Patents by Inventor Jonathan M. Rothberg

Jonathan M. Rothberg has filed for patents to protect the following inventions. This listing includes patent applications that are pending as well as patents that have already been granted by the United States Patent and Trademark Office (USPTO).

  • Publication number: 20230079579
    Abstract: A hand-held ultrasound device, for placement on a subject, includes a semiconductor device and a housing to support the semiconductor device. The semiconductor device includes: a plurality of ultrasonic transducer elements; a plurality of pulsers coupled to the plurality of ultrasonic transducer elements; a plurality of waveform generators configured to drive the plurality of pulsers; receive processing circuitry configured to process ultrasound signals received by the plurality of ultrasonic transducer elements; and a plurality of independently controllable registers configured to store a plurality of different parameters for the waveform generators.
    Type: Application
    Filed: August 18, 2022
    Publication date: March 16, 2023
    Applicant: BFLY Operations, Inc.
    Inventors: Jonathan M. Rothberg, Keith G. Fife, Tyler S. Ralston, Gregory L. Charvat, Nevada J. Sanchez
  • Publication number: 20230069069
    Abstract: Provided are compositions and methods related to the use of apilimod in combination with glutamatergic agents for treating neurological diseases and disorders, and for the treatment of cancer.
    Type: Application
    Filed: July 12, 2022
    Publication date: March 2, 2023
    Applicant: AI Therapeutics, Inc.
    Inventors: Henri Lichenstein, Sean Landrette, Peter Ronald Young, Jonathan M. Rothberg
  • Publication number: 20230058852
    Abstract: Compositions comprising modified recombinant polymerizing enzymes are provided, along with nucleic acid molecules encoding the modified polymerizing enzymes. In some aspects, methods of using such polymerizing enzymes to synthesize a nucleic acid molecule or to sequence a nucleic acid template are provided.
    Type: Application
    Filed: March 9, 2022
    Publication date: February 23, 2023
    Applicant: Quantum-Si Incorporated
    Inventors: Brian Reed, Mohammad Wadud Bhuiya, Manjula Pandey, Jeremy Lackey, Jonathan M. Rothberg, Thomas Christian
  • Publication number: 20230039210
    Abstract: Techniques for performing a prediction task using a multi-modal statistical model configured to receive input data from multiple modalities including input data from a first modality and input data from a second modality different from the first modality.
    Type: Application
    Filed: October 17, 2022
    Publication date: February 9, 2023
    Applicant: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Umut Eser, Michael Meyer
  • Patent number: 11571711
    Abstract: A method of forming an ultrasonic transducer device includes forming an insulating layer having topographic features over a lower transducer electrode layer of a substrate; forming a conformal, anti-stiction layer over the insulating layer such that the conformal layer also has the topographic features; defining a cavity in a support layer formed over the anti-stiction layer; and bonding a membrane to the support layer.
    Type: Grant
    Filed: November 14, 2019
    Date of Patent: February 7, 2023
    Assignee: BFLY OPERATIONS, INC.
    Inventors: Lingyun Miao, Keith G. Fife, Jianwei Liu, Jonathan M. Rothberg
  • Patent number: 11564657
    Abstract: Aspects of the technology described herein relate to techniques for guiding an operator to use an ultrasound device. Thereby, operators with little or no experience operating ultrasound devices may capture medically relevant ultrasound images and/or interpret the contents of the obtained ultrasound images. For example, some of the techniques disclosed herein may be used to identify a particular anatomical view of a subject to image with an ultrasound device, guide an operator of the ultrasound device to capture an ultrasound image of the subject that contains the particular anatomical view, and/or analyze the captured ultrasound image to identify medical information about the subject.
    Type: Grant
    Filed: May 25, 2021
    Date of Patent: January 31, 2023
    Assignee: BFLY OPERATIONS, INC.
    Inventors: Matthew de Jonge, Robert Schneider, David Elgena, Alex Rothberg, Jonathan M. Rothberg, Michal Sofka, Tomer Gafner, Karl Thiele, Abraham Neben
  • Patent number: 11567006
    Abstract: Compact optical sources and methods for producing short and ultrashort optical pulses are described. A semiconductor laser or LED may be driven with a bipolar waveform to generate optical pulses with FWHM durations as short as approximately 85 ps having suppressed tail emission. The pulsed optical sources may be used for fluorescent lifetime analysis of biological samples and time-of-flight imaging, among other applications.
    Type: Grant
    Filed: January 23, 2020
    Date of Patent: January 31, 2023
    Assignee: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Jason W. Sickler, Lawrence C. West, Faisal R. Ahmad, Brendan Huang, Paul E. Glenn, Jonathan C. Schultz, Jose Camara
  • Publication number: 20230000472
    Abstract: To implement a single-chip ultrasonic imaging solution, on-chip signal processing may be employed in the receive signal path to reduce data bandwidth and an output data module may be used to move data for all received channels off-chip as a digital data stream. The digitization of received signals on-chip allows advanced digital signal processing to be performed on-chip, and thus permits the full integration of an entire ultrasonic imaging system on a single semiconductor substrate. The on-chip digitization of received signals also enables the on-chip integration of ultrasound processing and/or pre-processing to reduce the burden on off-chip computing. Data compression architectures are disclosed to facilitate the transfer of data off-chip as a digital data stream in accordance with the bandwidth requirements of standard commercially-available output interfaces.
