Patents Assigned to Metabolix, Inc.
  • Patent number: 7741530
    Abstract: Methods and constructs for the introduction of multiple genes into plants using a single transformation event are described. Constructs contain a single 5? promoter operably linked to DNA encoding a modified intein splicing unit. The splicing unit is expressed as a polyprotein and consists of a first protein fused to an intein fused to a second protein. The splicing unit has been engineered to promote excision of all non-essential components in the polyprotein but prevent the ligation reactions normally associated with protein splicing. Additional genetic elements encoding inteins and additional proteins can be fused in frame to the 5?-terminus of the coding region for the second protein to form a construct for expression of more than two proteins. A single 3? termination sequence, follows the last coding sequence. These methods and constructs are particularly useful for creating plants with stacked input traits and/or value added products.
    Type: Grant
    Filed: June 8, 2005
    Date of Patent: June 22, 2010
    Assignee: Metabolix, Inc.
    Inventor: Kristi D. Snell
  • Patent number: 7732680
    Abstract: Methods and constructs for the introduction of multiple genes encoding enzymes in a multi-enzyme biosynthetic pathway are provided. In one embodiment, the constructs contain two or more enzyme-encoding genes, each under the control of an inducible promoter and each with a polyadenylation signal. The constructs are used to produce transgenic plants, in which the expression of the enzymes are increased when a chemical inducing agent is applied, and a biosynthetic product of the series of enzymes encoded by the transgenes is produced. Constructs may be used which contain two or more enzyme-encoding genes under the control of one or more promoters activated by activator molecules or complexes expressed from a transgene or transgenes, which are themselves under the control of one or more inducible promoters and switched on following the external application of a chemical.
    Type: Grant
    Filed: March 16, 2006
    Date of Patent: June 8, 2010
    Assignee: Metabolix, Inc.
    Inventors: Lauralynn Kourtz, Oliver P. Peoples, Kristi D. Snell
  • Patent number: 7718720
    Abstract: Nucleants and related compositions, articles, and methods are described.
    Type: Grant
    Filed: December 27, 2004
    Date of Patent: May 18, 2010
    Assignee: Metabolix Inc.
    Inventor: Allen R. Padwa
  • Patent number: 7713720
    Abstract: Polymer extraction methods are disclosed.
    Type: Grant
    Filed: July 2, 2007
    Date of Patent: May 11, 2010
    Assignee: Metabolix Inc.
    Inventors: Johan Van Walsem, Luhua Zhong, Simon S. Shih
  • Patent number: 7576173
    Abstract: The present invention provides methods for isolating a PHA. The method comprises combining the PHA, a first solvent and a second solvent to form a combination, the first solvent and the second solvent being capable of forming an azeotrope with the second solvent; and heating the combination to substantially remove the first solvent from the combination. Alternatively, the method comprises combining the PHA, a first solvent, a second solvent and a third solvent to form a combination, the first solvent and the second solvent being capable of forming an azeotrope with the third solvent; and heating the combination to substantially remove the first solvent and the second solvent from the combination.
    Type: Grant
    Filed: September 6, 2005
    Date of Patent: August 18, 2009
    Assignee: Metabolix Inc.
    Inventors: Johan Van Walsem, Erik Anderson, John Licata
  • Patent number: 7553923
    Abstract: Devices formed of or including biocompatible polyhydroxyalkanoates are provided with controlled degradation rates, preferably less than one year under physiological conditions. Preferred devices include sutures, suture fasteners, meniscus repair devices, rivets, tacks, staples, screws (including interference screws), bone plates and bone plating systems, surgical mesh, repair patches, slings, cardiovascular patches, orthopedic pins (including bone filling augmentation material), adhesion barriers, stents, guided tissue repair/regeneration devices, articular cartilage repair devices, nerve guides, tendon repair devices, atrial septal defect repair devices, pericardial patches, bulking and filling agents, vein valves, bone marrow scaffolds, meniscus regeneration devices, ligament and tendon grafts, ocular cell implants, spinal fusion cages, skin substitutes, dural substitutes, bone graft substitutes, bone dowels, wound dressings, and hemostats.
