Assignee:
Kosan Biosciences Inc.
Inventors:
Christopher D. Reeves, Bryan Julien, Ralph C. Reid
Abstract: Recombinant Myxococcus host cells can be used to produce polyketides, including epothilone and epothilone analogs that can be purified from the fermentation broth and crystallized.
Abstract: Recombinant Escherichia coli host cells that comprise recombinant DNA expression vectors that drive expression of methylmalonyl CoA mutase from Propionibacterium shermanii or Streptomyces cinnamonensis as well as Propionibacterium shermanii epimerase can produce S-methylmalonyl CoA, a required substrate for the production of polyketides by most modular polyketide synthases not present in wild-type E. coli host cells.
Type:
Grant
Filed:
April 21, 2004
Date of Patent:
November 6, 2007
Assignee:
KOSAN Biosciences, Inc.
Inventors:
Daniel Santi, Linda Dayem, James Kealey
Abstract: Compounds of the formula wherein Ra is H; substituted or unsubstituted alkyl (1-10C); substituted or unsubstituted alkenyl (2-10C); substituted or unsubstituted alkynyl (2-10C); substituted or unsubstituted aryl (4-14C); substituted or unsubstituted arylalkyl (5-20C); or ORa is replaced by H; Rb is H or halogen; Rc is H or a protecting group; Rd is methyl, unsubstituted alkyl (3-10C); substituted alkyl (1-10C); substituted or unsubstituted alkynyl (2-10C); substituted or unsubstituted aryl (4-14C); substituted or unsubstituted arylalkyl (5-20C); substituted or unsubstituted arylalkenyl (5-20C); substituted or unsubstituted arylalkynyl (5-20C); substituted or unsubstituted amidoarylalkyl (5-20C); substituted or unsubstituted amidoarylalkenyl (5-20C); or substituted or unsubstituted amidoarylalkynyl (5-20C); Re is H or a protecting group; L is methylene or carbonyl; T is —O—, —N(R)—, —N(OR)—, —N(NHCOR)—, —N(N?CHR)—, or —N(NHR)— wherein R is H or Ra as defined above, with the proviso that when L is methyl