Patents Examined by Amy Bowman
  • Patent number: 9512427
    Abstract: The present invention relates to antisense oligonucleotides that modulate the expression of and/or function of an Antiviral gene, in particular, by targeting natural antisense polynucleotides of an Antiviral gene. The invention also relates to the identification of these antisense oligonucleotides and their use in treating diseases and disorders associated with the expression of Antiviral genes.
    Type: Grant
    Filed: July 31, 2015
    Date of Patent: December 6, 2016
    Assignee: CuRNA, Inc.
    Inventors: Joseph Collard, Olga Khorkova Sherman
  • Patent number: 9506065
    Abstract: MicroRNA genes are highly associated with chromosomal features involved in the etiology of different cancers. The perturbations in the genomic structure or chromosomal architecture of a cell caused by these cancer-associated chromosomal features can affect the expression of the miR gene(s) located in close proximity to that chromosomal feature. Evaluation of miR gene expression can therefore be used to indicate the presence of a cancer-causing chromosomal lesion in a subject. As the change in miR gene expression level caused by a cancer-associated chromosomal feature may also contribute to cancerigenesis, a given cancer can be treated by restoring the level of miR gene expression to normal. microRNA expression profiling can be used to diagnose cancer and predict whether a particular cancer is associated with an adverse prognosis. The identification of specific mutations associated with genomic regions that harbor miR genes in CLL patients provides a means for diagnosing CLL and possibly other cancers.
    Type: Grant
    Filed: September 4, 2015
    Date of Patent: November 29, 2016
    Assignee: Thomas Jefferson University
    Inventors: Carlo M. Croce, Chang-Gong Liu, George A. Calin, Cinzia Sevignani
  • Patent number: 9504706
    Abstract: Disclosed are compositions and methods for the treatment of disorders such as myelodysplastic syndrome (MDS) and acute myeloid leukemia (AML). The disclosed methods include administering to an individual in need of such treatment a composition that may include an IRAK1/4 inhibitor. In other aspects, the method may include administration of a BLC2 inhibitor.
    Type: Grant
    Filed: September 1, 2015
    Date of Patent: November 29, 2016
    Assignee: Children's Hospital Medical Center
    Inventors: Daniel Starczynowski, Garrett W. Rhyasen
  • Patent number: 9506070
    Abstract: The present invention provides an aptamer binding to midkine and capable of forming a potential secondary structure represented by the formula (I): wherein X1, X2, X5 and X6 are the same or different and each is one or two nucleotides selected from the group consisting of A, G, C, U and T, or a bond, X1 and X6, and X2 and X5 each form a Watson-Crick base pairs, and X3 and X4 are the same or different and each is a nucleotide selected from A, G, C, U and T.
    Type: Grant
    Filed: November 21, 2013
    Date of Patent: November 29, 2016
    Assignees: RIBOMIC INC., OTSUKA PHARMACEUTICAL CO., LTD.
    Inventors: Shin Miyakawa, Masatoshi Fujiwara, Yoshikazu Nakamura, Kenji Kadomatsu, Ping Mu
  • Patent number: 9499819
    Abstract: The present invention provides pharmaceutical formulations for oral administration of antisense oligonucleotides, such as antisense oligonucleotides against SMAD7. The pharmaceutical formulations can be used to treat Crohn's disease, ulcerative colitis and chronic inflammatory bowel disease.
    Type: Grant
    Filed: December 15, 2014
    Date of Patent: November 22, 2016
    Assignee: Nogra Pharma Limited
    Inventors: Sergio Baroni, Salvatore Bellinvia, Francesca Viti
  • Patent number: 9499821
    Abstract: An embodiment of the invention provides a method of preventing or treating a viral infection of a host, comprising administering to the host an effective amount of an inhibitor of the protein LSD1 and/or a monoamine oxidase inhibitor. Another embodiment of the invention provides a method of preventing or treating reactivation of a virus after latency in a host, comprising administering to the host an effective amount of an inhibitor of the protein LSD1 and/or a monoamine oxidase inhibitor. Another embodiment of the invention provides a method of preventing or treating a viral infection in a mammal that has undergone, is undergoing, or will undergo an organ or tissue transplant, comprising administering to the mammal an effective amount of an inhibitor of the protein LSD1 and/or a monoamine oxidase inhibitor before, during, and/or after the organ or tissue transplant.
