Patents Assigned to Oregon Health Sciences University
  • Patent number: 10845071
    Abstract: A building may include a floor, a dome having a vent, and an internal ceiling that divides areas underneath the dome into first and second chambers. The internal ceiling may have an aperture that is structured to allow air to pass from the first chamber into the second chamber. The building may also include an air inlet configured to allow air to travel from outside the building into the first chamber and an air moving device that is configured to facilitate the movement of the air. The building may also include an air cooling element that is configured to cool the air as it travels from outside the building into the first chamber.
    Type: Grant
    Filed: June 7, 2019
    Date of Patent: November 24, 2020
    Assignee: Oregon Health & Science University
    Inventor: Perry Gliessman
  • Patent number: 10835159
    Abstract: A method or system for imaging and quantifying placental blood perfusion using magnetic resonance image. The method or system provides a noninvasive means of assessing placental function and oxygenation from T2* images without the administration of an exogenous contrast agent. The method or system provides quantitative information regarding the number and spatial distribution of perfusion domains which subdivide the placenta into functional units where oxygen transport occurs, along with estimates of fetal oxyhemoglobin concentration, descriptors of placental oxygen reserve, and parameters representing the facility with which oxygen transport from the maternal to fetal vasculature occurs.
    Type: Grant
    Filed: September 23, 2016
    Date of Patent: November 17, 2020
    Assignee: Oregon Health & Science University
    Inventors: Matthias Schabel, Antonio Frias, Christopher Kroenke
  • Publication number: 20200342595
    Abstract: An example method includes generating, using a multi-scale block of a convolutional neural network (CNN), a first output image based on an optical coherence tomography (OCT) reflectance image of a retina and an OCT angiography (OCTA) image of the retina. The method further includes generating, using an encoder of the CNN, at least one second output image based on the first output image and generating, using a decoder of the CNN, a third output image based on the at least one second output image. An avascular map is generated based on the third output image. The avascular map indicates at least one avascular area of the retina depicted in the OCTA image.
    Type: Application
    Filed: April 24, 2020
    Publication date: October 29, 2020
    Applicant: Oregon Health & Science University
    Inventors: Yali Jia, Yukun Guo
  • Publication number: 20200325092
    Abstract: Disclosed are halo substituted derivative compounds of sobetirome with improved pharmacological characteristics relative to sobetirome, pharmaceutical compositions that include those compounds and methods of treating diseases such as neurodegenerative disorders using those pharmaceutical compositions.
    Type: Application
    Filed: December 9, 2019
    Publication date: October 15, 2020
    Applicant: OREGON HEALTH & SCIENCE UNIVERSITY
    Inventors: Thomas SCANLAN, Jordan DEVEREAUX, Andrew PLACZEK, Tapasree BANERJI, Skylar FERRARA, James Matthew MEINIG, Tania BANERJI
  • Patent number: 10786541
    Abstract: A method of treating heart disease and/or injury in a subject includes administering to the subject a therapeutic agent that inhibits one or more of catalytic activity, signaling, and function of PTP?.
    Type: Grant
    Filed: February 19, 2019
    Date of Patent: September 29, 2020
    Assignees: CASE WESTERN RESERVE UNIVERSITY, OREGON HEALTH & SCIENCE UNIVERSITY
    Inventors: Bradley T. Lang, Jerry Silver, Ryan Gardner, Beth Habecker
  • Publication number: 20200288971
    Abstract: Disclosed herein are methods for simulating the results of a visual field (VF) test using an optical coherence tomography (OCT) system. The disclosed methods may utilize structural information extracted from OCT image datasets, such as thickness measurements, or may utilize functional information, such as blood perfusion measurements, extracted from OCT angiography (OCTA) image datasets.
    Type: Application
    Filed: March 16, 2020
    Publication date: September 17, 2020
    Applicant: Oregon Health & Science University
    Inventors: David Huang, Ou Tan, Liang Liu
  • Publication number: 20200283745
    Abstract: The present disclosure provides polypeptides that have the ability to repair DNA damage by recognizing and removing a wide variety of DNA damage and distortions in double-stranded DNA. In particular, the polypeptides have the ability to remove cyclobutane pyrimidine dimers (CPDs) and/or (6-4) photoproducts from DNA. The polypeptides include at least one heterologous targeting sequence.
    Type: Application
    Filed: November 14, 2018
    Publication date: September 10, 2020
    Applicant: Oregon Health & Science University
    Inventors: R. Stephen Lloyd, Amanda K. McCullough
  • Publication number: 20200276050
    Abstract: Disclosed are implantable ocular drainage devices that include a reversible switch mechanism to control flow through the drainage device. The devices include a drainage tube and a reversible, bi-stable switch mechanism that includes first and second stationary magnets spaced apart from one another and a magnetic or ferromagnetic mobile element moveably disposed in a channel in the housing.
