Patents by Inventor Jason Harris

Jason Harris has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11456058
    Abstract: A computer-implemented method for processing and/or analyzing nucleic acid sequencing data comprises receiving a first data input and a second data input. The first data input comprises untargeted sequencing data generated from a first nucleic acid sample obtained from a subject. The second data input comprises target-specific sequencing data generated from a second nucleic acid sample obtained from the subject. Next, with the aid of a computer processor, the first data input and the second data input are combined to produce a combined data set. Next, an output derived from the combined data set is generated. The output is indicative of the presence or absence of one or more polymorphisms of the first nucleic acid sample and/or the second nucleic acid sample.
    Type: Grant
    Filed: May 17, 2022
    Date of Patent: September 27, 2022
    Assignee: Personalis, Inc.
    Inventors: Jason Harris, Mark R. Pratt, John West, Richard Chen, Ming Li
  • Publication number: 20220284984
    Abstract: Methods for somatic variant calling from an unmatched biological samples is provided. The method can include obtaining nucleic acid sequence data corresponding to a biological sample of a subject. The method can also include aligning the nucleic acid sequence data to a reference genome. The method can also include identifying, based on the aligned nucleic acid sequence data, a set of candidate variants in said nucleic acid sequence data. The set of candidate variants may include one or more somatic variants and one or more germline variants. The method can also include, without using a nucleic acid sequencing data from a matching biological sample of the subject, processing the set of candidate variants using a trained machine-learning model to identify the somatic variants. The method can also include outputting a report that identifies the somatic variants.
    Type: Application
    Filed: May 3, 2022
    Publication date: September 8, 2022
    Applicant: Personalis, Inc.
    Inventors: Patrick Jongeneel, Nicholas Phillips, Jason Harris
  • Publication number: 20220277810
    Abstract: A computer-implemented method for processing and/or analyzing nucleic acid sequencing data comprises receiving a first data input and a second data input. The first data input comprises untargeted sequencing data generated from a first nucleic acid sample obtained from a subject. The second data input comprises target-specific sequencing data generated from a second nucleic acid sample obtained from the subject. Next, with the aid of a computer processor, the first data input and the second data input are combined to produce a combined data set. Next, an output derived from the combined data set is generated. The output is indicative of the presence or absence of one or more polymorphisms of the first nucleic acid sample and/or the second nucleic acid sample.
    Type: Application
    Filed: May 17, 2022
    Publication date: September 1, 2022
    Inventors: Jason Harris, Mark R. Pratt, John West, Richard Chen, Ming Li
  • Publication number: 20220259678
    Abstract: The disclosure provides methods for estimating tumor purity from tumor samples without use of matched-normal controls. A set of genomic regions are identified based on a nucleic acid sequence data that is aligned to a reference genome. Each genomic region of the set of genomic regions includes one or more nucleotide-sequence variants relative to a corresponding genomic region of the reference genome. A B-allele frequency distribution for the biological sample is determined based on a B-allele frequency determined for each genomic region of the set of genomic regions. The B-allele frequency distribution is processed using a trained machine-learning model to estimate a metric identifying tumor purity in the biological sample.
    Type: Application
    Filed: May 3, 2022
    Publication date: August 18, 2022
    Applicant: Personalis, Inc.
    Inventors: Nicholas PHILLIPS, Jason HARRIS
  • Publication number: 20220259170
    Abstract: Described herein are NLRP3 modulators and methods of utilizing NLRP3 modulators in the treatment of diseases, disorders or conditions. Also described herein are pharmaceutical compositions containing such compounds.
    Type: Application
    Filed: July 16, 2020
    Publication date: August 18, 2022
    Inventors: Raju MOHAN, John NUSS, Jason HARRIS, Shendong YUAN
  • Patent number: 11409581
    Abstract: One or more computing devices, systems, and/or methods are provided. Event information associated with a plurality of events may be identified. The plurality of events may be associated with first entities corresponding to a first entity type and second entities associated with a second entity type. A first network profile associated with the first entities and the second entities may be generated based upon the event information. First representations associated with the first entities and second representations associated with the second entities may be generated based upon the first network profile. Clusters in the first representations and/or the second representations may be identified. One or more coalition networks associated with fraudulent activity may be identified based upon the clusters.
