Patents by Inventor David Colby

David Colby has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20260079163
    Abstract: Characterization of the binding dynamics at the interface between any two proteins that specifically interact plays a role in myriad biomedical applications. The methods disclosed herein provide for the high-throughput characterization of the specific interaction at the interface between two protein binding partners and the identification of functionally significant mutations of one or both protein binding partners. For example, the methods disclosed herein may be useful for epitope and paratope mapping of an antibody-antigen pair, which is useful for the discovery and development of novel therapies, vaccines, diagnostics, among other biomedical applications.
    Type: Application
    Filed: August 18, 2025
    Publication date: March 19, 2026
    Applicant: A-Alpha Bio, Inc.
    Inventors: David Younger, David Colby, Randolph Lopez, Michael Wittkind
  • Publication number: 20250250234
    Abstract: In one aspect, the disclosure relates to a method for the in situ generation of formaldehyde for the hydroxymethylation of difluoroenolates to create 2,2-difluoroethanols having a range of solubilities, acidity, basicity, and other physical properties. The method also allows the production of formaldehyde-d2 for hydroxy deuteromethylations and constitutes a new synthetic method for 2,2-difluoro-1,1-deuteroethanols. In one aspect, disclosed method is compatible with ?,?-difluorobenzyl carbanions generated from the release of trifluoroacetate from electron-deficient aromatic and heteroaromatic rings and can be conducted under mild conditions with high yields. Also disclosed herein are 2,2-difluoroethanols generated by the disclosed method and methods of using the 2,2-difluoroethanols as solvents or co-solvents for organic synthesis, metal catalyzed reactions, asymmetric processes, carbohydrate chemistry, and medicinal chemistry.
    Type: Application
    Filed: April 11, 2023
    Publication date: August 7, 2025
    Inventors: David Colby, Baharul Islam
  • Patent number: 11726097
    Abstract: Characterization of the binding dynamics at the interface between any two proteins that specifically interact plays a role in myriad biomedical applications. The methods disclosed herein provide for the high-throughput characterization of the specific interaction at the interface between two protein binding partners and the identification of functionally significant mutations of one or both protein binding partners. For example, the methods disclosed herein may be useful for epitope and paratope mapping of an antibody-antigen pair, which is useful for the discovery and development of novel therapies, vaccines, diagnostics, among other biomedical applications.
    Type: Grant
    Filed: September 2, 2022
    Date of Patent: August 15, 2023
    Assignee: A-Alpha Bio, Inc.
    Inventors: David Younger, David Colby, Randolph Lopez, Michael Wittekind
  • Publication number: 20230003737
    Abstract: Characterization of the binding dynamics at the interface between any two proteins that specifically interact plays a role in myriad biomedical applications. The methods disclosed herein provide for the high-throughput characterization of the specific interaction at the interface between two protein binding partners and the identification of functionally significant mutations of one or both protein binding partners. For example, the methods disclosed herein may be useful for epitope and paratope mapping of an antibody-antigen pair, which is useful for the discovery and development of novel therapies, vaccines, diagnostics, among other biomedical applications.
    Type: Application
    Filed: September 2, 2022
    Publication date: January 5, 2023
    Applicants: A-Alpha Bio, Inc., Olympic Protein Sciences LLC
    Inventors: David Younger, David Colby, Randolph Lopez, Michael Wittekind
  • Patent number: 11474111
    Abstract: Characterization of the binding dynamics at the interface between any two proteins that specifically interact plays a role in myriad biomedical applications. The methods disclosed herein provide for the high-throughput characterization of the specific interaction at the interface between two protein binding partners and the identification of functionally significant mutations of one or both protein binding partners. For example, the methods disclosed herein may be useful for epitope and paratope mapping of an antibody-antigen pair, which is useful for the discovery and development of novel therapies, vaccines, diagnostics, among other biomedical applications.
