Patents by Inventor David Dodd

David Dodd has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20200232017
    Abstract: Compositions useful for the detection of single molecules in a sample are provided. In some aspects, the disclosure provides a nucleotide connected to a nucleic acid comprising a FRET label comprising at least three luminescent molecules. In some embodiments, the nucleic acids described herein comprise one or more structural features that provide enhanced fluorescence intensity. In some aspects, methods of sequencing using the labeled nucleotides of the disclosure are provided.
    Type: Application
    Filed: January 23, 2020
    Publication date: July 23, 2020
    Inventors: Jonathan M. Rothberg, Jeremy Lackey, Brian Reed, Xinghua Shi, Haidong Huang, David Dodd
  • Publication number: 20200219590
    Abstract: Aspects of the application provide methods of identifying and sequencing proteins, polypeptides, and amino acids, and compositions useful for the same. In some aspects, the application provides methods of obtaining data during a degradation process of a polypeptide, and outputting a sequence representative of the polypeptide. In some aspects, the application provides amino acid recognition molecules comprising a shielding element that enhances photostability in polypeptide sequencing reactions.
    Type: Application
    Filed: November 15, 2019
    Publication date: July 9, 2020
    Applicant: Quantum-Si Incorporated
    Inventors: Brian Reed, Jeremy Lackey, Thomas Christian, Roger Nani, David Dodd, Kathren Croce, Alexander Goryaynov, Jonathan M. Rothberg
  • Publication number: 20200209249
    Abstract: Aspects of the application provide methods of identifying and sequencing proteins, polypeptides, and amino acids, and compositions useful for the same. In some aspects, the application provides methods of obtaining data during a degradation process of a polypeptide, and outputting a sequence representative of the polypeptide. In some aspects, the application provides amino acid recognition molecules comprising a shielding element that enhances photostability in polypeptide sequencing reactions.
    Type: Application
    Filed: December 10, 2019
    Publication date: July 2, 2020
    Applicant: Quantum-Si Incorporated
    Inventors: Brian Reed, Jeremy Lackey, Thomas Christian, Roger Nani, David Dodd, Kathren Croce, Alexander Goryaynov, Jonathan M. Rothberg
  • Publication number: 20200209256
    Abstract: Aspects of the application provide methods of identifying and sequencing proteins, polypeptides, and amino acids, and compositions useful for the same. In some aspects, the application provides methods of obtaining data during a degradation process of a polypeptide, and outputting a sequence representative of the polypeptide. In some aspects, the application provides amino acid recognition molecules comprising a shielding element that enhances photostability in polypeptide sequencing reactions.
    Type: Application
    Filed: December 10, 2019
    Publication date: July 2, 2020
    Applicant: Quantum-Si Incorporated
    Inventors: Brian Reed, Jeremy Lackey, Thomas Christian, Roger Nani, David Dodd, Kathren Croce, Alexander Goryaynov, Jonathan M. Rothberg
  • Publication number: 20200209255
    Abstract: Aspects of the application provide methods of identifying and sequencing proteins, polypeptides, and amino acids, and compositions useful for the same. In some aspects, the application provides methods of obtaining data during a degradation process of a polypeptide, and outputting a sequence representative of the polypeptide. In some aspects, the application provides amino acid recognition molecules comprising a shielding element that enhances photostability in polypeptide sequencing reactions.
    Type: Application
    Filed: December 10, 2019
    Publication date: July 2, 2020
    Applicant: Quantum-Si Incorporated
    Inventors: Brian Reed, Jeremy Lackey, Thomas Christian, Roger Nani, David Dodd, Kathren Croce, Alexander Goryaynov, Jonathan M. Rothberg
  • Publication number: 20200209253
    Abstract: Aspects of the application provide methods of identifying and sequencing proteins, polypeptides, and amino acids, and compositions useful for the same. In some aspects, the application provides methods of obtaining data during a degradation process of a polypeptide, and outputting a sequence representative of the polypeptide. In some aspects, the application provides amino acid recognition molecules comprising a shielding element that enhances photostability in polypeptide sequencing reactions.
    Type: Application
    Filed: December 10, 2019
    Publication date: July 2, 2020
    Applicant: Quantum-Si Incorporated
    Inventors: Brian Reed, Jeremy Lackey, Thomas Christian, Roger Nani, David Dodd, Kathren Croce, Alexander Goryaynov, Jonathan M. Rothberg
  • Publication number: 20200209254
    Abstract: Aspects of the application provide methods of identifying and sequencing proteins, polypeptides, and amino acids, and compositions useful for the same. In some aspects, the application provides methods of obtaining data during a degradation process of a polypeptide, and outputting a sequence representative of the polypeptide. In some aspects, the application provides amino acid recognition molecules comprising a shielding element that enhances photostability in polypeptide sequencing reactions.
