Patents by Inventor Jonathan M. Rothberg

Jonathan M. Rothberg has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Patent number: 11397233
    Abstract: In some aspects, a magnetic system for use in a low-field MRI system. The magnetic system comprises at least one electromagnet configured to, when operated, generate a magnetic field to contribute to a B0 field for the low-field MRI system, and at least one permanent magnet to produce a magnetic field to contribute to the B0 field.
    Type: Grant
    Filed: January 31, 2019
    Date of Patent: July 26, 2022
    Assignee: Hyperfine Operations, Inc.
    Inventors: Michael Stephen Poole, Todd Rearick, Jonathan M. Rothberg
  • Publication number: 20220214279
    Abstract: Apparatus and methods for analyzing single molecule and performing nucleic acid sequencing. An apparatus can include an assay chip that includes multiple pixels with sample wells configured to receive a sample, which, when excited, emits emission energy; at least one element for directing the emission energy in a particular direction; and a light path along which the emission energy travels from the sample well toward a sensor. The apparatus also includes an instrument that interfaces with the assay chip. The instrument includes an excitation light source for exciting the sample in each sample well; a plurality of sensors corresponding the sample wells. Each sensor may detect emission energy from a sample in a respective sample well. The instrument includes at least one optical element that directs the emission energy from each sample well towards a respective sensor of the plurality of sensors.
    Type: Application
    Filed: March 25, 2022
    Publication date: July 7, 2022
    Applicant: Quantum-Si Incorporated
    Inventors: JONATHAN M. ROTHBERG, Ali Kabiri, Jason W. Sickler, Brett J. Gyarfas, Jeremy Lackey, Gerard Schmid, Benjamin Ciperiany, Jack Jewell, Lawrence C. West, Michael Ferrigno, Paul E. Glenn, Adam Ezra Cohen, Anthony Bellofiore
  • Publication number: 20220214417
    Abstract: A magnetic resonance imaging (MRI) system, comprising: a magnetics system comprising: a B0 magnet configured to provide a B0 field for the MRI system; gradient coils configured to provide gradient fields for the MRI system; and at least one RF coil configured. to detect magnetic resonance (MR) signals; and a controller configured to: control the magnetics system to acquire MR spatial frequency data using non-Cartesian sampling; and generate an MR image from the acquired MR spatial frequency data using a neural network model comprising one or more neural network blocks including a first neural network block, wherein the first neural network block is configured to perform data consistency processing using a non-uniform Fourier transformation.
    Type: Application
    Filed: March 23, 2022
    Publication date: July 7, 2022
    Applicant: Hyperfine Operations, Inc.
    Inventors: Jo Schlemper, Seyed Sadegh Mohseni Salehi, Michal Sofka, Prantik Kundu, Ziyi Wang, Carole Lazarus, Hadrien A. Dyvorne, Laura Sacolick, Rafael O'Halloran, Jonathan M. Rothberg
  • Patent number: 11375980
    Abstract: Aspects of the technology described herein relate to an ultrasound device including a first die that includes an ultrasonic transducer, a first application-specific integrated circuit (ASIC) that is bonded to the first die and includes a pulser, and a second ASIC in communication with the second ASIC that includes integrated digital receive circuitry. In some embodiments, the first ASIC may be bonded to the second ASIC and the second ASIC may include analog processing circuitry and an analog-to-digital converter. In such embodiments, the second ASIC may include a through-silicon via (TSV) facilitating communication between the first ASIC and the second ASIC. In some embodiments, SERDES circuitry facilitates communication between the first ASIC and the second ASIC and the first ASIC includes analog processing circuitry and an analog-to-digital converter. In some embodiments, the technology node of the first ASIC is different from the technology node of the second ASIC.
    Type: Grant
    Filed: May 6, 2019
    Date of Patent: July 5, 2022
    Assignee: BFLY Operations, Inc.