    Type: Grant
    Filed: December 16, 2021
    Date of Patent: October 18, 2022
    Assignee: A-Alpha Bio, Inc. et al
    Inventors: David Younger, David Colby, Randolph Lopez, Michael Wittekind
  • Publication number: 20220251543
    Abstract: Characterization of the binding dynamics at the interface between any two proteins that specifically interact plays a role in myriad biomedical applications. The methods disclosed herein provide for the high-throughput characterization of the specific interaction at the interface between two protein binding partners and the identification of functionally significant mutations of one or both protein binding partners. For example, the methods disclosed herein may be useful for epitope and paratope mapping of an antibody-antigen pair, which is useful for the discovery and development of novel therapies, vaccines, diagnostics, among other biomedical applications.
    Type: Application
    Filed: June 1, 2021
    Publication date: August 11, 2022
    Inventors: David Younger, David Colby, Randolph Lopez, Michael Wittekind
  • Publication number: 20220107326
    Abstract: Characterization of the binding dynamics at the interface between any two proteins that specifically interact plays a role in myriad biomedical applications. The methods disclosed herein provide for the high-throughput characterization of the specific interaction at the interface between two protein binding partners and the identification of functionally significant mutations of one or both protein binding partners. For example, the methods disclosed herein may be useful for epitope and paratope mapping of an antibody-antigen pair, which is useful for the discovery and development of novel therapies, vaccines, diagnostics, among other biomedical applications.
    Type: Application
    Filed: December 16, 2021
    Publication date: April 7, 2022
    Inventors: David Younger, David Colby, Randolph Lopez, Michael Wittekind
  • Patent number: 11238879
    Abstract: An acoustic delay measurement apparatus measures an audio delay introduced by an audio system. A programmable delay buffer, which introduces a programmable delay into the audio stream, receives an audio stream from an audio source and outputs a reference signal representing the audio stream. An adaptive filter is responsive to the reference signal to generate an estimate signal to match on convergence of the adaptive filter an audio signal output by the audio system, which is the audio stream delayed by an amount representative of the audio delay introduced by the audio system. A processor including a coefficient analysis block reads coefficients in the adaptive filter after convergence, computes a delay introduced into said estimate signal by the adaptive filter, and adds the computed delay to the programmable delay buffer to provide a measurement of the audio delay.
    Type: Grant
    Filed: October 31, 2018
    Date of Patent: February 1, 2022
    Assignee: Microsemi Semiconductor (U.S.) Inc.
    Inventors: Siddharth Raghunandan, David Colby, Dean Morgan
  • Publication number: 20190130929
    Abstract: An acoustic delay measurement apparatus measures an audio delay introduced by an audio system. A programmable delay buffer, which introduces a programmable delay into the audio stream, receives an audio stream from an audio source and outputs a reference signal representing the audio stream. An adaptive filter is responsive to the reference signal to generate an estimate signal to match on convergence of the adaptive filter an audio signal output by the audio system, which is the audio stream delayed by an amount representative of the audio delay introduced by the audio system. A processor including a coefficient analysis block reads coefficients in the adaptive filter after convergence, computes a delay introduced into said estimate signal by the adaptive filter, and adds the computed delay to the programmable delay buffer to provide a measurement of the audio delay.
    Type: Application
    Filed: October 31, 2018
    Publication date: May 2, 2019
    Applicant: Microsemi Semiconductor (U.S.) Inc.
    Inventors: Siddharth Raghunandan, David Colby, Dean Morgan
  • Patent number: 9968888
    Abstract: The present invention is directed to a method of sealing the free end of a hollow fiber membrane for use in a single header filtration module by dipping the end of the membrane into a low-viscosity light-curable adhesive and curing the adhesive. The invention further encompasses the resulting sealed hollow fiber membrane with a diameter that is only slightly larger than the diameter of the unsealed membrane.
    Type: Grant
    Filed: September 30, 2016
    Date of Patent: May 15, 2018
    Assignee: Koch Membrane Systems, Inc.