    Type: Grant
    Filed: October 26, 2007
    Date of Patent: June 30, 2009
    Assignee: Metabolix, Inc.
    Inventors: Simon F. Williams, David P. Martin, Frank A. Skraly
  • Patent number: 7504556
    Abstract: Methods for engineering transgenic organisms that synthesize polyhydroxyalkanoates (PHAs) containing 3-hydroxyhexanoate as comonomer have been developed. These processes are based on genetically engineered bacteria such as Escherichia coli or in plant crops as production systems which include PHA biosynthetic genes from PHA producers. In a preferred embodiment of the method, additional genes are introduced in wild type or transgenic polyhydroxybutyrate (PHB) producers, thereby creating new strains that synthesize 3HH monomers which are incorporated into PHAs. The 3HH monomer preferably is derived in microbial systems using butanol or butyrate as feedstocks, which are precursors of 3-hydroxyhexanoyl-CoA. Pathways for in vivo production of butyrol-CoA specifically encompassing butyryl-CoA dehydrogenase activity are provided.
    Type: Grant
    Filed: November 7, 2003
    Date of Patent: March 17, 2009
    Assignee: Metabolix, Inc.
    Inventors: Lara Madison, Gjalt W. Huisman, Oliver P. Peoples
  • Patent number: 7455999
    Abstract: Methods for engineering transgenic organisms that synthesize polyhydroxyalkanoates (PHAs) containing 3-hydroxyhexanoate as comonomer have been developed. These processes are based on genetically engineered bacteria such as Escherichia coli or in plant crops as production systems which include PHA biosynthetic genes from PHA producers. In a preferred embodiment of the method, additional genes are introduced in wild type or transgenic polyhydroxybutyrate (PHB) producers, thereby creating new strains that synthesize 3HH monomers which are incorporated into PHAs. The 3HH monomer preferably is derived in microbial systems using butanol or butyrate as feedstocks, which are precursors of 3-hydroxyhexanoyl-CoA. Pathways for in vivo production of butyrol-CoA specifically encompassing butyryl-CoA dehydrogenase activity are provided.
    Type: Grant
    Filed: January 22, 1999
    Date of Patent: November 25, 2008
    Assignee: Metabolix, Inc.
    Inventors: Lara Madison, Gjalt W. Huisman, Oliver P. Peoples
  • Publication number: 20070278157
    Abstract: Polymer extraction methods are disclosed.
    Type: Application
    Filed: July 2, 2007
    Publication date: December 6, 2007
    Applicant: METABOLIX INC.
    Inventors: Johan Walsem, Luhua Zhong, Simon Shih
  • Patent number: 7268205
    Abstract: Devices formed of or including biocompatible polyhydroxyalkanoates are provided with controlled degradation rates, preferably less than one year under physiological conditions. Preferred devices include sutures, suture fasteners, meniscus repair devices, rivets, tacks, staples, screws (including interference screws), bone plates and bone plating systems, surgical mesh, repair patches, slings, cardiovascular patches, orthopedic pins (including bone filling augmentation material), adhesion barriers, stents, guided tissue repair/regeneration devices, articular cartilage repair devices, nerve guides, tendon repair devices, atrial septal defect repair devices, pericardial patches, bulking and filling agents, vein valves, bone marrow scaffolds, meniscus regeneration devices, ligament and tendon grafts, ocular cell implants, spinal fusion cages, skin substitutes, dural substitutes, bone graft substitutes, bone dowels, wound dressings, and hemostats.
    Type: Grant
    Filed: January 16, 2007
    Date of Patent: September 11, 2007
    Assignee: Metabolix, Inc.
    Inventors: Simon F. Williams, David P. Martin, Frank A. Skraly
  • Patent number: 7252980
    Abstract: Polymer extraction methods are disclosed.