    Inventors: Kailiang Chen, Nevada J. Sanchez, Susan A. Alie, Tyler S. Ralston, Jonathan M. Rothberg, Keith G. Fife, Joseph Lutsky
  • Publication number: 20220209492
    Abstract: Apparatus and methods for producing ultrashort optical pulses are described. A high-power, solid-state, passively mode-locked laser can be manufactured in a compact module that can be incorporated into a portable instrument. The mode-locked laser can produce sub-50-ps optical pulses at a repetition rates between 200 MHz and 50 MHz, rates suitable for massively parallel data-acquisition. The optical pulses can be used to generate a reference clock signal for synchronizing data-acquisition and signal-processing electronics of the portable instrument.
    Type: Application
    Filed: March 16, 2022
    Publication date: June 30, 2022
    Applicant: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Jason W. Sickler, Lawrence C. West, Faisal R. Ahmad, Paul E. Glenn, Jack Jewell, John Glenn, Jose Camara, Jeremy Christopher Jordan, Todd Rearick, Farshid Ghasemi, Jonathan C. Schultz, Keith G. Fife, Benjamin Cipriany
  • Publication number: 20220192490
    Abstract: Aspects of the present disclosure provide improved techniques to assist imaging and/or measuring a subject's eye that are suitable for use in an imaging and/or measuring apparatus operated by the subject, even in the absence of a clinician or technician, thereby improving access to medical grade imaging and/or measurement. Some aspects relate to techniques for receiving user input and capturing a medical grade image and/or measurement of a subject's eye responsive to receiving the user input. Some aspects relate to techniques for providing visual feedback to a user of an imaging and/or measuring apparatus indicating a location of a subject's eye in a field of view of the imaging and/or measuring apparatus. Some aspects relate to techniques for selectively illuminating a first portion of a subject's eye with illumination light and capturing an image of the first portion of the subject's eye.
    Type: Application
    Filed: December 17, 2021
    Publication date: June 23, 2022
    Inventors: Tyler S. Ralston, Jonathan M. Rothberg, Maurizio Arienzo, Paul E. Glenn, Mark M. Meyers, Jacob Coumans, Edward A. DeHoog, John Glenn
  • Patent number: 11366188
    Abstract: According to some aspects, a portable magnetic resonance imaging system is provided, comprising a magnetics system having a plurality of magnetics components configured to produce magnetic fields for performing magnetic resonance imaging. The magnetics system comprises a permanent B0 magnet configured to produce a B0 field for the magnetic resonance imaging system, and a plurality of gradient coils configured to, when operated, generate magnetic fields to provide spatial encoding of emitted magnetic resonance signals, a power system comprising one or more power components configured to provide power to the magnetics system to operate the magnetic resonance imaging system to perform image acquisition, and a base that supports the magnetics system and houses the power system, the base comprising at least one conveyance mechanism allowing the portable magnetic resonance imaging system to be transported to different locations.
    Type: Grant
    Filed: July 8, 2020
    Date of Patent: June 21, 2022
    Assignee: Hyperfine Operations, Inc.
    Inventors: Michael Stephen Poole, Cedric Hugon, Hadrien A. Dyvorne, Laura Sacolick, William J. Mileski, Jeremy Christopher Jordan, Alan B. Katze, Jr., Jonathan M. Rothberg, Todd Rearick, Christopher Thomas McNulty
  • Patent number: 11351510
    Abstract: The present invention provides novel microfluidic substrates and methods that are useful for performing biological, chemical and diagnostic assays. The substrates can include a plurality of electrically addressable, channel bearing fluidic modules integrally arranged such that a continuous channel is provided for flow of immiscible fluids.
    Type: Grant
    Filed: June 1, 2018
    Date of Patent: June 7, 2022
    Assignee: Bio-Rad Laboratories, Inc.
    Inventors: Darren Roy Link, Michael Weiner, David Marran, Jonathan M. Rothberg
  • Publication number: 20220167945
    Abstract: Aspects of the technology described herein relate to techniques for guiding an operator to use an ultrasound device. Thereby, operators with little or no experience operating ultrasound devices may capture medically relevant ultrasound images and/or interpret the contents of the obtained ultrasound images. For example, some of the techniques disclosed herein may be used to identify a particular anatomical view of a subject to image with an ultrasound device, guide an operator of the ultrasound device to capture an ultrasound image of the subject that contains the particular anatomical view, and/or analyze the captured ultrasound image to identify medical information about the subject.