    Type: Grant
    Filed: April 10, 2020
    Date of Patent: August 9, 2022
    Assignee: YAHOO ASSETS LLC
    Inventors: Ruichen Wang, Timothy Michael Olson, Yan Han, Jian Tian, Robert Jason Harris, Shaima Abdul Majeed
  • Publication number: 20220227767
    Abstract: Described herein are heterocyclic compounds, compositions, and methods for their use for the treatment of disease.
    Type: Application
    Filed: March 18, 2022
    Publication date: July 21, 2022
    Inventors: Raju MOHAN, John NUSS, Jason HARRIS
  • Publication number: 20220197664
    Abstract: Systems and methods are provided for efficiently performing processing intensive operations, such as those involving large volumes of data, that enable accelerated processing time of these operations. In at least one embodiment, a system includes a graphics processor unit (GPU) including a memory and a plurality of cores. The plurality of cores perform a plurality of data analytics operations on a respectively allocated portion of a dataset, each of the plurality of cores using only the memory to store data input for each of the plurality of data analytics operations performed by the plurality of cores. The data storage for the plurality of data analytics operations performed by the plurality of cores is also provided solely by the memory.
    Type: Application
    Filed: March 11, 2022
    Publication date: June 23, 2022
    Inventors: Joshua Patterson, Leeann Chau Tuyet Dang, Keith Jason Kraus, Allan Rabbitt Enemark, Frank Joseph Eaton, Bradley Stuart Rees, Michael Evan Wendt, Mark Jason Harris
  • Patent number: 11364679
    Abstract: A system for use in additively manufacturing an object. The system includes a powder bed configured for containment within a build chamber, wherein the powder bed is formed from a mixture of a build material and a bonding agent. The system also includes a heat source configured to selectively heat the powder bed to a temperature such that the build material is at least partially sintered together by the bonding agent. The heat source also selectively heats the powder bed to the temperature that maintains the build material in a solid state.
    Type: Grant
    Filed: November 1, 2019
    Date of Patent: June 21, 2022
    Assignee: General Electric Company
    Inventors: Scott Michael Oppenheimer, Richard DiDomizio, Jason Harris Karp
  • Publication number: 20220175765
    Abstract: Described herein are retinoic acid related-related orphan nuclear receptor (ROR) modulators and methods of utilizing ROR? modulators in the treatment of dermal diseases, disorders or conditions. Also described herein are pharmaceutical compositions containing such compounds.
    Type: Application
    Filed: February 15, 2022
    Publication date: June 9, 2022
    Inventors: Raju MOHAN, John NUSS, Jason HARRIS
  • Publication number: 20220169651
    Abstract: Described herein are TYK2 pseudokinase ligands and methods of utilizing TYK2 pseudokinase ligands in the treatment of diseases, disorders or conditions. Also described herein are pharmaceutical compositions containing such compounds.
    Type: Application
    Filed: March 25, 2020
    Publication date: June 2, 2022
    Inventors: Raju MOHAN, John NUSS, Jason HARRIS, Shendong YUAN
  • Publication number: 20220135567
    Abstract: Described herein are TYK2 pseudokinase ligands and methods of utilizing TYK2 pseudokinase ligands in the treatment of diseases, disorders or conditions. Also described herein are pharmaceutical compositions containing such compounds.
    Type: Application
    Filed: February 7, 2020
    Publication date: May 5, 2022
    Inventors: Raju MOHAN, John NUSS, Jason HARRIS, Shendong YUAN
  • Patent number: 11307863
    Abstract: Systems and methods are provided for efficiently performing processing intensive operations, such as those involving large volumes of data, that enable accelerated processing time of these operations. In at least one embodiment, a system includes a graphics processor unit (GPU) including a memory and a plurality of cores. The plurality of cores perform a plurality of data analytics operations on a respectively allocated portion of a dataset, each of the plurality of cores using only the memory to store data input for each of the plurality of data analytics operations performed by the plurality of cores. The data storage for the plurality of data analytics operations performed by the plurality of cores is also provided solely by the memory.