    Type: Grant
    Filed: July 23, 2003
    Date of Patent: August 7, 2007
    Assignee: Metabolix Inc.
    Inventors: Johan Van Walsem, Luhua Zhong, Simon S. Shih
  • Patent number: 7244442
    Abstract: Polyhydroxyalkanoates (PHAs) from which pyrogen has been removed are provided for use in numerous biomedical applications. PHAs which have been chemically modified to enhance physical and/or chemical properties, for targeting or to modify biodegradability or clearance by the reticuloendothelial system (RES), are described. Methods for depyrogenating PHA polymers prepared by bacterial fermentation processes are also provided, wherein pyrogens are removed from the polymers without adversely impacting the polymers' inherent chemical structures and physical properties. PHAs with advantageous processing characteristics, including low melting points and/or solubility in non-toxic solvents, are also described. PHAs are provided which are suitable for use in in vivo applications such as in tissue coatings, stents, sutures, tubing, bone and other prostheses, bone or tissue cements, tissue regeneration devices, wound dressings, drug delivery, and for diagnostic and prophylactic uses.
    Type: Grant
    Filed: August 15, 2003
    Date of Patent: July 17, 2007
    Assignee: Metabolix, Inc.
    Inventors: Simon F. Williams, David P. Martin, Tillman Gerngross, Daniel M. Horowitz
  • Patent number: 7230144
    Abstract: Methods of forming intermediates from PHAs are disclosed.
    Type: Grant
    Filed: December 18, 2002
    Date of Patent: June 12, 2007
    Assignee: Metabolix Inc.
    Inventors: Luhua Zhong, Edward M. Muller, James J. Barber, Joseph Pugach, Robert S. Whitehouse, Sean K. Daughtry
  • Patent number: 7229804
    Abstract: The gene encoding a 4-hydroxybutyryl-CoA transferase has been isolated from bacteria and integrated into the genome of bacteria also expressing a polyhydroxyalkanoate synthase, to yield an improved production process for 4HB-containing polyhydroxyalkanoates using transgenic organisms, including both bacteria and plants. The new pathways provide means for producing 4HB containing PHAs from cheap carbon sources such as sugars and fatty acids, in high yields, which are stable. Useful strains are obtaining by screening strains having integrated into their genomes a gene encoding a 4HB-CoA transferase and/or PHA synthase, for polymer production. Processes for polymer production use recombinant systems that can utilize cheap substrates. Systems are provided which can utilize amino acid degradation pathways, ?-ketoglutarate, or succinate as substrate.
    Type: Grant
    Filed: October 7, 2005
    Date of Patent: June 12, 2007
    Assignee: Metabolix, Inc.
    Inventors: Gjalt W. Huisman, Frank A. Skraly, David P. Martin, Oliver P. Peoples
  • Patent number: 7208535
    Abstract: PHA pellet compositions are provided which are processible into blown and cast free-standing films. The Mw of the PHA in the pellets used to produce the films is at least 470,000, at least 435,000 if PHA thermal stabilizers of the invention are used. In order to achieve a stable, unsupported film having desirable elongational and tensile properties, the Mw of PHA in the film is greater than about 420,000.
    Type: Grant
    Filed: August 6, 2003
    Date of Patent: April 24, 2007
    Assignee: Metabolix, Inc.
    Inventors: Jawed Asrar, Jean R. Pierre
  • Patent number: 7202064
    Abstract: Several novel PHA polymer compositions produced using biological systems include monomers such as 3-hydroxybutyrate, 3-hydroxypropionate, 2-hydroxybutyrate, 3-hydroxyvalerate, 4-hydroxybutyrate, 4-hydroxyvalerate and 5-hydroxyvalerate. These PHA compositions can readily be extended to incorporate additional monomers including, for example, 3-hydroxyhexanoate, 4-hydroxyhexanoate, 6-hydroxyhexanoate or other longer chain 3-hydroxyacids containing seven or more carbons. This can be accomplished by taking natural PHA producers and mutating through chemical or transposon mutagenesis to delete or inactivate genes encoding undesirable activities. Alternatively, the strains can be genetically engineered to express only those enzymes required for the production of the desired polymer composition. Methods for genetically engineering PHA producing microbes are widely known in the art (Huisman and Madison, 1998, Microbiology and Molecular Biology Reviews, 63: 21–53).