    Type: Application
    Filed: June 15, 2022
    Publication date: January 5, 2023
    Applicant: BFLY Operations, Inc.
    Inventors: Jonathan M. Rothberg, Tyler S. Ralston, Nevada J. Sanchez, Andrew J. Casper
  • Patent number: 11540808
    Abstract: Aspects of the technology described herein relate to techniques for guiding an operator to use an ultrasound device. Thereby, operators with little or no experience operating ultrasound devices may capture medically relevant ultrasound images and/or interpret the contents of the obtained ultrasound images. For example, some of the techniques disclosed herein may be used to identify a particular anatomical view of a subject to image with an ultrasound device, guide an operator of the ultrasound device to capture an ultrasound image of the subject that contains the particular anatomical view, and/or analyze the captured ultrasound image to identify medical information about the subject.
    Type: Grant
    Filed: June 19, 2017
    Date of Patent: January 3, 2023
    Assignee: BFLY Operations, Inc.
    Inventors: Daniel Nouri, Alex Rothberg, Matthew de Jonge, Jimmy Jia, Jonathan M. Rothberg, Michal Sofka, David Elgena, Mark Michalski, Tomer Gafner, Abraham Neben
  • Patent number: 11540805
    Abstract: A system comprising a multi-modal ultrasound probe configured to operate in a plurality of operating modes associated with a respective plurality of configuration profiles; and a computing device coupled to the handheld multi-modal ultrasound probe and configured to, in response to receiving input indicating an operating mode selected by a user, cause the multi-modal ultrasound probe to operate in the selected operating mode.
    Type: Grant
    Filed: July 26, 2022
    Date of Patent: January 3, 2023
    Assignee: BFLY OPERATIONS, INC.
    Inventors: Jonathan M. Rothberg, Susan A. Alie, Nevada J. Sanchez, Tyler S. Ralston, Christopher Thomas McNulty, Jaime Scott Zahorian, Paul Francis Cristman, Matthew de Jonge, Keith G. Fife
  • Patent number: 11538556
    Abstract: A method includes obtaining, from one or more sequencing devices, raw data detected from luminescent labels associated with nucleotides during nucleotide incorporation events; and processing the raw data to perform a comparison of base calls produced by a learning enabled, automatic base calling module of the one or more sequencing devices with actual values associated with the raw data, wherein the base calls identify one or more individual nucleotides from the raw data. Based on the comparison, an update to the learning enabled, automatic base calling module is created using at least some of the obtained raw data, and the update is made available to the one or more sequencing devices.
    Type: Grant
    Filed: January 25, 2019
    Date of Patent: December 27, 2022
    Assignee: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Michael Meyer, Umut Eser
  • Patent number: 11530444
    Abstract: Methods and apparatus relating to very large scale FET arrays for analyte measurements. ChemFET (e.g., ISFET) arrays may be fabricated using conventional CMOS processing techniques based on improved FET pixel and array designs that increase measurement sensitivity and accuracy, and at the same time facilitate significantly small pixel sizes and dense arrays. Improved array control techniques provide for rapid data acquisition from large and dense arrays. Such arrays may be employed to detect a presence and/or concentration changes of various analyte types in a wide variety of chemical and/or biological processes. In one example, chemFET arrays facilitate DNA sequencing techniques based on monitoring changes in the concentration of inorganic pyrophosphate (PPi), hydrogen ions, and nucleotide triphosphates.
    Type: Grant
    Filed: May 22, 2020
    Date of Patent: December 20, 2022
    Assignee: Life Technologies Corporation
    Inventors: Jonathan M. Rothberg, Wolfgang Hinz, Kim L. Johnson, James Bustillo, John Leamon, Jonathan Schultz
  • Publication number: 20220383482
    Abstract: Aspects of the technology described herein relate to techniques for calculating, during imaging, a quality of a sequence of images collected during the imaging. Calculating the quality of the sequence of images may include calculating a probability that a medical professional would use a given image for clinical evaluation and a confidence that an automated analysis segmentation performed on the given image is correct. Techniques described herein also include receiving a trigger to perform an automatic measurement on a sequence of images, calculating a quality of the sequence of images, determining whether the quality of the sequence of images exceeds a threshold quality, and performing the automatic measurement on the sequence of images based on determining that the quality of the sequence of images exceeds the threshold quality.
    Type: Application
    Filed: August 12, 2022
    Publication date: December 1, 2022
    Applicant: BFLY Operations, Inc.