    Type: Grant
    Filed: October 8, 2019
    Date of Patent: April 19, 2022
    Assignee: NVIDIA Corporation
    Inventors: Joshua Patterson, Leeann Chau Tuyet Dang, Keith Jason Kraus, Allan Rabbitt Enemark, Frank Joseph Eaton, Bradley Stuart Rees, Michael Evan Wendt, Mark Jason Harris
  • Publication number: 20220116235
    Abstract: Embodiments are generally directed to managing power consumption of powered devices. In some embodiments, the powered devices draw power from a common source of power, which is limited. Under certain circumstances, exceeding the power limits can cause interruption of power to one or more of the devices, thus introducing a source of communication failures. To ensure reliable communications, an attempt to increase a power consumption of a first powered device in a power group is first reviewed to determine if the increase will cause a supplied power of the group to exceed a maximum power of the group. If the increase will cause the maximum power to be exceeded, the increase is modified, in some circumstances, to fit within the maximum power level. Alternatively, power consumption of a lower priority device is reduced to accommodate the requested power consumption increase.
    Type: Application
    Filed: October 14, 2020
    Publication date: April 14, 2022
    Inventors: Oscar Ernohazy, Joshua Rosenthal, Jason Harris, John James Musante, Shmuel Shaffer
  • Publication number: 20220106323
    Abstract: Described herein are retinoic acid related-related orphan nuclear receptor (ROR) modulators and methods of utilizing ROR-gamma modulators in the treatment of diseases, disorders or conditions. Also described herein are pharmaceutical compositions containing such compounds.
    Type: Application
    Filed: December 15, 2021
    Publication date: April 7, 2022
    Inventors: Raju MOHAN, John NUSS, Jason HARRIS, Shendong YUAN
  • Publication number: 20220106329
    Abstract: Described herein are retinoic acid related-related orphan nuclear receptor (ROR) modulators and methods of utilizing ROR-gamma modulators in the treatment of diseases, disorders or conditions. Also described herein are pharmaceutical compositions containing such compounds.
    Type: Application
    Filed: December 14, 2021
    Publication date: April 7, 2022
    Inventors: Raju MOHAN, John NUSS, Jason HARRIS, Shendong YUAN
  • Patent number: 11287408
    Abstract: A gas detector sensor node includes a first sensor conductor having a terminal end, a second sensor conductor including an end section, and a coupler joining the terminal end of the first sensor conductor with the end section of the second sensor conductor. The coupler is permeable to gas.
    Type: Grant
    Filed: April 30, 2019
    Date of Patent: March 29, 2022
    Assignee: BAKER HUGHES, A GE COMPANY, LLC
    Inventors: Jason Harris Karp, William Albert Challener
  • Patent number: 11242350
    Abstract: Described herein are retinoic acid related-related orphan nuclear receptor (ROR) modulators and methods of utilizing ROR-gamma modulators in the treatment of diseases, disorders or conditions. Also described herein are pharmaceutical compositions containing such compounds.
    Type: Grant
    Filed: March 11, 2019
    Date of Patent: February 8, 2022
    Assignee: ESCALIER BIOSCIENCES B.V.
    Inventors: Raju Mohan, John Nuss, Jason Harris, Shendong Yuan
  • Patent number: 11230555
    Abstract: Described herein are retinoic acid related-related orphan nuclear receptor (ROR) modulators and methods of utilizing ROR-gamma modulators in the treatment of diseases, disorders or conditions. Also described herein are pharmaceutical compositions containing such compounds.
    Type: Grant
    Filed: March 11, 2019
    Date of Patent: January 25, 2022
    Assignee: ESCALIER BIOSCIENCES B.V.
    Inventors: Raju Mohan, John Nuss, Jason Harris, Shendong Yuan
  • Publication number: 20210370448
    Abstract: A method of forming a build in a powder bed includes providing a first diode laser fiber array and a second diode laser fiber array, emitting a plurality of laser beams from selected fibers of the second diode laser fiber array onto the powder bed, corresponding to a pattern of a layer of the build, simultaneously melting powder in the powder bed corresponding to the pattern of the layer of the build, scanning a first diode laser fiber array along an outer boundary of the powder bed and emitting a plurality of laser beams from selected fibers of the first diode laser fiber array and simultaneously melting powder in the powder bed corresponding to the outer boundary of the layer of the build to contour the layer of the build. An apparatus for forming a build in a powder bed including a first diode laser fiber array and a second diode laser fiber array is also disclosed. The first diode laser fiber array configured to contour the layer of the build.
    Type: Application
    Filed: August 9, 2021
    Publication date: December 2, 2021
    Inventors: David Charles Bogdan, JR., Jason Harris Karp, William Thomas Carter