    Type: Grant
    Filed: November 17, 2014
    Date of Patent: November 22, 2016
    Assignee: The United States of America, as represented by the Secretary, Department of Health and Human Services
    Inventors: Thomas Kristie, Yu Liang, Jodi Vogel
  • Patent number: 9493774
    Abstract: The invention relates to various PCSK9 RNAi constructs with gene silencing activities, and uses thereof. The construct has a double-stranded region of 19-49 nucleotides, preferably 25, 26, or 27 nucleotides, and preferably blunt-ended. The construct has selective minimal modifications to confer an optimal balance of biological activity, toxicity, stability, and target gene specificity. The sense strand may be modified such that the construct is not cleaved by Dicer or other RNAse III, and the entire length of the antisense strand is loaded into RISC. In addition, the antisense strand may also be modified by 2?-O-methyl groups at the 2nd 5?-end nucleotide to greatly reduce off-target silencing. The constructs of the invention largely avoid the interferon response and sequence-independent apoptosis in mammalian cells, exhibits better serum stability, and enhanced target specificity.
    Type: Grant
    Filed: January 5, 2010
    Date of Patent: November 15, 2016
    Assignee: RXi Pharmaceuticals Corporation
    Inventors: Joanne Kamens, Anastasia Khvorova
  • Patent number: 9486540
    Abstract: Disclosed herein are methods and compositions for the treatment of diseases of the CNS with nucleic acid nanoparticles. Compositions are also disclosed herein that utilize nucleic acid nanoparticles to treat conditions such as Parkinson's Disease. Furthermore, methods of intranasally administering the compacted nucleic acid nanoparticles for therapeutic purposes in the brain are disclosed.
    Type: Grant
    Filed: March 11, 2013
    Date of Patent: November 8, 2016
    Assignees: Northeastern University, Copernicus Therapeutics, Inc.
    Inventors: Brendan Harmon, Barbara Lee Waszczak, Mark Cooper
  • Patent number: 9487785
    Abstract: The present invention relates to novel short interfering RNA (siRNA) molecules that are multi-targeted. More specifically, the present invention relates to siRNA molecules that target two or more sequences. In one embodiment, multi-targeting siRNA molecules are designed to incorporate features of siRNA molecules and features of micro-RNA (miRNA) molecules. In another embodiment, multi-targeting siRNA molecules are designed so that each strand is directed to separate targets.
    Type: Grant
    Filed: December 22, 2014
    Date of Patent: November 8, 2016
    Assignee: CITY OF HOPE
    Inventors: John J. Rossi, Ola Snove, Jr., Ali Ehsani, Pal Saetrom, Jr., Britta Vallazza, Jane Zhang, Lars Aagaard
  • Patent number: 9486473
    Abstract: The present invention provides novel microRNAs and their uses.
    Type: Grant
    Filed: December 10, 2013
    Date of Patent: November 8, 2016
    Assignee: YMIR Genomics, LLC
    Inventors: P. Shannon Pendergrast, R. Scott Pendergrast, J. Stephen Pendergrast, Anna Irmina Markowska, Fred R. Huettig
  • Patent number: 9476042
    Abstract: The present invention is directed to methods and compositions capable of blocking the inhibitory effect of a newly-identified intronic inhibitory sequence element, named ISS-N1 (for “intronic splicing silencer”), located in the SMN2 gene. The compositions and methods of the instant invention include oligonucleotide reagents (e.g., oligoribonucleotides) that effectively target the SMN2 ISS-N1 site in the SMN2 pre-mRNA, thereby modulating the splicing of SMN2 pre-mRNA to include exon 7 in the processed transcript. The ISS-N1 blocking agents of the invention cause elevated expression of SMN protein, thus compensating for the loss of SMN protein expression commonly observed in subjects with spinal muscular atrophy (SMA).