    Type: Application
    Filed: September 11, 2018
    Publication date: September 3, 2020
    Applicant: Oregon Health & Science University
    Inventors: David SIMONS, Robert KINAST
  • Patent number: 10760097
    Abstract: Disclosed herein are recombinant CMV vectors which may comprise a heterologous antigen that can repeatedly infect an organism while inducing a CD8+ T cell response to immunodominant epitopes of the heterologous antigen. The CMV vector may comprise a deleterious mutation in the US11 glycoprotein or a homolog thereof.
    Type: Grant
    Filed: November 30, 2017
    Date of Patent: September 1, 2020
    Assignee: OREGON HEALTH & SCIENCE UNIVERSITY
    Inventors: Louis Picker, Klaus Früh, Scott G. Hansen
  • Publication number: 20200273218
    Abstract: Disclosed herein are methods and systems for automated detection of shadow artifacts in optical coherence tomography (OCT) and/or OCT angiography (OCTA). The shadow detection includes applying a machine-learning algorithm to the OCT dataset and the OCTA dataset to detect one or more shadow artifacts in the sample. The machine-learning algorithm is trained with first training data from first training samples that include manufactured shadows and no perfusion defects and second training data from second training samples that include perfusion defects and no manufactured shadows. The shadow artifacts in the OCTA dataset and/or OCT dataset may be suppressed to generate a shadow-suppressed OCTA dataset and/or a shadow-suppressed OCT dataset, respectively. Other embodiments may be described and claimed.
    Type: Application
    Filed: February 27, 2020
    Publication date: August 27, 2020
    Applicant: Oregon Health & Science University
    Inventors: Acner Camino, David Huang, Yali Jia
  • Patent number: 10746742
    Abstract: Disclosed herein are methods of high-throughput mapping of viral neutralizing antibody epitopes. Also disclosed are in vitro immunoprecipitation-based adenoassociated virus Barcode-Seq-based methods of mapping viral neutralizing antibody epitopes. In some embodiments, a method of high-throughput mapping of viral NtAb conformational epitopes can be utilized, which may comprise HP scanning of mutant viral libraries, immunoprecipitation (IP), and/or next-generation sequencing (NGS) technology. In some embodiments, a method of identifying one or more dominant epitopes in a viral vector may comprise contacting a mutant capsid of a virus with serum from a subject previously exposed to the virus and immunopredpitating serum immunoglobulins from the serum. In various embodiments, the viral vector may be an AAV vector.
    Type: Grant
    Filed: April 24, 2015
    Date of Patent: August 18, 2020
    Assignee: OREGON HEALTH & SCIENCE UNIVERSITY
    Inventors: Hiroyuki Nakai, Kei Adachi
  • Publication number: 20200237898
    Abstract: Provided herein are optimized recombinant influenza HA polypeptides that elicit immune responses. Also provided are compositions and kits comprising the optimized HA polypeptides as well as methods of making and using the optimized HA polypeptides.
    Type: Application
    Filed: September 21, 2016
    Publication date: July 30, 2020
    Applicant: OREGON HEALTH & SCIENCE UNIVERSITY
    Inventors: Ted Milburn Ross, Terrianne Maiko Wong, Donald Martin Carter, Jr., Corey John Crevar
  • Publication number: 20200219619
    Abstract: An example method includes identifying training data indicating features of a sample population and clinical outcomes of the sample population. The clinical outcomes are associated with a heterogeneous condition. The method further includes generating decision trees in a Random Forest (RF) based on the training data, each one of the decision trees being configured to divide the sample population into multiple categories based on the features of the sample population. In response to generating the decision trees, a proximity matrix comprising multiple entries is generated using the RF. One of the entries indicates a proportion of the decision trees that categorize a first individual among the sample population and a second individual among the sample population into the same categories among the multiple categories. The method further includes identifying subgroups of the heterogeneous condition by detecting communities of the proximity matrix.
    Type: Application
    Filed: December 19, 2019
    Publication date: July 9, 2020
    Applicant: Oregon Health & Science University
    Inventors: Eric Feczko, Damien A. Fair, Shannon McWeeney
  • Patent number: 10702303
    Abstract: Retreating stop ultrasound needle guide systems are disclosed. In one example approach, a needle guide system includes a guiding component which can be positioned at different locations and angles on a mounting component, where the mounting component can be coupled to a distal end of an ultrasound probe. When positioned at the different locations and angles on the mounting component, the guiding component can guide a needle through the skin of a patient at a constant point and when the needle is advanced so that a hub of the needle reaches a stop of the guiding component, a tip of the needle is positioned directly underneath the ultrasound at a pre-selected depth.
    Type: Grant
    Filed: February 18, 2015
    Date of Patent: July 7, 2020
    Assignee: Oregon Health & Science University
    Inventor: Andrew Neice
  • Patent number: 10689446
    Abstract: Disclosed are recombinant CD74 polypeptides mutated relative to the naturally occurring CD74 polypeptides with improved properties such as binding of CD74 ligands such as MIF and RTL1000 as well as polynucleotides that encode the polypeptides, expression vectors comprising the polynucleotides, bacteria that include the expression vectors, and methods of making the recombinant polypeptides.