    Inventors: Taylour Johnson, David Colby
  • Publication number: 20170014775
    Abstract: The present invention is directed to a method of sealing the free end of a hollow fiber membrane for use in a single header filtration module by dipping the end of the membrane into a low-viscosity light-curable adhesive and curing the adhesive. The invention further encompasses the resulting sealed hollow fiber membrane with a diameter that is only slightly larger than the diameter of the unsealed membrane.
    Type: Application
    Filed: September 30, 2016
    Publication date: January 19, 2017
    Applicant: Koch Membrane Systems, Inc.
    Inventors: Taylour Johnson, David Colby
  • Patent number: 9498753
    Abstract: The present invention is directed to a method of sealing the free end of a hollow fiber membrane for use in a single header filtration module by dipping the end of the membrane into a low-viscosity light-curable adhesive and curing the adhesive. The invention further encompasses the resulting sealed hollow fiber membrane with a diameter that is only slightly larger than the diameter of the unsealed membrane.
    Type: Grant
    Filed: March 15, 2012
    Date of Patent: November 22, 2016
    Assignee: Koch Membrane Systems, Inc.
    Inventors: Taylour Johnson, David Colby
  • Patent number: 9124415
    Abstract: A clock generator with glitchless phase adjustment having a phase locked loop with a controlled oscillator providing an output representing a phase value. One or more output modules generate one or more output clocks from the output. One or more adjustment modules add a requested phase adjustment to an output clock. The phase adjustment modules are configured to break the requested phase adjustment into smaller increments and apply the increments to an output clock generated in said at the output modules one cycle at a time.
    Type: Grant
    Filed: January 14, 2015
    Date of Patent: September 1, 2015
    Assignee: Microsemi Semiconductor ULC
    Inventors: David Colby, Joep De Rijk, Paul H. L. M. Schram, Tanmay Zargar
  • Patent number: 9094185
    Abstract: A digital phase locked loop has a phase acquisition module that outputs a first phase value representative of the phase of a reference signal expressed with respect to an internal phase reference. A phase offset write module convert a phases offset commanded from an external source into a phase offset correction value expressed with respect to the internal phase reference. A phase offset controller sums the phase offset correction values to produce a second phase value, which is added to the first phase value to produce a third phase value expressed with respect to the internal phase reference. A digital controlled oscillator (DCO) outputs a fourth phase value expressed with respect to the internal phase reference. A phase detector outputs a fifth phase value representing the difference between the third and fourth phase values. A loop filter derives a frequency offset for the DCO based on the fifth phase value. An output module generates one or more output clocks from the fourth phase value.
    Type: Grant
    Filed: January 14, 2015
    Date of Patent: July 28, 2015
    Assignee: MICROSEMI SEMICONDUCTOR ULC
    Inventors: Paul H. L. M. Schram, Krste Mitric, Slobodan Milijevic, Tanmay Zargar, David Colby
  • Publication number: 20150207619
    Abstract: A digital phase locked loop has a phase acquisition module that outputs a first phase value representative of the phase of a reference signal expressed with respect to an internal phase reference. A phase offset write module convert a phases offset commanded from an external source into a phase offset correction value expressed with respect to the internal phase reference. A phase offset controller sums the phase offset correction values to produce a second phase value, which is added to the first phase value to produce a third phase value expressed with respect to the internal phase reference. A digital controlled oscillator (DCO) outputs a fourth phase value expressed with respect to the internal phase reference. A phase detector outputs a fifth phase value representing the difference between the third and fourth phase values. A loop filter derives a frequency offset for the DCO based on the fifth phase value. An output module generates one or more output clocks from the fourth phase value.