    Type: Grant
    Filed: October 15, 2013
    Date of Patent: October 25, 2016
    Assignee: UNIVERSITY OF MASSACHUSETTS
    Inventors: Ravindra N. Singh, Natalia N. Singh, Nirmal K. Singh, Elliot J. Androphy
  • Patent number: 9469854
    Abstract: The present invention relates to a pharmaceutical composition for treating liver diseases, comprising a miRNA mimic containing a single strand RNA molecule of hsa-miR-21-3p (SEQ ID No: 35). The miRNA mimic of the present invention can be used to treat liver diseases through regulating the expression of methionine adenosyltransferase 2A and 2B (MAT2A and MAT2B), acetyl-CoA carboxylase 1 and 2 (ACACA and ACACB), diglyceride acyltransferase 2 (DGAT2), and so on. In addition, the present invention also relates to a method for reducing the expression of the above-mentioned enzymes.
    Type: Grant
    Filed: October 2, 2015
    Date of Patent: October 18, 2016
    Assignee: ACADEMIA SINICA
    Inventors: Shui-Tein Chen, Ting-Fang Lo, Wei-Chung Tsai
  • Patent number: 9469855
    Abstract: The present invention provides a method of treating, attenuating or preventing a liver disorder by inhibiting NGn4 expression and thereby modulating the activity of NK cells. The present invention further relates to diagnosing a liver disorder by evaluating NLGn4 expression in NK cells.
    Type: Grant
    Filed: December 9, 2015
    Date of Patent: October 18, 2016
    Assignee: Hadasit Medical Research Services and Development Ltd.
    Inventor: Rifaat Safadi
  • Patent number: 9468670
    Abstract: Methods and composition for a melatonin signaling modulator-based diagnosis and therapy are described. For example, in certain aspects methods for administering an anti-tumor therapy using a melatonin signaling modulator are described. Furthermore, the invention provides compositions and methods for detecting biliary tract disease such as cholangiocarcinoma.
    Type: Grant
    Filed: April 2, 2012
    Date of Patent: October 18, 2016
    Assignees: Texas A&M University System, The United States of America as Represented by the Department of Veterans Affairs, Scott & White Healthcare
    Inventors: Gianfranco Alpini, Sharon DeMorrow, Shannon Glaser
  • Patent number: 9457042
    Abstract: The invention is based on a finding that silencing CIP2A (KI-AA1524) gene sensitizes cancer cells for apoptosis-inducing activity of certain small molecule chemotherapeutic agents. Thus, the invention is directed to a respective combination therapy, sensitization method and pharmaceutical compositions. The invention further relates to a method of selecting cancer therapy for a subject on the basis of CIP2A and p53 expression and/or protein activity in a sample obtained from said subject.
    Type: Grant
    Filed: September 6, 2012
    Date of Patent: October 4, 2016
    Assignee: TURUN YLIOPISTO
    Inventors: Jukka Westermarck, Anna Cvrljevic
  • Patent number: 9458461
    Abstract: The present invention is related to an siRNA comprising an antisense strand and a sense strand, wherein all or a portion of said antisense strand comprises an antisense duplex region, wherein all or a portion of said sense strand comprises a sense duplex region, wherein said antisense duplex region is at least partially complementary to said sense duplex region, wherein said siRNA comprises a duplex region consisting of said antisense duplex region and said sense duplex region, and wherein: a) said antisense strand comprises a nucleotide sequence of SEQ ID NO: 2, 4, 6, 8, 10, 12, 14, 16, 18, 20, 22, 24, 26, 28, 30, 32, 34, 36, 38, 40, 42, 44, 46, 48, 50, 52, 54, 56, 58, 60, 62, 64, 68, 74, 76, 78, 80, 82, 84, 86, 88, 90, 92, 94, 96, 98, 100, 102 or 104; or b) said antisense strand comprises an antisense duplex region, all or a portion of which, is complementary to a portion of SEQ ID NO: 1 or 70.