    Type: Application
    Filed: September 7, 2021
    Publication date: June 2, 2022
    Applicant: BFLY Operations, Inc.
    Inventors: Matthew de Jonge, Robert Schneider, David Elgena, Alex Rothberg, Jonathan M. Rothberg, Michal Sofka, Tomer Gafner, Karl Thiele, Abraham Neben
  • Publication number: 20220170861
    Abstract: Apparatus and methods for analyzing single molecule and performing nucleic acid sequencing. An apparatus can include an assay chip that includes multiple pixels with sample wells configured to receive a sample, which, when excited, emits emission energy; at least one element for directing the emission energy in a particular direction; and a light path along which the emission energy travels from the sample well toward a sensor. The apparatus also includes an instrument that interfaces with the assay chip. The instrument includes an excitation light source for exciting the sample in each sample well; a plurality of sensors corresponding the sample wells. Each sensor may detect emission energy from a sample in a respective sample well. The instrument includes at least one optical element that directs the emission energy from each sample well towards a respective sensor of the plurality of sensors.
    Type: Application
    Filed: February 18, 2022
    Publication date: June 2, 2022
    Applicant: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Ali Kabiri, Jason W. Sickler, Brett J. Gyarfas, Jeremy Lackey, Gerard Schmid, Benjamin Cipriany, Jack Jewell, Lawrence C. West, Michael Ferrigno, Paul E. Glenn, Adam Ezra Cohen, Anthony Bellofiore
  • Patent number: 11344200
    Abstract: A method of luminance lifetime imaging includes receiving incident photons at an integrated photodetector from luminescent molecules. The incident photons being received through one or more optical components of a point-of-care device. The method also includes detecting arrival times of the incident photons using the integrated photodetector. A method of analyzing blood glucose includes detecting luminance lifetime characteristics of tissue using, at least in part, an integrated circuit that detects arrival times of incident photons from the tissue. The method also includes analyzing blood glucose based upon the luminance lifetime characteristics.
    Type: Grant
    Filed: August 26, 2019
    Date of Patent: May 31, 2022
    Assignee: Tesseract Health, Inc.
    Inventors: Jonathan M. Rothberg, Keith G. Fife, David M. Boisvert
  • Publication number: 20220155229
    Abstract: An integrated circuit includes a photodetection region configured to receive incident photons. The photodetection region is configured to produce a plurality of charge carriers in response to the incident photons. The integrated circuit also includes at least one charge carrier storage region. The integrated circuit also includes a charge carrier segregation structure configured to selectively direct charge carriers of the plurality of charge carriers into the at least one charge carrier storage region based upon times at which the charge carriers are produced.
    Type: Application
    Filed: November 23, 2021
    Publication date: May 19, 2022
    Applicant: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Keith G. Fife, David M. Boisvert
  • Publication number: 20220146508
    Abstract: Provided herein, in some embodiments, are rapid diagnostic tests to detect one or more target nucleic acid sequences (e.g., a nucleic acid sequence of one or more pathogens). In some embodiments, the pathogens are viral, bacterial, fungal, parasitic, or protozoan pathogens, such as SARS-CoV-2 or an influenza virus. Further embodiments provide methods of detecting genetic abnormalities. Diagnostic tests comprising a sample-collecting component, one or more reagents (e.g., lysis reagents, nucleic acid amplification reagents), and a detection component (e.g., a component comprising a lateral flow assay strip and/or a colorimetric assay) are provided.
    Type: Application
    Filed: November 4, 2021
    Publication date: May 12, 2022
    Applicant: Detect, Inc.
    Inventors: Todd Roswech, Jonathan M. Rothberg, Isaac Bean, Monica Florence Caravias, Matthew Dyer
  • Publication number: 20220139496
    Abstract: The present disclosure provides methods, compositions, kits, and systems for identifying recombinases and cognate site-specific recombinase recognition sites as well as method for using the identified recombinase/recognition site pairs.
