Abstract: The present invention provides methods for repurposing beads and other solid supports for separately capturing RNA and DNA without a loss of binding capacity by using a surfactant.
Abstract: The present invention provides methods, compositions and kits for detecting duplicate sequencing reads. In some embodiments, the duplicate sequencing reads are removed.
Type:
Grant
Filed:
July 21, 2021
Date of Patent:
August 15, 2023
Assignee:
Tecan Genomics, Inc.
Inventors:
Douglas A. Amorese, Jonathan Scolnick, Ben Schroeder
Abstract: Provided herein are methods, compositions and kits for the generation of bisulfite-converted next generation sequencing (NGS) libraries. The methods, compositions and kits provided herein can be useful, for example, for the production of libraries from genomic DNA that allow for determination of the methylation status across the genome, i.e. the methylome. The methods, compositions and kits provided herein can also be utilized to query methylation status at a particular genomic locus or loci. Moreover, the methods provided herein can be employed for high-throughput sequencing of bisulfite-converted DNA while maintaining the directional (strandedness) information of the original nucleic acid sample.
Abstract: The present invention provides methods, compositions and kits for detecting duplicate sequencing reads. In some embodiments, the duplicate sequencing reads are removed.
Type:
Grant
Filed:
January 15, 2020
Date of Patent:
August 24, 2021
Assignee:
TECAN GENOMICS, INC.
Inventors:
Douglas A. Amorese, Jonathan Scolnick, Ben Schroeder
Abstract: Prepackaged reagent reservoirs with associated nozzles allow for accurate, repeatable distribution of reagents in various types of reactions, reducing the risk of human error. Series of reservoirs may be arrayed on a sheet or plane for automated manipulation providing a simply format for organizing, storing, transporting, and distributing reagents needed in complex reactions such as those in the molecular biology field.
Type:
Grant
Filed:
October 20, 2017
Date of Patent:
August 24, 2021
Assignee:
TECAN GENOMICS, INC.
Inventors:
Douglas A. Amorese, Nitin Sood, Philip John Rawlins, Sebastian Georg Rammensee, Michael Ian Walker, Thomas William Broughton, Michiel Clemens Rene Twisk, Jonathan Patrick Casey, Michael Roy Fairs, Neil Pollock, Nuno Varelas, Giles Hugo William Sanders
Abstract: Described herein are improved methods, compositions and kits for next generation sequencing (NGS). The methods, compositions and kits described herein enable phasing of two or more nucleic acid sequences in a sample, i.e. determining whether the nucleic acid sequences (which can comprise regions of sequence variation) are located on the same chromosome and/or the same chromosomal fragment. Phasing information can be obtained by performing multiple, successive sequencing reactions from the same immobilized nucleic acid template. The methods, compositions and kits provided herein can be useful, for example, for haplotyping, SNP phasing, or for determining downstream exons in RNA-seq.
Type:
Grant
Filed:
November 10, 2017
Date of Patent:
April 14, 2020
Assignee:
Tecan Genomics
Inventors:
Doug Amorese, Benjamin G. Schroeder, Jonathan Scolnick
Abstract: The present invention provides methods, compositions and kits for detecting duplicate sequencing reads. In some embodiments, the duplicate sequencing reads are removed.
Type:
Grant
Filed:
January 13, 2017
Date of Patent:
February 25, 2020
Assignee:
Tecan Genomics
Inventors:
Douglas Amorese, Jonathan Scolnick, Ben Schroeder