    Type: Application
    Filed: December 10, 2019
    Publication date: July 2, 2020
    Applicant: Quantum-Si Incorporated
    Inventors: Brian Reed, Jeremy Lackey, Thomas Christian, Roger Nani, David Dodd, Kathren Croce, Alexander Goryaynov, Jonathan M. Rothberg
  • Publication number: 20200209257
    Abstract: Aspects of the application provide methods of identifying and sequencing proteins, polypeptides, and amino acids, and compositions useful for the same. In some aspects, the application provides methods of obtaining data during a degradation process of a polypeptide, and outputting a sequence representative of the polypeptide. In some aspects, the application provides amino acid recognition molecules comprising a shielding element that enhances photostability in polypeptide sequencing reactions.
    Type: Application
    Filed: December 10, 2019
    Publication date: July 2, 2020
    Applicant: Quantum-Si Incorporated
    Inventors: Brian Reed, Jeremy Lackey, Thomas Christian, Roger Nani, David Dodd, Kathren Croce, Alexander Goryaynov, Jonathan M. Rothberg
  • Publication number: 20200031861
    Abstract: Aspects of the disclosure provide biconjugatable labels, labeled biomolecules, and methods of using and making the same.
    Type: Application
    Filed: July 12, 2019
    Publication date: January 30, 2020
    Applicant: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Jeremy Lackey, Roger Nani, David Dodd
  • Publication number: 20190024168
    Abstract: Compositions useful for the detection of single molecules in a sample are provided. In some aspects, the disclosure provides a nucleic acid connected to a nucleotide and two or more luminescent labels. In some embodiments, the nucleic acids described herein comprise one or more structural features that provide enhanced fluorescence intensity. In some aspects, methods of sequencing using the labeled nucleotides of the disclosure are provided.
    Type: Application
    Filed: July 24, 2018
    Publication date: January 24, 2019
    Applicant: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Jeremy Lackey, Brian Reed, Xinghua Shi, Haidong Huang, David Dodd
  • Publication number: 20190014443
    Abstract: A building occupant tracker for tracking the location of an occupant in a building by tracking a smart device associated with the occupant at a location server.
    Type: Application
    Filed: July 18, 2016
    Publication date: January 10, 2019
    Inventor: David Dodd Miller
  • Patent number: 10019898
    Abstract: A connected traffic monitoring system comprises at least one Roadside Unit (RSU) and a traffic signal controller. The roadside unit is configured to transmit wireless signals, receive corresponding responses from a first Onboard Unit (OBU)-equipped vehicle and a second OBU-equipped vehicle and send data from the first OBU-equipped vehicle and the second OBU-equipped vehicle to the traffic signal controller. The traffic signal controller to calculate a distance between the first Onboard Unit (OBU)-equipped vehicle and the second OBU-equipped vehicle in a vehicle queue associated with a traffic light signal on an intersection, determine the queue length of the vehicle queue, determine whether the distance between the first OBU-equipped vehicle and the second OBU-equipped vehicle is greater than a vehicle length and if the distance is determined greater than the vehicle length, detect at least one non-OBU-equipped vehicle stopped in the vehicle queue behind the first OBU-equipped vehicle.
    Type: Grant
    Filed: April 5, 2016
    Date of Patent: July 10, 2018
    Assignee: SIEMENS INDUSTRY, INC.
    Inventor: David Dodd Miller
  • Publication number: 20170362651
    Abstract: Methods of sequencing molecules based on luminescence lifetimes and/or intensities are provided. In some aspects, methods of sequencing nucleic acids involve determining the luminescence lifetimes, and optionally luminescence intensities, of a series of luminescently labeled nucleotides incorporated during a nucleic acid sequencing reaction. In some aspects, the disclosure provides compositions comprising luminescently labeled nucleotides.
    Type: Application
    Filed: May 22, 2017
    Publication date: December 21, 2017
    Applicant: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Jeremy Lackey, Brian Reed, Xinghua Shi, Haidong Huang, David Dodd
  • Publication number: 20170206783
    Abstract: A connected traffic monitoring system comprises at least one Roadside Unit (RSU) and a traffic signal controller. The roadside unit is configured to transmit wireless signals, receive corresponding responses from a first Onboard Unit (OBU)-equipped vehicle and a second OBU-equipped vehicle and send data from the first OBU-equipped vehicle and the second OBU-equipped vehicle to the traffic signal controller. The traffic signal controller to calculate a distance between the first Onboard Unit (OBU)-equipped vehicle and the second OBU-equipped vehicle in a vehicle queue associated with a traffic light signal on an intersection, determine the queue length of the vehicle queue, determine whether the distance between the first OBU-equipped vehicle and the second OBU-equipped vehicle is greater than a vehicle length and if the distance is determined greater than the vehicle length, detect at least one non-OBU-equipped vehicle stopped in the vehicle queue behind the first OBU-equipped vehicle.