    Type: Application
    Filed: November 18, 2021
    Publication date: May 5, 2022
    Applicant: Protein Evolution Inc.
    Inventors: Henry Kemble, Spencer Glantz, Jonathan M. Rothberg
  • Publication number: 20220133274
    Abstract: To implement a single-chip ultrasonic imaging solution, on-chip signal processing may be employed in the receive signal path to reduce data bandwidth and a high-speed serial data module may be used to move data for all received channels off-chip as digital data stream. The digitization of received signals on-chip allows advanced digital signal processing to be performed on-chip, and thus permits the full integration of an entire ultrasonic imaging system on a single semiconductor substrate. Various novel waveform generation techniques, transducer configuration and biasing methodologies, etc., are likewise disclosed. HIFU methods may additionally or alternatively be employed as a component of the “ultrasound-on-a-chip” solution disclosed herein.
    Type: Application
    Filed: January 18, 2022
    Publication date: May 5, 2022
    Applicant: BFLY Operations, Inc.
    Inventors: Jonathan M. Rothberg, Keith G. Fife, Tyler S. Ralston, Gregory L. Charvat, Nevada J. Sanchez
  • Patent number: 11322906
    Abstract: Apparatus and methods for producing ultrashort optical pulses are described. A high-power, solid-state, passively mode-locked laser can be manufactured in a compact module that can be incorporated into a portable instrument. The mode-locked laser can produce sub-50-ps optical pulses at a repetition rates between 200 MHz and 50 MHz, rates suitable for massively parallel data-acquisition. The optical pulses can be used to generate a reference clock signal for synchronizing data-acquisition and signal-processing electronics of the portable instrument.
    Type: Grant
    Filed: June 30, 2020
    Date of Patent: May 3, 2022
    Assignee: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Jason W. Sickler, Lawrence C. West, Faisal R. Ahmad, Paul E. Glenn, Jack Jewell, John Glenn, Jose Camara, Jeremy Christopher Jordan, Todd Rearick, Farshid Ghasemi, Jonathan C. Schultz, Keith G. Fife, Benjamin Cipriany
  • Publication number: 20220128828
    Abstract: Apparatus and methods for coupling an optical beam from an optical source to a hi-tech system are described. A compact, low-cost beam-shaping and steering assembly may be located between the optical source and hi-tech system and provide automated adjustments to beam parameters such as beam position, beam rotation, and beam incident angles. The beam-shaping and steering assembly may be used to couple an elongated beam to a plurality of optical waveguides.
    Type: Application
    Filed: December 31, 2021
    Publication date: April 28, 2022
    Applicant: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Paul E. Glenn, Jonathan C. Schultz, Benjamin Cipriany
  • Patent number: D950732
    Type: Grant
    Filed: December 12, 2019
    Date of Patent: May 3, 2022
    Assignee: Tesseract Health, Inc.
    Inventors: Lawrence C. West, Maurizio Arienzo, Owen Kaye-Kauderer, Tyler S. Ralston, Benjamin Rosenbluth, Jonathan M. Rothberg, Jacob Coumans, Christopher Thomas McNulty
  • Patent number: D950733
    Type: Grant
    Filed: December 12, 2019
    Date of Patent: May 3, 2022
    Assignee: Tesseract Health, Inc.
    Inventors: Lawrence C. West, Maurizio Arienzo, Owen Kaye-Kauderer, Tyler S. Ralston, Benjamin Rosenbluth, Jonathan M. Rothberg, Jacob Coumans, Christopher Thomas McNulty
  • Patent number: D953535
    Type: Grant
    Filed: December 12, 2019
    Date of Patent: May 31, 2022
    Assignee: Tesseract Health, Inc.
    Inventors: Lawrence C. West, Maurizio Arienzo, Owen Kaye-Kauderer, Tyler S. Ralston, Benjamin Rosenbluth, Jonathan M. Rothberg, Jacob Coumans, Christopher Thomas McNulty