    Type: Grant
    Filed: June 21, 2017
    Date of Patent: June 23, 2020
    Assignees: OREGON HEALTH & SCIENCE UNIVERSITY, THE UNITED STATES GOVERNMENT AS REPRESENTED BY THE DEPARTMENT OF VETERANS AFFAIRS
    Inventors: Roberto Meza-Romero, Gil Benedek, Arthur A. Vandenbark
  • Patent number: 10688164
    Abstract: Disclosed herein are recombinant CMV vectors comprising heterologous antigens and microRNA recognition elements to silence expression of CMV genes in the presence of microRNA derived from myeloid cells, an active UL128 protein and an active UL130 protein. Also disclosed are recombinant CMV vectors comprising heterologous antigens and microRNA recognition elements to silence expression of CMV genes in the presence of microRNA derived from myeloid cells, an inactive UL128 protein and an inactive UL130 protein. Also disclosed are methods of generating an unconventional immune response using these vectors. Such an immune response is characterized by generation of a CD8+ T cell response that is predominantly restricted by MHC-II.
    Type: Grant
    Filed: November 20, 2016
    Date of Patent: June 23, 2020
    Assignee: OREGON HEALTH & SCIENCE UNIVERSITY
    Inventors: Jay Nelson, Scott Hansen, Meaghan H. Hancock, Louis Picker, Klaus Frueh
  • Publication number: 20200181103
    Abstract: Ester derivatives of sobetirome with enhanced CNS distribution are disclosed.
    Type: Application
    Filed: July 12, 2019
    Publication date: June 11, 2020
    Applicant: OREGON HEALTH & SCIENCE UNIVERSITY
    Inventors: Thomas S. Scanlan, Andrew Placzek, Tapasree Banerji, Sky Ferrara, James Matthew Meinig
  • Publication number: 20200143906
    Abstract: The invention is directed to methods for selecting a treatment option for an activated B cell-like diffuse large B cell lymphoma (ABC DLBCL) subject, a germinal center B cell-like diffuse large B cell lymphoma (GCB DLBCL) subject, a primary mediastinal B cell lymphoma (PMBL) subject, a Burkitt lymphoma (BL) subject, or a mantle cell lymphoma (MCL) subject by analyzing digital gene expression data obtained from the subject, e.g., from a biopsy sample.
    Type: Application
    Filed: January 17, 2020
    Publication date: May 7, 2020
    Applicants: The United States of America,as represented by the Secretary,Department of Health and Human Services, British Columbia Cancer Agency Branch, Arizona Board of Regents on Behalf of the University of Arizona, Universitat de Barcelona, Hospital Clinic de Barcelona, The Cleveland Clinic Foundation, Board of Regents of the University of Nebraska, Oregon Health & Science University, Julius-Maximilians-University of Würzburg, Oslo University Hospital HF
    Inventors: Louis M. Staudt, George W. Wright, David William Scott, Joseph M. Connors, Randy D. Gascoyne, Lisa Rimsza, Elias Campo Guerri, Raymond Tubbs (Deceased), Timothy C. Greiner, James Robert Cook, Kai Fu, Paul Michael Williams, Chih-Jian Lih, Elaine S. Jaffe, Rita M. Braziel, Andreas Rosenwald, Erlend B. Smeland, Wing C. Chan, German Ott, Jan Delabie, Dennis Weisenburger
  • Patent number: 10631730
    Abstract: Methods and systems for suppressing shadowgraphic flow projection artifacts in OCT angiography images of a sample are disclosed. In one example approach, normalized OCT angiography data is analyzed at the level of individual A-scans to classify signals as either flow or projection artifact. This classification information is then used to suppress projection artifacts in the three dimensional OCT angiography dataset.
    Type: Grant
    Filed: February 4, 2019
    Date of Patent: April 28, 2020
    Assignee: Oregon Health & Science University
    Inventors: David Huang, Yali Jia, Miao Zhang
  • Patent number: 10633662
    Abstract: Compositions and methods are provided for modulating adeno-associated virus (AAV) infection. For example, compositions and methods are provided for enhancing permissiveness of a target cell to AAV infection (e.g., by increasing levels of AAVR (KIAA0319L) in the cell), for reducing permissiveness of a target cell to AAV infection (e.g., by reducing levels of AAVR in the cell), and for nucleic acid delivery (e.g., by (i) increasing permissiveness of a target cell to AAV infection, e.g., by increasing the amount of AAVR in the cell; and (ii) contacting the target cell with an AAV particle that includes a nucleic acid of interest). Also provided are screening methods and kits for practicing the methods of the disclosure.
    Type: Grant
    Filed: November 9, 2016
    Date of Patent: April 28, 2020
    Assignees: The Board of Trustees of the Leland Stanford Junior University, Oregon Health & Science University
    Inventors: Sirika Pillay, Jan Carette, Michael Stewart Chapman, Nancy Meyer, Andreas Puschnik, Omar Davulcu