    Type: Application
    Filed: April 5, 2016
    Publication date: July 20, 2017
    Inventor: David Dodd Miller
  • Patent number: 9646496
    Abstract: A connected traffic safety system comprises at least one roadside unit and a vehicle detection device. The roadside unit is configured to transmit wireless signals and receive corresponding responses from a corresponding wireless device of an Onboard Unit (OBU)-equipped vehicle, and to send at least one of vehicle location data, direction heading data, elevation data and speed data from the OBU-equipped vehicle to a traffic signal controller. The vehicle detection device is configured to generate vehicle detection data of at least one non-Onboard Unit (OBU)-equipped vehicle. The roadside unit to receive the vehicle detection data for creating a proxy data wireless message for the non-Onboard Unit (OBU)-equipped vehicle. The roadside unit to mimic the proxy data wireless message as a first Basic Safety Message (BSM) for the non-Onboard Unit (OBU)-equipped vehicle that would have been available to the Onboard Unit (OBU)-equipped vehicle present nearby.
    Type: Grant
    Filed: April 5, 2016
    Date of Patent: May 9, 2017
    Assignee: SIEMENS INDUSTRY, INC.
    Inventor: David Dodd Miller
  • Patent number: 9334618
    Abstract: A field tile float is slidably mounted on a trash guard to prevent crop residue trash from clogging the drain inlet of field tile. The float includes a buoyant body extending around the trash guard cage and a guide frame slidably mounted on the trash guard post. When surface water in the field rises, the float is lifted to allow water to flow beneath the float into the drain pipe, while the buoyant body blocks field trash from clogging the trash guard.
    Type: Grant
    Filed: January 30, 2014
    Date of Patent: May 10, 2016
    Inventor: Jason David Dodd
  • Publication number: 20160102196
    Abstract: A corrugated plastic sheet is provided having two outer sheets and internal ribs. The ratio of the thicknesses between each outer sheet and a rib is approximately 2:1. This ratio can be adjusted so that the upper and lower sheets are thicker than the thickness of the ribs. The die itself does not need to be changed. Rather, the die settings are merely adjusted.
    Type: Application
    Filed: September 25, 2015
    Publication date: April 14, 2016
    Inventor: David Dodd
  • Patent number: 9280897
    Abstract: Embodiments include an emergency traffic management system includes a traffic management center configured to receive traffic information, a traffic signal controller in communication with the traffic management center, and roadside equipment in communication with the traffic signal controller. The roadside equipment includes a transceiver configured to communicate with one or more mobile devices via a wireless communications channel, a memory device configured to store emergency information, a processor configured to provide the emergency information to the one or more mobile devices via the transceiver, and a power supply configured to provide power to the processor and the transceiver.
    Type: Grant
    Filed: July 9, 2014
    Date of Patent: March 8, 2016
    Assignee: SIEMENS INDUSTRY, INC.
    Inventor: David Dodd Miller
  • Patent number: 9013325
    Abstract: A roadside equipment (RSE) system that can be used for controlling traffic signals and other equipment and corresponding method. A method includes maintaining a traffic signal in a GREEN phase in a first direction, including displaying a GREEN indicator in the first direction. The method includes detecting an event indicating that the phase of the traffic signal in the first direction should be changed and changing the phase of the traffic signal to a pre-YELLOW phase in response to the detected event, including continuing to display the GREEN indicator in the first direction. The method includes wirelessly transmitting a message indicating the pre-YELLOW phase and a phase time, the phase time indicating a next change of phase of the traffic signal, and changing the phase of the traffic signal to a YELLOW phase when the phase time has been reached.
    Type: Grant
    Filed: August 2, 2010
    Date of Patent: April 21, 2015
    Assignee: Siemens Industry, Inc.
    Inventors: David Dodd Miller, Mark Allen Clark
  • Patent number: 9015704
    Abstract: A computer implemented method, apparatus, and computer usable program code for executing a process within a virtual machine. A module is injected into an operating system for the virtual machine to form an injected module. The injected module is executed to load an agent process within an application space within the virtual machine. Execution of the agent process is initiated by the injected module.
    Type: Grant
    Filed: March 24, 2008
    Date of Patent: April 21, 2015
    Assignee: International Business Machines Corporation
    Inventors: Marshall Thomas Vandegrift, Kevin Michael Skapinetz, Timothy David Dodd