    Type: Application
    Filed: January 14, 2015
    Publication date: July 23, 2015
    Inventors: Paul H.L.M. SCHRAM, Krste MITRIC, Slobodan MILIJEVIC, Tanmay ZARGAR, David COLBY
  • Publication number: 20150207620
    Abstract: A clock generator with glitchless phase adjustment having a phase locked loop with a controlled oscillator providing an output representing a phase value. One or more output modules generate one or more output clocks from the output. One or more adjustment modules add a requested phase adjustment to an output clock. The phase adjustment modules are configured to break the requested phase adjustment into smaller increments and apply the increments to an output clock generated in said at the output modules one cycle at a time.
    Type: Application
    Filed: January 14, 2015
    Publication date: July 23, 2015
    Inventors: David COLBY, Joep De RIJK, Paul H.L.M. SCHRAM, Tanmay ZARGAR
  • Patent number: 8907706
    Abstract: A phase-locked loop to is simultaneously synchronized to high and low frequency clocks by (i) locking an output of the phase-locked loop to a high-frequency reference clock, (ii) measuring at a high rate a first phase difference between the high-frequency reference clock and the output of the phase-locked loop, (iii) measuring at a high rate a second phase difference between a low-frequency reference clock and the output of the phase-locked loop; (iv) computing at a low rate from said first and second phase differences a third phase difference between the high-frequency and low frequency clocks; (v) combining at a low rate said third phase difference with said second phase-difference to obtain a total phase difference; and (vi) adjusting the output of the phase-locked loop at a low rate to reduce the obtained total phase difference.
    Type: Grant
    Filed: April 28, 2014
    Date of Patent: December 9, 2014
    Assignee: Microsemi Semiconductor ULC
    Inventors: Krste Mitric, Paul Schram, Tanmay Zargar, David Colby, Cathy Zhang, Robertus van der Valk
  • Publication number: 20140320181
    Abstract: A phase-locked loop to is simultaneously synchronized to high and low frequency clocks by (i) locking an output of the phase-locked loop to a high-frequency reference clock, (ii) measuring at a high rate a first phase difference between the high-frequency reference clock and the output of the phase-locked loop, (iii) measuring at a high rate a second phase difference between a low-frequency reference clock and the output of the phase-locked loop; (iv) computing at a low rate from said first and second phase differences a third phase difference between the high-frequency and low frequency clocks; (v) combining at a low rate said third phase difference with said second phase-difference to obtain a total phase difference; and (vi) adjusting the output of the phase-locked loop at a low rate to reduce the obtained total phase difference.
    Type: Application
    Filed: April 28, 2014
    Publication date: October 30, 2014
    Applicant: Microsemi Semiconductor ULC
    Inventors: Krste Mitric, Paul Schram, Tanmay Zargar, David Colby, Cathy Zhang, Robertus Van der Valk
  • Publication number: 20130240436
    Abstract: The present invention is directed to a method of sealing the free end of a hollow fiber membrane for use in a single header filtration module by dipping the end of the membrane into a low-viscosity light-curable adhesive and curing the adhesive. The invention further encompasses the resulting sealed hollow fiber membrane with a diameter that is only slightly larger than the diameter of the unsealed membrane.
    Type: Application
    Filed: March 15, 2012
    Publication date: September 19, 2013
    Inventors: Taylour Johnson, David Colby
  • Publication number: 20110233126
    Abstract: A reverse osmosis pressure vessel end cap assembly includes a seal plate positioned within a pressure vessel shell, with one or more load plates positioned to retain the seal plate in position. A load ring is captured or expanded by the load plates to secure the load ring into a channel in the interior surface of the pressure vessel shell. The end cap assembly thus provides secure yet easily removable access to the pressure vessel, capable of withstanding the high pressures of a reverse osmosis filtration system. Various exemplary embodiments of the assembly are provided.
    Type: Application
    Filed: March 25, 2010
    Publication date: September 29, 2011
    Inventors: Warren C. Prouty, Mark C. Farrell, David Colby, Abdullatif Zaouk, Basant Kumar Parida, James Carter, Norman Dana, Xudong Xin