    Type: Grant
    Filed: May 29, 2014
    Date of Patent: October 4, 2016
    Assignee: SILENCE THERAPEUTICS GMBH
    Inventors: Ansgar Santel, Jörg Kaufmann, Martin Witzenrath
  • Patent number: 9452182
    Abstract: Methods for treating a subject determined to have a cancer comprising a heterozygous inactivation of a housekeeping gene (or a homozygous deletion of a functionally redundant housekeeping gene) by treating the subject with an inhibitor of the gene. For example, a subject having a cancer with an ENO gene deletion can be treated with a glycolysis inhibitor, such as an enolase inhibitor. In some aspects, a subject having a cancer with an ARS gene deletion can be treated with an ARS inhibitor.
    Type: Grant
    Filed: December 14, 2012
    Date of Patent: September 27, 2016
    Assignees: Board of Regents, The University of Texas System, Dana-Farber Cancer Institute, Inc.
    Inventors: Florian L. Muller, Eliot Fletcher-Sananikone, Simona Colla, Elisa Aquilanti, Ronald DePinho
  • Patent number: 9453261
    Abstract: Disclosed are novel splicing variants of the genes associated with prostate cancer risk and survival, particularly splicing variants of PIK3CD, FGFR3, TSC2, RASGRP2, ITGA4, MET, NF1 and BAK1. The disclosure also relates risk assessment, detection, diagnosis, or prognosis of prostate cancer. More specifically, this disclosure relates to the detection of certain splicing variants of PIK3CD, FGFR3, TSC2, RASGRP2, ITGA4, MET, NF1 and BAK1.
    Type: Grant
    Filed: September 20, 2012
    Date of Patent: September 27, 2016
    Assignee: The George Washington University
    Inventors: Norman H. Lee, Steven R. Patierno, Bi-Dar Wang
  • Patent number: 9446175
    Abstract: Methods for treating or preventing neointima stenosis are disclosed. The methods generally involve the use of a TGF? inhibitor, a SMAD2 inhibitor, an FGF Receptor agonist, a Let-7 agonist, or a combination thereof, to inhibit endothelial-to-mesenchymal transition (Endo-MT) of vascular endothelial cells into smooth muscle cells (SMC) at sites of endothelial damage. The disclosed methods can therefore be used to prevent or inhibit neointimal stenosis or restenosis, e.g., after angioplasty, vascular graft, or stent. Also disclosed are methods for increasing the patency of biodegradable, synthetic vascular grafts using a composition that inhibits Endo-MT. A cell-free tissue engineered vascular graft (TEVG) produced by this method is also disclosed.
    Type: Grant
    Filed: June 4, 2012
    Date of Patent: September 20, 2016
    Assignee: Yale University
    Inventors: Christopher Breuer, Tarek Fahmy, Michael Simons, Pei-Yu Chen, Daniel Rowe Duncan, Joseph Patterson
  • Patent number: 9441223
    Abstract: A method that includes measuring the expression level of at least one transposon in a biological sample from a subject; and determining whether the measured transposon expression exceeds a predetermined level, and if so, administering to the subject a transposon inhibitor in an amount effective to reduce the expression level of a transposon.
    Type: Grant
    Filed: September 5, 2013
    Date of Patent: September 13, 2016
    Assignee: Cold Spring Harbor Laboratory, LLC
    Inventors: Josh Dubnau, Wanhe Li, Lisa Prazak, Molly Hammell, Ying Jin