    Type: Grant
    Filed: June 20, 2003
    Date of Patent: April 10, 2007
    Assignee: Metabolix, Inc.
    Inventors: Frank A. Skraly, Oliver P. Peoples
  • Patent number: 7179883
    Abstract: Devices formed of or including biocompatible polyhydroxyalkanoates are provided with controlled degradation rates, preferably less than one year under physiological conditions. Preferred devices include sutures, suture fasteners, meniscus repair devices, rivets, tacks, staples, screws (including interference screws), bone plates and bone plating systems, surgical mesh, repair patches, slings, cardiovascular patches, orthopedic pins (including bone filling augmentation material), adhesion barriers, stents, guided tissue repair/regeneration devices, articular cartilage repair devices, nerve guides, tendon repair devices, atrial septal defect repair devices, pericardial patches, bulking and filling agents, vein valves, bone marrow scaffolds, meniscus regeneration devices, ligament and tendon grafts, ocular cell implants, spinal fusion cages, skin substitutes, dural substitutes, bone graft substitutes, bone dowels, wound dressings, and hemostats.
    Type: Grant
    Filed: December 22, 2004
    Date of Patent: February 20, 2007
    Assignee: Metabolix, Inc.
    Inventors: Simon F. Williams, David P. Martin, Frank A. Skraly
  • Patent number: 7166743
    Abstract: Methods of forming acrylic acid by heating a PHA are disclosed. The PHA can be derived from a biomass of a non-fossil source. The PHA can be, for example, poly 3-hydroxypropionate or a 3-hydroxypropionate containing polymer. The methods can include, for example, heating the PHA to a temperature of at least about 100° C. to form acrylic acid.
    Type: Grant
    Filed: April 4, 2005
    Date of Patent: January 23, 2007
    Assignee: Metabolix, Inc.
    Inventors: Luhua Zhong, Robert S. Whitehouse
  • Patent number: 7094840
    Abstract: Polyhydroxyalkanoate compositions including hot melt adhesive compositions, biodegradable wax compositions, and protective coating compositions are provided and include a low molecular weight polyhydroxyalkanoate, a terminally-modified polyhydroxyalkanoate, or both. The compositions are biodegradable and environmentally friendly. Methods of protecting an article, such as a food product like cheese, are also provided and include coating or encapsulating the article with a composition containing a low molecular weight polyhydroxyalkanoate, a terminally-modified polyhydroxyalkanoate, or both.
    Type: Grant
    Filed: October 25, 2001
    Date of Patent: August 22, 2006
    Assignee: Metabolix, Inc.
    Inventors: Robert S. Whitehouse, Luhua Zhong, Sean Daughtry
  • Patent number: 7081357
    Abstract: The gene encoding a 4-hydroxybutyryl-CoA transferase has been isolated from bacteria and integrated into the genome of bacteria also expressing a polyhydroxyalkanoate synthase, to yield an improved production process for 4HB-containing polyhydroxyalkanoates using transgenic organisms, including both bacteria and plants. The new pathways provide means for producing 4HB containing PHAs from cheap carbon sources such as sugars and fatty acids, in high yields, which are stable. Useful strains are obtaining by screening strains having integrated into their genomes a gene encoding a 4HB-CoA transferase and/or PHA synthase, for polymer production. Processes for polymer production use recombinant systems that can utilize cheap substrates. Systems are provided which can utilize amino acid degradation pathways, ?-ketoglutarate, or succinate as substrate.
    Type: Grant
    Filed: February 6, 2004
    Date of Patent: July 25, 2006
    Assignee: Metabolix, Inc.
    Inventors: Gjalt W. Huisman, Frank Skraly, David P. Martin, Oliver P. Peoples