    Inventors: Alex Rothberg, Igor Lovchinsky, Jimmy Jia, Tomer Gafner, Matthew de Jonge, Jonathan M. Rothberg
  • Publication number: 20220364996
    Abstract: Apparatus and methods for analyzing single molecule and performing nucleic acid sequencing. An integrated device includes multiple pixels with sample wells configured to receive a sample, which, when excited, emits radiation; at least one element for directing the emission radiation in a particular direction; and a light path along which the emission radiation travels from the sample well toward a sensor. The apparatus also includes an instrument that interfaces with the integrated device. Each sensor may detect emission radiation from a sample in a respective sample well. The instrument includes an excitation light source for exciting the sample in each sample well.
    Type: Application
    Filed: July 29, 2022
    Publication date: November 17, 2022
    Applicant: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Ali Kabiri, Jason W. Sickler, Brett J. Gyartas, Jeremy Lackey, Gerard Schmid, Benjamin Cipriany, Jack Jewell, Lawrence C. West, Michael Ferrigno, Paul E. Glenn, Anthony Bellofiore
  • Patent number: 11501562
    Abstract: An electronic face-identification device, which performs face scanning with ultrasonic waves, includes a housing and an ultrasound device disposed within the housing. The ultrasound device may be configured to transmit ultrasonic waves through air to a face and scan the face with the ultrasonic waves, to receive reflected waves through the air corresponding to reflections of the ultrasonic waves from the face, and to perform a recognition process for the face based on reflections of the ultrasonic waves from the face. The ultrasound device may include a plurality of ultrasound transducers, and electronic circuitry configured to transmit signals to the ultrasound transducers and receive signals from the ultrasound transducers. The face-identification device may be incorporated into various electronic equipment, such as hand-held equipment in the form of smartphones and tablet computers, as well as in larger scale installations at airports, workplace entryways, and the like.
    Type: Grant
    Filed: April 27, 2020
    Date of Patent: November 15, 2022
    Assignee: BFLY OPERATIONS, INC.
    Inventors: Tyler S. Ralston, Jonathan M. Rothberg, Jianwei Liu
  • Patent number: 11499938
    Abstract: In one embodiment, a device is described. The device includes a material defining a reaction region. The device also includes a plurality of chemically-sensitive field effect transistors have a common floating gate in communication with the reaction region. The device also includes a circuit to obtain respective output signals from the chemically-sensitive field effect transistors indicating an analyte within the reaction region.
    Type: Grant
    Filed: October 14, 2020
    Date of Patent: November 15, 2022
    Assignee: Life Technologies Corporation
    Inventors: Jonathan M. Rothberg, Keith G Fife, Jordan Owens, James Bustillo
  • Publication number: 20220354459
    Abstract: A system comprising a multi-modal ultrasound probe configured to operate in a plurality of operating modes associated with a respective plurality of configuration profiles; and a computing device coupled to the handheld multi-modal ultrasound probe and configured to, in response to receiving input indicating an operating mode selected by a user, cause the multi-modal ultrasound probe to operate in the selected operating mode.
    Type: Application
    Filed: July 26, 2022
    Publication date: November 10, 2022
    Applicant: BFLY Operations, Inc.
    Inventors: Jonathan M. Rothberg, Susan A. Alie, Nevada J. Sanchez, Tyler S. Ralston, Christopher Thomas McNulty, James Scott Zahorian, Paul Francis Cristman, Matthew de Jonge, Keith G. Fife
  • Publication number: 20220356518
    Abstract: Methods and compositions for preparing nucleic acid libraries for nucleic acid sequencing are provided. In some embodiments, disclosed herein is a universal nucleic acid adaptor and methods of using same.
    Type: Application
    Filed: April 29, 2022
    Publication date: November 10, 2022
    Applicant: Quantum-Si Incorporated
    Inventors: Jeffrey Sabina, Jonathan M. Rothberg, John H. Leamon
  • Patent number: 11491143
    Abstract: The present invention relates to methods and compositions for the treatment and prophylaxis of pulmonary arterial hypertension (PAH) in a human subject in need of such treatment, the methods comprising the pulmonary administration to the subject, preferably via inhalation of a composition comprising rapamycin or a prodrug or derivative thereof.
    Type: Grant
    Filed: December 27, 2019
    Date of Patent: November 8, 2022
    Assignee: AI Therapeutics, Inc.
    Inventors: Thomas Armer, Lawrence S. Melvin, Jr., Jonathan M. Rothberg, Henri Lichenstein
  • Patent number: 11494589
    Abstract: Techniques for performing a prediction task using a multi-modal statistical model configured to receive input data from multiple modalities including input data from a first modality and input data from a second modality different from the first modality.
    Type: Grant
    Filed: March 8, 2021
    Date of Patent: November 8, 2022
    Assignee: Quantum-Si Incorporated
    Inventors: Jonathan M. Rothberg, Umut Eser, Michael Meyer